PI0021529 (gene) Melon (PI 482460) v1

Overview
NamePI0021529
Typegene
OrganismCucumis metuliferus (Melon (PI 482460) v1)
DescriptionUnknown protein
Locationchr01: 6314005 .. 6314504 (+)
RNA-Seq ExpressionPI0021529
SyntenyPI0021529
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AAAATTTGTACTATCGATCTTCAAGTTGAGAAATTTATTGTATCTACATTTTTTCCATCAGTTATGGGTATCTCCAAGAAAAACATGTTCGTTTTTGTTGGTGTTCTTCTTATTAGCACAACTCTAATTGAAATTACAAAAGCAACGACAAAAACCATAAATAATGGTGCTCCTCAAGGTGCGGAGATTGTATGTAGCCCAGAAGATCCAAGAGTTTTCAAACTACATTATGCAAATGATGAATCAAGTGAATATAAGTCACTTGATTATTGCAGAACTATAAAACATAACATCAATGGTGATGGATTGCAAAATGTGGCTCCTCAAAGCTCACAAGAAATCAAAGGAGATAAAAATACTGTTGCTCCTTTACCATATAGGAATTAAATTCATGTGTGTGGAAAATTCTTTTTCTTTTCTTCTTTTTTTTTTCTTTTTTTTTTTTTCTTTTTTTAATGTTTTGTTCTTTCATATGAATTGCAATCTCACAAACTTAAATA

mRNA sequence

AAAATTTGTACTATCGATCTTCAAGTTGAGAAATTTATTGTATCTACATTTTTTCCATCAGTTATGGGTATCTCCAAGAAAAACATGTTCGTTTTTGTTGGTGTTCTTCTTATTAGCACAACTCTAATTGAAATTACAAAAGCAACGACAAAAACCATAAATAATGGTGCTCCTCAAGGTGCGGAGATTGTATGTAGCCCAGAAGATCCAAGAGTTTTCAAACTACATTATGCAAATGATGAATCAAGTGAATATAAGTCACTTGATTATTGCAGAACTATAAAACATAACATCAATGGTGATGGATTGCAAAATGTGGCTCCTCAAAGCTCACAAGAAATCAAAGGAGATAAAAATACTGTTGCTCCTTTACCATATAGGAATTAAATTCATGTGTGTGGAAAATTCTTTTTCTTTTCTTCTTTTTTTTTTCTTTTTTTTTTTTTCTTTTTTTAATGTTTTGTTCTTTCATATGAATTGCAATCTCACAAACTTAAATA

Coding sequence (CDS)

ATGGGTATCTCCAAGAAAAACATGTTCGTTTTTGTTGGTGTTCTTCTTATTAGCACAACTCTAATTGAAATTACAAAAGCAACGACAAAAACCATAAATAATGGTGCTCCTCAAGGTGCGGAGATTGTATGTAGCCCAGAAGATCCAAGAGTTTTCAAACTACATTATGCAAATGATGAATCAAGTGAATATAAGTCACTTGATTATTGCAGAACTATAAAACATAACATCAATGGTGATGGATTGCAAAATGTGGCTCCTCAAAGCTCACAAGAAATCAAAGGAGATAAAAATACTGTTGCTCCTTTACCATATAGGAATTAA

Protein sequence

MGISKKNMFVFVGVLLISTTLIEITKATTKTINNGAPQGAEIVCSPEDPRVFKLHYANDESSEYKSLDYCRTIKHNINGDGLQNVAPQSSQEIKGDKNTVAPLPYRN
Homology
BLAST of PI0021529 vs. ExPASy TrEMBL
Match: A0A0A0K4C8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G269040 PE=4 SV=1)

HSP 1 Score: 138.7 bits (348), Expect = 1.5e-29
Identity = 71/101 (70.30%), Postives = 82/101 (81.19%), Query Frame = 0

Query: 1   MGISKKNMFVFVGVLLISTTLIEITKATTKTINNGAPQGAEIVCSPEDPRVFKLHYANDE 60
           M I+KKNMFVFVG+LLISTTLIEITKATT+++N GAPQG EIVCSPEDPRVF+LHYANDE
Sbjct: 1   MDITKKNMFVFVGLLLISTTLIEITKATTRSMNYGAPQGVEIVCSPEDPRVFRLHYANDE 60

Query: 61  SSEYKSLDYCRTIKHNINGDG----------LQNVAPQSSQ 92
           SSEY ++D C T+K N+N DG           QNVAPQ+SQ
Sbjct: 61  SSEYNAVDDCATLKSNLNFDGRSQNVPAQSPSQNVAPQTSQ 101

BLAST of PI0021529 vs. ExPASy TrEMBL
Match: A0A5D3BWB1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold2392G00270 PE=4 SV=1)

HSP 1 Score: 137.5 bits (345), Expect = 3.3e-29
Identity = 72/113 (63.72%), Postives = 81/113 (71.68%), Query Frame = 0

Query: 8   MFVFVGVLLISTTLIEITKATTKTINNGAPQGAEIVCSPEDPRVFKLHYANDESSEYKSL 67
           M V VGVLLISTTLIEITKAT++ +N GAPQG EIVCSPEDPRVFKLHYANDESSE+ ++
Sbjct: 1   MVVLVGVLLISTTLIEITKATSRIVNYGAPQGVEIVCSPEDPRVFKLHYANDESSEFNAV 60

Query: 68  DYCRTIKHNINGDGLQ---------------NVAPQSSQEIKGDKNTVAPLPY 106
           D C+T+  N+N  G                 NVAPQSSQE KG KN V PLPY
Sbjct: 61  DDCKTLNRNLNFGGRSQDVTPQSPNVAPQSPNVAPQSSQETKGVKNVVTPLPY 113

BLAST of PI0021529 vs. ExPASy TrEMBL
Match: A0A0A0K7P8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G269030 PE=4 SV=1)

HSP 1 Score: 127.1 bits (318), Expect = 4.4e-26
Identity = 69/94 (73.40%), Postives = 75/94 (79.79%), Query Frame = 0

Query: 1  MGISKKNMFVFVGVLLISTTLIEITKATTKTINNGAP--QGAEIVCSPEDPRVFKLHYAN 60
          MGISKKNM VFVGVLLISTTLIEITKATT    +  P  QG EIVCSPEDPRVFKLHYAN
Sbjct: 1  MGISKKNMLVFVGVLLISTTLIEITKATTTRTRDYGPLDQGVEIVCSPEDPRVFKLHYAN 60

Query: 61 DESSEYKSLDYCRTIKHNINGDGLQ-NVAPQSSQ 92
          DESSEY S+D C+T+K   N +G   N+APQSSQ
Sbjct: 61 DESSEYNSVDDCKTLKSKTNFNGQSPNMAPQSSQ 94

BLAST of PI0021529 vs. ExPASy TrEMBL
Match: A0A0A0K605 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G269050 PE=4 SV=1)

HSP 1 Score: 55.1 bits (131), Expect = 2.1e-04
Identity = 37/104 (35.58%), Postives = 56/104 (53.85%), Query Frame = 0

Query: 1   MGISKKNMFVFVGVLLISTTLIEITKATTKTINNGAPQGAEIVCSPEDPRV-FKL-HYAN 60
           M +SKKNM VF+G+LL S   +EI  A             ++VC P    + F+L   A 
Sbjct: 1   MVVSKKNMAVFIGILLFSINFVEIASAARPIKRRSYGDNTKVVCGPPRRSIDFELDDDAQ 60

Query: 61  DESSEYKSLDYCRTI---KHNINGDGLQNVAP-QSSQEIKGDKN 99
             +S Y ++  C+++   KH+INGD + N     +SQ +KGDK+
Sbjct: 61  KYASWYNTVYPCKSLRKAKHSINGDKVGNTFDVNTSQNVKGDKD 104

BLAST of PI0021529 vs. NCBI nr
Match: KAA0036627.1 (hypothetical protein E6C27_scaffold191G001550 [Cucumis melo var. makuwa] >TYK03365.1 hypothetical protein E5676_scaffold2392G00270 [Cucumis melo var. makuwa])

HSP 1 Score: 137.5 bits (345), Expect = 6.7e-29
Identity = 72/113 (63.72%), Postives = 81/113 (71.68%), Query Frame = 0

Query: 8   MFVFVGVLLISTTLIEITKATTKTINNGAPQGAEIVCSPEDPRVFKLHYANDESSEYKSL 67
           M V VGVLLISTTLIEITKAT++ +N GAPQG EIVCSPEDPRVFKLHYANDESSE+ ++
Sbjct: 1   MVVLVGVLLISTTLIEITKATSRIVNYGAPQGVEIVCSPEDPRVFKLHYANDESSEFNAV 60

Query: 68  DYCRTIKHNINGDGLQ---------------NVAPQSSQEIKGDKNTVAPLPY 106
           D C+T+  N+N  G                 NVAPQSSQE KG KN V PLPY
Sbjct: 61  DDCKTLNRNLNFGGRSQDVTPQSPNVAPQSPNVAPQSSQETKGVKNVVTPLPY 113

BLAST of PI0021529 vs. NCBI nr
Match: KAE8646139.1 (hypothetical protein Csa_016560, partial [Cucumis sativus])

HSP 1 Score: 127.1 bits (318), Expect = 9.1e-26
Identity = 69/94 (73.40%), Postives = 75/94 (79.79%), Query Frame = 0

Query: 1   MGISKKNMFVFVGVLLISTTLIEITKATTKTINNGAP--QGAEIVCSPEDPRVFKLHYAN 60
           MGISKKNM VFVGVLLISTTLIEITKATT    +  P  QG EIVCSPEDPRVFKLHYAN
Sbjct: 25  MGISKKNMLVFVGVLLISTTLIEITKATTTRTRDYGPLDQGVEIVCSPEDPRVFKLHYAN 84

Query: 61  DESSEYKSLDYCRTIKHNINGDGLQ-NVAPQSSQ 92
           DESSEY S+D C+T+K   N +G   N+APQSSQ
Sbjct: 85  DESSEYNSVDDCKTLKSKTNFNGQSPNMAPQSSQ 118

BLAST of PI0021529 vs. NCBI nr
Match: KGN44636.2 (hypothetical protein Csa_016656 [Cucumis sativus])

HSP 1 Score: 55.1 bits (131), Expect = 4.4e-04
Identity = 37/104 (35.58%), Postives = 56/104 (53.85%), Query Frame = 0

Query: 1   MGISKKNMFVFVGVLLISTTLIEITKATTKTINNGAPQGAEIVCSPEDPRV-FKL-HYAN 60
           M +SKKNM VF+G+LL S   +EI  A             ++VC P    + F+L   A 
Sbjct: 1   MVVSKKNMAVFIGILLFSINFVEIASAARPIKRRSYGDNTKVVCGPPRRSIDFELDDDAQ 60

Query: 61  DESSEYKSLDYCRTI---KHNINGDGLQNVAP-QSSQEIKGDKN 99
             +S Y ++  C+++   KH+INGD + N     +SQ +KGDK+
Sbjct: 61  KYASWYNTVYPCKSLRKAKHSINGDKVGNTFDVNTSQNVKGDKD 104

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0K4C81.5e-2970.30Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G269040 PE=4 SV=1[more]
A0A5D3BWB13.3e-2963.72Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A0A0K7P84.4e-2673.40Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G269030 PE=4 SV=1[more]
A0A0A0K6052.1e-0435.58Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G269050 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
KAA0036627.16.7e-2963.72hypothetical protein E6C27_scaffold191G001550 [Cucumis melo var. makuwa] >TYK033... [more]
KAE8646139.19.1e-2673.40hypothetical protein Csa_016560, partial [Cucumis sativus][more]
KGN44636.24.4e-0435.58hypothetical protein Csa_016656 [Cucumis sativus][more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 81..96
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 81..107

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
PI0021529.1PI0021529.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009987 cellular process