PI0021477 (gene) Melon (PI 482460) v1

Overview


Name	PI0021477
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	Mediator of RNA polymerase II transcription subunit 12-like isoform X1
Location	chr12: 18715803 .. 18716758 (-)
RNA-Seq Expression	PI0021477
Synteny	PI0021477

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAATAGTTTGCCGAATTTCTGTACGAACGGTCACGACATATGGCAGACAATTAATCCTCTCATATGTTTTCACATCGGTGAGTGGTATCATCCTGACAGAACACTCAGACAGTTTGGTACTAAACAAGATGTTCCAGTTGACTGTAATACTGAACCATTGTTGCATAACATTGAATTGAGAATGACTGATTGGTCTGATAGAGTTGCCCATTTGGTGATGCGATGACTAAGTTGCAGAAGATTTATTATTATGGGACCTTCAATTAGACAATTTGATATTGATGTAACTCGAGAATACATCAATTGGTACAAAAATATTACTAGGCTCTATATCACTTGACCGGGAATTGTTATGGGTCATCTAGTACATATTTAAATATTGTCTAATTGTTTTTAGTACAAACTTATTTTGAATAGTTTCTAATTAATTTTAATATTTCACATAGGTTGAATAATAGTAGACTTCGGGATGTTGTAGATGATCCACAACAGGTCCTAGATATATGCAACAATAACGAGCGGTACATGCAGAACATACACTATATGTACGATGTACCTATTGTACCTGCACCAATTCAAAGGAGACGTGTTTGAGTGCAAGAGCCTAATGAATTGGAAGAAGTTGAACAACACGTGGAAGAAGTGCCTCCTATGAGACAAACACAGAGCGAGACTGGTGATGTTAGTCCAATGATGATGATGCCGACATTTGGAACAGGATATTATGACTCAGGAGTCGGTCAATCGTTAGACTTCGGGACAGAGTATTATAAATCAGAGGCAGGTTCATCATCGTCAAACTTTGGACAAGAATACTACGATTTAGGGACAAATTCACCATCTTCATACATGCATGGACATGGACGTGGATGGGAGAACATAACGAATATTTGTACTATGAAGCGTCTGCAGCGGTACTCGAGCAGCAACAACAAGAGAATTAGGAGGGACTAG

mRNA sequence

ATGAATAGTTTGCCGAATTTCTGTACGAACGGTCACGACATATGGCAGACAATTAATCCTCTCATATGTTTTCACATCGGTGAGTGGTATCATCCTGACAGAACACTCAGACAGTTTGGTACTAAACAAGATGTTCCAGTTGACTGTAATACTGAACCATTGTTGCATAACATTGAATTGAGAATGACTGATTGGTTGAATAATAGTAGACTTCGGGATGTTGTAGATGATCCACAACAGGTCCTAGATATATGCAACAATAACGAGCGGTACATGCAGAACATACACTATATGTACGATGTACCTATTGTACCTGCACCAATTCAAAGGAGACAGCCTAATGAATTGGAAGAAGTTGAACAACACGTGGAAGAAGTGCCTCCTATGAGACAAACACAGAGCGAGACTGGTGATGTTAGTCCAATGATGATGATGCCGACATTTGGAACAGGATATTATGACTCAGGAGTCGGTCAATCGTTAGACTTCGGGACAGAGTATTATAAATCAGAGGCAGGTTCATCATCGTCAAACTTTGGACAAGAATACTACGATTTAGGGACAAATTCACCATCTTCATACATGCATGGACATGGACGTGGATGGGAGAACATAACGAATATTTGTACTATGAAGCGTCTGCAGCGGTACTCGAGCAGCAACAACAAGAGAATTAGGAGGGACTAG

Coding sequence (CDS)

ATGAATAGTTTGCCGAATTTCTGTACGAACGGTCACGACATATGGCAGACAATTAATCCTCTCATATGTTTTCACATCGGTGAGTGGTATCATCCTGACAGAACACTCAGACAGTTTGGTACTAAACAAGATGTTCCAGTTGACTGTAATACTGAACCATTGTTGCATAACATTGAATTGAGAATGACTGATTGGTTGAATAATAGTAGACTTCGGGATGTTGTAGATGATCCACAACAGGTCCTAGATATATGCAACAATAACGAGCGGTACATGCAGAACATACACTATATGTACGATGTACCTATTGTACCTGCACCAATTCAAAGGAGACAGCCTAATGAATTGGAAGAAGTTGAACAACACGTGGAAGAAGTGCCTCCTATGAGACAAACACAGAGCGAGACTGGTGATGTTAGTCCAATGATGATGATGCCGACATTTGGAACAGGATATTATGACTCAGGAGTCGGTCAATCGTTAGACTTCGGGACAGAGTATTATAAATCAGAGGCAGGTTCATCATCGTCAAACTTTGGACAAGAATACTACGATTTAGGGACAAATTCACCATCTTCATACATGCATGGACATGGACGTGGATGGGAGAACATAACGAATATTTGTACTATGAAGCGTCTGCAGCGGTACTCGAGCAGCAACAACAAGAGAATTAGGAGGGACTAG

Protein sequence

MNSLPNFCTNGHDIWQTINPLICFHIGEWYHPDRTLRQFGTKQDVPVDCNTEPLLHNIELRMTDWLNNSRLRDVVDDPQQVLDICNNNERYMQNIHYMYDVPIVPAPIQRRQPNELEEVEQHVEEVPPMRQTQSETGDVSPMMMMPTFGTGYYDSGVGQSLDFGTEYYKSEAGSSSSNFGQEYYDLGTNSPSSYMHGHGRGWENITNICTMKRLQRYSSSNNKRIRRD

Homology

[Close]

BLAST of PI0021477 vs. ExPASy Swiss-Prot
Match: Q9LNG5 (Serine/threonine-protein phosphatase 7 long form homolog OS=Arabidopsis thaliana OX=3702 GN=MAIL3 PE=2 SV=1)

HSP 1 Score: 75.1 bits (183), Expect = 1.1e-12
Identity = 42/124 (33.87%), Postives = 64/124 (51.61%), Query Frame = 0


Query: 4   LPNFCTNGHDIWQTINPLICFHIGEWYHPDRTLRQFGTKQDVPVDCNTEPLLHNIELR-- 63
           +P  C +G +IW+T+ PLICF + EW+ PDR LRQFG  Q +P  C+ E  LH I+ R  
Sbjct: 332 IPLICVSGENIWRTVAPLICFDVVEWHRPDRVLRQFGLHQTIPAPCDNEKALHAIDKRGK 391

Query: 64  -MTDW---------LNNSRLRDVVDDPQQVLDICNNNERYMQNIHYMYDVPIVPAPIQRR 116
              DW         L  +R+  VV    +   + + N+ YM+   Y      + +P+  R
Sbjct: 392 SEYDWSARHSRHIGLWEARVSSVVSGEPECSPM-DYNDPYME--WYRRITRRIISPMNER 451

[Close]

BLAST of PI0021477 vs. ExPASy TrEMBL
Match: A0A5A7UKC7 (Serine/threonine-protein phosphatase 7 long form-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold222G001140 PE=4 SV=1)

HSP 1 Score: 308.1 bits (788), Expect = 3.0e-80
Identity = 152/237 (64.14%), Postives = 178/237 (75.11%), Query Frame = 0


Query: 1   MNSLPNFCTNGHDIWQTINPLICFHIGEWYHPDRTLRQFGTKQDVPVDCNTEPLLHNIEL 60
           ++SLP+FCTNGH+IW+TI+PLICF+IGEW+HPDR LRQFG +Q VP DCNTEPLLHNI+L
Sbjct: 477 IDSLPHFCTNGHNIWRTISPLICFYIGEWHHPDRVLRQFGIQQAVPRDCNTEPLLHNIDL 536

Query: 61  RMTDW-------------------------------LNNSRLRDVVDDPQQVLDICNNNE 120
           R  DW                                NN RL +V DDPQQVL+ICNNNE
Sbjct: 537 RTADWSDRVAHLVMRWHNRRSKLYITQPGAAMSHLRSNNIRLWNVADDPQQVLNICNNNE 596

Query: 121 RYMQNIHYMYDVPIVPAPIQRR-----QPNELEEVEQHVEEVPPMRQTQSETGDVSPMMM 180
           +YM+NIHYMYDVPIVPAP+QRR     +P++LEEV+QH EEVPPM QT+SE   VSP+MM
Sbjct: 597 QYMENIHYMYDVPIVPAPVQRRRPLVQEPDQLEEVDQHGEEVPPMTQTKSEHNYVSPVMM 656

Query: 181 MPTFGTGYYDSGVGQSLDFGTEYYKSEAGSSSSNFGQEYYDLGTNSPSSYMHGHGRG 202
           MPTFGT YYDSGVGQS DFG  YY SEAG SS++FGQ+YYDLG++  SSYMHGHGRG
Sbjct: 657 MPTFGTTYYDSGVGQSSDFGRGYYNSEAGQSSTDFGQQYYDLGSDPSSSYMHGHGRG 713

[Close]

BLAST of PI0021477 vs. ExPASy TrEMBL
Match: A0A5D3D5R5 (Mediator of RNA polymerase II transcription subunit 12-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold204G001010 PE=4 SV=1)

HSP 1 Score: 305.1 bits (780), Expect = 2.5e-79
Identity = 153/239 (64.02%), Postives = 178/239 (74.48%), Query Frame = 0


Query: 1   MNSLPNFCTNGHDIWQTINPLICFHIGEWYHPDRTLRQFGTKQDVPVDCNTEPLLHNIEL 60
           ++SLP+FCTNGHDIW+TI+PLICF+IGEW+HPDR LRQFG +Q VP DCNTEP LHNI+L
Sbjct: 19  IDSLPHFCTNGHDIWRTISPLICFYIGEWHHPDRVLRQFGIQQAVPRDCNTEPPLHNIDL 78

Query: 61  RMTDW-------------------------------LNNSRLRDVVDDPQQVLDICNNNE 120
           R  DW                                NN RLR+V DDPQQVL+ICN+NE
Sbjct: 79  RTADWSDKVAHLVMRWHNRRRFTATGPPIEQFDMDRSNNIRLRNVADDPQQVLNICNDNE 138

Query: 121 RYMQNIHYMYDVPIVPAPIQRR-----QPNELEEVEQHVEEVPPM--RQTQSETGDVSPM 180
           +YM+NIHYMYDVPIVPAP+QRR     +P++LEEV+QH EEVPPM   QTQSE   VSP+
Sbjct: 139 QYMENIHYMYDVPIVPAPVQRRRPLVQEPDQLEEVDQHGEEVPPMTQTQTQSEHNYVSPV 198

Query: 181 MMMPTFGTGYYDSGVGQSLDFGTEYYKSEAGSSSSNFGQEYYDLGTNSPSSYMHGHGRG 202
           MMMPTFGT YYDSGVGQS DFG  YY SEAG SS++FGQ+YYDLG++  SSYMHGHGRG
Sbjct: 199 MMMPTFGTTYYDSGVGQSSDFGRGYYNSEAGQSSTDFGQQYYDLGSDPSSSYMHGHGRG 257

[Close]

BLAST of PI0021477 vs. ExPASy TrEMBL
Match: A0A5A7U5S8 (Mediator of RNA polymerase II transcription subunit 12-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1250G00410 PE=4 SV=1)

HSP 1 Score: 303.9 bits (777), Expect = 5.6e-79
Identity = 153/239 (64.02%), Postives = 177/239 (74.06%), Query Frame = 0


Query: 1   MNSLPNFCTNGHDIWQTINPLICFHIGEWYHPDRTLRQFGTKQDVPVDCNTEPLLHNIEL 60
           ++SLP+FCTNGHDIWQTI+PLICF+IGEW+HPDR LRQFG +Q VP DCNTEP LHNI+L
Sbjct: 19  IDSLPHFCTNGHDIWQTISPLICFYIGEWHHPDRVLRQFGIQQAVPRDCNTEPPLHNIDL 78

Query: 61  RMTDW-------------------------------LNNSRLRDVVDDPQQVLDICNNNE 120
           R  DW                                NN RLR+V DDPQQVL+ICN+NE
Sbjct: 79  RTADWSDKVAHLVMRWHNRRRFTATGPPIEQFDMDRSNNIRLRNVADDPQQVLNICNDNE 138

Query: 121 RYMQNIHYMYDVPIVPAPIQRR-----QPNELEEVEQHVEEVPPM--RQTQSETGDVSPM 180
           +YM+NIHYMYDVPIVPAP+QRR     +P++LEEV+QH EEVPPM   QTQSE   VSP+
Sbjct: 139 QYMENIHYMYDVPIVPAPVQRRRPLVQEPDQLEEVDQHGEEVPPMTQTQTQSEHNYVSPV 198

Query: 181 MMMPTFGTGYYDSGVGQSLDFGTEYYKSEAGSSSSNFGQEYYDLGTNSPSSYMHGHGRG 202
           MMMPTFGT YYDSGVGQS DFG  YY SEAG SS++FGQ+YYDLG++  SSYMH HGRG
Sbjct: 199 MMMPTFGTTYYDSGVGQSSDFGRGYYNSEAGQSSTDFGQQYYDLGSDPSSSYMHDHGRG 257

[Close]

BLAST of PI0021477 vs. ExPASy TrEMBL
Match: A0A5A7VIP6 (Mediator of RNA polymerase II transcription subunit 12-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold38G001330 PE=4 SV=1)

HSP 1 Score: 297.4 bits (760), Expect = 5.3e-77
Identity = 152/264 (57.58%), Postives = 178/264 (67.42%), Query Frame = 0


Query: 1   MNSLPNFCTNGHDIWQTINPLICFHIGEWYHPDRTLRQFGTKQDVPVDCNTEPLLHNIEL 60
           ++SLP+FCTNGH+IW+TI+PLICF+IGEW+HPDR LRQFG +Q VP DCNTEPLLHNI+L
Sbjct: 293 IDSLPHFCTNGHNIWRTISPLICFYIGEWHHPDRVLRQFGIQQAVPRDCNTEPLLHNIDL 352

Query: 61  RMTDW------------------------------------------------------- 120
           R  DW                                                       
Sbjct: 353 RTADWSDRVAHLVMRWHNRRRFTATGPPIEQFDMDVTQEYINWYKNISKLYITQPGAVMS 412

Query: 121 ---LNNSRLRDVVDDPQQVLDICNNNERYMQNIHYMYDVPIVPAPIQRR-----QPNELE 180
               NN RLR+V DDPQQVL+ICN+NE+YM+NIHYMYDVPIVPAP+QRR     +P++LE
Sbjct: 413 HLRSNNIRLRNVADDPQQVLNICNDNEQYMENIHYMYDVPIVPAPVQRRRPLVQEPDQLE 472

Query: 181 EVEQHVEEVPPMRQTQSETGDVSPMMMMPTFGTGYYDSGVGQSLDFGTEYYKSEAGSSSS 202
           EV+QH EEVPPM QTQSE   VSP+MMMPTFGT YYDS VGQS DFG  YY SEAG SS+
Sbjct: 473 EVDQHGEEVPPMTQTQSEHNYVSPVMMMPTFGTTYYDSEVGQSSDFGRGYYNSEAGQSST 532

[Close]

BLAST of PI0021477 vs. ExPASy TrEMBL
Match: A0A5D3BAB0 (Serine/threonine-protein phosphatase 7 long form-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold110G001240 PE=4 SV=1)

HSP 1 Score: 297.4 bits (760), Expect = 5.3e-77
Identity = 151/264 (57.20%), Postives = 179/264 (67.80%), Query Frame = 0


Query: 1    MNSLPNFCTNGHDIWQTINPLICFHIGEWYHPDRTLRQFGTKQDVPVDCNTEPLLHNIEL 60
            ++SLP+FCTNGH+IW+TI+PLICF+IGEW+HPDR LRQFG +Q VP DCNTEPLLHNI+L
Sbjct: 941  IDSLPHFCTNGHNIWRTISPLICFYIGEWHHPDRVLRQFGIQQAVPRDCNTEPLLHNIDL 1000

Query: 61   RMTDW------------------------------------------------------- 120
            R  DW                                                       
Sbjct: 1001 RTADWSDRVAHLVMRWHNRRRFTATGPPIEQFDMDVTQEYIHWYKNISKLYITQPGAAMS 1060

Query: 121  ---LNNSRLRDVVDDPQQVLDICNNNERYMQNIHYMYDVPIVPAPIQRR-----QPNELE 180
                NN RLR+V DDPQQVL+ICN+NE+YM+NIHYMYDVPIVPAP+QRR     +P++LE
Sbjct: 1061 HLRSNNIRLRNVADDPQQVLNICNDNEQYMENIHYMYDVPIVPAPVQRRRPLVQEPDQLE 1120

Query: 181  EVEQHVEEVPPMRQTQSETGDVSPMMMMPTFGTGYYDSGVGQSLDFGTEYYKSEAGSSSS 202
            EV+QH +EVPPM QTQSE   VSP+MMMPTFGT YYDSGVGQS DFG  YY S+AG SS+
Sbjct: 1121 EVDQHGKEVPPMTQTQSEHNYVSPVMMMPTFGTTYYDSGVGQSSDFGRGYYNSKAGQSST 1180

[Close]

BLAST of PI0021477 vs. NCBI nr
Match: KAA0055624.1 (serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 308.1 bits (788), Expect = 6.1e-80
Identity = 152/237 (64.14%), Postives = 178/237 (75.11%), Query Frame = 0


Query: 1   MNSLPNFCTNGHDIWQTINPLICFHIGEWYHPDRTLRQFGTKQDVPVDCNTEPLLHNIEL 60
           ++SLP+FCTNGH+IW+TI+PLICF+IGEW+HPDR LRQFG +Q VP DCNTEPLLHNI+L
Sbjct: 477 IDSLPHFCTNGHNIWRTISPLICFYIGEWHHPDRVLRQFGIQQAVPRDCNTEPLLHNIDL 536

Query: 61  RMTDW-------------------------------LNNSRLRDVVDDPQQVLDICNNNE 120
           R  DW                                NN RL +V DDPQQVL+ICNNNE
Sbjct: 537 RTADWSDRVAHLVMRWHNRRSKLYITQPGAAMSHLRSNNIRLWNVADDPQQVLNICNNNE 596

Query: 121 RYMQNIHYMYDVPIVPAPIQRR-----QPNELEEVEQHVEEVPPMRQTQSETGDVSPMMM 180
           +YM+NIHYMYDVPIVPAP+QRR     +P++LEEV+QH EEVPPM QT+SE   VSP+MM
Sbjct: 597 QYMENIHYMYDVPIVPAPVQRRRPLVQEPDQLEEVDQHGEEVPPMTQTKSEHNYVSPVMM 656

Query: 181 MPTFGTGYYDSGVGQSLDFGTEYYKSEAGSSSSNFGQEYYDLGTNSPSSYMHGHGRG 202
           MPTFGT YYDSGVGQS DFG  YY SEAG SS++FGQ+YYDLG++  SSYMHGHGRG
Sbjct: 657 MPTFGTTYYDSGVGQSSDFGRGYYNSEAGQSSTDFGQQYYDLGSDPSSSYMHGHGRG 713

[Close]

BLAST of PI0021477 vs. NCBI nr
Match: TYK18891.1 (mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 305.1 bits (780), Expect = 5.2e-79
Identity = 153/239 (64.02%), Postives = 178/239 (74.48%), Query Frame = 0


Query: 1   MNSLPNFCTNGHDIWQTINPLICFHIGEWYHPDRTLRQFGTKQDVPVDCNTEPLLHNIEL 60
           ++SLP+FCTNGHDIW+TI+PLICF+IGEW+HPDR LRQFG +Q VP DCNTEP LHNI+L
Sbjct: 19  IDSLPHFCTNGHDIWRTISPLICFYIGEWHHPDRVLRQFGIQQAVPRDCNTEPPLHNIDL 78

Query: 61  RMTDW-------------------------------LNNSRLRDVVDDPQQVLDICNNNE 120
           R  DW                                NN RLR+V DDPQQVL+ICN+NE
Sbjct: 79  RTADWSDKVAHLVMRWHNRRRFTATGPPIEQFDMDRSNNIRLRNVADDPQQVLNICNDNE 138

Query: 121 RYMQNIHYMYDVPIVPAPIQRR-----QPNELEEVEQHVEEVPPM--RQTQSETGDVSPM 180
           +YM+NIHYMYDVPIVPAP+QRR     +P++LEEV+QH EEVPPM   QTQSE   VSP+
Sbjct: 139 QYMENIHYMYDVPIVPAPVQRRRPLVQEPDQLEEVDQHGEEVPPMTQTQTQSEHNYVSPV 198

Query: 181 MMMPTFGTGYYDSGVGQSLDFGTEYYKSEAGSSSSNFGQEYYDLGTNSPSSYMHGHGRG 202
           MMMPTFGT YYDSGVGQS DFG  YY SEAG SS++FGQ+YYDLG++  SSYMHGHGRG
Sbjct: 199 MMMPTFGTTYYDSGVGQSSDFGRGYYNSEAGQSSTDFGQQYYDLGSDPSSSYMHGHGRG 257

[Close]

BLAST of PI0021477 vs. NCBI nr
Match: KAA0051233.1 (mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 303.9 bits (777), Expect = 1.2e-78
Identity = 153/239 (64.02%), Postives = 177/239 (74.06%), Query Frame = 0


Query: 1   MNSLPNFCTNGHDIWQTINPLICFHIGEWYHPDRTLRQFGTKQDVPVDCNTEPLLHNIEL 60
           ++SLP+FCTNGHDIWQTI+PLICF+IGEW+HPDR LRQFG +Q VP DCNTEP LHNI+L
Sbjct: 19  IDSLPHFCTNGHDIWQTISPLICFYIGEWHHPDRVLRQFGIQQAVPRDCNTEPPLHNIDL 78

Query: 61  RMTDW-------------------------------LNNSRLRDVVDDPQQVLDICNNNE 120
           R  DW                                NN RLR+V DDPQQVL+ICN+NE
Sbjct: 79  RTADWSDKVAHLVMRWHNRRRFTATGPPIEQFDMDRSNNIRLRNVADDPQQVLNICNDNE 138

Query: 121 RYMQNIHYMYDVPIVPAPIQRR-----QPNELEEVEQHVEEVPPM--RQTQSETGDVSPM 180
           +YM+NIHYMYDVPIVPAP+QRR     +P++LEEV+QH EEVPPM   QTQSE   VSP+
Sbjct: 139 QYMENIHYMYDVPIVPAPVQRRRPLVQEPDQLEEVDQHGEEVPPMTQTQTQSEHNYVSPV 198

Query: 181 MMMPTFGTGYYDSGVGQSLDFGTEYYKSEAGSSSSNFGQEYYDLGTNSPSSYMHGHGRG 202
           MMMPTFGT YYDSGVGQS DFG  YY SEAG SS++FGQ+YYDLG++  SSYMH HGRG
Sbjct: 199 MMMPTFGTTYYDSGVGQSSDFGRGYYNSEAGQSSTDFGQQYYDLGSDPSSSYMHDHGRG 257

[Close]

BLAST of PI0021477 vs. NCBI nr
Match: KAA0036767.1 (serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 297.4 bits (760), Expect = 1.1e-76
Identity = 151/264 (57.20%), Postives = 179/264 (67.80%), Query Frame = 0


Query: 1   MNSLPNFCTNGHDIWQTINPLICFHIGEWYHPDRTLRQFGTKQDVPVDCNTEPLLHNIEL 60
           ++SLP+FCTNGH+IW+TI+PLICF+IGEW+HPDR LRQFG +Q VP DCNTEPLLHNI+L
Sbjct: 180 IDSLPHFCTNGHNIWRTISPLICFYIGEWHHPDRVLRQFGIQQAVPRDCNTEPLLHNIDL 239

Query: 61  RMTDW------------------------------------------------------- 120
           R  DW                                                       
Sbjct: 240 RTADWSDRVAHLVMRWHNRRRFTATGPPIEQFDMDVTQEYIHWYKNISKLYITQPGAAMS 299

Query: 121 ---LNNSRLRDVVDDPQQVLDICNNNERYMQNIHYMYDVPIVPAPIQRR-----QPNELE 180
               NN RLR+V DDPQQVL+ICN+NE+YM+NIHYMYDVPIVPAP+QRR     +P++LE
Sbjct: 300 HLRSNNIRLRNVADDPQQVLNICNDNEQYMENIHYMYDVPIVPAPVQRRRPLVQEPDQLE 359

Query: 181 EVEQHVEEVPPMRQTQSETGDVSPMMMMPTFGTGYYDSGVGQSLDFGTEYYKSEAGSSSS 202
           EV+QH +EVPPM QTQSE   VSP+MMMPTFGT YYDSGVGQS DFG  YY S+AG SS+
Sbjct: 360 EVDQHGKEVPPMTQTQSEHNYVSPVMMMPTFGTTYYDSGVGQSSDFGRGYYNSKAGQSST 419

[Close]

BLAST of PI0021477 vs. NCBI nr
Match: KAA0067080.1 (mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 297.4 bits (760), Expect = 1.1e-76
Identity = 152/264 (57.58%), Postives = 178/264 (67.42%), Query Frame = 0


Query: 1   MNSLPNFCTNGHDIWQTINPLICFHIGEWYHPDRTLRQFGTKQDVPVDCNTEPLLHNIEL 60
           ++SLP+FCTNGH+IW+TI+PLICF+IGEW+HPDR LRQFG +Q VP DCNTEPLLHNI+L
Sbjct: 293 IDSLPHFCTNGHNIWRTISPLICFYIGEWHHPDRVLRQFGIQQAVPRDCNTEPLLHNIDL 352

Query: 61  RMTDW------------------------------------------------------- 120
           R  DW                                                       
Sbjct: 353 RTADWSDRVAHLVMRWHNRRRFTATGPPIEQFDMDVTQEYINWYKNISKLYITQPGAVMS 412

Query: 121 ---LNNSRLRDVVDDPQQVLDICNNNERYMQNIHYMYDVPIVPAPIQRR-----QPNELE 180
               NN RLR+V DDPQQVL+ICN+NE+YM+NIHYMYDVPIVPAP+QRR     +P++LE
Sbjct: 413 HLRSNNIRLRNVADDPQQVLNICNDNEQYMENIHYMYDVPIVPAPVQRRRPLVQEPDQLE 472

Query: 181 EVEQHVEEVPPMRQTQSETGDVSPMMMMPTFGTGYYDSGVGQSLDFGTEYYKSEAGSSSS 202
           EV+QH EEVPPM QTQSE   VSP+MMMPTFGT YYDS VGQS DFG  YY SEAG SS+
Sbjct: 473 EVDQHGEEVPPMTQTQSEHNYVSPVMMMPTFGTTYYDSEVGQSSDFGRGYYNSEAGQSST 532

[Close]

BLAST of PI0021477 vs. TAIR 10
Match: AT1G48120.1 (hydrolases;protein serine/threonine phosphatases )

HSP 1 Score: 75.1 bits (183), Expect = 8.2e-14
Identity = 42/124 (33.87%), Postives = 64/124 (51.61%), Query Frame = 0


Query: 4   LPNFCTNGHDIWQTINPLICFHIGEWYHPDRTLRQFGTKQDVPVDCNTEPLLHNIELR-- 63
           +P  C +G +IW+T+ PLICF + EW+ PDR LRQFG  Q +P  C+ E  LH I+ R  
Sbjct: 332 IPLICVSGENIWRTVAPLICFDVVEWHRPDRVLRQFGLHQTIPAPCDNEKALHAIDKRGK 391

Query: 64  -MTDW---------LNNSRLRDVVDDPQQVLDICNNNERYMQNIHYMYDVPIVPAPIQRR 116
              DW         L  +R+  VV    +   + + N+ YM+   Y      + +P+  R
Sbjct: 392 SEYDWSARHSRHIGLWEARVSSVVSGEPECSPM-DYNDPYME--WYRRITRRIISPMNER 451

The following BLAST results are available for this feature:

BLAST of PI0021477 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LNG5	1.1e-12	33.87	Serine/threonine-protein phosphatase 7 long form homolog OS=Arabidopsis thaliana...	[more]

BLAST of PI0021477 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UKC7	3.0e-80	64.14	Serine/threonine-protein phosphatase 7 long form-like protein OS=Cucumis melo va...	[more]
A0A5D3D5R5	2.5e-79	64.02	Mediator of RNA polymerase II transcription subunit 12-like isoform X1 OS=Cucumi...	[more]
A0A5A7U5S8	5.6e-79	64.02	Mediator of RNA polymerase II transcription subunit 12-like isoform X1 OS=Cucumi...	[more]
A0A5A7VIP6	5.3e-77	57.58	Mediator of RNA polymerase II transcription subunit 12-like isoform X1 OS=Cucumi...	[more]
A0A5D3BAB0	5.3e-77	57.20	Serine/threonine-protein phosphatase 7 long form-like protein OS=Cucumis melo va...	[more]

BLAST of PI0021477 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0055624.1	6.1e-80	64.14	serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var....	[more]
TYK18891.1	5.2e-79	64.02	mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis ...	[more]
KAA0051233.1	1.2e-78	64.02	mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis ...	[more]
KAA0036767.1	1.1e-76	57.20	serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var....	[more]
KAA0067080.1	1.1e-76	57.58	mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis ...	[more]

BLAST of PI0021477 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G48120.1	8.2e-14	33.87	hydrolases;protein serine/threonine phosphatases	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR019557	Aminotransferase-like, plant mobile domain	PFAM	PF10536	PMD	coord: 10..92 e-value: 5.1E-11 score: 42.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 121..141

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0021477.1	PI0021477.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0048507	meristem development