PI0021311 (gene) Melon (PI 482460) v1

Overview
NamePI0021311
Typegene
OrganismCucumis metuliferus (Melon (PI 482460) v1)
DescriptionUnknown protein
Locationchr05: 6306474 .. 6306760 (+)
RNA-Seq ExpressionPI0021311
SyntenyPI0021311
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATGATGTTGGTGGCTCAGCTTTTGAAGCTCTCTATCTCTCTAACCCAACATGGATTCCCTTTGCTAGACCAAAACCCATCACTTGTCTCAAGAGATAGTACTAGATTCTATGTTTCACAAACTTTTCTCTCTCTTAATTTCCAATAATATTATGAGTGAGAGAGAGAGAAAATATATATTATCCTTTTGGGTAATTTAGGGCTTTCTTTTGAACTGCCCCACTCCCACTCTTATCATCATCATTGCAAAACCTCACCTTGTGGGGAACAGGGAATTTCCCTAA

mRNA sequence

ATGGATGATGTTGGTGGCTCAGCTTTTGAAGCTCTCTATCTCTCTAACCCAACATGGATTCCCTTTGGCTTTCTTTTGAACTGCCCCACTCCCACTCTTATCATCATCATTGCAAAACCTCACCTTGTGGGGAACAGGGAATTTCCCTAA

Coding sequence (CDS)

ATGGATGATGTTGGTGGCTCAGCTTTTGAAGCTCTCTATCTCTCTAACCCAACATGGATTCCCTTTGGCTTTCTTTTGAACTGCCCCACTCCCACTCTTATCATCATCATTGCAAAACCTCACCTTGTGGGGAACAGGGAATTTCCCTAA

Protein sequence

MDDVGGSAFEALYLSNPTWIPFGFLLNCPTPTLIIIIAKPHLVGNREFP
Homology
[Close]
BLAST of PI0021311 vs. ExPASy TrEMBL
Match: A0A0A0LGW0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G062610 PE=4 SV=1)

HSP 1 Score: 89.4 bits (220), Expect = 4.7e-15
Identity = 44/61 (72.13%), Postives = 45/61 (73.77%), Query Frame = 0 

Query: 1  MDDVGGSAFEALYLSNPTWIPF------------GFLLNCPTPTLIIIIAKPHLVGNREF 50
          MDDVGGSAFEALYLSNPTWIPF            GFLLNCPTPTLIIIIAKPHL+    F
Sbjct: 1  MDDVGGSAFEALYLSNPTWIPFARPKPHHLSQEIGFLLNCPTPTLIIIIAKPHLLVTGNF 60

[Close]
BLAST of PI0021311 vs. NCBI nr
Match: KGN61185.1 (hypothetical protein Csa_021332 [Cucumis sativus])

HSP 1 Score: 89.4 bits (220), Expect = 9.6e-15
Identity = 44/61 (72.13%), Postives = 45/61 (73.77%), Query Frame = 0 

Query: 1  MDDVGGSAFEALYLSNPTWIPF------------GFLLNCPTPTLIIIIAKPHLVGNREF 50
          MDDVGGSAFEALYLSNPTWIPF            GFLLNCPTPTLIIIIAKPHL+    F
Sbjct: 1  MDDVGGSAFEALYLSNPTWIPFARPKPHHLSQEIGFLLNCPTPTLIIIIAKPHLLVTGNF 60

The following BLAST results are available for this feature:
BLAST of PI0021311 vs.
Match NameE-valueIdentityDescription
BLAST of PI0021311 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LGW04.7e-1572.13Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G062610 PE=4 SV=1[more]
BLAST of PI0021311 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN61185.19.6e-1572.13hypothetical protein Csa_021332 [Cucumis sativus][more]
BLAST of PI0021311 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
PI0021311.1PI0021311.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016020 membrane