PI0021240 (gene) Melon (PI 482460) v1

Overview


Name	PI0021240
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	Transcription factor IBH1
Location	chr05: 4775242 .. 4776226 (+)
RNA-Seq Expression	PI0021240
Synteny	PI0021240

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTTGATTTGGGTTTTGGTGGGCCTTATCCTCCATGTGCTTCCATGTGCTGTGTCTTTCTTTCATAACCCCACCATCCTTTCTTCTCTAACACACACATAAAATCCCATTTCTCCAAAACTCTTCAATCTCTCATTCATTTTCCTCTCTTTTCTTTCTCTCATTCTTTCTCATTGCAACCCTAATTCTTTTCTAAAACCCTAAATTCTTCTTAAAATTTCATTTTTTTCCTCTACTATTTTTCTTTTGATCTTCAAGACATGCCCAACCCCAACAAGCTCAAACAACAATTTCTCAAGAAATGGTTGGTAGGTCAACAATCAACCACTTCTTCAAACACAAACATGAATTTCCTAGACAGAAAGAAAGCCATAAAGATCTCGGCCGACTACGCCATGGCTGCAACGAGGAACGGCACGACTATTTGGAGTCGAGCCATCATTGCCAAATCCCTTAAAGGTCATGCTCCACCCAAGGCCATATTGAATCGTCGAACGATTTACACAAATCTTCTAAGGAAGAAGATGACGATGACACAACTGCGAAAGATGGGTCGGAAAGTGGGTCAGAAAGTCGGTCGAAAAACAGTGAGGAGGAGTCGCTTGCCTTCGTCAAGGGCGTTACCGAGCACGATTGCAAAGAGATTGGTTGAGAAAAGAACTAAAGTTTTGAGGAGTTTGATTCCGGGAGGAGAGTTTATGGAGGATGAAGTTTTGTTGATTGAAGAAGCCCTAGATTATATACCGTTTCTTCAAGCTCAGGTTGATGGAATGCGATTTCTTGCTAATTATTGCAAATGAGAATTCAAAATTCATAATTTACGTACTTAATTACTTTTGTAATATCTTTTATTTTTTTTTAAAAAAAAGGGCTTGTTAGGGAGAAATATATATTCACTAATGCAATATTGTACAGCTGAAAAATATATGTTTATATATATATATATATATATATACATACATGTAAGTGAATTTGATATTTTAATTT

mRNA sequence

GTTGATTTGGGTTTTGGTGGGCCTTATCCTCCATGTGCTTCCATGTGCTGTGTCTTTCTTTCATAACCCCACCATCCTTTCTTCTCTAACACACACATAAAATCCCATTTCTCCAAAACTCTTCAATCTCTCATTCATTTTCCTCTCTTTTCTTTCTCTCATTCTTTCTCATTGCAACCCTAATTCTTTTCTAAAACCCTAAATTCTTCTTAAAATTTCATTTTTTTCCTCTACTATTTTTCTTTTGATCTTCAAGACATGCCCAACCCCAACAAGCTCAAACAACAATTTCTCAAGAAATGGTTGGTAGGTCAACAATCAACCACTTCTTCAAACACAAACATGAATTTCCTAGACAGAAAGAAAGCCATAAAGATCTCGGCCGACTACGCCATGGCTGCAACGAGGAACGGCACGACTATTTGGAGTCGAGCCATCATTGCCAAATCCCTTAAAGGTCATGCTCCACCCAAGGCCATATTGAATCGTCGAACGATTTACACAAATCTTCTAAGGAAGAAGATGACGATGACACAACTGCGAAAGATGGGTCGGAAAGTGGGTCAGAAAGTCGGTCGAAAAACAGTGAGGAGGAGTCGCTTGCCTTCGTCAAGGGCGTTACCGAGCACGATTGCAAAGAGATTGGTTGAGAAAAGAACTAAAGTTTTGAGGAGTTTGATTCCGGGAGGAGAGTTTATGGAGGATGAAGTTTTGTTGATTGAAGAAGCCCTAGATTATATACCGTTTCTTCAAGCTCAGGTTGATGGAATGCGATTTCTTGCTAATTATTGCAAATGAGAATTCAAAATTCATAATTTACGTACTTAATTACTTTTGTAATATCTTTTATTTTTTTTTAAAAAAAAGGGCTTGTTAGGGAGAAATATATATTCACTAATGCAATATTGTACAGCTGAAAAATATATGTTTATATATATATATATATATATATACATACATGTAAGTGAATTTGATATTTTAATTT

Coding sequence (CDS)

ATGCCCAACCCCAACAAGCTCAAACAACAATTTCTCAAGAAATGGTTGGTAGGTCAACAATCAACCACTTCTTCAAACACAAACATGAATTTCCTAGACAGAAAGAAAGCCATAAAGATCTCGGCCGACTACGCCATGGCTGCAACGAGGAACGGCACGACTATTTGGAGTCGAGCCATCATTGCCAAATCCCTTAAAGGTCATGCTCCACCCAAGGCCATATTGAATCGTCGAACGATTTACACAAATCTTCTAAGGAAGAAGATGACGATGACACAACTGCGAAAGATGGGTCGGAAAGTGGGTCAGAAAGTCGGTCGAAAAACAGTGAGGAGGAGTCGCTTGCCTTCGTCAAGGGCGTTACCGAGCACGATTGCAAAGAGATTGGTTGAGAAAAGAACTAAAGTTTTGAGGAGTTTGATTCCGGGAGGAGAGTTTATGGAGGATGAAGTTTTGTTGATTGAAGAAGCCCTAGATTATATACCGTTTCTTCAAGCTCAGGTTGATGGAATGCGATTTCTTGCTAATTATTGCAAATGA

Protein sequence

MPNPNKLKQQFLKKWLVGQQSTTSSNTNMNFLDRKKAIKISADYAMAATRNGTTIWSRAIIAKSLKGHAPPKAILNRRTIYTNLLRKKMTMTQLRKMGRKVGQKVGRKTVRRSRLPSSRALPSTIAKRLVEKRTKVLRSLIPGGEFMEDEVLLIEEALDYIPFLQAQVDGMRFLANYCK

Homology

[Close]

BLAST of PI0021240 vs. ExPASy Swiss-Prot
Match: Q9M0B9 (Transcription factor IBH1-like 1 OS=Arabidopsis thaliana OX=3702 GN=IBL1 PE=1 SV=1)

HSP 1 Score: 105.1 bits (261), Expect = 8.1e-22
Identity = 72/180 (40.00%), Postives = 108/180 (60.00%), Query Frame = 0


Query: 1   MPNPNKLKQQFLKKWLVGQQSTTSSNTNMNFLDRKKAIKISADYAMAATRNGTTIWSRAI 60
           M   + + ++FLKKW +G Q    S  N +  +RKKAIK+SAD AMA+ R GTT WSRA+
Sbjct: 1   MQPTSSMNEEFLKKWQMGLQIFRPSIDNTSVHERKKAIKLSADVAMASLRKGTTCWSRAL 60

Query: 61  IAKSLKGHAPPKAILNRRTI----YTNLLRKKMTMTQLRKMGRKVGQKVGRKTVRRSRLP 120
           I K+    A     L R+ +       L+ KK+    +    RK+ ++  +   R+S+  
Sbjct: 61  IEKT----ATEDNFLVRQMLSGIKAETLINKKLPKKTV--CHRKIVRRSKKILRRKSKSA 120

Query: 121 SSRALPSTIAKRLVEKRTKVLRSLIPGGEFMEDEVLLIEEALDYIPFLQAQVDGMRFLAN 177
           S  A  +  AKRLV++RT+ LR+++PGGE M ++VLL++E LDYI  LQ QV+ MR + +
Sbjct: 121 SEEA--AAKAKRLVKRRTQGLRNVVPGGELMSNDVLLLQETLDYIVSLQTQVNVMRSIVD 172

[Close]

BLAST of PI0021240 vs. ExPASy Swiss-Prot
Match: Q9LSN7 (Transcription factor bHLH147 OS=Arabidopsis thaliana OX=3702 GN=BHLH147 PE=1 SV=1)

HSP 1 Score: 46.6 bits (109), Expect = 3.4e-04
Identity = 48/160 (30.00%), Postives = 82/160 (51.25%), Query Frame = 0


Query: 12  LKKWLVGQQSTTSSNTNMNFLDRKKAIKISADYAMAATRNGTTIWSRAIIAKSLKGHAPP 71
           L++  + QQ ++SS++++    R  A++  AD A+A    G T+WSRAI++K++K     
Sbjct: 67  LRELRISQQPSSSSSSSIPRGGR--AVREVADRALAVAARGKTLWSRAILSKAVK----L 126

Query: 72  KAILNRRTIYTNLLRKKMTMTQLRKMGRKVGQKVGRKTVRRSRLPSSRALPSTIAKRLVE 131
           K   ++R   +N     +T   +R        K  R TV R +   ++ LP+      V+
Sbjct: 127 KFRKHKRQRISNPTTTTLTTGSIR-------SKKQRATVLRLK---AKGLPA------VQ 186

Query: 132 KRTKVLRSLIPGGEFMEDEVLLIEEALDYIPFLQAQVDGM 172
           ++ KVL  L+PG       V+L EE  DYI  ++ Q+  M
Sbjct: 187 RKVKVLSRLVPGCRKQSLPVVL-EETTDYIAAMEMQIRTM 203

[Close]

BLAST of PI0021240 vs. ExPASy Swiss-Prot
Match: O80482 (Transcription factor bHLH149 OS=Arabidopsis thaliana OX=3702 GN=BHLH149 PE=1 SV=1)

HSP 1 Score: 46.6 bits (109), Expect = 3.4e-04
Identity = 50/164 (30.49%), Postives = 73/164 (44.51%), Query Frame = 0


Query: 17  VGQQSTTSSNTNMNFL--DRKKAIKISADYAMAATRNGTTIWSRAIIAKSLKGHAPPKAI 76
           V Q+S+T+SN   + L     + I+ +AD  +AA+  GTT WSRAI+A            
Sbjct: 64  VRQRSSTTSNNETDKLVSGAAREIRDTADRVLAASARGTTRWSRAILAS----------- 123

Query: 77  LNRRTIYTNLLRKKMTMTQLRKMGRKVGQKVGRK---TVRRSRLPSSRALPSTIAKRLVE 136
                      R +  + + RK  +  G    RK      R +LP+            VE
Sbjct: 124 -----------RVRAKLKKHRKAKKSTGNCKSRKGLTETNRIKLPA------------VE 183

Query: 137 KRTKVLRSLIPGGEFMEDEVLLIEEALDYIPFLQAQVDGMRFLA 176
           ++ K+L  L+PG   +    LL +EA DYI  L+ QV  M  LA
Sbjct: 184 RKLKILGRLVPGCRKVSVPNLL-DEATDYIAALEMQVRAMEALA 192

[Close]

BLAST of PI0021240 vs. ExPASy Swiss-Prot
Match: Q9C8Z9 (Transcription factor bHLH148 OS=Arabidopsis thaliana OX=3702 GN=BHLH148 PE=1 SV=1)

HSP 1 Score: 46.2 bits (108), Expect = 4.5e-04
Identity = 50/169 (29.59%), Postives = 73/169 (43.20%), Query Frame = 0


Query: 6   KLKQQFLKKWLVGQQSTTSSNTNMNFLDRKKAIKISADYAMAATRNGTTIWSRAIIAKSL 65
           KL Q   +  L    ST+SS T      R KA++ +AD A+A +  G T+WSRAI+A  +
Sbjct: 60  KLFQALQQVRLNSSASTSSSPTAQK---RGKAVREAADRALAVSARGRTLWSRAILANRI 119

Query: 66  KGHAPPKAILNRRTIYTNLLRKKMTMTQLRKMGRKVGQKVGRKTVRRSRLPSSRALPSTI 125
           K          +R     +    MT        R   ++V    + +  +P         
Sbjct: 120 K-----LKFRKQRRPRATMAIPAMTTVVSSSSNRSRKRRVSVLRLNKKSIPD-------- 179

Query: 126 AKRLVEKRTKVLRSLIPGGEFMEDEVLLIEEALDYIPFLQAQVDGMRFL 175
               V ++ +VL  L+PG       V+L EEA DYI  L+ QV  M  L
Sbjct: 180 ----VNRKVRVLGRLVPGCGKQSVPVIL-EEATDYIQALEMQVRAMNSL 207

[Close]

BLAST of PI0021240 vs. ExPASy TrEMBL
Match: A0A5D3CK75 (Transcription factor IBH1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold231G00030 PE=4 SV=1)

HSP 1 Score: 302.4 bits (773), Expect = 1.3e-78
Identity = 159/179 (88.83%), Postives = 165/179 (92.18%), Query Frame = 0


Query: 1   MPNPNKLKQQFLKKWLVGQQSTTSSNTNMNFLDRKKAIKISADYAMAATRNGTTIWSRAI 60
           MPNPNKLKQQFLK WLVG QSTTSS TNMNFLDRKKAIKISADYAMAATRNGTTIWS++I
Sbjct: 1   MPNPNKLKQQFLKNWLVGLQSTTSSTTNMNFLDRKKAIKISADYAMAATRNGTTIWSQSI 60

Query: 61  IAKSLKGHAPPKAILNRRTIYTNLLRKKMTMTQLRKMGRKVGQKVGRKTVRRSRLPSSRA 120
           IAKSLKGHAPP+AILNRRT Y NLLRKK TMTQLRKMGR    K+GRK  RRSRLP S+A
Sbjct: 61  IAKSLKGHAPPEAILNRRTSYINLLRKKRTMTQLRKMGR----KIGRKMARRSRLPLSKA 120

Query: 121 LPSTIAKRLVEKRTKVLRSLIPGGEFMEDEVLLIEEALDYIPFLQAQVDGMRFLANYCK 180
           LPSTIAKRLVEKRTKVLRSLIPGGEFM+DE LLIEEALDYIPFLQAQVDGMRFLANYCK
Sbjct: 121 LPSTIAKRLVEKRTKVLRSLIPGGEFMKDEALLIEEALDYIPFLQAQVDGMRFLANYCK 175

[Close]

BLAST of PI0021240 vs. ExPASy TrEMBL
Match: A0A1S3BT01 (uncharacterized protein LOC103493395 OS=Cucumis melo OX=3656 GN=LOC103493395 PE=4 SV=1)

HSP 1 Score: 296.2 bits (757), Expect = 9.2e-77
Identity = 157/179 (87.71%), Postives = 163/179 (91.06%), Query Frame = 0


Query: 1   MPNPNKLKQQFLKKWLVGQQSTTSSNTNMNFLDRKKAIKISADYAMAATRNGTTIWSRAI 60
           MPN NKLKQQFLK WLVG QSTTSS TNMNFLDRKKAIKISADYAMAATRNGTTIWS++I
Sbjct: 1   MPNLNKLKQQFLKNWLVGLQSTTSSTTNMNFLDRKKAIKISADYAMAATRNGTTIWSQSI 60

Query: 61  IAKSLKGHAPPKAILNRRTIYTNLLRKKMTMTQLRKMGRKVGQKVGRKTVRRSRLPSSRA 120
           IAK LKGHAPP+AILNRRT Y NLLRKK TMTQLRKMGR    K+GRK  RRSRLP S+A
Sbjct: 61  IAKYLKGHAPPEAILNRRTSYINLLRKKRTMTQLRKMGR----KIGRKMARRSRLPLSKA 120

Query: 121 LPSTIAKRLVEKRTKVLRSLIPGGEFMEDEVLLIEEALDYIPFLQAQVDGMRFLANYCK 180
           LPSTIAKRLVEKRTKVLRSLIPGGEFM+DE LLIEEALDYIPFLQAQVDGMRFLANYCK
Sbjct: 121 LPSTIAKRLVEKRTKVLRSLIPGGEFMKDEALLIEEALDYIPFLQAQVDGMRFLANYCK 175

[Close]

BLAST of PI0021240 vs. ExPASy TrEMBL
Match: A0A0A0LM92 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G047790 PE=4 SV=1)

HSP 1 Score: 290.0 bits (741), Expect = 6.6e-75
Identity = 157/181 (86.74%), Postives = 165/181 (91.16%), Query Frame = 0


Query: 1   MPNPNKLKQQFLKKWLVGQQSTTSSN-TNMNFLDRKKAIKISADYAMAATRNGTTIWSRA 60
           MPNPNKLKQQFLKKWLVG +STTSS+ TNMNFLDRKKAIKISADYAMA TR GTTIWS++
Sbjct: 1   MPNPNKLKQQFLKKWLVGLRSTTSSSTTNMNFLDRKKAIKISADYAMAETRKGTTIWSQS 60

Query: 61  IIAKSLKGHAPPKAILNRRTIYTNLLRKKMTMTQLRKMGRKVGQKVGRKTVRRSRLPSSR 120
           IIAKSLKGHAPPKAILNR TIY NLLRKK TMTQL+KMGR    K+GR+  RRSRLPSS+
Sbjct: 61  IIAKSLKGHAPPKAILNRGTIYINLLRKKRTMTQLQKMGR----KIGRRMARRSRLPSSK 120

Query: 121 ALPSTIAKRLVEKRTKVLRSLIPGGEFMEDEVLLIEEALDYIPFLQAQVDGMRFLAN-YC 180
            LP TIAKRLVEKRTKVLRSLIPGGEFMEDEVLLIEEALDYIPFLQAQVDGMRFLAN YC
Sbjct: 121 VLPRTIAKRLVEKRTKVLRSLIPGGEFMEDEVLLIEEALDYIPFLQAQVDGMRFLANYYC 177

[Close]

BLAST of PI0021240 vs. ExPASy TrEMBL
Match: A0A6J1DKD7 (transcription factor IBH1-like 1 OS=Momordica charantia OX=3673 GN=LOC111020866 PE=4 SV=1)

HSP 1 Score: 195.3 bits (495), Expect = 2.2e-46
Identity = 114/183 (62.30%), Postives = 137/183 (74.86%), Query Frame = 0


Query: 1   MPNPNKLKQQFLKKWLVGQQSTTSSNTNMNFLDRKKAIKISADYAMAATRNGTTIWSRAI 60
           MPNPNKLKQ+FL+KW V  ++ T+SNT M+  +RKKAIK+SAD AMA+ RNGTTIWSRAI
Sbjct: 1   MPNPNKLKQRFLEKWRVDLKTYTASNTTMDVSERKKAIKMSADLAMASARNGTTIWSRAI 60

Query: 61  IAKSLKGHAPPKAILN---RRTIYTNLLRKKMTMTQLRKMGRKVGQKVGRKTVRRSR-LP 120
           IAKS+K   P + +L+        + L RKK TM Q +  GR+   +VGR+  RRS   P
Sbjct: 61  IAKSMKDRVPAEIVLSHPVHGVKLSKLGRKKTTMVQTK--GRR---RVGRRATRRSNFFP 120

Query: 121 SSRALPSTIAKRLVEKRTKVLRSLIPGGEFMEDEVLLIEEALDYIPFLQAQVDGMRFLAN 180
            S+A    +AKRLVEKR KVLRSL+PGGEFMEDEVLLIEE LDYI FL+AQVDGMRFLA+
Sbjct: 121 PSKAFARLVAKRLVEKRRKVLRSLVPGGEFMEDEVLLIEETLDYISFLRAQVDGMRFLAS 177

[Close]

BLAST of PI0021240 vs. ExPASy TrEMBL
Match: A0A6J1FC37 (transcription factor IBH1-like 1 OS=Cucurbita moschata OX=3662 GN=LOC111444263 PE=4 SV=1)

HSP 1 Score: 182.6 bits (462), Expect = 1.5e-42
Identity = 105/179 (58.66%), Postives = 129/179 (72.07%), Query Frame = 0


Query: 1   MPNPNKLKQQFLKKWLVGQQSTTSSNTNMNFLDRKKAIKISADYAMAATRNGTTIWSRAI 60
           MPNP  LKQ F+KKW++G    T SNTNMNFL+RK AIK ++D AMAATRNG T WSRAI
Sbjct: 1   MPNPINLKQIFIKKWIMGLNPITFSNTNMNFLERKNAIKAASDLAMAATRNGATHWSRAI 60

Query: 61  IAKSLKGHAPPKAILNRRTIYTNLLRKKMTMTQLRKMGRKVGQKVGRKTVRRSRLPSSRA 120
           IAKS++  APP+A L R+T+             LRK+ RKV +        R+ L  SR+
Sbjct: 61  IAKSIQ--APPEAKLRRKTM-------------LRKIARKVARS-------RTHLSRSRS 120

Query: 121 LPSTIAKRLVEKRTKVLRSLIPGGEFMEDEVLLIEEALDYIPFLQAQVDGMRFLANYCK 180
           +  ++AKRLV KRTK+LRSL+PGGEFM+DE LLI+EALDYI FL+ QVDGMRFLA+ CK
Sbjct: 121 VARSVAKRLVHKRTKLLRSLVPGGEFMKDEALLIDEALDYISFLRVQVDGMRFLAD-CK 156

[Close]

BLAST of PI0021240 vs. NCBI nr
Match: KAA0048635.1 (transcription factor IBH1 [Cucumis melo var. makuwa] >TYK10836.1 transcription factor IBH1 [Cucumis melo var. makuwa])

HSP 1 Score: 302.4 bits (773), Expect = 2.6e-78
Identity = 159/179 (88.83%), Postives = 165/179 (92.18%), Query Frame = 0


Query: 1   MPNPNKLKQQFLKKWLVGQQSTTSSNTNMNFLDRKKAIKISADYAMAATRNGTTIWSRAI 60
           MPNPNKLKQQFLK WLVG QSTTSS TNMNFLDRKKAIKISADYAMAATRNGTTIWS++I
Sbjct: 1   MPNPNKLKQQFLKNWLVGLQSTTSSTTNMNFLDRKKAIKISADYAMAATRNGTTIWSQSI 60

Query: 61  IAKSLKGHAPPKAILNRRTIYTNLLRKKMTMTQLRKMGRKVGQKVGRKTVRRSRLPSSRA 120
           IAKSLKGHAPP+AILNRRT Y NLLRKK TMTQLRKMGR    K+GRK  RRSRLP S+A
Sbjct: 61  IAKSLKGHAPPEAILNRRTSYINLLRKKRTMTQLRKMGR----KIGRKMARRSRLPLSKA 120

Query: 121 LPSTIAKRLVEKRTKVLRSLIPGGEFMEDEVLLIEEALDYIPFLQAQVDGMRFLANYCK 180
           LPSTIAKRLVEKRTKVLRSLIPGGEFM+DE LLIEEALDYIPFLQAQVDGMRFLANYCK
Sbjct: 121 LPSTIAKRLVEKRTKVLRSLIPGGEFMKDEALLIEEALDYIPFLQAQVDGMRFLANYCK 175

[Close]

BLAST of PI0021240 vs. NCBI nr
Match: XP_008452339.1 (PREDICTED: uncharacterized protein LOC103493395 [Cucumis melo])

HSP 1 Score: 296.2 bits (757), Expect = 1.9e-76
Identity = 157/179 (87.71%), Postives = 163/179 (91.06%), Query Frame = 0


Query: 1   MPNPNKLKQQFLKKWLVGQQSTTSSNTNMNFLDRKKAIKISADYAMAATRNGTTIWSRAI 60
           MPN NKLKQQFLK WLVG QSTTSS TNMNFLDRKKAIKISADYAMAATRNGTTIWS++I
Sbjct: 1   MPNLNKLKQQFLKNWLVGLQSTTSSTTNMNFLDRKKAIKISADYAMAATRNGTTIWSQSI 60

Query: 61  IAKSLKGHAPPKAILNRRTIYTNLLRKKMTMTQLRKMGRKVGQKVGRKTVRRSRLPSSRA 120
           IAK LKGHAPP+AILNRRT Y NLLRKK TMTQLRKMGR    K+GRK  RRSRLP S+A
Sbjct: 61  IAKYLKGHAPPEAILNRRTSYINLLRKKRTMTQLRKMGR----KIGRKMARRSRLPLSKA 120

Query: 121 LPSTIAKRLVEKRTKVLRSLIPGGEFMEDEVLLIEEALDYIPFLQAQVDGMRFLANYCK 180
           LPSTIAKRLVEKRTKVLRSLIPGGEFM+DE LLIEEALDYIPFLQAQVDGMRFLANYCK
Sbjct: 121 LPSTIAKRLVEKRTKVLRSLIPGGEFMKDEALLIEEALDYIPFLQAQVDGMRFLANYCK 175

[Close]

BLAST of PI0021240 vs. NCBI nr
Match: XP_004149100.1 (transcription factor IBH1-like 1 [Cucumis sativus] >KGN61086.1 hypothetical protein Csa_021346 [Cucumis sativus])

HSP 1 Score: 290.0 bits (741), Expect = 1.4e-74
Identity = 157/181 (86.74%), Postives = 165/181 (91.16%), Query Frame = 0


Query: 1   MPNPNKLKQQFLKKWLVGQQSTTSSN-TNMNFLDRKKAIKISADYAMAATRNGTTIWSRA 60
           MPNPNKLKQQFLKKWLVG +STTSS+ TNMNFLDRKKAIKISADYAMA TR GTTIWS++
Sbjct: 1   MPNPNKLKQQFLKKWLVGLRSTTSSSTTNMNFLDRKKAIKISADYAMAETRKGTTIWSQS 60

Query: 61  IIAKSLKGHAPPKAILNRRTIYTNLLRKKMTMTQLRKMGRKVGQKVGRKTVRRSRLPSSR 120
           IIAKSLKGHAPPKAILNR TIY NLLRKK TMTQL+KMGR    K+GR+  RRSRLPSS+
Sbjct: 61  IIAKSLKGHAPPKAILNRGTIYINLLRKKRTMTQLQKMGR----KIGRRMARRSRLPSSK 120

Query: 121 ALPSTIAKRLVEKRTKVLRSLIPGGEFMEDEVLLIEEALDYIPFLQAQVDGMRFLAN-YC 180
            LP TIAKRLVEKRTKVLRSLIPGGEFMEDEVLLIEEALDYIPFLQAQVDGMRFLAN YC
Sbjct: 121 VLPRTIAKRLVEKRTKVLRSLIPGGEFMEDEVLLIEEALDYIPFLQAQVDGMRFLANYYC 177

[Close]

BLAST of PI0021240 vs. NCBI nr
Match: XP_038890559.1 (transcription factor IBH1-like 1 [Benincasa hispida])

HSP 1 Score: 270.0 bits (689), Expect = 1.5e-68
Identity = 144/179 (80.45%), Postives = 156/179 (87.15%), Query Frame = 0


Query: 1   MPNPNKLKQQFLKKWLVGQQSTTSSNTNMNFLDRKKAIKISADYAMAATRNGTTIWSRAI 60
           MPNPNKLKQQFLKKWLVG +STTSSNTNMN L+RKKAIK+SADYAMAATRNG+TIWSRAI
Sbjct: 1   MPNPNKLKQQFLKKWLVGLKSTTSSNTNMNILERKKAIKMSADYAMAATRNGSTIWSRAI 60

Query: 61  IAKSLKGHAPPKAILNRRTIYTNLLRKKMTMTQLRKMGRKVGQKVGRKTVRRSRLPSSRA 120
           IAKS+KG AP +AI NR+TIY  L RKKMT T L KMGR+VG+KV      RSR P  +A
Sbjct: 61  IAKSIKGQAPLEAISNRQTIYAKLQRKKMTTTTLWKMGRRVGRKVA-----RSRSPPWKA 120

Query: 121 LPSTIAKRLVEKRTKVLRSLIPGGEFMEDEVLLIEEALDYIPFLQAQVDGMRFLANYCK 180
           L  T+AKRLVEKRTKVLRSL+PGGEFMEDEVLLIEEALDYI FLQAQVDGMRFLANYCK
Sbjct: 121 LARTVAKRLVEKRTKVLRSLVPGGEFMEDEVLLIEEALDYITFLQAQVDGMRFLANYCK 174

[Close]

BLAST of PI0021240 vs. NCBI nr
Match: XP_022153351.1 (transcription factor IBH1-like 1 [Momordica charantia])

HSP 1 Score: 195.3 bits (495), Expect = 4.6e-46
Identity = 114/183 (62.30%), Postives = 137/183 (74.86%), Query Frame = 0


Query: 1   MPNPNKLKQQFLKKWLVGQQSTTSSNTNMNFLDRKKAIKISADYAMAATRNGTTIWSRAI 60
           MPNPNKLKQ+FL+KW V  ++ T+SNT M+  +RKKAIK+SAD AMA+ RNGTTIWSRAI
Sbjct: 1   MPNPNKLKQRFLEKWRVDLKTYTASNTTMDVSERKKAIKMSADLAMASARNGTTIWSRAI 60

Query: 61  IAKSLKGHAPPKAILN---RRTIYTNLLRKKMTMTQLRKMGRKVGQKVGRKTVRRSR-LP 120
           IAKS+K   P + +L+        + L RKK TM Q +  GR+   +VGR+  RRS   P
Sbjct: 61  IAKSMKDRVPAEIVLSHPVHGVKLSKLGRKKTTMVQTK--GRR---RVGRRATRRSNFFP 120

Query: 121 SSRALPSTIAKRLVEKRTKVLRSLIPGGEFMEDEVLLIEEALDYIPFLQAQVDGMRFLAN 180
            S+A    +AKRLVEKR KVLRSL+PGGEFMEDEVLLIEE LDYI FL+AQVDGMRFLA+
Sbjct: 121 PSKAFARLVAKRLVEKRRKVLRSLVPGGEFMEDEVLLIEETLDYISFLRAQVDGMRFLAS 177

[Close]

BLAST of PI0021240 vs. TAIR 10
Match: AT4G30410.2 (sequence-specific DNA binding transcription factors )

HSP 1 Score: 105.1 bits (261), Expect = 5.8e-23
Identity = 72/180 (40.00%), Postives = 108/180 (60.00%), Query Frame = 0


Query: 1   MPNPNKLKQQFLKKWLVGQQSTTSSNTNMNFLDRKKAIKISADYAMAATRNGTTIWSRAI 60
           M   + + ++FLKKW +G Q    S  N +  +RKKAIK+SAD AMA+ R GTT WSRA+
Sbjct: 1   MQPTSSMNEEFLKKWQMGLQIFRPSIDNTSVHERKKAIKLSADVAMASLRKGTTCWSRAL 60

Query: 61  IAKSLKGHAPPKAILNRRTI----YTNLLRKKMTMTQLRKMGRKVGQKVGRKTVRRSRLP 120
           I K+    A     L R+ +       L+ KK+    +    RK+ ++  +   R+S+  
Sbjct: 61  IEKT----ATEDNFLVRQMLSGIKAETLINKKLPKKTV--CHRKIVRRSKKILRRKSKSA 120

Query: 121 SSRALPSTIAKRLVEKRTKVLRSLIPGGEFMEDEVLLIEEALDYIPFLQAQVDGMRFLAN 177
           S  A  +  AKRLV++RT+ LR+++PGGE M ++VLL++E LDYI  LQ QV+ MR + +
Sbjct: 121 SEEA--AAKAKRLVKRRTQGLRNVVPGGELMSNDVLLLQETLDYIVSLQTQVNVMRSIVD 172

[Close]

BLAST of PI0021240 vs. TAIR 10
Match: AT4G30410.1 (sequence-specific DNA binding transcription factors )

HSP 1 Score: 105.1 bits (261), Expect = 5.8e-23
Identity = 72/180 (40.00%), Postives = 108/180 (60.00%), Query Frame = 0


Query: 1   MPNPNKLKQQFLKKWLVGQQSTTSSNTNMNFLDRKKAIKISADYAMAATRNGTTIWSRAI 60
           M   + + ++FLKKW +G Q    S  N +  +RKKAIK+SAD AMA+ R GTT WSRA+
Sbjct: 1   MQPTSSMNEEFLKKWQMGLQIFRPSIDNTSVHERKKAIKLSADVAMASLRKGTTCWSRAL 60

Query: 61  IAKSLKGHAPPKAILNRRTI----YTNLLRKKMTMTQLRKMGRKVGQKVGRKTVRRSRLP 120
           I K+    A     L R+ +       L+ KK+    +    RK+ ++  +   R+S+  
Sbjct: 61  IEKT----ATEDNFLVRQMLSGIKAETLINKKLPKKTV--CHRKIVRRSKKILRRKSKSA 120

Query: 121 SSRALPSTIAKRLVEKRTKVLRSLIPGGEFMEDEVLLIEEALDYIPFLQAQVDGMRFLAN 177
           S  A  +  AKRLV++RT+ LR+++PGGE M ++VLL++E LDYI  LQ QV+ MR + +
Sbjct: 121 SEEA--AAKAKRLVKRRTQGLRNVVPGGELMSNDVLLLQETLDYIVSLQTQVNVMRSIVD 172

[Close]

BLAST of PI0021240 vs. TAIR 10
Match: AT5G57780.1 (EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 12 growth stages; BEST Arabidopsis thaliana protein match is: sequence-specific DNA binding transcription factors (TAIR:AT4G30410.1); Has 123 Blast hits to 123 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 123; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 100.5 bits (249), Expect = 1.4e-21
Identity = 67/172 (38.95%), Postives = 96/172 (55.81%), Query Frame = 0


Query: 5   NKLKQQFLKKWLVGQQSTTSSNTN-MNFLDRKKAIKISADYAMAATRNGTTIWSRAIIAK 64
           N +KQ+F+KKW+       SS  + +N  +RK AI++S+D AMAA RNG+T+WSRA+I++
Sbjct: 6   NMVKQEFIKKWINTLHMLDSSIEHPLNVTERKNAIRLSSDLAMAAARNGSTVWSRALISR 65

Query: 65  SLKGHAPPKAILNRRTIYTNLLRKKMTMTQLRKMGRKVGQKVGRKTVRRSRLPSSRALPS 124
           S  G+      + RR +     R K     LR+ G                        +
Sbjct: 66  S--GNKTANKPMARRILKKARNRMKNRCNILRRNG------------------------N 125

Query: 125 TIAKRLVEKRTKVLRSLIPGGEFMEDEVLLIEEALDYIPFLQAQVDGMRFLA 176
             AK  V KRT +L+SL+PGGE ++D+  LI E LDYI +L+AQVD MR +A
Sbjct: 126 FTAKTWVRKRTDLLKSLVPGGELIDDKDYLIRETLDYIVYLRAQVDVMRTVA 151

[Close]

BLAST of PI0021240 vs. TAIR 10
Match: AT1G09250.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 46.6 bits (109), Expect = 2.4e-05
Identity = 50/164 (30.49%), Postives = 73/164 (44.51%), Query Frame = 0


Query: 17  VGQQSTTSSNTNMNFL--DRKKAIKISADYAMAATRNGTTIWSRAIIAKSLKGHAPPKAI 76
           V Q+S+T+SN   + L     + I+ +AD  +AA+  GTT WSRAI+A            
Sbjct: 64  VRQRSSTTSNNETDKLVSGAAREIRDTADRVLAASARGTTRWSRAILAS----------- 123

Query: 77  LNRRTIYTNLLRKKMTMTQLRKMGRKVGQKVGRK---TVRRSRLPSSRALPSTIAKRLVE 136
                      R +  + + RK  +  G    RK      R +LP+            VE
Sbjct: 124 -----------RVRAKLKKHRKAKKSTGNCKSRKGLTETNRIKLPA------------VE 183

Query: 137 KRTKVLRSLIPGGEFMEDEVLLIEEALDYIPFLQAQVDGMRFLA 176
           ++ K+L  L+PG   +    LL +EA DYI  L+ QV  M  LA
Sbjct: 184 RKLKILGRLVPGCRKVSVPNLL-DEATDYIAALEMQVRAMEALA 192

[Close]

BLAST of PI0021240 vs. TAIR 10
Match: AT3G06590.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 46.2 bits (108), Expect = 3.2e-05
Identity = 50/169 (29.59%), Postives = 73/169 (43.20%), Query Frame = 0


Query: 6   KLKQQFLKKWLVGQQSTTSSNTNMNFLDRKKAIKISADYAMAATRNGTTIWSRAIIAKSL 65
           KL Q   +  L    ST+SS T      R KA++ +AD A+A +  G T+WSRAI+A  +
Sbjct: 60  KLFQALQQVRLNSSASTSSSPTAQK---RGKAVREAADRALAVSARGRTLWSRAILANRI 119

Query: 66  KGHAPPKAILNRRTIYTNLLRKKMTMTQLRKMGRKVGQKVGRKTVRRSRLPSSRALPSTI 125
           K          +R     +    MT        R   ++V    + +  +P         
Sbjct: 120 K-----LKFRKQRRPRATMAIPAMTTVVSSSSNRSRKRRVSVLRLNKKSIPD-------- 179

Query: 126 AKRLVEKRTKVLRSLIPGGEFMEDEVLLIEEALDYIPFLQAQVDGMRFL 175
               V ++ +VL  L+PG       V+L EEA DYI  L+ QV  M  L
Sbjct: 180 ----VNRKVRVLGRLVPGCGKQSVPVIL-EEATDYIQALEMQVRAMNSL 207

The following BLAST results are available for this feature:

BLAST of PI0021240 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9M0B9	8.1e-22	40.00	Transcription factor IBH1-like 1 OS=Arabidopsis thaliana OX=3702 GN=IBL1 PE=1 SV...	[more]
Q9LSN7	3.4e-04	30.00	Transcription factor bHLH147 OS=Arabidopsis thaliana OX=3702 GN=BHLH147 PE=1 SV=...	[more]
O80482	3.4e-04	30.49	Transcription factor bHLH149 OS=Arabidopsis thaliana OX=3702 GN=BHLH149 PE=1 SV=...	[more]
Q9C8Z9	4.5e-04	29.59	Transcription factor bHLH148 OS=Arabidopsis thaliana OX=3702 GN=BHLH148 PE=1 SV=...	[more]

BLAST of PI0021240 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CK75	1.3e-78	88.83	Transcription factor IBH1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffo...	[more]
A0A1S3BT01	9.2e-77	87.71	uncharacterized protein LOC103493395 OS=Cucumis melo OX=3656 GN=LOC103493395 PE=...	[more]
A0A0A0LM92	6.6e-75	86.74	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G047790 PE=4 SV=1	[more]
A0A6J1DKD7	2.2e-46	62.30	transcription factor IBH1-like 1 OS=Momordica charantia OX=3673 GN=LOC111020866 ...	[more]
A0A6J1FC37	1.5e-42	58.66	transcription factor IBH1-like 1 OS=Cucurbita moschata OX=3662 GN=LOC111444263 P...	[more]

BLAST of PI0021240 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0048635.1	2.6e-78	88.83	transcription factor IBH1 [Cucumis melo var. makuwa] >TYK10836.1 transcription f...	[more]
XP_008452339.1	1.9e-76	87.71	PREDICTED: uncharacterized protein LOC103493395 [Cucumis melo]	[more]
XP_004149100.1	1.4e-74	86.74	transcription factor IBH1-like 1 [Cucumis sativus] >KGN61086.1 hypothetical prot...	[more]
XP_038890559.1	1.5e-68	80.45	transcription factor IBH1-like 1 [Benincasa hispida]	[more]
XP_022153351.1	4.6e-46	62.30	transcription factor IBH1-like 1 [Momordica charantia]	[more]

BLAST of PI0021240 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G30410.2	5.8e-23	40.00	sequence-specific DNA binding transcription factors	[more]
AT4G30410.1	5.8e-23	40.00	sequence-specific DNA binding transcription factors	[more]
AT5G57780.1	1.4e-21	38.95	EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 12 growth stages; BEST Arab...	[more]
AT1G09250.1	2.4e-05	30.49	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT3G06590.1	3.2e-05	29.59	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR044660	Transcription factor IBH1-like	PANTHER	PTHR33124	TRANSCRIPTION FACTOR IBH1-LIKE 1	coord: 5..176
None	No IPR available	PANTHER	PTHR33124:SF5	TRANSCRIPTION FACTOR IBH1-LIKE 1	coord: 5..176
IPR044549	Transcription factor IBH1-like, bHLH domain	CDD	cd11444	bHLH_AtIBH1_like	coord: 123..175 e-value: 2.73064E-12 score: 56.862

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0021240.1	PI0021240.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0016020	membrane
cellular_component	GO:0005634	nucleus
molecular_function	GO:0046983	protein dimerization activity
molecular_function	GO:0000976	transcription cis-regulatory region binding