PI0021345 (gene) Melon (PI 482460) v1

Overview


Name	PI0021345
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	KH domain-containing protein
Location	chr01: 10213930 .. 10227517 (+)
RNA-Seq Expression	PI0021345
Synteny	PI0021345

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATATATATATATATATATATATATTAAATAAATAAATATAGATAGAAAGTTAAAGAAGAAGGCACAGCAGTTGTACTGTGCATTATTTTTCCACCGACGCCAGATTGATAAGCGTCTGGTCGGTATCGCCATCGCCGCCGTCTTCCACTTCAAATCCTGGCCGTATCCATATCCACTCACGTCTCCGGAGGGAGAGAAATGACGTCGTCTGCAGCCGGGATGTACATGGCTTTCTCTCCCTCTCCTTCGGCTCCTCACTCTCCTCATCTTCCTGGTCTTCGCTCTCCCTCCTCTGCATCTGCTGCTGCTATACTCGAGCAAGAAAAGTAACCATTCCACTTCTCTATTTTATTGCCTTTTTGTTTTCTTTTTTTCTTACTTTGTGAGATCTGGGATCTGTGTTCACCGATCTATGTGTTGGTTGTTATTTTTGTATCACTTTGGTTTTGTTTCTGACTTTTGGATGATTCTTGTACTTGATTTTGTATGATCGGTTGCTTCCTTACTTATCTGACTCACCTGCTACTTACTTAGCTCTTCAACTCATAAACTTGTTTATTTTGAACTTGTTTAGCTGAATATGTTACTTCTTGTTATTTGATTCTTGATTTGTTGTTTGATTATAGTTGTTGATGTAAGATCTGATATTTTGTTCCTCTTTTTTTGTTGCTTGGCTGTAGGCCAAACTGTCTTCATTCTGGAATTGTGTTTTTCTGTTAGTCTGTTAGTTGATTTGCATACGTTTATCTGGATGGACCGTTTAGCTGATTACAACTCACCTTGTTTTGCAGGTATCTCTCTGAGTTATTGGCAGAGCGACAGAAACTTAGTCCGTTTATGCCTGTGCTCCCTAATAGTTATCGCTTGCTGAACCAAGGTGAACTTCATAGCCTCGACGAGGTGGCTTTTTGTGAAGTAGTTTGCTTGCATCGACGTTTCTCGTTTCGTTGATTGGCTTAAAATATTTGGGATGATTTTTGCCCGTTGAAAATCAGAACATAGCATGATTGTTTGATATACAGTGTGACTGAACTAATCTAACAGAAGCTCAGTCCAATGAGTGCATGTGATGAGCAATTATCTGATCTAACTTTAATGATTATGCTTTCTTCTTCATTTGCCTTTCTGCTAATACCTACCTTGGATATTTAAAGTTGGCAGGGGTATGAAAACCCTATAACCTTGAAAATTAGGAACCGTGATGTGAACCCCTAACTATCAAATTCTAAAATCACCCCAATCAATTTGATTCCAGTCCAAAGGGAAGGATTAGATATTTATTGCCTTTTGATTGAATATGCAGAGATAAGAACTAATTAAGTTTGGACACTTCACAAGCATGTTGATCAGACCTCTTTGGATGTTCTTGGCATGCAACCCTAACTCAAGAATTGCAAATGATGATGAAGCTTTGTCATCAAATCCAAAAAATTTCATTTAGAAAACCAAAAACTGGATGTACAGGATTCATTGATATACCTAAACCCATTTTAAAGTTCATTCTATCCCTTAAGTCAAAAGATACACAATAAAATTAATAATCCTGATTAAGTTGTATAAAGTACCCAAGACACTTGAAATTAAATTATGTTTCCAAAAATTAGAACAAACGTTCTAACACAACCTAATCAATTTCATGCTATAGTATCATTCATAGCCAATTATAGAGCTTTTGATCAGTTTTCGTCCTTGGATCCTTTCGTTTGTGTTCATCTTTGTTTGTATGTGGGGATTAGTAGCTAACTGTAGCTTATTGCCCTTGACCATGTGACTGGTATTGGACATAAATTGCGAATGCATTGGTTCATATTACGTTTGCTTGTTGCTTTGCCTTTGTGCTAATACCTTGAATACTTGAGTTGGCAGGGGTATGAAGTGATAATGTGGCTTTGCATAAAACTTTATGTGTTTGTGATTTGTGAATACTGGAGGGTGATATTTGATGTATAAAGAACGCCCAAAGGAAATGACACACATGACAATTGACAAATGCACAATAGTACTGTAGTGATAGTGATAAACCACAGTGAATGACTGAATTCATTCAAACTTGAATATTTATTCCATGAAAAATGAGGATATAGTTTTTCCCTCTCTAAGATTGAGCAACCATACCTACCAGTTTATAAAAACTTTATTCCATGTTACATGGGTTGTATGTCTTGCATTTTTTGGATCGAGCTAGAAGCATATGAGTTTAGATGCAAGCTCACACGTAGGTGCTCTAGTAAGTATCCAGAAGTTCAGTAGCAAGGTTAATATATTTTTGAAGCAGTTGGAAGTCCCTTTTCTTAGTGTTTTGAAGAACTGATTCCTTTTTTTTTTTTTTTTTTTTAATTCCTTTTTATTTATTTTCCCATTGCCTTTGTATTTGCCTTTGTATAATTGTCTTACTTGGTTTCTTAACTTCCTGTATTCATAAATACCATATTTTTATGGAAATTCTAATATACCAATTAATCCTAACAATTATTTGGAACTTAATGTATTTTTTCTACATCTGCTGCCTTTTGTCTTCATTTGTTTTGAGTTTCTGCAGCGTATACAGTTTATTAACTTCCTTTTTCAGTGTTTGGTGGCAATATTACTTATTAATATTGCTCAATAGTATTGGGGTTCGTAACTTGATTTTGTTTCATTTTTCTTTTTTTACTTTTGAACATTAATTATATTTATGACGGATGTTTGTCACTGACTCAGAAGTAAAGGCACCTTTTTGTGTGTCCATTCTGTGGTAACTGCTAACTTTTTAACAAATGCGCTGACTGGTACATCTTGTTCTTGAAAATTGACATTTTTGGAGCAGAAATATTGCGTGTAACCACTCTATTGGGGAAGGCATCAGTTTTAGGTCAAAGTGGGCTTGAACATGCCAGCCCCCTGGCTTCTGGAGGAATATTTTCAAATGGAGGTGCTGACATGAGTGCATGGCCATCACGGTTTCAATCAGAAGTACGGACACTAACCATTAACATAACCTTGCTGTCCATCTAATTTACTGTACTTAAGAAGCATTCCTGACGCAAACTTTTTACATTTTTGCTAACTCATAACATTTATTTGAGTACACATAATCTAATTTCATTTGAGGACAGGTTCTCTAATTACAAAATGGGACCTAGTTTTTTCACTTGTGCGTTTTATTTTTTTACTTAAGTCTTTTAGTTTTTTTTTCAGCATCTGTAATGGTTCTAACAAATTAGTTCTCCACCTTCGGCCATCTTGATAAACAGGATGACGGTGTCCATTAAATTCTGAGGAGCTTACTTACCTTCAAATTTGTCTTTATGTGTTTGAAGGAAACTCTCTGCCCGATTAATAAGTTGGGTTGACTCAGTTTTTTTTCTTTTGTTTTTTTGTTTTTTAGTGACAAGGGTCTAGTATTGTAATATAGAGCGCTGACTCATTAGTTAATTTTGGTTTATCCCTTGTGTATCTTTGGTGAAGGAGTTTTCAAGAAACTTGGTTTCACACTTGGAATTTAAAATTACACAAATAAGTTGCCCGAAGAGTAGTTTATGTCAGTATTAGCACATTTATATTGTTGTATAAGGGTGTGTCTTCGTGAAAGAATGTACATTATCTTGTATGGACCCCAACCCCGGAAAGAGAAAAAAGAAATAGAGAAAAAGAAAAAAAAATGCTACTTTAAGTTCCCTGACAACATTTTGTGATTGATTCTGGGATTCCCTATACTCCTTCAAGCACCAAAATGTTCTCACTTTCTATGCATGATTATGATGTTCTTTATCAAGGTATGTAGTGTGTTCACTGTTCAGTGCTTTACTCTTTTCCCCTAGATTGCTGTCCTAGAATCTATGACTTTGATGGTATTGTTTCTGAAAATCTCCCATGTTTTTATTCTAAAGTTATGTTGGCTGTTCATTACATATCCGGATGATTGCCATTATGTTATTTCTCTGGTTTGAACTCTGTATATTGTTTTGATTTGCAGATGTCAGGTTTATTACAAGCATCATCAGCACAAAATTGGCTAAGTTCCCAAGGTAGTTCATCAGGTCTTATTGTGAAGAGAACCATCAGAGTAGATGTTCCTGTTGACAACTTTCCTAATGTATGAATTATATTGTGCTTTATATGTTTATCTATATCTTTTCTTTACATTATTTTTTCCTTGCTTACCATATTTTGCTAATGGAACTGAATTGAAATTTGTTTGTAGTATAACTTTGTCGGCCGCCTCCTTGGACCCAGGGGAAACTCTCTCAAGCGAGTGGAGGCAAGTACTGATTGTCGTGTTTTGATTAGAGGGCGTGGTAGCATTAAGGATCCAGCTAGGGTAAATTGCTATAAATTCTCATTTTCTTCTTAAGTTGCATATCATGATTCTGTTGCAAAACATTTTGCTTATGCCTGTCATGATTCATAAAATTCATTTGCAATTATATTATGTAGGGAAAAGAACAAATTATATCCCTAAACTTCTAAGATGGTTACAGTCTAGACTTAAGACTCTTAATTTGATCTATTACACTCTCATTAAGAATTTTCAATGTCACTTTTCCATTTAAGTAATTCAATCAACGTTTTTCACTAAATCTGTTTAGATTTCTGTTTTTCTGTTGAAAATTTCTAATCAGGGAATGATAGACAGAATGGTTCTAAGATAACTCCTATCTATAAATTTGATAACCTCTCTATGATTTTTTTAGAAGAAATTAATGTGAACGTTGGGAGGGAGAGACAGATCCTTCTATTATTTCTTCTATTTCTAGTTTTCTCAAAACCACTCACTCAGTCAGCTCATTCAAATGTCTCTCGTATAACTTCTTCCCCCTATTTTTATTTTCCCGGTTAATTCTCTCTCTCTCTTCCCCAGACCCCTTACCTCTCTTGTGATCTTAAACTTTTTATATTTATTTAGTGTTGAACTGTTGATAAAGTACAATAGTTAGCTTAATATTTAACTAAATCTTTTTATTATATTGCTGGTTTGTCATTAAATGTCTTACAGATTAACGCTTAAAAATATACTTGAAGGCTTTTGTATTTGAGTTGTTGCAAATCTTTGCCTTCGGAGTTCATTTTGTGATCCCCAAGTCTTGATGGAGACCTCATCTCTTTTATTTATTTATTTAGTTATCTATTTATATTTATATTTGTTATTTCTATTTTTTTTATTGCATTTGTTTGTATCACGGCTTTCATTTTCCATGTAAACAAAATAATTTTGTTGGTTAGATCATGACAAGTGACAATCACTCAAAGATGATTTCTTAGTTGCGCTAGTTATTGGTGAGCGTCTATTCCTTGCGAGCCTATCTAAGCCCTGTTTTTCAAGTTCTAGTGCCCGCTTTTGAGTCCAGCCTTTACCCCCATTTTTGTTCATCATTTCAATTTGCTAAATTCCGACATTATTAAAACAATATTGCCACATTGTGGGGTTCATCTTCCATGCCAGGTCCTCAAACAACTTGTCATGTTGGATTTTCATTATTCCTCTTCATAATTTATAAAAAAACATAGGAATAGTTTGAAGCATAGAAAAAAGATATATTTTAATCTGTGTCTAAACAGGCTTAAAGTGGATAACATTTTTTTTCCACAAATGGACGTCCAATTGTTAAGAATGAGAAACAAAGGGTAGTTATCAACCTTCTAGGCACATACACCTAAATGAATCTGCATCTTCTCCTGAACTCTCCTTCCTTTTTTCTTTTTCTAATAGGAAACAATATCATTTCATTGATAAGATTAAATTACAAACAAAGAAATTCGTATCCAATGGATTACAAAAAACTTCTTCAATTGGTCATGAGATCAAATAAACTCTACTTACAAAAAGGGGACCAATTTACGCTAAGAAAAAAAGAGCGCTAGGTTTGAGAAAAGCTTGGTAGTTTTTCCCCCTTATTTGTGAAGATTCTCGAGTTCCATCCAAGCCAAGTAGAACATAGGGTAAGCCTGGGTGAAATTAAGCCGAAGTATCCTCTTCTCCCTTTAAGGATGACTATTGAACAAAAGAGAGAGGATGTCCAGAAGAGCTGTTTGCCAACAACATTTGCCAAAAGGTAACCCCCAAAATATCTAGCTTGCTGACAGGCAGGCACCAGACAAGCAAATAGATTCAAGATTCCTCGGAAAATTTGCACATGATGCAACATTGAGGATAGATGGTGATCCATTTTGACCATAGGTAAAAATCATACACACTATAGAGCCTCTTTTAAATGCCTTTCAAGGTTGGGTCTTGGGTGAAATTGAGGCTCCTCCATCATCAAGCAAGACTCTTTTACTATAATTAAAAGACATGTTGGAAGTGAAATCTTTCTGCGTATGCCTCCTAAGAATTTTGGATGTATCACATCCCCTCGTGTACTAGGTGCAAGTCCGTTGGAGATCCGCCCAGGATTTCATGTGTCAGCTGTTGAAGAAGTCACACTGTTTGATTGAAAACCAAATGACAAACAAATTAATGCAAATGCATCAATAGTTTGAAACTGGCTTGCGAGTTACAAGAAATGATATAGTATAAGATGAAATCACTTGGAGAAGGGTGGAATGAAGCCATGTAAAATTAACTTCGGAGAAGAAAGATGTTATAGACCTAGAAAAAGAATGCAAAGGGATTGTCTCCCACCCAATAATCTCTCAAAGAAGATGTTAGTCCTTTTTTGAGCTCAACCTCTTGATCAAGGGTATATGCTGTAAAACTAAGAAGGTTATTGATCAAACTATCTTCAATTGTAAGTTCGTGGCAAAATACAATTTTGGTCCTAAAGTTTGAGTTTGGTGTCTGTTCAGTCTCTAAAGTTTAGAAAATAGTTCTAATGGTCTAATTAAGTTGGCTATTAATTGGCTAAGGAGTAATGAAAAAGTGATATGGCATGAAGGGTTGACAATTTTTACTTGAAATTTAATTTTGGGAAAAGTACCTTTTTATTCCTGGAGTTATTAGGAATAGGTGCATTTGGTCCCTAAAGTTTCAATCATTTTAGCCCCTTGGTTTTGCAAAATAGGTTAAAAAAGTTCTTCTGCCTATTTTAAATATTTTATTGAATTATTCTACATTTTAGTAGGCCATTTTTAAATTTTTTTAAAAAAAACATCTCTTTCCATCCACTCTCCCTCTCTCTTCTCCCTACTTCCGACTCCATACTATTCTTCTCTCTCCAATCTTCCTCTTCCTTCTTTTAAACTTCAAAGCTTCATTTTCTAAAAAAATTCATCACATCCTTGATCCTTTCCAACTTAAACAATCCATCAATCTCCATTTATCAATTAAATGGCGTCACCCATATGCAACAACAACAACTTGAATTTCAGTATGATCACTCTTCCATTAACCTCTCGGCCAGCAAGAATGTCAGACACTTGAATTTCAGTATGATCACTCTTCCATTAACCTCTCGGCCAGCAAGAATGTCAGACACATTTTTCGATTTTGAACCCATGTCTTGTGGATTTAGCTAATACTTGGCACAATGGTGCTATTGGTGATTATTTTAATGTACTTCAAACTAACATGGACTGTTTGGGAGGATTCATATGGATAAATTTATAAGATTTTTTGAGAAACTGTATTGGATTGGAAGGAGCATAAAAAGATTTCTGTCAGCTTACATTGCAAAAATAAGAGCAAGTGGATGTGTTCATTGATGTTGATGGAGAAGGGAAGAGGAAGACTGAGAGAGAAGAATGGCAGGAGACAGAGGATAGCAAATAGGGAAAGAGAAGGAAGTTTGAAGGTTAAAAGAAGGGGAGAGGAAGAAAGAGAGAGAAGAATGGTATGGAGTGGGAAGTAGGGGAGGTGAAAGAGAGGAGAGAGTAGATGGAAAGAGAGTGCATGTATTTTTTTAATTTAAAAATGGCGTATTAGAATTTAGAATAATTAAATAAAATATTTAAAATAGGCAAGAGGACCTTTTAACCATATTTTAGAGAACTGGGGACTAAAATGGCCTAATTGAAATCTTAGGGATCAAATGCAACTACTATTCCTAATAACTCAAGGACTAAAAATGTACTTTTTCCTTTAATCTTTTATTAATTTAAAACTATTTTAAGTAGCATATTTCTCACTCAACCATTTGCAGACTTCTCTTGTTCCATCTTCTTATTTCCTTCTTTGAACTGGGTACTGACTTTTTTCTTCATGAAAATATTGAACCGCTTTCTCATCCCGTTGCTCTACTAGCCAAAAACCAATCCCCTTTGTTGCCTTCTAAGAACGTCTGTGAGTTTTGGGATCTTTTTTCTTTCCTTTTTTCCCCCTTTTTGGGTGTAAAATGTTTAGAAAAGCTTGCTCTAGAATCAAATGCGGAGCTAGTCGTGAGCCAAGTTTCTATGGGCAGTGAAAGTTGCAACAATTTTTATCGCCTCCATTCAATGCCATGATTGATTTTCTACCTTCCAATGCTCATTAAAGAGTCTCAATTTGAAGCCTTATCAACTGTTTGACTCTGCAAATTGAAGCTTACTTTCTGCAATTTTTGCCTCCTCCGGTGCATCAATATAAATGATATAGTTTGCTAATTGCGAAACCCAAGAATGGTTCTATTGAAATGAGGATGATGGCCCCTTTTTGTACGCTAATAAAATGGTGGATAAGAAAACGAAGGAATTGAAGAAGGTAGAGCTGACAGAAGTAGAGAGGAAATAATGAAGAATGGTGAAAAGGGCAAAAAGTGCTGGACCACTACTTTCCAAAACGCAAATGATGGATGGTGATCAATGCCTGCAAGCTTTTGTTTGAGAAAAGAGCAAGGGGGGAAGAAGATGGAGAGGAAGATAAAGGAAAACAAGAAAGGAGAAATGCAATGCCATTTAAATTATTAAAAAATTACATTTCAAGTGAAAAATGCTACGTCATCCATGCTAATATCATTTTCTTGTTAGTCAAGTGTACCTTAATTGAGAGACCATTTTGAACTATTGTCTAATCTTTAGAGACTAAAACGTTGCTTTTGAAACGTCAAGTACTAAATAGACGTTAACCTCTTATACTACCACCTTTTCTGGATACTCTTCTCAGGACATTAATCCTTCCATTTTTCATATTAGTTCAACTTTTGTTCTCTTTAAATCTATGTATTTTCTCTTTTTAGAATTTTCTACTTATGTTTGATTGTTCAAATCTCCCTTATTTACTTTTTTCTCTATGTGTTGTCATGTATTGGCATTAGTCTCTCCTTTCATTTAATCAATGAAAAGTTTATTTTCCTGTTTAAGAAAATAGACGTTAAACTTAACTTCAGGGACCAAAAGTGTATTTTCCCTGAATTTTTAAAAAGAAGAAAAAAAGATGATTTGATGCATACTCACTATAGCCTCATCCATATAGCACTACTTTCCAAAGGGAATTGTCACAACCATTTTGTCAATAAGGTCATATATTAAGCTTGCATTGAGGGAAAAAAACATAAGGGGCATACAAAGAGTAATACTTGGGTGTAGCTTGGGCTAAACCCATCTCCATGTATCCTTTTCAATCACAGAGGGAAAATAAATATAAAAATGTATCTTTCTTAGGGGAAAAAACTTCACCACATGACAACTTATGATTGGACGCTTGGTAGGCTGCACAAAGGTGGGTGCAATTTGGGATGCACCATATAATTTTCACATACAAAAATGCCCAACTGAATGAAAGCCAAACTAGAAAGTAGAGCTCCAATCTGACAACATGGATCTAAAGGATAATTACCGAAGTTCTTATCTTATCTTATACATCAAAGCGCAAAGAGAAATATGAAACTTCACAGGAGACCAAACCGTCTTCCATGATATTTGAGATTCCCTTACATTCCTATTGTTTTTCACAAGCCAGAGGTCTCGTAGCACAAAACTTAAAGTCACAAAAGCAGCCCTCCTCAAGAAAGGTGAGGGGATGGAGAACCCACACCTCAACCTAAACAAGCAGTCTCTGGAGAAAACCTAAAACTCACATGTTTGGGGGAAAAAACAATTCCTGTTCAACAAGGCAAATCGGCAACTCCCAATAATTTGATTAGATCATACGTTCAACGACTCAAACACTCCTGCGCCCTATTATTATAAGTTTAATGAACCTTAAATTGAGAAGGAAACAAAGGTATGTTGAACTCTCACAATAGACACACTTGATAAATCAAGAATGGCCTTTCTGCAATTGTTAAGAATGGGAGACATTTTTGGTCCCTTTCTACAATTGAGTTTAATGAGGACGAACAATTGGGGTTATCACAAGGGAGGCCCTACAGAAGTAGTGGGAAAGACCTTACTTGTTCATTTAACCAACTAGTAGTTAATGGTGGCTGCATCTAATGGTTCATTTTACTAGTAGAGTAGTTTAATATGCTCTTTGCTGTTGTAAATTATTAGAGAACCCCTGGGAAGGATTAGACTTCCACTGAAGGAAATGGGTTCAATTACTCTCCGCATCATCAAAACTTGTCTGTGTCTAGAATTTGGCAAGATTAGGAAAAAGAAGATTGTCCTGGGTATGCTGTACGGTGTTTCAGAATTTCCCTTGGAACAAGATTATGTCTAGTACCTGTTGCTTGACCTCCAAGTCATTCATTTTTTTTTAAAGAAACAAGACTTTTTCACTGACGGAATGAAAAGAAGCTAACACTCAGAAGTACAATGAGACAAAAAGTTCCACTGCTGCTTGTGATAGTTTTCATTTCATTCCATATCTTCATTTATGTTAGAACATTTAACAAGTCAACCAAGTAATCGTGTGACCTATCCCAAATGTTCTCTATTCAAGTTTCTAGACCAATTCTGGTCCTGTGTACCTATTATTGAACCTTTTGTAACTTCAGGAATCAAATTCTTTCTGGTTTCCAATTGGGTGGCCGGGCTAGTGTCTTTTGGGTGAATGTTATCCAAATTTTTGCGTAAGAAATCTGGTTTGTGAAAAAATTAAAGAGAAGTGAGAGAGAAGCAGAAGGAGGCTGTAAAACTTGCATAAATTTTCTAAAAGCTCTGTCTTTTATTTTATTGTTTTTTCAAAATGTTATTCTAAATATGTATACTAAGTAACTTTTTTATGACCGTTGGAAGCTTTGTGCAATCTTCTGGTCTTCATGCGAGTATGGGTGCATTCCATATTTGACCTCCCATTCTGCAAGTTATCTTTTTGAGTAGTTTACAAAGTAGTTGGGATCTAGAGTTCTAAGCCACATATAGTAGTGGATGACGTTTCCAATTTTTTCTCCAGATCAAATGATGCATCACAAACCAATTTCTATATGTTTATCAAATCATGATTGAAAATATTTGGAAGTTTAATTTGGTCTTCCAAAATGTTGAGTGTGAAAATGTTGTGTTGCTTCTCTTCACTCTCTATCTCTCTCTTGATTGCTTGCACGCTCTAACATGAGAACTTTACAAGGATTTTTGTTTGTAGCATAGCCACACCAGTTCTTGTCTTCAAGGGAGATGGAATAACTTTGTTTAGTCTCCTTCAGGCATAAATTCTATATATACTATTGTGCATAATGATCTCTATTTAATTTTAAAGTAGCTTATACACCCTTGTTATGCTGGGGAGTCGACTTTTTTTCTGTAGCATTAAAATACAGAATTAGAATTCAGCATATGATGAAGGTGCCAAGCTTATACTATTGTTTGATGTCTTGTAGGAAGAAATGATGAGAGGAAAACCAGGTTATGAGCATTTGAATGAGCCTCTCCACATCCTAGTTGAGGCGGAATTGCCAGTTGAAATTATTGATGCTCGCCTCATGCAAGCCCGTGAGATTCTTGAGGACTTGCTCAAACCAATGGTGAGAATCTTTTGAGATCTTATATATCTTGGTTGCAATCTCGGCGACTTAATTGAACTTACTGATATTATTTACTTTTATTATTTCCTCTTCCCATAATTATATATTTAGGAAGAGTCTCATGACTTCTATAAGAAGCAACAGCTACGGGAACTAGCCATGCTTAATGGCACGCTTCGTGAGGAGGGCTCGCCTATGTCCAGTTCCGTGTCTCCCTTCCACAATAGCCTTGGAATGAAGAGAGCCAAAACTAGGGGGTAAATGGAATTACTGCTTCATAGAAGAGGCTTTTGGAGATCGTTTTCTGGTGTCTGGGAGTAATCAGCAGTCCCATTCCAAGGTGTTGCCTGCAGCAAATGCCTTCACTGCAATCGGGGCACTCGCACTCTTACGTTACGTGCAGGTTCTTACTAAAATTTATATGGTGTGTTTATGTAGTATTCGGAAGAGAAGGTAATGTACTGACATGGAAGTGTCAACCAGTTAAGTATTACTAGTGATTGGGGGGGGGCTATATATATATCTATATTTGTTGCTCTAGCAGTTAATGGTTTGAAAAATCTCTCCAACAATTTAATGTGTGTTATTTACTAGGCTTTTTTATAAGGTTATGATGGAAGTTTCGATATTATGTAGGATGGTGGGTTCTTTTGGGACTTCAAAAAGAAAAAAAGGCTAAGGCTTGTAAGCGAATGTGAGGGACAGAAACCATTGATTTATTAAGTTGTCTTTTGTTTCTGTTGGGTGTGTTTTGTACTAGGAAGAGTAGAAATCTTTTCCCCCTTCAAAAACATTCTTTATTTTTTCTTTCTTATATGATCTAGAGATTCCAAACCATTGGTCTACTATTTTCCCTCTTAAGTTCTCTATTATTATTAAATTCCATCCTGCTTTAAATCTTTTGCTTGAGGTGCAGTTTTGTACTCGGAATATTACAAGGTTGTATCTCAACTCATCCTTTACATTAGTAGTCTTTAAAGTATTTGAAATGCGTTTTTAAGGCCCATTCTACCATTGCCTTTGAAGAACTAGGCTTCATGTGCTTGAGAAGATGACATGTAGCTTCTCAAAATAAACCTTTTGGCACGGTAACAACCATGAACTTGGAGTGGGTGAGTTATATTTGGATTGAGGATAATTTGTTGACAGGTCAAAGCAGACAGTGAGCCTGAAGACGGTGCAGCTCGAACACCATTTTTGTGCTAAGGTTTGAATCATCTAGTCATTGTGCTTGAATTTCAAGTGTCAATATAATGAATTTGGATATGCTTATATGTAGGCCGAGCAGAGGCATAGCATGTCTTCAAATGCAATAAATGATGTTACTGTTAGATTCTAGACTTGCATTGCAAAGATCATAGGTGGTATGGTATAAAAAAATAGTTTTCTTTGAAATTAGCATCTGTGATGTTGTGAGTTTTACTTTGTTATAGACAACACAAGTATTTACTTTTATGAAATTGCATTATATTCGTCTCATCTTAGGAAGTAGACTTGTCAATTCCCCTGTTCTACCTAACCCTCGGTCTATCTCTGTGTTTTGAAATTTTGGATTGTTGGTTGGGGCTTTCCATGCATGTGTATTACATTTTCTCCCAGAAGTTTAGGCTTACAAATTTTGCTACTACTTTGAGCTTGAATACTATATTGGCAATTGTCCGGTGTTAAAATGGTTAGAAAGGTAGAAGCTTGGTCTTGTAAAAGATTAACAAACTTGCTCTTTTCTATTATCGGTTAGGCCCCTCTATTGTTTTGTAATTAAGTCTTACGTCTTTAATTAATGTAAAATGTTGTTTAGTAATAACATTAGGAAAATGAATGACTTATTGTTAATTGAATGTTTATTAACTTAA

mRNA sequence

ATATATATATATATATATATATATTAAATAAATAAATATAGATAGAAAGTTAAAGAAGAAGGCACAGCAGTTGTACTGTGCATTATTTTTCCACCGACGCCAGATTGATAAGCGTCTGGTCGGTATCGCCATCGCCGCCGTCTTCCACTTCAAATCCTGGCCGTATCCATATCCACTCACGTCTCCGGAGGGAGAGAAATGACGTCGTCTGCAGCCGGGATGTACATGGCTTTCTCTCCCTCTCCTTCGGCTCCTCACTCTCCTCATCTTCCTGGTCTTCGCTCTCCCTCCTCTGCATCTGCTGCTGCTATACTCGAGCAAGAAAAGTATCTCTCTGAGTTATTGGCAGAGCGACAGAAACTTAGTCCGTTTATGCCTGTGCTCCCTAATAGTTATCGCTTGCTGAACCAAGAAATATTGCGTGTAACCACTCTATTGGGGAAGGCATCAGTTTTAGGTCAAAGTGGGCTTGAACATGCCAGCCCCCTGGCTTCTGGAGGAATATTTTCAAATGGAGGTGCTGACATGAGTGCATGGCCATCACGGTTTCAATCAGAAATGTCAGGTTTATTACAAGCATCATCAGCACAAAATTGGCTAAGTTCCCAAGGTAGTTCATCAGGTCTTATTGTGAAGAGAACCATCAGAGTAGATGTTCCTGTTGACAACTTTCCTAATTATAACTTTGTCGGCCGCCTCCTTGGACCCAGGGGAAACTCTCTCAAGCGAGTGGAGGCAAGTACTGATTGTCGTGTTTTGATTAGAGGGCGTGGTAGCATTAAGGATCCAGCTAGGGAAGAAATGATGAGAGGAAAACCAGGTTATGAGCATTTGAATGAGCCTCTCCACATCCTAGTTGAGGCGGAATTGCCAGTTGAAATTATTGATGCTCGCCTCATGCAAGCCCGTGAGATTCTTGAGGACTTGCTCAAACCAATGGAAGAGTCTCATGACTTCTATAAGAAGCAACAGCTACGGGAACTAGCCATGCTTAATGGCACGCTTCGTGAGGAGGGCTCGCCTATGTCCAGTTCCGTGTCTCCCTTCCACAATAGCCTTGGAATGAAGAGAGCCAAAACTAGGGGGTAAATGGAATTACTGCTTCATAGAAGAGGCTTTTGGAGATCGTTTTCTGGTGTCTGGGAGTAATCAGCAGTCCCATTCCAAGGTGTTGCCTGCAGCAAATGCCTTCACTGCAATCGGGGCACTCGCACTCTTACGTTACGTGCAGGTTCTTACTAAAATTTATATGGTGTGTTTATGTAGTATTCGGAAGAGAAGGTAATGTACTGACATGGAAGTGTCAACCAGTTAAGTATTACTAGTGATTGGGGGGGGGCTATATATATATCTATATTTGTTGCTCTAGCAGTTAATGGTTTGAAAAATCTCTCCAACAATTTAATGTGTGTTATTTACTAGGCTTTTTTATAAGGTTATGATGGAAGTTTCGATATTATGTAGGATGGTGGGTTCTTTTGGGACTTCAAAAAGAAAAAAAGGCTAAGGCTTGTAAGCGAATGTGAGGGACAGAAACCATTGATTTATTAAGTTGTCTTTTGTTTCTGTTGGGTGTGTTTTGTACTAGGAAGAGTAGAAATCTTTTCCCCCTTCAAAAACATTCTTTATTTTTTCTTTCTTATATGATCTAGAGATTCCAAACCATTGGTCTACTATTTTCCCTCTTAAGTTCTCTATTATTATTAAATTCCATCCTGCTTTAAATCTTTTGCTTGAGGTGCAGTTTTGTACTCGGAATATTACAAGGTTGTATCTCAACTCATCCTTTACATTAGTAGTCTTTAAAGTATTTGAAATGCGTTTTTAAGGCCCATTCTACCATTGCCTTTGAAGAACTAGGCTTCATGTGCTTGAGAAGATGACATGTAGCTTCTCAAAATAAACCTTTTGGCACGGTAACAACCATGAACTTGGAGTGGGTGAGTTATATTTGGATTGAGGATAATTTGTTGACAGGTCAAAGCAGACAGTGAGCCTGAAGACGGTGCAGCTCGAACACCATTTTTGTGCTAAGGTTTGAATCATCTAGTCATTGTGCTTGAATTTCAAGTGTCAATATAATGAATTTGGATATGCTTATATGTAGGCCGAGCAGAGGCATAGCATGTCTTCAAATGCAATAAATGATGTTACTGTTAGATTCTAGACTTGCATTGCAAAGATCATAGGTGGTATGGTATAAAAAAATAGTTTTCTTTGAAATTAGCATCTGTGATGTTGTGAGTTTTACTTTGTTATAGACAACACAAGTATTTACTTTTATGAAATTGCATTATATTCGTCTCATCTTAGGAAGTAGACTTGTCAATTCCCCTGTTCTACCTAACCCTCGGTCTATCTCTGTGTTTTGAAATTTTGGATTGTTGGTTGGGGCTTTCCATGCATGTGTATTACATTTTCTCCCAGAAGTTTAGGCTTACAAATTTTGCTACTACTTTGAGCTTGAATACTATATTGGCAATTGTCCGGTGTTAAAATGGTTAGAAAGGTAGAAGCTTGGTCTTGTAAAAGATTAACAAACTTGCTCTTTTCTATTATCGGTTAGGCCCCTCTATTGTTTTGTAATTAAGTCTTACGTCTTTAATTAATGTAAAATGTTGTTTAGTAATAACATTAGGAAAATGAATGACTTATTGTTAATTGAATGTTTATTAACTTAA

Coding sequence (CDS)

ATGACGTCGTCTGCAGCCGGGATGTACATGGCTTTCTCTCCCTCTCCTTCGGCTCCTCACTCTCCTCATCTTCCTGGTCTTCGCTCTCCCTCCTCTGCATCTGCTGCTGCTATACTCGAGCAAGAAAAGTATCTCTCTGAGTTATTGGCAGAGCGACAGAAACTTAGTCCGTTTATGCCTGTGCTCCCTAATAGTTATCGCTTGCTGAACCAAGAAATATTGCGTGTAACCACTCTATTGGGGAAGGCATCAGTTTTAGGTCAAAGTGGGCTTGAACATGCCAGCCCCCTGGCTTCTGGAGGAATATTTTCAAATGGAGGTGCTGACATGAGTGCATGGCCATCACGGTTTCAATCAGAAATGTCAGGTTTATTACAAGCATCATCAGCACAAAATTGGCTAAGTTCCCAAGGTAGTTCATCAGGTCTTATTGTGAAGAGAACCATCAGAGTAGATGTTCCTGTTGACAACTTTCCTAATTATAACTTTGTCGGCCGCCTCCTTGGACCCAGGGGAAACTCTCTCAAGCGAGTGGAGGCAAGTACTGATTGTCGTGTTTTGATTAGAGGGCGTGGTAGCATTAAGGATCCAGCTAGGGAAGAAATGATGAGAGGAAAACCAGGTTATGAGCATTTGAATGAGCCTCTCCACATCCTAGTTGAGGCGGAATTGCCAGTTGAAATTATTGATGCTCGCCTCATGCAAGCCCGTGAGATTCTTGAGGACTTGCTCAAACCAATGGAAGAGTCTCATGACTTCTATAAGAAGCAACAGCTACGGGAACTAGCCATGCTTAATGGCACGCTTCGTGAGGAGGGCTCGCCTATGTCCAGTTCCGTGTCTCCCTTCCACAATAGCCTTGGAATGAAGAGAGCCAAAACTAGGGGGTAA

Protein sequence

MTSSAAGMYMAFSPSPSAPHSPHLPGLRSPSSASAAAILEQEKYLSELLAERQKLSPFMPVLPNSYRLLNQEILRVTTLLGKASVLGQSGLEHASPLASGGIFSNGGADMSAWPSRFQSEMSGLLQASSAQNWLSSQGSSSGLIVKRTIRVDVPVDNFPNYNFVGRLLGPRGNSLKRVEASTDCRVLIRGRGSIKDPAREEMMRGKPGYEHLNEPLHILVEAELPVEIIDARLMQAREILEDLLKPMEESHDFYKKQQLRELAMLNGTLREEGSPMSSSVSPFHNSLGMKRAKTRG

Homology

[Close]

BLAST of PI0021345 vs. ExPASy Swiss-Prot
Match: Q9FKT4 (KH domain-containing protein At5g56140 OS=Arabidopsis thaliana OX=3702 GN=At5g56140 PE=2 SV=1)

HSP 1 Score: 419.1 bits (1076), Expect = 4.2e-116
Identity = 225/294 (76.53%), Postives = 251/294 (85.37%), Query Frame = 0


Query: 7   GMYMAFSPS----PSAPHSPHLP-GLRSPSSASAAAILEQEKYLSELLAERQKLSPFMPV 66
           G +M +S S    PSAP SP+   GLRS SS      +EQEKYLSELLAER KL+PF+PV
Sbjct: 27  GRFMTYSSSLSVPPSAPQSPNYSGGLRSQSS----VFVEQEKYLSELLAERHKLTPFLPV 86

Query: 67  LPNSYRLLNQEILRVTTLLGKASVLGQSGLEHASPLASGGIFSNGGADMSAWPSRFQSEM 126
           LP+++RLLNQEILRVTTLL  A+VL QSGL+H SPLASGGIF N  ADM+ W S+F SE 
Sbjct: 87  LPHAFRLLNQEILRVTTLLENATVLSQSGLDHPSPLASGGIFQNARADMNGWASQFPSER 146

Query: 127 SGLLQASSAQNWLSSQGSSSGLIVKRTIRVDVPVDNFPNYNFVGRLLGPRGNSLKRVEAS 186
           S  + +S   NWL+S GSSSGLI KRTIRVD+PVDN+PN+NFVGRLLGPRGNSLKRVEAS
Sbjct: 147 S--VPSSPGPNWLNSPGSSSGLIAKRTIRVDIPVDNYPNFNFVGRLLGPRGNSLKRVEAS 206

Query: 187 TDCRVLIRGRGSIKDPAREEMMRGKPGYEHLNEPLHILVEAELPVEIIDARLMQAREILE 246
           TDCRVLIRGRGSIKDP +EEMMRGKPGYEHLNEPLHILVEAELP+EI+DARLMQAREIL+
Sbjct: 207 TDCRVLIRGRGSIKDPIKEEMMRGKPGYEHLNEPLHILVEAELPIEIVDARLMQAREILD 266

Query: 247 DLLKPMEESHDFYKKQQLRELAMLNGTLREEGSPMSSSVSPFHNSLGMKRAKTR 296
           DLL PMEE+HD YKKQQLRELA+LNGTLREEGSPMS SVSP+ NSLGMKRAKTR
Sbjct: 267 DLLTPMEETHDMYKKQQLRELALLNGTLREEGSPMSGSVSPY-NSLGMKRAKTR 313

[Close]

BLAST of PI0021345 vs. ExPASy Swiss-Prot
Match: Q0WLR1 (KH domain-containing protein At4g26480 OS=Arabidopsis thaliana OX=3702 GN=At4g26480 PE=2 SV=1)

HSP 1 Score: 403.3 bits (1035), Expect = 2.4e-111
Identity = 219/298 (73.49%), Postives = 248/298 (83.22%), Query Frame = 0


Query: 4   SAAGMYMAFSP----SPSAPHSPHLP-GLRSPSSASAAAILEQEKYLSELLAERQKLSPF 63
           S  G ++ + P     PSAP SP+   GLRS  S     ++EQEKYLSELLAER KL+PF
Sbjct: 20  SGGGRFVTYPPPLSVPPSAPQSPNFSGGLRSQPS----FLVEQEKYLSELLAERHKLTPF 79

Query: 64  MPVLPNSYRLLNQEILRVTTLLGKASVLGQSGLEHASPLASGGIFSNGGADMSAWPSRFQ 123
           +PVLP+  RL+NQEILRVTTLL  A  L QS  +H SPLASGGIF N  ADM+ W S+F 
Sbjct: 80  LPVLPHVCRLMNQEILRVTTLLENA--LSQSRFDHPSPLASGGIFQNSRADMNGWASQFP 139

Query: 124 SEMSGLLQASSAQNWLSSQGSSSGLIVKRTIRVDVPVDNFPNYNFVGRLLGPRGNSLKRV 183
           SE S  + +S A NWL+S GSSSGLIVKRTIRVD+PVD +PNYNFVGRLLGPRGNSLKRV
Sbjct: 140 SERS--VSSSPAPNWLNSPGSSSGLIVKRTIRVDIPVDKYPNYNFVGRLLGPRGNSLKRV 199

Query: 184 EASTDCRVLIRGRGSIKDPAREEMMRGKPGYEHLNEPLHILVEAELPVEIIDARLMQARE 243
           EASTDCRVLIRGRGSIKDP +E+MMRGKPGYEHLNEPLHILVEAELP+EI+DARLMQARE
Sbjct: 200 EASTDCRVLIRGRGSIKDPIKEDMMRGKPGYEHLNEPLHILVEAELPIEIVDARLMQARE 259

Query: 244 ILEDLLKPMEESHDFYKKQQLRELAMLNGTLREEGSPMSSSVSPFHNSLGMKRAKTRG 297
           IL+DLL P+EE+HDFYKKQQLRELA+LNG+LREEGSPMS S+SP+ NSLGMKRAKTRG
Sbjct: 260 ILDDLLTPVEETHDFYKKQQLRELALLNGSLREEGSPMSGSISPY-NSLGMKRAKTRG 308

[Close]

BLAST of PI0021345 vs. ExPASy Swiss-Prot
Match: Q75GR5 (KH domain-containing protein SPIN1 OS=Oryza sativa subsp. japonica OX=39947 GN=SPIN1 PE=1 SV=1)

HSP 1 Score: 266.2 bits (679), Expect = 4.6e-70
Identity = 154/283 (54.42%), Postives = 195/283 (68.90%), Query Frame = 0


Query: 24  LPGLRSPSSASAAAILEQ---------EKYLSELLAERQKLSPFMPVLPNSYRLLNQEIL 83
           + GL SP  + A  +  Q          +YL+ELLAE QKL PFM VLP   +LL+QEI+
Sbjct: 1   MSGLYSPGFSPARNLSPQIRSNPTDVDSQYLAELLAEHQKLGPFMQVLPICSKLLSQEIM 60

Query: 84  RVTTLLGKASV--LGQSGLEHASPLASGGIFSN-GGADMSAWPSRFQSEMSGLLQASSAQ 143
           RV++++         +      SP++S    SN  G   S W    Q E  G  Q +S  
Sbjct: 61  RVSSIVHNHGFGDFDRHRFRSPSPMSSPNPRSNRSGNGFSPWNGLHQ-ERLGFPQGTS-M 120

Query: 144 NWLSSQGSSSGLIVKRTIRVDVPVDNFPNYNFVGRLLGPRGNSLKRVEASTDCRVLIRGR 203
           +W  +  S S  +VK+ +R+DVPVD++PN+NFVGR+LGPRGNSLKRVEAST CRV IRG+
Sbjct: 121 DWQGAPPSPSSHVVKKILRLDVPVDSYPNFNFVGRILGPRGNSLKRVEASTGCRVFIRGK 180

Query: 204 GSIKDPAREEMMRGKPGYEHLNEPLHILVEAELPVEIIDARLMQAREILEDLLKPMEESH 263
           GSIKDP +E+ +RGKPGYEHL++PLHIL+EAE P  IIDARL  A+E++E+LLKP++ES 
Sbjct: 181 GSIKDPGKEDKLRGKPGYEHLSDPLHILIEAEFPASIIDARLRHAQEVIEELLKPVDESQ 240

Query: 264 DFYKKQQLRELAMLNGTLREEGSPMSSSVSPFHNSLGMKRAKT 295
           DFYK+QQLRELAMLN TLRE+ SP   SVSPF N  GMKRAKT
Sbjct: 241 DFYKRQQLRELAMLNSTLRED-SPHPGSVSPFSNG-GMKRAKT 279

[Close]

BLAST of PI0021345 vs. ExPASy Swiss-Prot
Match: Q8GYR4 (KH domain-containing protein At3g08620 OS=Arabidopsis thaliana OX=3702 GN=At3g08620 PE=2 SV=1)

HSP 1 Score: 263.8 bits (673), Expect = 2.3e-69
Identity = 152/289 (52.60%), Postives = 191/289 (66.09%), Query Frame = 0


Query: 9   YMAFSPSPSAPHSPHLPGLRSPSSASAAAILEQEKYLSELLAERQKLSPFMPVLPNSYRL 68
           Y  FSPS +A      P +R+PSS          +Y+S+LLAE QKL PFM VLP   RL
Sbjct: 7   YNNFSPSRAAS-----PQIRTPSSD------VDSQYISQLLAEHQKLGPFMQVLPICSRL 66

Query: 69  LNQEILRVTTLLGKASVLGQSGLEH--ASPLASGGIFSN-GGADMSAWPSRFQSEMSGLL 128
           LNQEI R+T ++          L H   SP+AS  + SN  G  +  W       + G  
Sbjct: 67  LNQEIFRITGMMPNQGFTDFDRLRHRSPSPMASPNLMSNVSGGGLGGWNGLPPERIGG-- 126

Query: 129 QASSAQNWLSSQGSSSGLIVKRTIRVDVPVDNFPNYNFVGRLLGPRGNSLKRVEASTDCR 188
               A  W  +  S S   VKR +R+D+PVD +PN+NFVGRLLGPRGNSLKRVEA+T CR
Sbjct: 127 PHGMAMEWQGAPASPSSYPVKRILRLDLPVDTYPNFNFVGRLLGPRGNSLKRVEATTGCR 186

Query: 189 VLIRGRGSIKDPAREEMMRGKPGYEHLNEPLHILVEAELPVEIIDARLMQAREILEDLLK 248
           V IRG+GSIKDP +EE ++GKPGYEHLNE LHIL+EA+LP++I+D +L QA+EI+E+L+K
Sbjct: 187 VYIRGKGSIKDPEKEEKLKGKPGYEHLNEQLHILIEADLPIDIVDIKLRQAQEIIEELVK 246

Query: 249 PMEESHDFYKKQQLRELAMLNGTLREEGSPMSSSVSPFHNSLGMKRAKT 295
           P++ES D+ K+QQLRELA+LN  LRE     S SVSPF NS  MKR KT
Sbjct: 247 PVDESQDYIKRQQLRELALLNSNLRENSPGPSGSVSPF-NSNAMKRPKT 281

[Close]

BLAST of PI0021345 vs. ExPASy Swiss-Prot
Match: Q9ZVI3 (KH domain-containing protein At2g38610 OS=Arabidopsis thaliana OX=3702 GN=At2g38610 PE=1 SV=1)

HSP 1 Score: 256.1 bits (653), Expect = 4.7e-67
Identity = 146/277 (52.71%), Postives = 189/277 (68.23%), Query Frame = 0


Query: 29  SPSSASAAAI-----LEQEKYLSELLAERQKLSPFMPVLPNSYRLLNQEILRVTTLLGKA 88
           SP+ A++  I     ++  +YL+ELLAE QKL+PFM VLP   RLLNQE+ RV+ ++   
Sbjct: 12  SPARAASPQIRSTPEIDSSQYLTELLAEHQKLTPFMQVLPICSRLLNQEMFRVSGMMSNQ 71

Query: 89  SVLGQSGLEH--ASPLASGGIFSN-GGADMSAWPSRFQSEMSGLLQASSAQNWLSSQGSS 148
                  L H   SP+AS  + SN     +  W    Q  +SG        +W  + GS 
Sbjct: 72  GFGDFDRLRHRSPSPMASSNLMSNVSNTGLGGWNGLSQERLSG--TPGMTMDWQGAPGSP 131

Query: 149 SGLIVKRTIRVDVPVDNFPNYNFVGRLLGPRGNSLKRVEASTDCRVLIRGRGSIKDPARE 208
           S   VKR +R+++PVDN+PN+NFVGRLLGPRGNSLKRVEA+T CRV IRG+GSIKDP +E
Sbjct: 132 SSYTVKRILRLEIPVDNYPNFNFVGRLLGPRGNSLKRVEATTGCRVFIRGKGSIKDPEKE 191

Query: 209 EMMRGKPGYEHLNEPLHILVEAELPVEIIDARLMQAREILEDLLKPMEESHDFYKKQQLR 268
           + +RG+PGYEHLNE LHIL+EA+LP  I++ RL QA+EI+E+LLKP++ES DF K+QQLR
Sbjct: 192 DKLRGRPGYEHLNEQLHILIEADLPASIVEIRLRQAQEIIEELLKPVDESQDFIKRQQLR 251

Query: 269 ELAMLN-GTLREE--GSPMSSSVSPFHNSLGMKRAKT 295
           ELA+LN   LREE  G     SVSPF++S   KR KT
Sbjct: 252 ELALLNSNNLREESPGPSGGGSVSPFNSS--GKRPKT 284

[Close]

BLAST of PI0021345 vs. ExPASy TrEMBL
Match: A0A0A0K3M6 (KH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G188690 PE=4 SV=1)

HSP 1 Score: 563.5 bits (1451), Expect = 5.1e-157
Identity = 293/296 (98.99%), Postives = 295/296 (99.66%), Query Frame = 0


Query: 1   MTSSAAGMYMAFSPSPSAPHSPHLPGLRSPSSASAAAILEQEKYLSELLAERQKLSPFMP 60
           MTSSAAGMYMAFSPSPSAPHSPHLPGLRSPSSASAAAILEQEKYLSELLAERQKLSPFMP
Sbjct: 1   MTSSAAGMYMAFSPSPSAPHSPHLPGLRSPSSASAAAILEQEKYLSELLAERQKLSPFMP 60

Query: 61  VLPNSYRLLNQEILRVTTLLGKASVLGQSGLEHASPLASGGIFSNGGADMSAWPSRFQSE 120
           VLPNSYRLLNQEILRVTTLLGKASVLGQSGLEHASPLASGGIFSNGGADMSAWPSRFQSE
Sbjct: 61  VLPNSYRLLNQEILRVTTLLGKASVLGQSGLEHASPLASGGIFSNGGADMSAWPSRFQSE 120

Query: 121 MSGLLQASSAQNWLSSQGSSSGLIVKRTIRVDVPVDNFPNYNFVGRLLGPRGNSLKRVEA 180
           MSGLLQASSAQNWL+SQGSSSGLIVKRTIRVDVPV+ FPNYNFVGRLLGPRGNSLKRVEA
Sbjct: 121 MSGLLQASSAQNWLTSQGSSSGLIVKRTIRVDVPVETFPNYNFVGRLLGPRGNSLKRVEA 180

Query: 181 STDCRVLIRGRGSIKDPAREEMMRGKPGYEHLNEPLHILVEAELPVEIIDARLMQAREIL 240
           STDCRVLIRGRGSIKDPAREEMMRGKPGYEHLNEPLHILVEAELPVEIIDARLMQAREIL
Sbjct: 181 STDCRVLIRGRGSIKDPAREEMMRGKPGYEHLNEPLHILVEAELPVEIIDARLMQAREIL 240

Query: 241 EDLLKPMEESHDFYKKQQLRELAMLNGTLREEGSPMSSSVSPFHNSLGMKRAKTRG 297
           EDLLKPMEESHDFYKKQQLRELAMLNGTLREEGSPMSSSVSPFHNSLGMKRAKTRG
Sbjct: 241 EDLLKPMEESHDFYKKQQLRELAMLNGTLREEGSPMSSSVSPFHNSLGMKRAKTRG 296

[Close]

BLAST of PI0021345 vs. ExPASy TrEMBL
Match: A0A1S3BI94 (KH domain-containing protein At5g56140 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103490185 PE=4 SV=1)

HSP 1 Score: 560.5 bits (1443), Expect = 4.3e-156
Identity = 292/296 (98.65%), Postives = 293/296 (98.99%), Query Frame = 0


Query: 1   MTSSAAGMYMAFSPSPSAPHSPHLPGLRSPSSASAAAILEQEKYLSELLAERQKLSPFMP 60
           MTSSAAGMYMAFSPSPSAPHSPHLPGLRSPSSASAAAIL   +YLSELLAERQKLSPFMP
Sbjct: 1   MTSSAAGMYMAFSPSPSAPHSPHLPGLRSPSSASAAAILXXXRYLSELLAERQKLSPFMP 60

Query: 61  VLPNSYRLLNQEILRVTTLLGKASVLGQSGLEHASPLASGGIFSNGGADMSAWPSRFQSE 120
           VLPNSYRLLNQEILRVTTLLGKASVLGQSGLEHASPLASGGIFSNGGADMSAWPSRFQSE
Sbjct: 61  VLPNSYRLLNQEILRVTTLLGKASVLGQSGLEHASPLASGGIFSNGGADMSAWPSRFQSE 120

Query: 121 MSGLLQASSAQNWLSSQGSSSGLIVKRTIRVDVPVDNFPNYNFVGRLLGPRGNSLKRVEA 180
           MSGLLQASSAQNWLSSQGSSSGLIVKRTIRVDVPVDNFPNYNFVGRLLGPRGNSLKRVEA
Sbjct: 121 MSGLLQASSAQNWLSSQGSSSGLIVKRTIRVDVPVDNFPNYNFVGRLLGPRGNSLKRVEA 180

Query: 181 STDCRVLIRGRGSIKDPAREEMMRGKPGYEHLNEPLHILVEAELPVEIIDARLMQAREIL 240
           STDCRVLIRGRGSIKDPAREEMMRGKPGYEHLNEPLHILVEAELPVEIIDARLMQAREIL
Sbjct: 181 STDCRVLIRGRGSIKDPAREEMMRGKPGYEHLNEPLHILVEAELPVEIIDARLMQAREIL 240

Query: 241 EDLLKPMEESHDFYKKQQLRELAMLNGTLREEGSPMSSSVSPFHNSLGMKRAKTRG 297
           EDLLKPMEESHDFYKKQQLRELAMLNGTLREEGSPMSSSVSPFHNSLGMKRAKTRG
Sbjct: 241 EDLLKPMEESHDFYKKQQLRELAMLNGTLREEGSPMSSSVSPFHNSLGMKRAKTRG 296

[Close]

BLAST of PI0021345 vs. ExPASy TrEMBL
Match: A0A6J1CCS9 (KH domain-containing protein At5g56140-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC111010397 PE=4 SV=1)

HSP 1 Score: 552.4 bits (1422), Expect = 1.2e-153
Identity = 284/296 (95.95%), Postives = 293/296 (98.99%), Query Frame = 0


Query: 1   MTSSAAGMYMAFSPSPSAPHSPHLPGLRSPSSASAAAILEQEKYLSELLAERQKLSPFMP 60
           MTSSA GMYMAFSPSPSAPHSPHLPGLRSPSSASAAA+LEQEKYLSELLAERQKLSPFMP
Sbjct: 9   MTSSAGGMYMAFSPSPSAPHSPHLPGLRSPSSASAAALLEQEKYLSELLAERQKLSPFMP 68

Query: 61  VLPNSYRLLNQEILRVTTLLGKASVLGQSGLEHASPLASGGIFSNGGADMSAWPSRFQSE 120
           VLPNSYRLL+QEILRVTTLLGKASVLGQSGLEHASPLASGGIFSNGGADM+ WPSRFQSE
Sbjct: 69  VLPNSYRLLSQEILRVTTLLGKASVLGQSGLEHASPLASGGIFSNGGADMNGWPSRFQSE 128

Query: 121 MSGLLQASSAQNWLSSQGSSSGLIVKRTIRVDVPVDNFPNYNFVGRLLGPRGNSLKRVEA 180
           MSGLLQ SSAQNWLSSQGSSSGLIVKRTIRVDVPVDN+PNYNFVGRLLGPRGNSLKRVEA
Sbjct: 129 MSGLLQPSSAQNWLSSQGSSSGLIVKRTIRVDVPVDNYPNYNFVGRLLGPRGNSLKRVEA 188

Query: 181 STDCRVLIRGRGSIKDPAREEMMRGKPGYEHLNEPLHILVEAELPVEIIDARLMQAREIL 240
           STDCRVLIRGRGSIKDPAREEMMRGKPGYEHLNEPLHILVEAELPVEIIDARL+QA+EIL
Sbjct: 189 STDCRVLIRGRGSIKDPAREEMMRGKPGYEHLNEPLHILVEAELPVEIIDARLLQAKEIL 248

Query: 241 EDLLKPMEESHDFYKKQQLRELAMLNGTLREEGSPMSSSVSPFHNSLGMKRAKTRG 297
           +DLLKP++ESHDFYKKQQLRELAMLNGTLREEGSPMSSSVSPFHNSLGMKRAKTRG
Sbjct: 249 QDLLKPIDESHDFYKKQQLRELAMLNGTLREEGSPMSSSVSPFHNSLGMKRAKTRG 304

[Close]

BLAST of PI0021345 vs. ExPASy TrEMBL
Match: A0A1S4DWW8 (KH domain-containing protein At5g56140 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103490185 PE=4 SV=1)

HSP 1 Score: 544.3 bits (1401), Expect = 3.2e-151
Identity = 286/296 (96.62%), Postives = 287/296 (96.96%), Query Frame = 0


Query: 1   MTSSAAGMYMAFSPSPSAPHSPHLPGLRSPSSASAAAILEQEKYLSELLAERQKLSPFMP 60
           MTSSAAGMYMAFSPSPSAPHSPHLPGLRSPSSA         +YLSELLAERQKLSPFMP
Sbjct: 1   MTSSAAGMYMAFSPSPSAPHSPHLPGLRSPSSALFC------RYLSELLAERQKLSPFMP 60

Query: 61  VLPNSYRLLNQEILRVTTLLGKASVLGQSGLEHASPLASGGIFSNGGADMSAWPSRFQSE 120
           VLPNSYRLLNQEILRVTTLLGKASVLGQSGLEHASPLASGGIFSNGGADMSAWPSRFQSE
Sbjct: 61  VLPNSYRLLNQEILRVTTLLGKASVLGQSGLEHASPLASGGIFSNGGADMSAWPSRFQSE 120

Query: 121 MSGLLQASSAQNWLSSQGSSSGLIVKRTIRVDVPVDNFPNYNFVGRLLGPRGNSLKRVEA 180
           MSGLLQASSAQNWLSSQGSSSGLIVKRTIRVDVPVDNFPNYNFVGRLLGPRGNSLKRVEA
Sbjct: 121 MSGLLQASSAQNWLSSQGSSSGLIVKRTIRVDVPVDNFPNYNFVGRLLGPRGNSLKRVEA 180

Query: 181 STDCRVLIRGRGSIKDPAREEMMRGKPGYEHLNEPLHILVEAELPVEIIDARLMQAREIL 240
           STDCRVLIRGRGSIKDPAREEMMRGKPGYEHLNEPLHILVEAELPVEIIDARLMQAREIL
Sbjct: 181 STDCRVLIRGRGSIKDPAREEMMRGKPGYEHLNEPLHILVEAELPVEIIDARLMQAREIL 240

Query: 241 EDLLKPMEESHDFYKKQQLRELAMLNGTLREEGSPMSSSVSPFHNSLGMKRAKTRG 297
           EDLLKPMEESHDFYKKQQLRELAMLNGTLREEGSPMSSSVSPFHNSLGMKRAKTRG
Sbjct: 241 EDLLKPMEESHDFYKKQQLRELAMLNGTLREEGSPMSSSVSPFHNSLGMKRAKTRG 290

[Close]

BLAST of PI0021345 vs. ExPASy TrEMBL
Match: A0A6J1IMS3 (KH domain-containing protein At5g56140-like OS=Cucurbita maxima OX=3661 GN=LOC111476978 PE=4 SV=1)

HSP 1 Score: 541.6 bits (1394), Expect = 2.1e-150
Identity = 282/300 (94.00%), Postives = 290/300 (96.67%), Query Frame = 0


Query: 1   MTSSAAGMYMAFSPSPSAPHSPHLPGLRSPSS----ASAAAILEQEKYLSELLAERQKLS 60
           MTSSA GMYMAFSPSPSAPHSPHLPGLRSPSS    A+AAA+LEQEKYLSELLAERQKL 
Sbjct: 1   MTSSAGGMYMAFSPSPSAPHSPHLPGLRSPSSVSAAAAAAALLEQEKYLSELLAERQKLG 60

Query: 61  PFMPVLPNSYRLLNQEILRVTTLLGKASVLGQSGLEHASPLASGGIFSNGGADMSAWPSR 120
           PF+PVLP SYRLLNQEILRVTTLLGKASVLGQSGLEHASPLASGG+FSNGGADM+ WPSR
Sbjct: 61  PFLPVLPISYRLLNQEILRVTTLLGKASVLGQSGLEHASPLASGGMFSNGGADMNGWPSR 120

Query: 121 FQSEMSGLLQASSAQNWLSSQGSSSGLIVKRTIRVDVPVDNFPNYNFVGRLLGPRGNSLK 180
           FQSEMS LLQ+S AQNWLSSQGSSSGLIVKRTIRVDVPVDN+PNYNFVGRLLGPRGNSLK
Sbjct: 121 FQSEMSSLLQSSPAQNWLSSQGSSSGLIVKRTIRVDVPVDNYPNYNFVGRLLGPRGNSLK 180

Query: 181 RVEASTDCRVLIRGRGSIKDPAREEMMRGKPGYEHLNEPLHILVEAELPVEIIDARLMQA 240
           RVEASTDCRVLIRGRGSIKDPAREEMMRGKPGYEHLNEPLHILVEAELPVEIIDARLMQA
Sbjct: 181 RVEASTDCRVLIRGRGSIKDPAREEMMRGKPGYEHLNEPLHILVEAELPVEIIDARLMQA 240

Query: 241 REILEDLLKPMEESHDFYKKQQLRELAMLNGTLREEGSPMSSSVSPFHNSLGMKRAKTRG 297
           REILEDLLKPM+ESHDFYKKQQLRELAMLNGTLREEGSPMSSSVSPFHNSLGMKRAKTRG
Sbjct: 241 REILEDLLKPMDESHDFYKKQQLRELAMLNGTLREEGSPMSSSVSPFHNSLGMKRAKTRG 300

[Close]

BLAST of PI0021345 vs. NCBI nr
Match: XP_038897899.1 (KH domain-containing protein At5g56140 isoform X1 [Benincasa hispida])

HSP 1 Score: 564.3 bits (1453), Expect = 6.2e-157
Identity = 293/296 (98.99%), Postives = 294/296 (99.32%), Query Frame = 0


Query: 1   MTSSAAGMYMAFSPSPSAPHSPHLPGLRSPSSASAAAILEQEKYLSELLAERQKLSPFMP 60
           MTSSA GMYMAFSPSPSAPHSPHLPGLRSPSSASAAA+LEQEKYLSELLAERQKLSPFMP
Sbjct: 1   MTSSAGGMYMAFSPSPSAPHSPHLPGLRSPSSASAAALLEQEKYLSELLAERQKLSPFMP 60

Query: 61  VLPNSYRLLNQEILRVTTLLGKASVLGQSGLEHASPLASGGIFSNGGADMSAWPSRFQSE 120
           VLPNSYRLLNQEILRVTTLLGKASVLGQSGLEHASPLASGGIFSNGGADMSAWPSRFQSE
Sbjct: 61  VLPNSYRLLNQEILRVTTLLGKASVLGQSGLEHASPLASGGIFSNGGADMSAWPSRFQSE 120

Query: 121 MSGLLQASSAQNWLSSQGSSSGLIVKRTIRVDVPVDNFPNYNFVGRLLGPRGNSLKRVEA 180
           MSGLLQ SSAQNWLSSQGSSSGLIVKRTIRVDVPVDNFPNYNFVGRLLGPRGNSLKRVEA
Sbjct: 121 MSGLLQPSSAQNWLSSQGSSSGLIVKRTIRVDVPVDNFPNYNFVGRLLGPRGNSLKRVEA 180

Query: 181 STDCRVLIRGRGSIKDPAREEMMRGKPGYEHLNEPLHILVEAELPVEIIDARLMQAREIL 240
           STDCRVLIRGRGSIKDPAREEMMRGKPGYEHLNEPLHILVEAELPVEIIDARLMQAREIL
Sbjct: 181 STDCRVLIRGRGSIKDPAREEMMRGKPGYEHLNEPLHILVEAELPVEIIDARLMQAREIL 240

Query: 241 EDLLKPMEESHDFYKKQQLRELAMLNGTLREEGSPMSSSVSPFHNSLGMKRAKTRG 297
           EDLLKPMEESHDFYKKQQLRELAMLNGTLREEGSPMSSSVSPFHNSLGMKRAKTRG
Sbjct: 241 EDLLKPMEESHDFYKKQQLRELAMLNGTLREEGSPMSSSVSPFHNSLGMKRAKTRG 296

[Close]

BLAST of PI0021345 vs. NCBI nr
Match: XP_004139764.1 (KH domain-containing protein At5g56140 [Cucumis sativus])

HSP 1 Score: 563.5 bits (1451), Expect = 1.1e-156
Identity = 293/296 (98.99%), Postives = 295/296 (99.66%), Query Frame = 0


Query: 1   MTSSAAGMYMAFSPSPSAPHSPHLPGLRSPSSASAAAILEQEKYLSELLAERQKLSPFMP 60
           MTSSAAGMYMAFSPSPSAPHSPHLPGLRSPSSASAAAILEQEKYLSELLAERQKLSPFMP
Sbjct: 1   MTSSAAGMYMAFSPSPSAPHSPHLPGLRSPSSASAAAILEQEKYLSELLAERQKLSPFMP 60

Query: 61  VLPNSYRLLNQEILRVTTLLGKASVLGQSGLEHASPLASGGIFSNGGADMSAWPSRFQSE 120
           VLPNSYRLLNQEILRVTTLLGKASVLGQSGLEHASPLASGGIFSNGGADMSAWPSRFQSE
Sbjct: 61  VLPNSYRLLNQEILRVTTLLGKASVLGQSGLEHASPLASGGIFSNGGADMSAWPSRFQSE 120

Query: 121 MSGLLQASSAQNWLSSQGSSSGLIVKRTIRVDVPVDNFPNYNFVGRLLGPRGNSLKRVEA 180
           MSGLLQASSAQNWL+SQGSSSGLIVKRTIRVDVPV+ FPNYNFVGRLLGPRGNSLKRVEA
Sbjct: 121 MSGLLQASSAQNWLTSQGSSSGLIVKRTIRVDVPVETFPNYNFVGRLLGPRGNSLKRVEA 180

Query: 181 STDCRVLIRGRGSIKDPAREEMMRGKPGYEHLNEPLHILVEAELPVEIIDARLMQAREIL 240
           STDCRVLIRGRGSIKDPAREEMMRGKPGYEHLNEPLHILVEAELPVEIIDARLMQAREIL
Sbjct: 181 STDCRVLIRGRGSIKDPAREEMMRGKPGYEHLNEPLHILVEAELPVEIIDARLMQAREIL 240

Query: 241 EDLLKPMEESHDFYKKQQLRELAMLNGTLREEGSPMSSSVSPFHNSLGMKRAKTRG 297
           EDLLKPMEESHDFYKKQQLRELAMLNGTLREEGSPMSSSVSPFHNSLGMKRAKTRG
Sbjct: 241 EDLLKPMEESHDFYKKQQLRELAMLNGTLREEGSPMSSSVSPFHNSLGMKRAKTRG 296

[Close]

BLAST of PI0021345 vs. NCBI nr
Match: XP_008447797.1 (PREDICTED: KH domain-containing protein At5g56140 isoform X2 [Cucumis melo])

HSP 1 Score: 560.5 bits (1443), Expect = 8.9e-156
Identity = 292/296 (98.65%), Postives = 293/296 (98.99%), Query Frame = 0


Query: 1   MTSSAAGMYMAFSPSPSAPHSPHLPGLRSPSSASAAAILEQEKYLSELLAERQKLSPFMP 60
           MTSSAAGMYMAFSPSPSAPHSPHLPGLRSPSSASAAAIL   +YLSELLAERQKLSPFMP
Sbjct: 1   MTSSAAGMYMAFSPSPSAPHSPHLPGLRSPSSASAAAILXXXRYLSELLAERQKLSPFMP 60

Query: 61  VLPNSYRLLNQEILRVTTLLGKASVLGQSGLEHASPLASGGIFSNGGADMSAWPSRFQSE 120
           VLPNSYRLLNQEILRVTTLLGKASVLGQSGLEHASPLASGGIFSNGGADMSAWPSRFQSE
Sbjct: 61  VLPNSYRLLNQEILRVTTLLGKASVLGQSGLEHASPLASGGIFSNGGADMSAWPSRFQSE 120

Query: 121 MSGLLQASSAQNWLSSQGSSSGLIVKRTIRVDVPVDNFPNYNFVGRLLGPRGNSLKRVEA 180
           MSGLLQASSAQNWLSSQGSSSGLIVKRTIRVDVPVDNFPNYNFVGRLLGPRGNSLKRVEA
Sbjct: 121 MSGLLQASSAQNWLSSQGSSSGLIVKRTIRVDVPVDNFPNYNFVGRLLGPRGNSLKRVEA 180

Query: 181 STDCRVLIRGRGSIKDPAREEMMRGKPGYEHLNEPLHILVEAELPVEIIDARLMQAREIL 240
           STDCRVLIRGRGSIKDPAREEMMRGKPGYEHLNEPLHILVEAELPVEIIDARLMQAREIL
Sbjct: 181 STDCRVLIRGRGSIKDPAREEMMRGKPGYEHLNEPLHILVEAELPVEIIDARLMQAREIL 240

Query: 241 EDLLKPMEESHDFYKKQQLRELAMLNGTLREEGSPMSSSVSPFHNSLGMKRAKTRG 297
           EDLLKPMEESHDFYKKQQLRELAMLNGTLREEGSPMSSSVSPFHNSLGMKRAKTRG
Sbjct: 241 EDLLKPMEESHDFYKKQQLRELAMLNGTLREEGSPMSSSVSPFHNSLGMKRAKTRG 296

[Close]

BLAST of PI0021345 vs. NCBI nr
Match: XP_022139476.1 (KH domain-containing protein At5g56140-like isoform X1 [Momordica charantia])

HSP 1 Score: 552.4 bits (1422), Expect = 2.4e-153
Identity = 284/296 (95.95%), Postives = 293/296 (98.99%), Query Frame = 0


Query: 1   MTSSAAGMYMAFSPSPSAPHSPHLPGLRSPSSASAAAILEQEKYLSELLAERQKLSPFMP 60
           MTSSA GMYMAFSPSPSAPHSPHLPGLRSPSSASAAA+LEQEKYLSELLAERQKLSPFMP
Sbjct: 9   MTSSAGGMYMAFSPSPSAPHSPHLPGLRSPSSASAAALLEQEKYLSELLAERQKLSPFMP 68

Query: 61  VLPNSYRLLNQEILRVTTLLGKASVLGQSGLEHASPLASGGIFSNGGADMSAWPSRFQSE 120
           VLPNSYRLL+QEILRVTTLLGKASVLGQSGLEHASPLASGGIFSNGGADM+ WPSRFQSE
Sbjct: 69  VLPNSYRLLSQEILRVTTLLGKASVLGQSGLEHASPLASGGIFSNGGADMNGWPSRFQSE 128

Query: 121 MSGLLQASSAQNWLSSQGSSSGLIVKRTIRVDVPVDNFPNYNFVGRLLGPRGNSLKRVEA 180
           MSGLLQ SSAQNWLSSQGSSSGLIVKRTIRVDVPVDN+PNYNFVGRLLGPRGNSLKRVEA
Sbjct: 129 MSGLLQPSSAQNWLSSQGSSSGLIVKRTIRVDVPVDNYPNYNFVGRLLGPRGNSLKRVEA 188

Query: 181 STDCRVLIRGRGSIKDPAREEMMRGKPGYEHLNEPLHILVEAELPVEIIDARLMQAREIL 240
           STDCRVLIRGRGSIKDPAREEMMRGKPGYEHLNEPLHILVEAELPVEIIDARL+QA+EIL
Sbjct: 189 STDCRVLIRGRGSIKDPAREEMMRGKPGYEHLNEPLHILVEAELPVEIIDARLLQAKEIL 248

Query: 241 EDLLKPMEESHDFYKKQQLRELAMLNGTLREEGSPMSSSVSPFHNSLGMKRAKTRG 297
           +DLLKP++ESHDFYKKQQLRELAMLNGTLREEGSPMSSSVSPFHNSLGMKRAKTRG
Sbjct: 249 QDLLKPIDESHDFYKKQQLRELAMLNGTLREEGSPMSSSVSPFHNSLGMKRAKTRG 304

[Close]

BLAST of PI0021345 vs. NCBI nr
Match: XP_016900476.1 (PREDICTED: KH domain-containing protein At5g56140 isoform X1 [Cucumis melo])

HSP 1 Score: 544.3 bits (1401), Expect = 6.6e-151
Identity = 286/296 (96.62%), Postives = 287/296 (96.96%), Query Frame = 0


Query: 1   MTSSAAGMYMAFSPSPSAPHSPHLPGLRSPSSASAAAILEQEKYLSELLAERQKLSPFMP 60
           MTSSAAGMYMAFSPSPSAPHSPHLPGLRSPSSA         +YLSELLAERQKLSPFMP
Sbjct: 1   MTSSAAGMYMAFSPSPSAPHSPHLPGLRSPSSALFC------RYLSELLAERQKLSPFMP 60

Query: 61  VLPNSYRLLNQEILRVTTLLGKASVLGQSGLEHASPLASGGIFSNGGADMSAWPSRFQSE 120
           VLPNSYRLLNQEILRVTTLLGKASVLGQSGLEHASPLASGGIFSNGGADMSAWPSRFQSE
Sbjct: 61  VLPNSYRLLNQEILRVTTLLGKASVLGQSGLEHASPLASGGIFSNGGADMSAWPSRFQSE 120

Query: 121 MSGLLQASSAQNWLSSQGSSSGLIVKRTIRVDVPVDNFPNYNFVGRLLGPRGNSLKRVEA 180
           MSGLLQASSAQNWLSSQGSSSGLIVKRTIRVDVPVDNFPNYNFVGRLLGPRGNSLKRVEA
Sbjct: 121 MSGLLQASSAQNWLSSQGSSSGLIVKRTIRVDVPVDNFPNYNFVGRLLGPRGNSLKRVEA 180

Query: 181 STDCRVLIRGRGSIKDPAREEMMRGKPGYEHLNEPLHILVEAELPVEIIDARLMQAREIL 240
           STDCRVLIRGRGSIKDPAREEMMRGKPGYEHLNEPLHILVEAELPVEIIDARLMQAREIL
Sbjct: 181 STDCRVLIRGRGSIKDPAREEMMRGKPGYEHLNEPLHILVEAELPVEIIDARLMQAREIL 240

Query: 241 EDLLKPMEESHDFYKKQQLRELAMLNGTLREEGSPMSSSVSPFHNSLGMKRAKTRG 297
           EDLLKPMEESHDFYKKQQLRELAMLNGTLREEGSPMSSSVSPFHNSLGMKRAKTRG
Sbjct: 241 EDLLKPMEESHDFYKKQQLRELAMLNGTLREEGSPMSSSVSPFHNSLGMKRAKTRG 290

[Close]

BLAST of PI0021345 vs. TAIR 10
Match: AT5G56140.1 (RNA-binding KH domain-containing protein )

HSP 1 Score: 419.1 bits (1076), Expect = 3.0e-117
Identity = 225/294 (76.53%), Postives = 251/294 (85.37%), Query Frame = 0


Query: 7   GMYMAFSPS----PSAPHSPHLP-GLRSPSSASAAAILEQEKYLSELLAERQKLSPFMPV 66
           G +M +S S    PSAP SP+   GLRS SS      +EQEKYLSELLAER KL+PF+PV
Sbjct: 27  GRFMTYSSSLSVPPSAPQSPNYSGGLRSQSS----VFVEQEKYLSELLAERHKLTPFLPV 86

Query: 67  LPNSYRLLNQEILRVTTLLGKASVLGQSGLEHASPLASGGIFSNGGADMSAWPSRFQSEM 126
           LP+++RLLNQEILRVTTLL  A+VL QSGL+H SPLASGGIF N  ADM+ W S+F SE 
Sbjct: 87  LPHAFRLLNQEILRVTTLLENATVLSQSGLDHPSPLASGGIFQNARADMNGWASQFPSER 146

Query: 127 SGLLQASSAQNWLSSQGSSSGLIVKRTIRVDVPVDNFPNYNFVGRLLGPRGNSLKRVEAS 186
           S  + +S   NWL+S GSSSGLI KRTIRVD+PVDN+PN+NFVGRLLGPRGNSLKRVEAS
Sbjct: 147 S--VPSSPGPNWLNSPGSSSGLIAKRTIRVDIPVDNYPNFNFVGRLLGPRGNSLKRVEAS 206

Query: 187 TDCRVLIRGRGSIKDPAREEMMRGKPGYEHLNEPLHILVEAELPVEIIDARLMQAREILE 246
           TDCRVLIRGRGSIKDP +EEMMRGKPGYEHLNEPLHILVEAELP+EI+DARLMQAREIL+
Sbjct: 207 TDCRVLIRGRGSIKDPIKEEMMRGKPGYEHLNEPLHILVEAELPIEIVDARLMQAREILD 266

Query: 247 DLLKPMEESHDFYKKQQLRELAMLNGTLREEGSPMSSSVSPFHNSLGMKRAKTR 296
           DLL PMEE+HD YKKQQLRELA+LNGTLREEGSPMS SVSP+ NSLGMKRAKTR
Sbjct: 267 DLLTPMEETHDMYKKQQLRELALLNGTLREEGSPMSGSVSPY-NSLGMKRAKTR 313

[Close]

BLAST of PI0021345 vs. TAIR 10
Match: AT4G26480.1 (RNA-binding KH domain-containing protein )

HSP 1 Score: 403.3 bits (1035), Expect = 1.7e-112
Identity = 219/298 (73.49%), Postives = 248/298 (83.22%), Query Frame = 0


Query: 4   SAAGMYMAFSP----SPSAPHSPHLP-GLRSPSSASAAAILEQEKYLSELLAERQKLSPF 63
           S  G ++ + P     PSAP SP+   GLRS  S     ++EQEKYLSELLAER KL+PF
Sbjct: 20  SGGGRFVTYPPPLSVPPSAPQSPNFSGGLRSQPS----FLVEQEKYLSELLAERHKLTPF 79

Query: 64  MPVLPNSYRLLNQEILRVTTLLGKASVLGQSGLEHASPLASGGIFSNGGADMSAWPSRFQ 123
           +PVLP+  RL+NQEILRVTTLL  A  L QS  +H SPLASGGIF N  ADM+ W S+F 
Sbjct: 80  LPVLPHVCRLMNQEILRVTTLLENA--LSQSRFDHPSPLASGGIFQNSRADMNGWASQFP 139

Query: 124 SEMSGLLQASSAQNWLSSQGSSSGLIVKRTIRVDVPVDNFPNYNFVGRLLGPRGNSLKRV 183
           SE S  + +S A NWL+S GSSSGLIVKRTIRVD+PVD +PNYNFVGRLLGPRGNSLKRV
Sbjct: 140 SERS--VSSSPAPNWLNSPGSSSGLIVKRTIRVDIPVDKYPNYNFVGRLLGPRGNSLKRV 199

Query: 184 EASTDCRVLIRGRGSIKDPAREEMMRGKPGYEHLNEPLHILVEAELPVEIIDARLMQARE 243
           EASTDCRVLIRGRGSIKDP +E+MMRGKPGYEHLNEPLHILVEAELP+EI+DARLMQARE
Sbjct: 200 EASTDCRVLIRGRGSIKDPIKEDMMRGKPGYEHLNEPLHILVEAELPIEIVDARLMQARE 259

Query: 244 ILEDLLKPMEESHDFYKKQQLRELAMLNGTLREEGSPMSSSVSPFHNSLGMKRAKTRG 297
           IL+DLL P+EE+HDFYKKQQLRELA+LNG+LREEGSPMS S+SP+ NSLGMKRAKTRG
Sbjct: 260 ILDDLLTPVEETHDFYKKQQLRELALLNGSLREEGSPMSGSISPY-NSLGMKRAKTRG 308

[Close]

BLAST of PI0021345 vs. TAIR 10
Match: AT3G08620.1 (RNA-binding KH domain-containing protein )

HSP 1 Score: 263.8 bits (673), Expect = 1.6e-70
Identity = 152/289 (52.60%), Postives = 191/289 (66.09%), Query Frame = 0


Query: 9   YMAFSPSPSAPHSPHLPGLRSPSSASAAAILEQEKYLSELLAERQKLSPFMPVLPNSYRL 68
           Y  FSPS +A      P +R+PSS          +Y+S+LLAE QKL PFM VLP   RL
Sbjct: 7   YNNFSPSRAAS-----PQIRTPSSD------VDSQYISQLLAEHQKLGPFMQVLPICSRL 66

Query: 69  LNQEILRVTTLLGKASVLGQSGLEH--ASPLASGGIFSN-GGADMSAWPSRFQSEMSGLL 128
           LNQEI R+T ++          L H   SP+AS  + SN  G  +  W       + G  
Sbjct: 67  LNQEIFRITGMMPNQGFTDFDRLRHRSPSPMASPNLMSNVSGGGLGGWNGLPPERIGG-- 126

Query: 129 QASSAQNWLSSQGSSSGLIVKRTIRVDVPVDNFPNYNFVGRLLGPRGNSLKRVEASTDCR 188
               A  W  +  S S   VKR +R+D+PVD +PN+NFVGRLLGPRGNSLKRVEA+T CR
Sbjct: 127 PHGMAMEWQGAPASPSSYPVKRILRLDLPVDTYPNFNFVGRLLGPRGNSLKRVEATTGCR 186

Query: 189 VLIRGRGSIKDPAREEMMRGKPGYEHLNEPLHILVEAELPVEIIDARLMQAREILEDLLK 248
           V IRG+GSIKDP +EE ++GKPGYEHLNE LHIL+EA+LP++I+D +L QA+EI+E+L+K
Sbjct: 187 VYIRGKGSIKDPEKEEKLKGKPGYEHLNEQLHILIEADLPIDIVDIKLRQAQEIIEELVK 246

Query: 249 PMEESHDFYKKQQLRELAMLNGTLREEGSPMSSSVSPFHNSLGMKRAKT 295
           P++ES D+ K+QQLRELA+LN  LRE     S SVSPF NS  MKR KT
Sbjct: 247 PVDESQDYIKRQQLRELALLNSNLRENSPGPSGSVSPF-NSNAMKRPKT 281

[Close]

BLAST of PI0021345 vs. TAIR 10
Match: AT2G38610.1 (RNA-binding KH domain-containing protein )

HSP 1 Score: 256.1 bits (653), Expect = 3.4e-68
Identity = 146/277 (52.71%), Postives = 189/277 (68.23%), Query Frame = 0


Query: 29  SPSSASAAAI-----LEQEKYLSELLAERQKLSPFMPVLPNSYRLLNQEILRVTTLLGKA 88
           SP+ A++  I     ++  +YL+ELLAE QKL+PFM VLP   RLLNQE+ RV+ ++   
Sbjct: 12  SPARAASPQIRSTPEIDSSQYLTELLAEHQKLTPFMQVLPICSRLLNQEMFRVSGMMSNQ 71

Query: 89  SVLGQSGLEH--ASPLASGGIFSN-GGADMSAWPSRFQSEMSGLLQASSAQNWLSSQGSS 148
                  L H   SP+AS  + SN     +  W    Q  +SG        +W  + GS 
Sbjct: 72  GFGDFDRLRHRSPSPMASSNLMSNVSNTGLGGWNGLSQERLSG--TPGMTMDWQGAPGSP 131

Query: 149 SGLIVKRTIRVDVPVDNFPNYNFVGRLLGPRGNSLKRVEASTDCRVLIRGRGSIKDPARE 208
           S   VKR +R+++PVDN+PN+NFVGRLLGPRGNSLKRVEA+T CRV IRG+GSIKDP +E
Sbjct: 132 SSYTVKRILRLEIPVDNYPNFNFVGRLLGPRGNSLKRVEATTGCRVFIRGKGSIKDPEKE 191

Query: 209 EMMRGKPGYEHLNEPLHILVEAELPVEIIDARLMQAREILEDLLKPMEESHDFYKKQQLR 268
           + +RG+PGYEHLNE LHIL+EA+LP  I++ RL QA+EI+E+LLKP++ES DF K+QQLR
Sbjct: 192 DKLRGRPGYEHLNEQLHILIEADLPASIVEIRLRQAQEIIEELLKPVDESQDFIKRQQLR 251

Query: 269 ELAMLN-GTLREE--GSPMSSSVSPFHNSLGMKRAKT 295
           ELA+LN   LREE  G     SVSPF++S   KR KT
Sbjct: 252 ELALLNSNNLREESPGPSGGGSVSPFNSS--GKRPKT 284

[Close]

BLAST of PI0021345 vs. TAIR 10
Match: AT2G38610.2 (RNA-binding KH domain-containing protein )

HSP 1 Score: 256.1 bits (653), Expect = 3.4e-68
Identity = 146/277 (52.71%), Postives = 189/277 (68.23%), Query Frame = 0


Query: 29  SPSSASAAAI-----LEQEKYLSELLAERQKLSPFMPVLPNSYRLLNQEILRVTTLLGKA 88
           SP+ A++  I     ++  +YL+ELLAE QKL+PFM VLP   RLLNQE+ RV+ ++   
Sbjct: 12  SPARAASPQIRSTPEIDSSQYLTELLAEHQKLTPFMQVLPICSRLLNQEMFRVSGMMSNQ 71

Query: 89  SVLGQSGLEH--ASPLASGGIFSN-GGADMSAWPSRFQSEMSGLLQASSAQNWLSSQGSS 148
                  L H   SP+AS  + SN     +  W    Q  +SG        +W  + GS 
Sbjct: 72  GFGDFDRLRHRSPSPMASSNLMSNVSNTGLGGWNGLSQERLSG--TPGMTMDWQGAPGSP 131

Query: 149 SGLIVKRTIRVDVPVDNFPNYNFVGRLLGPRGNSLKRVEASTDCRVLIRGRGSIKDPARE 208
           S   VKR +R+++PVDN+PN+NFVGRLLGPRGNSLKRVEA+T CRV IRG+GSIKDP +E
Sbjct: 132 SSYTVKRILRLEIPVDNYPNFNFVGRLLGPRGNSLKRVEATTGCRVFIRGKGSIKDPEKE 191

Query: 209 EMMRGKPGYEHLNEPLHILVEAELPVEIIDARLMQAREILEDLLKPMEESHDFYKKQQLR 268
           + +RG+PGYEHLNE LHIL+EA+LP  I++ RL QA+EI+E+LLKP++ES DF K+QQLR
Sbjct: 192 DKLRGRPGYEHLNEQLHILIEADLPASIVEIRLRQAQEIIEELLKPVDESQDFIKRQQLR 251

Query: 269 ELAMLN-GTLREE--GSPMSSSVSPFHNSLGMKRAKT 295
           ELA+LN   LREE  G     SVSPF++S   KR KT
Sbjct: 252 ELALLNSNNLREESPGPSGGGSVSPFNSS--GKRPKT 284

The following BLAST results are available for this feature:

BLAST of PI0021345 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FKT4	4.2e-116	76.53	KH domain-containing protein At5g56140 OS=Arabidopsis thaliana OX=3702 GN=At5g56...	[more]
Q0WLR1	2.4e-111	73.49	KH domain-containing protein At4g26480 OS=Arabidopsis thaliana OX=3702 GN=At4g26...	[more]
Q75GR5	4.6e-70	54.42	KH domain-containing protein SPIN1 OS=Oryza sativa subsp. japonica OX=39947 GN=S...	[more]
Q8GYR4	2.3e-69	52.60	KH domain-containing protein At3g08620 OS=Arabidopsis thaliana OX=3702 GN=At3g08...	[more]
Q9ZVI3	4.7e-67	52.71	KH domain-containing protein At2g38610 OS=Arabidopsis thaliana OX=3702 GN=At2g38...	[more]

BLAST of PI0021345 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K3M6	5.1e-157	98.99	KH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G188690 PE=4 SV=...	[more]
A0A1S3BI94	4.3e-156	98.65	KH domain-containing protein At5g56140 isoform X2 OS=Cucumis melo OX=3656 GN=LOC...	[more]
A0A6J1CCS9	1.2e-153	95.95	KH domain-containing protein At5g56140-like isoform X1 OS=Momordica charantia OX...	[more]
A0A1S4DWW8	3.2e-151	96.62	KH domain-containing protein At5g56140 isoform X1 OS=Cucumis melo OX=3656 GN=LOC...	[more]
A0A6J1IMS3	2.1e-150	94.00	KH domain-containing protein At5g56140-like OS=Cucurbita maxima OX=3661 GN=LOC11...	[more]

BLAST of PI0021345 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038897899.1	6.2e-157	98.99	KH domain-containing protein At5g56140 isoform X1 [Benincasa hispida]	[more]
XP_004139764.1	1.1e-156	98.99	KH domain-containing protein At5g56140 [Cucumis sativus]	[more]
XP_008447797.1	8.9e-156	98.65	PREDICTED: KH domain-containing protein At5g56140 isoform X2 [Cucumis melo]	[more]
XP_022139476.1	2.4e-153	95.95	KH domain-containing protein At5g56140-like isoform X1 [Momordica charantia]	[more]
XP_016900476.1	6.6e-151	96.62	PREDICTED: KH domain-containing protein At5g56140 isoform X1 [Cucumis melo]	[more]

BLAST of PI0021345 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G56140.1	3.0e-117	76.53	RNA-binding KH domain-containing protein	[more]
AT4G26480.1	1.7e-112	73.49	RNA-binding KH domain-containing protein	[more]
AT3G08620.1	1.6e-70	52.60	RNA-binding KH domain-containing protein	[more]
AT2G38610.1	3.4e-68	52.71	RNA-binding KH domain-containing protein	[more]
AT2G38610.2	3.4e-68	52.71	RNA-binding KH domain-containing protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004087	K Homology domain	SMART	SM00322	kh_6	coord: 145..238 e-value: 6.7E-6 score: 35.6
IPR036612	K Homology domain, type 1 superfamily	GENE3D	3.30.1370.10	K Homology domain, type 1	coord: 37..276 e-value: 1.1E-67 score: 230.0
IPR036612	K Homology domain, type 1 superfamily	SUPERFAMILY	54791	Eukaryotic type KH-domain (KH-domain type I)	coord: 150..270
IPR032377	STAR protein, homodimerisation region	PFAM	PF16544	STAR_dimer	coord: 43..77 e-value: 2.7E-7 score: 30.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 271..296
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 271..285
None	No IPR available	PANTHER	PTHR11208:SF104	STAR PROTEIN, HOMODIMERIZATION REGION-RELATED	coord: 6..296
None	No IPR available	CDD	cd02395	SF1_like-KH	coord: 148..270 e-value: 2.35955E-56 score: 175.895
IPR045071	KH domain-containing BBP-like	PANTHER	PTHR11208	RNA-BINDING PROTEIN RELATED	coord: 6..296

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0021345.1	PI0021345.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0048024	regulation of mRNA splicing, via spliceosome
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003729	mRNA binding
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0003723	RNA binding