PI0021413 (gene) Melon (PI 482460) v1

Overview


Name	PI0021413
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	Unknown protein
Location	chr03: 24260518 .. 24260772 (+)
RNA-Seq Expression	PI0021413
Synteny	PI0021413

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGAAGGAAGAAGAGGAATAGGAAAGCCAAATCACGATTCATCGCCGGAAAAGATCTGCCGTCGTTCTACGACTGGCGAATCGAACAGAAACGCGATGAAATCGAGATGGCGGAAACAGGGCAGAAAGGTGAAGGATTTGAATTCAAAGAGGAAGATAGATGGAAGAAGTTGTCAATTGAAAAGTCAAAGTCAACGAAAGAGAGAAAGAGAGAAACGCAGGCGGGGCCACCGGAACAAGGTCTGCAGTTATAA

mRNA sequence

ATGAGAAGGAAGAAGAGGAATAGGAAAGCCAAATCACGATTCATCGCCGGAAAAGATCTGCCGTCGTTCTACGACTGGCGAATCGAACAGAAACGCGATGAAATCGAGATGGCGGAAACAGGGCAGAAAGGTGAAGGATTTGAATTCAAAGAGGAAGATAGATGGAAGAAGTTGTCAATTGAAAAGTCAAAGTCAACGAAAGAGAGAAAGAGAGAAACGCAGGCGGGGCCACCGGAACAAGGTCTGCAGTTATAA

Coding sequence (CDS)

ATGAGAAGGAAGAAGAGGAATAGGAAAGCCAAATCACGATTCATCGCCGGAAAAGATCTGCCGTCGTTCTACGACTGGCGAATCGAACAGAAACGCGATGAAATCGAGATGGCGGAAACAGGGCAGAAAGGTGAAGGATTTGAATTCAAAGAGGAAGATAGATGGAAGAAGTTGTCAATTGAAAAGTCAAAGTCAACGAAAGAGAGAAAGAGAGAAACGCAGGCGGGGCCACCGGAACAAGGTCTGCAGTTATAA

Protein sequence

MRRKKRNRKAKSRFIAGKDLPSFYDWRIEQKRDEIEMAETGQKGEGFEFKEEDRWKKLSIEKSKSTKERKRETQAGPPEQGLQL

Homology

[Close]

BLAST of PI0021413 vs. ExPASy TrEMBL
Match: A0A5A7U9Z3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold409G001910 PE=4 SV=1)

HSP 1 Score: 105.1 bits (261), Expect = 1.4e-19
Identity = 59/71 (83.10%), Postives = 64/71 (90.14%), Query Frame = 0


Query: 15 IAGKDLPSFYDWRIEQKRDEIEMAETGQKGEGFEFKEEDRW-KKLSIEKSKSTKERKRET 74
          +AGK+LPSFYD RIEQKR+EIEMAETGQ G+GFEFKEED W KKLSIEKSKST+ERK  T
Sbjct: 1  MAGKNLPSFYDRRIEQKRNEIEMAETGQIGKGFEFKEEDGWEKKLSIEKSKSTRERK--T 60

Query: 75 QAGPPEQGLQL 85
          QAGPPEQ LQL
Sbjct: 61 QAGPPEQDLQL 69

[Close]

BLAST of PI0021413 vs. ExPASy TrEMBL
Match: A0A0A0KBS8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G014575 PE=4 SV=1)

HSP 1 Score: 64.7 bits (156), Expect = 2.1e-07
Identity = 36/46 (78.26%), Postives = 41/46 (89.13%), Query Frame = 0


Query: 28 IEQKRDEIEMAETGQKGEGFEFKEEDRW-KKLSIEKSKSTKERKRE 73
          +EQKR+EIE AETGQ GEG EFKEEDRW KKLS+EKSKST+E +RE
Sbjct: 1  MEQKREEIEKAETGQIGEGLEFKEEDRWKKKLSMEKSKSTREGERE 46

[Close]

BLAST of PI0021413 vs. NCBI nr
Match: KAA0052000.1 (hypothetical protein E6C27_scaffold60G004850 [Cucumis melo var. makuwa] >TYK04559.1 hypothetical protein E5676_scaffold409G001910 [Cucumis melo var. makuwa])

HSP 1 Score: 105.1 bits (261), Expect = 2.9e-19
Identity = 59/71 (83.10%), Postives = 64/71 (90.14%), Query Frame = 0


Query: 15 IAGKDLPSFYDWRIEQKRDEIEMAETGQKGEGFEFKEEDRW-KKLSIEKSKSTKERKRET 74
          +AGK+LPSFYD RIEQKR+EIEMAETGQ G+GFEFKEED W KKLSIEKSKST+ERK  T
Sbjct: 1  MAGKNLPSFYDRRIEQKRNEIEMAETGQIGKGFEFKEEDGWEKKLSIEKSKSTRERK--T 60

Query: 75 QAGPPEQGLQL 85
          QAGPPEQ LQL
Sbjct: 61 QAGPPEQDLQL 69

[Close]

BLAST of PI0021413 vs. NCBI nr
Match: KGN45837.1 (hypothetical protein Csa_004958 [Cucumis sativus])

HSP 1 Score: 64.7 bits (156), Expect = 4.4e-07
Identity = 36/46 (78.26%), Postives = 41/46 (89.13%), Query Frame = 0


Query: 28 IEQKRDEIEMAETGQKGEGFEFKEEDRW-KKLSIEKSKSTKERKRE 73
          +EQKR+EIE AETGQ GEG EFKEEDRW KKLS+EKSKST+E +RE
Sbjct: 1  MEQKREEIEKAETGQIGEGLEFKEEDRWKKKLSMEKSKSTREGERE 46

The following BLAST results are available for this feature:

BLAST of PI0021413 vs.


Match Name	E-value	Identity	Description

BLAST of PI0021413 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7U9Z3	1.4e-19	83.10	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A0A0KBS8	2.1e-07	78.26	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G014575 PE=4 SV=1	[more]

BLAST of PI0021413 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0052000.1	2.9e-19	83.10	hypothetical protein E6C27_scaffold60G004850 [Cucumis melo var. makuwa] >TYK0455...	[more]
KGN45837.1	4.4e-07	78.26	hypothetical protein Csa_004958 [Cucumis sativus]	[more]

BLAST of PI0021413 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 60..75
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 60..84

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0021413.1	PI0021413.1	mRNA