PI0021400 (gene) Melon (PI 482460) v1

Overview
NamePI0021400
Typegene
OrganismCucumis metuliferus (Melon (PI 482460) v1)
DescriptionDUF1985 domain-containing protein
Locationchr08: 11280370 .. 11280555 (-)
RNA-Seq ExpressionPI0021400
SyntenyPI0021400
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCAAAAGATAGGGAAGAACGAATGAGAAGAGCATATGATAAACCCTATATAGAGGAGAAGCTAGTGATATCGAGAATATGGATAAATGCAGCAAGAGGGAAAATGGGACGATCAAACAAAGAGAAAGAAAATTCACCTTCATCAAACATGCCATCATTTGACTTGCATCTGAGTCAGGCTTGA

mRNA sequence

ATGGCAAAAGATAGGGAAGAACGAATGAGAAGAGCATATGATAAACCCTATATAGAGGAGAAGCTAGTGATATCGAGAATATGGATAAATGCAGCAAGAGGGAAAATGGGACGATCAAACAAAGAGAAAGAAAATTCACCTTCATCAAACATGCCATCATTTGACTTGCATCTGAGTCAGGCTTGA

Coding sequence (CDS)

ATGGCAAAAGATAGGGAAGAACGAATGAGAAGAGCATATGATAAACCCTATATAGAGGAGAAGCTAGTGATATCGAGAATATGGATAAATGCAGCAAGAGGGAAAATGGGACGATCAAACAAAGAGAAAGAAAATTCACCTTCATCAAACATGCCATCATTTGACTTGCATCTGAGTCAGGCTTGA

Protein sequence

MAKDREERMRRAYDKPYIEEKLVISRIWINAARGKMGRSNKEKENSPSSNMPSFDLHLSQA
Homology
BLAST of PI0021400 vs. ExPASy TrEMBL
Match: A0A5A7SVZ4 (Protein Ycf2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold275G00830 PE=4 SV=1)

HSP 1 Score: 57.0 bits (136), Expect = 3.2e-05
Identity = 28/48 (58.33%), Postives = 36/48 (75.00%), Query Frame = 0

Query: 1   MAKDREERMRRAYDKPYIEEKLVISRIWINAARGKMGRSNKEKENSPS 49
           M +D+E+RM+R+ DK Y E K V + IWI+  RGK+G SNKEKENS S
Sbjct: 131 MVEDKEQRMKRSNDKSYREVKPVSTGIWIDVVRGKVGPSNKEKENSSS 178

BLAST of PI0021400 vs. ExPASy TrEMBL
Match: A0A5A7TL52 (DUF1985 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold824G001090 PE=4 SV=1)

HSP 1 Score: 54.3 bits (129), Expect = 2.1e-04
Identity = 31/53 (58.49%), Postives = 37/53 (69.81%), Query Frame = 0

Query: 9   MRRAYDKPYIEEKLVISRIWINAARGKMGRSNKEKENSPSSNMPSFDLHLSQA 62
           M+R+  K Y E   V +RIWI+A RGK+    K+KENS SS  PSFDLHLSQA
Sbjct: 284 MKRSNAKEYREVTPVSTRIWIDALRGKVVELRKDKENS-SSEWPSFDLHLSQA 335

BLAST of PI0021400 vs. ExPASy TrEMBL
Match: A0A5A7SWP9 (Protein Ycf2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold403G00260 PE=4 SV=1)

HSP 1 Score: 53.5 bits (127), Expect = 3.5e-04
Identity = 31/54 (57.41%), Postives = 37/54 (68.52%), Query Frame = 0

Query: 8   RMRRAYDKPYIEEKLVISRIWINAARGKMGRSNKEKENSPSSNMPSFDLHLSQA 62
           RM+R+  K Y E   V + IWI+A RGK+    K+KENS SS  PSFDLHLSQA
Sbjct: 466 RMKRSNAKEYREVTPVSTGIWIDALRGKVVEPRKDKENS-SSEWPSFDLHLSQA 518

BLAST of PI0021400 vs. ExPASy TrEMBL
Match: A0A5A7SN41 (DUF1985 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold34G001540 PE=4 SV=1)

HSP 1 Score: 53.5 bits (127), Expect = 3.5e-04
Identity = 31/54 (57.41%), Postives = 37/54 (68.52%), Query Frame = 0

Query: 8   RMRRAYDKPYIEEKLVISRIWINAARGKMGRSNKEKENSPSSNMPSFDLHLSQA 62
           RM+R+  K Y E   V + IWI+A RGK+    K+KENS SS  PSFDLHLSQA
Sbjct: 535 RMKRSNAKEYREVTPVSTGIWIDALRGKVVEPRKDKENS-SSEWPSFDLHLSQA 587

BLAST of PI0021400 vs. ExPASy TrEMBL
Match: A0A5D3BRJ0 (Protein Ycf2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold775G00450 PE=4 SV=1)

HSP 1 Score: 52.8 bits (125), Expect = 6.0e-04
Identity = 32/59 (54.24%), Postives = 38/59 (64.41%), Query Frame = 0

Query: 3   KDREERMRRAYDKPYIEEKLVISRIWINAARGKMGRSNKEKENSPSSNMPSFDLHLSQA 62
           K  E RM+R+  K Y E   V + IWI+A RGK+    K+KENS SS  PSFD HLSQA
Sbjct: 298 KHEELRMKRSNAKEYREVTPVSTEIWIDALRGKVVEPRKDKENS-SSEWPSFDPHLSQA 355

BLAST of PI0021400 vs. NCBI nr
Match: KAA0033325.1 (protein Ycf2-like [Cucumis melo var. makuwa] >TYK21581.1 protein Ycf2-like [Cucumis melo var. makuwa])

HSP 1 Score: 57.0 bits (136), Expect = 6.6e-05
Identity = 28/48 (58.33%), Postives = 36/48 (75.00%), Query Frame = 0

Query: 1   MAKDREERMRRAYDKPYIEEKLVISRIWINAARGKMGRSNKEKENSPS 49
           M +D+E+RM+R+ DK Y E K V + IWI+  RGK+G SNKEKENS S
Sbjct: 131 MVEDKEQRMKRSNDKSYREVKPVSTGIWIDVVRGKVGPSNKEKENSSS 178

BLAST of PI0021400 vs. NCBI nr
Match: KAA0042311.1 (hypothetical protein E6C27_scaffold824G001090 [Cucumis melo var. makuwa])

HSP 1 Score: 54.3 bits (129), Expect = 4.3e-04
Identity = 31/53 (58.49%), Postives = 37/53 (69.81%), Query Frame = 0

Query: 9   MRRAYDKPYIEEKLVISRIWINAARGKMGRSNKEKENSPSSNMPSFDLHLSQA 62
           M+R+  K Y E   V +RIWI+A RGK+    K+KENS SS  PSFDLHLSQA
Sbjct: 284 MKRSNAKEYREVTPVSTRIWIDALRGKVVELRKDKENS-SSEWPSFDLHLSQA 335

BLAST of PI0021400 vs. NCBI nr
Match: KAA0035754.1 (protein Ycf2-like [Cucumis melo var. makuwa])

HSP 1 Score: 53.5 bits (127), Expect = 7.3e-04
Identity = 31/54 (57.41%), Postives = 37/54 (68.52%), Query Frame = 0

Query: 8   RMRRAYDKPYIEEKLVISRIWINAARGKMGRSNKEKENSPSSNMPSFDLHLSQA 62
           RM+R+  K Y E   V + IWI+A RGK+    K+KENS SS  PSFDLHLSQA
Sbjct: 466 RMKRSNAKEYREVTPVSTGIWIDALRGKVVEPRKDKENS-SSEWPSFDLHLSQA 518

BLAST of PI0021400 vs. NCBI nr
Match: KAA0025875.1 (uncharacterized protein E6C27_scaffold34G001540 [Cucumis melo var. makuwa])

HSP 1 Score: 53.5 bits (127), Expect = 7.3e-04
Identity = 31/54 (57.41%), Postives = 37/54 (68.52%), Query Frame = 0

Query: 8   RMRRAYDKPYIEEKLVISRIWINAARGKMGRSNKEKENSPSSNMPSFDLHLSQA 62
           RM+R+  K Y E   V + IWI+A RGK+    K+KENS SS  PSFDLHLSQA
Sbjct: 535 RMKRSNAKEYREVTPVSTGIWIDALRGKVVEPRKDKENS-SSEWPSFDLHLSQA 587

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5A7SVZ43.2e-0558.33Protein Ycf2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold275G00... [more]
A0A5A7TL522.1e-0458.49DUF1985 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2... [more]
A0A5A7SWP93.5e-0457.41Protein Ycf2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold403G00... [more]
A0A5A7SN413.5e-0457.41DUF1985 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2... [more]
A0A5D3BRJ06.0e-0454.24Protein Ycf2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold775G00... [more]
Match NameE-valueIdentityDescription
KAA0033325.16.6e-0558.33protein Ycf2-like [Cucumis melo var. makuwa] >TYK21581.1 protein Ycf2-like [Cucu... [more]
KAA0042311.14.3e-0458.49hypothetical protein E6C27_scaffold824G001090 [Cucumis melo var. makuwa][more]
KAA0035754.17.3e-0457.41protein Ycf2-like [Cucumis melo var. makuwa][more]
KAA0025875.17.3e-0457.41uncharacterized protein E6C27_scaffold34G001540 [Cucumis melo var. makuwa][more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 43..61
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 34..61

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
PI0021400.1PI0021400.1mRNA