Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCTTAACTGTATTTTTAGCCAATGTATGAGTATTTTAATAATTCTTAATTTTGTTGAAAAAGATTCTGTGAATTTATTCCGCTGCGTAAGGGTTTCAATCCCTTCAGTGGTATCTTCTGTTGTACACACGAACGTCAATGGCACTATTAAGTTCTTGTACAACTATGCCAAGAAGTATATGAAGAAAGAAGACTTGATTCTCATCAATTTAAATGAGCATATATTTGGAAAGGAGAAATTAGTTTATTTGCATCGTGATGACATACTTCAAAATTGTGGAATGGTTGAAATTGGTTACATGTGTATACTCACATACATCGCGTAAGTATATAACGTCTATTACTTCACTTTTATAGTTCACATTTCAATACTAATTTTTGTTTTATGTAGGTATCTTTGGGATGAATTGAATAATGAGATAACAATTTTTTTTTATGTCATTGACCAAACCAAAATATCGTCAATCGTAAAGTCTTCAGATCTTCGGTGTAGAAATTTAGCCAACCAACTAGAAATGACTAGTTTGGACCAGTTAGTACTCATTCCATATAACAAGAGGTAAGTAAATGACAATTTATATTACTCTACTACTTTTTAATTCGTACTCAATGCATGTTAAAAATATTGTTTATTCTAGTTATCATTGGCTATTGATTGTCATCAATCTTAAAAAAATTGTGTTTATGTGTTGGACTCTCTTTGAAGTAAGGTGGATGAAGACTTCCATGGTGCTATAAATGTGTAAGTGCATTAGACTTTCTTAATTGTTAATTCAATGTTTATGAAGTACTAACTTTCAAAATTTATAGTGGATTGAAAATTTGGCAATCTAAACATGATCTCCACCACTATCAATCAAATCCACAATGAAAACTTATGAAGGTAAAATTGCATTCCATACATGAGTAAGGTGTCAATTGGATTTTGTAGGGTGCGGGTATTATGTCGAAAAGTACATATGTGAAATAGTGCATAATCGTAGCACTCTTATGAGTATGCTTGTAAGTAAATTATTTAGTTACTTGCCTTACGATTTAATATAAGGTATTTAAACTTATGTTGTGTTTGTTTATCTTCTTCTTTGTAGTTCAATACGAAAAATGCATATAAGCAAGAAGAAATTGATGAGGTTCGAACAAAATGGACAAGTTTTGTTGGACGATTTGTGTAA
mRNA sequence
ATGCTTAACTGTATTTTTAGCCAATGTATGAGTATTTTAATAATTCTTAATTTTGTTGAAAAAGATTCTGTGAATTTATTCCGCTGCGTAAGGGTTTCAATCCCTTCAGTGGTATCTTCTGTTGTACACACGAACGTCAATGGCACTATTAAGTTCTTGTACAACTATGCCAAGAAGTATATGAAGAAAGAAGACTTGATTCTCATCAATTTAAATGAGCATATATTTGGAAAGGAGAAATTAGTTTATTTGCATCGTGATGACATACTTCAAAATTGTGGAATGGTTGAAATTGGTTACATGTGTATACTCACATACATCGCGTATCTTTGGGATGAATTGAATAATGAGATAACAATTTTTTTTTATGTCATTGACCAAACCAAAATATCGTCAATCGTAAAGTCTTCAGATCTTCGGTGTAGAAATTTAGCCAACCAACTAGAAATGACTAGTTTGGACCAGTTAGTACTCATTCCATATAACAAGAGTAAGGTGGATGAAGACTTCCATGGGTGCGGGTATTATGTCGAAAAGTACATATGTGAAATAGTGCATAATCGTAGCACTCTTATGAGTATGCTTTTCAATACGAAAAATGCATATAAGCAAGAAGAAATTGATGAGGTTCGAACAAAATGGACAAGTTTTGTTGGACGATTTGTGTAA
Coding sequence (CDS)
ATGCTTAACTGTATTTTTAGCCAATGTATGAGTATTTTAATAATTCTTAATTTTGTTGAAAAAGATTCTGTGAATTTATTCCGCTGCGTAAGGGTTTCAATCCCTTCAGTGGTATCTTCTGTTGTACACACGAACGTCAATGGCACTATTAAGTTCTTGTACAACTATGCCAAGAAGTATATGAAGAAAGAAGACTTGATTCTCATCAATTTAAATGAGCATATATTTGGAAAGGAGAAATTAGTTTATTTGCATCGTGATGACATACTTCAAAATTGTGGAATGGTTGAAATTGGTTACATGTGTATACTCACATACATCGCGTATCTTTGGGATGAATTGAATAATGAGATAACAATTTTTTTTTATGTCATTGACCAAACCAAAATATCGTCAATCGTAAAGTCTTCAGATCTTCGGTGTAGAAATTTAGCCAACCAACTAGAAATGACTAGTTTGGACCAGTTAGTACTCATTCCATATAACAAGAGTAAGGTGGATGAAGACTTCCATGGGTGCGGGTATTATGTCGAAAAGTACATATGTGAAATAGTGCATAATCGTAGCACTCTTATGAGTATGCTTTTCAATACGAAAAATGCATATAAGCAAGAAGAAATTGATGAGGTTCGAACAAAATGGACAAGTTTTGTTGGACGATTTGTGTAA
Protein sequence
MLNCIFSQCMSILIILNFVEKDSVNLFRCVRVSIPSVVSSVVHTNVNGTIKFLYNYAKKYMKKEDLILINLNEHIFGKEKLVYLHRDDILQNCGMVEIGYMCILTYIAYLWDELNNEITIFFYVIDQTKISSIVKSSDLRCRNLANQLEMTSLDQLVLIPYNKSKVDEDFHGCGYYVEKYICEIVHNRSTLMSMLFNTKNAYKQEEIDEVRTKWTSFVGRFV
Homology
BLAST of PI0021448 vs. ExPASy TrEMBL
Match:
A0A5A7U441 (Transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold673G001120 PE=3 SV=1)
HSP 1 Score: 209.5 bits (532), Expect = 1.4e-50
Identity = 122/246 (49.59%), Postives = 144/246 (58.54%), Query Frame = 0
Query: 37 VVSSVVHTNVNGTIKFLYNYAKKYMKKEDLILINLNEHIFGKEKLVYLHRDDILQNCGMV 96
VV S +T+VNGTIK L +A MK D+I I +NE IFG +K VYL R+D+L CGMV
Sbjct: 566 VVYSSNYTDVNGTIKLLNRHAVNNMKDVDMIRIPMNELIFGSDKFVYLAREDLLHYCGMV 625
Query: 97 EIGYMCILTYIAYLWDELNNEITIFFYVIDQTKISSIVKSSDLRCRNLANQLEMTSLDQL 156
EIGYMCIL YI YLWDE + F+VIDQ+KISS +K DLR RNLANQLE +L+Q
Sbjct: 626 EIGYMCILAYITYLWDEC--DCARNFFVIDQSKISSHIKDRDLRSRNLANQLEAVNLEQK 685
Query: 157 VLIPYN-----------------------KSKVDEDFH---------------------- 216
VLIPYN +SKV+ED H
Sbjct: 686 VLIPYNTGFHWMLHVIDLRENCVYVLDSLRSKVNEDIHGVINVGLKTWQAKHDLQRYRST 745
Query: 217 ---------------GCGYYVEKYICEIVHNRSTLMSMLFNTKNAYKQEEIDEVRTKWTS 223
GCGYYV+KYI EIVHN ST ++ LFNTKNAY+QEEIDE+RTKW +
Sbjct: 746 PKWRPVKCPRQLDSVGCGYYVQKYIHEIVHNSSTSITSLFNTKNAYRQEEIDEIRTKWAA 805
BLAST of PI0021448 vs. ExPASy TrEMBL
Match:
A0A5A7VKR6 (ULP_PROTEASE domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold2484G00030 PE=3 SV=1)
HSP 1 Score: 201.4 bits (511), Expect = 3.8e-48
Identity = 114/226 (50.44%), Postives = 138/226 (61.06%), Query Frame = 0
Query: 43 HTNVNGTIKFLYNYAKKYMKKEDLILINLNEHIFGKEKLVYLHRDDILQNCGMVEIGYMC 102
+T+VNG IK L +A MK D+I I +NE IFG +K VYL R+D+L C MVEIGYMC
Sbjct: 404 YTDVNGIIKLLNRHAVNNMKDVDMIRIPMNELIFGSDKFVYLAREDLLHYCDMVEIGYMC 463
Query: 103 ILTYIAYLWDELNNEITIFFYVIDQTKISSIVKSSDLRCRNLANQLEMTSLDQLVLIPYN 162
IL YI LWD+ + F+VIDQ+KISS +K DLR RNLANQLE +L+Q VLIPYN
Sbjct: 464 ILAYITCLWDKC--DCARNFFVIDQSKISSHIKDRDLRPRNLANQLEAVNLEQKVLIPYN 523
Query: 163 -----------------------KSKVDEDFH-----------------------GCGYY 222
+SKV+ED H GCGYY
Sbjct: 524 TGFHWMLHFIDLRENCVYVLDSLRSKVNEDIHGIIIVLIYIQFIYMQCPRQLDYVGCGYY 583
BLAST of PI0021448 vs. ExPASy TrEMBL
Match:
A0A5D3CUJ0 (ULP_PROTEASE domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold105G00250 PE=3 SV=1)
HSP 1 Score: 199.5 bits (506), Expect = 1.5e-47
Identity = 115/240 (47.92%), Postives = 139/240 (57.92%), Query Frame = 0
Query: 43 HTNVNGTIKFLYNYAKKYMKKEDLILINLNEHIFGKEKLVYLHRDDILQNCGMVEIGYMC 102
+T+VNG IK L +A MK D+I I +NE IFG +K VYL R+D+L CGMVEIGYMC
Sbjct: 120 YTDVNGIIKLLNRHAMNNMKDVDMIRIPMNELIFGSDKFVYLAREDLLHYCGMVEIGYMC 179
Query: 103 ILTYIAYLWDELNNEITIFFYVIDQTKISSIVKSSDLRCRNLANQLEMTSLDQLVLIPYN 162
IL YI LWD+ + F+VIDQ+KISS +K DLR RNLANQLE +L+Q VLIPYN
Sbjct: 180 ILAYITCLWDKC--DCAKNFFVIDQSKISSHIKDRDLRSRNLANQLEAVNLEQKVLIPYN 239
Query: 163 -----------------------KSKVDEDFH---------------------------- 222
+SKV+ED H
Sbjct: 240 TGFHWMLHVIDLRENCVYVLDSLRSKVNEDIHGIINVGLKTWQAKHDLQRYRSTPKWRPV 299
BLAST of PI0021448 vs. ExPASy TrEMBL
Match:
A0A5D3DGR4 (ULP_PROTEASE domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold195G001010 PE=3 SV=1)
HSP 1 Score: 199.5 bits (506), Expect = 1.5e-47
Identity = 115/240 (47.92%), Postives = 139/240 (57.92%), Query Frame = 0
Query: 43 HTNVNGTIKFLYNYAKKYMKKEDLILINLNEHIFGKEKLVYLHRDDILQNCGMVEIGYMC 102
+T+VNG IK L +A MK D+I I +NE IFG +K VYL R+D+L CGMVEIGYMC
Sbjct: 120 YTDVNGIIKLLNRHAMNNMKDVDMIRIPMNELIFGSDKFVYLAREDLLHYCGMVEIGYMC 179
Query: 103 ILTYIAYLWDELNNEITIFFYVIDQTKISSIVKSSDLRCRNLANQLEMTSLDQLVLIPYN 162
IL YI LWD+ + F+VIDQ+KISS +K DLR RNLANQLE +L+Q VLIPYN
Sbjct: 180 ILAYITCLWDKC--DCAKNFFVIDQSKISSHIKDRDLRSRNLANQLEAVNLEQKVLIPYN 239
Query: 163 -----------------------KSKVDEDFH---------------------------- 222
+SKV+ED H
Sbjct: 240 TGFHWMLHVIDLRENCVYVLDSLRSKVNEDIHGIINVGLKTWQAKHDLQRYRSTPKWRPV 299
BLAST of PI0021448 vs. ExPASy TrEMBL
Match:
A0A5D3CSK7 (ULP_PROTEASE domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1081G00120 PE=3 SV=1)
HSP 1 Score: 199.5 bits (506), Expect = 1.5e-47
Identity = 115/240 (47.92%), Postives = 139/240 (57.92%), Query Frame = 0
Query: 43 HTNVNGTIKFLYNYAKKYMKKEDLILINLNEHIFGKEKLVYLHRDDILQNCGMVEIGYMC 102
+T+VNG IK L +A MK D+I I +NE IFG +K VYL R+D+L CGMVEIGYMC
Sbjct: 120 YTDVNGIIKLLNRHAMNNMKDVDMIRIPMNELIFGSDKFVYLAREDLLHYCGMVEIGYMC 179
Query: 103 ILTYIAYLWDELNNEITIFFYVIDQTKISSIVKSSDLRCRNLANQLEMTSLDQLVLIPYN 162
IL YI LWD+ + F+VIDQ+KISS +K DLR RNLANQLE +L+Q VLIPYN
Sbjct: 180 ILAYITCLWDKC--DCAKNFFVIDQSKISSHIKDRDLRSRNLANQLEAVNLEQKVLIPYN 239
Query: 163 -----------------------KSKVDEDFH---------------------------- 222
+SKV+ED H
Sbjct: 240 TGFHWMLHVIDLRENCVYVLDSLRSKVNEDIHGIINVGLKTWQAKHDLQRYRSTPKWRPV 299
BLAST of PI0021448 vs. NCBI nr
Match:
KAA0050643.1 (transposase [Cucumis melo var. makuwa])
HSP 1 Score: 209.5 bits (532), Expect = 2.9e-50
Identity = 122/246 (49.59%), Postives = 144/246 (58.54%), Query Frame = 0
Query: 37 VVSSVVHTNVNGTIKFLYNYAKKYMKKEDLILINLNEHIFGKEKLVYLHRDDILQNCGMV 96
VV S +T+VNGTIK L +A MK D+I I +NE IFG +K VYL R+D+L CGMV
Sbjct: 566 VVYSSNYTDVNGTIKLLNRHAVNNMKDVDMIRIPMNELIFGSDKFVYLAREDLLHYCGMV 625
Query: 97 EIGYMCILTYIAYLWDELNNEITIFFYVIDQTKISSIVKSSDLRCRNLANQLEMTSLDQL 156
EIGYMCIL YI YLWDE + F+VIDQ+KISS +K DLR RNLANQLE +L+Q
Sbjct: 626 EIGYMCILAYITYLWDEC--DCARNFFVIDQSKISSHIKDRDLRSRNLANQLEAVNLEQK 685
Query: 157 VLIPYN-----------------------KSKVDEDFH---------------------- 216
VLIPYN +SKV+ED H
Sbjct: 686 VLIPYNTGFHWMLHVIDLRENCVYVLDSLRSKVNEDIHGVINVGLKTWQAKHDLQRYRST 745
Query: 217 ---------------GCGYYVEKYICEIVHNRSTLMSMLFNTKNAYKQEEIDEVRTKWTS 223
GCGYYV+KYI EIVHN ST ++ LFNTKNAY+QEEIDE+RTKW +
Sbjct: 746 PKWRPVKCPRQLDSVGCGYYVQKYIHEIVHNSSTSITSLFNTKNAYRQEEIDEIRTKWAA 805
BLAST of PI0021448 vs. NCBI nr
Match:
KAA0067800.1 (uncharacterized protein E6C27_scaffold2484G00030 [Cucumis melo var. makuwa])
HSP 1 Score: 201.4 bits (511), Expect = 7.9e-48
Identity = 114/226 (50.44%), Postives = 138/226 (61.06%), Query Frame = 0
Query: 43 HTNVNGTIKFLYNYAKKYMKKEDLILINLNEHIFGKEKLVYLHRDDILQNCGMVEIGYMC 102
+T+VNG IK L +A MK D+I I +NE IFG +K VYL R+D+L C MVEIGYMC
Sbjct: 404 YTDVNGIIKLLNRHAVNNMKDVDMIRIPMNELIFGSDKFVYLAREDLLHYCDMVEIGYMC 463
Query: 103 ILTYIAYLWDELNNEITIFFYVIDQTKISSIVKSSDLRCRNLANQLEMTSLDQLVLIPYN 162
IL YI LWD+ + F+VIDQ+KISS +K DLR RNLANQLE +L+Q VLIPYN
Sbjct: 464 ILAYITCLWDKC--DCARNFFVIDQSKISSHIKDRDLRPRNLANQLEAVNLEQKVLIPYN 523
Query: 163 -----------------------KSKVDEDFH-----------------------GCGYY 222
+SKV+ED H GCGYY
Sbjct: 524 TGFHWMLHFIDLRENCVYVLDSLRSKVNEDIHGIIIVLIYIQFIYMQCPRQLDYVGCGYY 583
BLAST of PI0021448 vs. NCBI nr
Match:
TYK07626.1 (uncharacterized protein E5676_scaffold105G00250 [Cucumis melo var. makuwa] >TYK15132.1 uncharacterized protein E5676_scaffold259G00690 [Cucumis melo var. makuwa])
HSP 1 Score: 199.5 bits (506), Expect = 3.0e-47
Identity = 115/240 (47.92%), Postives = 139/240 (57.92%), Query Frame = 0
Query: 43 HTNVNGTIKFLYNYAKKYMKKEDLILINLNEHIFGKEKLVYLHRDDILQNCGMVEIGYMC 102
+T+VNG IK L +A MK D+I I +NE IFG +K VYL R+D+L CGMVEIGYMC
Sbjct: 120 YTDVNGIIKLLNRHAMNNMKDVDMIRIPMNELIFGSDKFVYLAREDLLHYCGMVEIGYMC 179
Query: 103 ILTYIAYLWDELNNEITIFFYVIDQTKISSIVKSSDLRCRNLANQLEMTSLDQLVLIPYN 162
IL YI LWD+ + F+VIDQ+KISS +K DLR RNLANQLE +L+Q VLIPYN
Sbjct: 180 ILAYITCLWDKC--DCAKNFFVIDQSKISSHIKDRDLRSRNLANQLEAVNLEQKVLIPYN 239
Query: 163 -----------------------KSKVDEDFH---------------------------- 222
+SKV+ED H
Sbjct: 240 TGFHWMLHVIDLRENCVYVLDSLRSKVNEDIHGIINVGLKTWQAKHDLQRYRSTPKWRPV 299
BLAST of PI0021448 vs. NCBI nr
Match:
TYK22658.1 (uncharacterized protein E5676_scaffold195G001010 [Cucumis melo var. makuwa])
HSP 1 Score: 199.5 bits (506), Expect = 3.0e-47
Identity = 115/240 (47.92%), Postives = 139/240 (57.92%), Query Frame = 0
Query: 43 HTNVNGTIKFLYNYAKKYMKKEDLILINLNEHIFGKEKLVYLHRDDILQNCGMVEIGYMC 102
+T+VNG IK L +A MK D+I I +NE IFG +K VYL R+D+L CGMVEIGYMC
Sbjct: 120 YTDVNGIIKLLNRHAMNNMKDVDMIRIPMNELIFGSDKFVYLAREDLLHYCGMVEIGYMC 179
Query: 103 ILTYIAYLWDELNNEITIFFYVIDQTKISSIVKSSDLRCRNLANQLEMTSLDQLVLIPYN 162
IL YI LWD+ + F+VIDQ+KISS +K DLR RNLANQLE +L+Q VLIPYN
Sbjct: 180 ILAYITCLWDKC--DCAKNFFVIDQSKISSHIKDRDLRSRNLANQLEAVNLEQKVLIPYN 239
Query: 163 -----------------------KSKVDEDFH---------------------------- 222
+SKV+ED H
Sbjct: 240 TGFHWMLHVIDLRENCVYVLDSLRSKVNEDIHGIINVGLKTWQAKHDLQRYRSTPKWRPV 299
BLAST of PI0021448 vs. NCBI nr
Match:
TYK14811.1 (uncharacterized protein E5676_scaffold1081G00120 [Cucumis melo var. makuwa])
HSP 1 Score: 199.5 bits (506), Expect = 3.0e-47
Identity = 115/240 (47.92%), Postives = 139/240 (57.92%), Query Frame = 0
Query: 43 HTNVNGTIKFLYNYAKKYMKKEDLILINLNEHIFGKEKLVYLHRDDILQNCGMVEIGYMC 102
+T+VNG IK L +A MK D+I I +NE IFG +K VYL R+D+L CGMVEIGYMC
Sbjct: 120 YTDVNGIIKLLNRHAMNNMKDVDMIRIPMNELIFGSDKFVYLAREDLLHYCGMVEIGYMC 179
Query: 103 ILTYIAYLWDELNNEITIFFYVIDQTKISSIVKSSDLRCRNLANQLEMTSLDQLVLIPYN 162
IL YI LWD+ + F+VIDQ+KISS +K DLR RNLANQLE +L+Q VLIPYN
Sbjct: 180 ILAYITCLWDKC--DCAKNFFVIDQSKISSHIKDRDLRSRNLANQLEAVNLEQKVLIPYN 239
Query: 163 -----------------------KSKVDEDFH---------------------------- 222
+SKV+ED H
Sbjct: 240 TGFHWMLHVIDLRENCVYVLDSLRSKVNEDIHGIINVGLKTWQAKHDLQRYRSTPKWRPV 299
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A5A7U441 | 1.4e-50 | 49.59 | Transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold673G001120 P... | [more] |
A0A5A7VKR6 | 3.8e-48 | 50.44 | ULP_PROTEASE domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN... | [more] |
A0A5D3CUJ0 | 1.5e-47 | 47.92 | ULP_PROTEASE domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN... | [more] |
A0A5D3DGR4 | 1.5e-47 | 47.92 | ULP_PROTEASE domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN... | [more] |
A0A5D3CSK7 | 1.5e-47 | 47.92 | ULP_PROTEASE domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN... | [more] |
Match Name | E-value | Identity | Description | |
KAA0050643.1 | 2.9e-50 | 49.59 | transposase [Cucumis melo var. makuwa] | [more] |
KAA0067800.1 | 7.9e-48 | 50.44 | uncharacterized protein E6C27_scaffold2484G00030 [Cucumis melo var. makuwa] | [more] |
TYK07626.1 | 3.0e-47 | 47.92 | uncharacterized protein E5676_scaffold105G00250 [Cucumis melo var. makuwa] >TYK1... | [more] |
TYK22658.1 | 3.0e-47 | 47.92 | uncharacterized protein E5676_scaffold195G001010 [Cucumis melo var. makuwa] | [more] |
TYK14811.1 | 3.0e-47 | 47.92 | uncharacterized protein E5676_scaffold1081G00120 [Cucumis melo var. makuwa] | [more] |
Match Name | E-value | Identity | Description | |