PI0021201 (gene) Melon (PI 482460) v1

Overview
NamePI0021201
Typegene
OrganismCucumis metuliferus (Melon (PI 482460) v1)
DescriptionDrebrin-like
Locationchr07: 11405724 .. 11405939 (-)
RNA-Seq ExpressionPI0021201
SyntenyPI0021201
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCTTCACGCCATATTAGCACGATTTCCTTGGACAAAGCGATGCTCCTCTATTGCATCTTGGAGGAGACACCTATCAATATAGGCGAAATCATCTGTCAACAAATCCACTCGTGGGTAAGGCATCCACGCGACACAAGACCATTTTCACACTTAATTGAGACTTTATGTTTGAAGGCTTGTCACACGTTGAAAACTCTCCCACAATATCCGTGA

mRNA sequence

ATGCCTTCACGCCATATTAGCACGATTTCCTTGGACAAAGCGATGCTCCTCTATTGCATCTTGGAGGAGACACCTATCAATATAGGCGAAATCATCTGTCAACAAATCCACTCGTGGGTAAGGCATCCACGCGACACAAGACCATTTTCACACTTAATTGAGACTTTATGTTTGAAGGCTTGTCACACGTTGAAAACTCTCCCACAATATCCGTGA

Coding sequence (CDS)

ATGCCTTCACGCCATATTAGCACGATTTCCTTGGACAAAGCGATGCTCCTCTATTGCATCTTGGAGGAGACACCTATCAATATAGGCGAAATCATCTGTCAACAAATCCACTCGTGGGTAAGGCATCCACGCGACACAAGACCATTTTCACACTTAATTGAGACTTTATGTTTGAAGGCTTGTCACACGTTGAAAACTCTCCCACAATATCCGTGA

Protein sequence

MPSRHISTISLDKAMLLYCILEETPINIGEIICQQIHSWVRHPRDTRPFSHLIETLCLKACHTLKTLPQYP
Homology
BLAST of PI0021201 vs. ExPASy TrEMBL
Match: A0A5A7SRQ1 (Drebrin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold156G00660 PE=4 SV=1)

HSP 1 Score: 107.8 bits (268), Expect = 1.8e-20
Identity = 44/69 (63.77%), Postives = 59/69 (85.51%), Query Frame = 0

Query: 1  MPSRHISTISLDKAMLLYCILEETPINIGEIICQQIHSWVRHPRDTRPFSHLIETLCLKA 60
          MP+RH +TIS+DK +L+YCI+EE P+N+GEIIC+ I +WV+HP+ +RPF HLIE LCLKA
Sbjct: 1  MPTRHDNTISMDKIVLIYCIMEELPVNVGEIICEHIFAWVKHPQGSRPFPHLIEKLCLKA 60

Query: 61 CHTLKTLPQ 70
          C +L+ LPQ
Sbjct: 61 CPSLEKLPQ 69

BLAST of PI0021201 vs. ExPASy TrEMBL
Match: A0A5A7V2V0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold137G00650 PE=4 SV=1)

HSP 1 Score: 97.8 bits (242), Expect = 1.9e-17
Identity = 42/69 (60.87%), Postives = 53/69 (76.81%), Query Frame = 0

Query: 1  MPSRHISTISLDKAMLLYCILEETPINIGEIICQQIHSWVRHPRDTRPFSHLIETLCLKA 60
          MP+RH STIS+DK M +YCI+EE P N+ EIIC+ I + V+HP D RPF HLIE LCLKA
Sbjct: 7  MPTRHDSTISMDKIMFIYCIIEEIPRNVSEIICEHIIACVKHPHDARPFPHLIEELCLKA 66

Query: 61 CHTLKTLPQ 70
          C  L+ +P+
Sbjct: 67 CMALEKIPR 75

BLAST of PI0021201 vs. ExPASy TrEMBL
Match: A0A0A0LAY9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G511970 PE=4 SV=1)

HSP 1 Score: 97.4 bits (241), Expect = 2.5e-17
Identity = 42/65 (64.62%), Postives = 52/65 (80.00%), Query Frame = 0

Query: 1   MPSRHISTISLDKAMLLYCILEETPINIGEIICQQIHSWVRHPRDTRPFSHLIETLCLKA 60
           M +R  STIS+DK ML+YCI+EE P+N+GEIIC+ I +W++HP D RPF HLIE LCLKA
Sbjct: 106 MSTRPDSTISMDKIMLIYCIMEEIPVNVGEIICKHILAWIKHPHDGRPFLHLIEKLCLKA 165

Query: 61  CHTLK 66
           C T K
Sbjct: 166 CLTKK 170

BLAST of PI0021201 vs. ExPASy TrEMBL
Match: A0A5A7TKD3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold602G001850 PE=4 SV=1)

HSP 1 Score: 97.1 bits (240), Expect = 3.2e-17
Identity = 42/69 (60.87%), Postives = 54/69 (78.26%), Query Frame = 0

Query: 1  MPSRHISTISLDKAMLLYCILEETPINIGEIICQQIHSWVRHPRDTRPFSHLIETLCLKA 60
          MP+RH +TI +D+ ML+YCI+EE  +N+GEIIC+   +WV+HPR   PF HLIE LCLKA
Sbjct: 17 MPTRHDNTIFVDQIMLIYCIMEELLVNMGEIICEHDLAWVKHPRGATPFPHLIEKLCLKA 76

Query: 61 CHTLKTLPQ 70
          C TL+ LPQ
Sbjct: 77 CLTLEKLPQ 85

BLAST of PI0021201 vs. ExPASy TrEMBL
Match: A0A5D3BT56 (Protein MNN4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold388G00640 PE=4 SV=1)

HSP 1 Score: 97.1 bits (240), Expect = 3.2e-17
Identity = 43/69 (62.32%), Postives = 54/69 (78.26%), Query Frame = 0

Query: 1   MPSRHISTISLDKAMLLYCILEETPINIGEIICQQIHSWVRHPRDTRPFSHLIETLCLKA 60
           MP+R  STIS+++ ML+YCI+EE P+NIGEII + I +WV+HPR  R FSH I+ LCLKA
Sbjct: 103 MPTRRDSTISMERIMLIYCIIEEIPVNIGEIISEHIIAWVKHPRRARSFSHQIDKLCLKA 162

Query: 61  CHTLKTLPQ 70
           C TL  LPQ
Sbjct: 163 CLTLDKLPQ 171

BLAST of PI0021201 vs. NCBI nr
Match: KAA0032726.1 (drebrin-like [Cucumis melo var. makuwa] >TYJ98758.1 drebrin-like [Cucumis melo var. makuwa])

HSP 1 Score: 107.8 bits (268), Expect = 3.8e-20
Identity = 44/69 (63.77%), Postives = 59/69 (85.51%), Query Frame = 0

Query: 1  MPSRHISTISLDKAMLLYCILEETPINIGEIICQQIHSWVRHPRDTRPFSHLIETLCLKA 60
          MP+RH +TIS+DK +L+YCI+EE P+N+GEIIC+ I +WV+HP+ +RPF HLIE LCLKA
Sbjct: 1  MPTRHDNTISMDKIVLIYCIMEELPVNVGEIICEHIFAWVKHPQGSRPFPHLIEKLCLKA 60

Query: 61 CHTLKTLPQ 70
          C +L+ LPQ
Sbjct: 61 CPSLEKLPQ 69

BLAST of PI0021201 vs. NCBI nr
Match: KAA0060836.1 (hypothetical protein E6C27_scaffold137G00650 [Cucumis melo var. makuwa])

HSP 1 Score: 97.8 bits (242), Expect = 3.9e-17
Identity = 42/69 (60.87%), Postives = 53/69 (76.81%), Query Frame = 0

Query: 1  MPSRHISTISLDKAMLLYCILEETPINIGEIICQQIHSWVRHPRDTRPFSHLIETLCLKA 60
          MP+RH STIS+DK M +YCI+EE P N+ EIIC+ I + V+HP D RPF HLIE LCLKA
Sbjct: 7  MPTRHDSTISMDKIMFIYCIIEEIPRNVSEIICEHIIACVKHPHDARPFPHLIEELCLKA 66

Query: 61 CHTLKTLPQ 70
          C  L+ +P+
Sbjct: 67 CMALEKIPR 75

BLAST of PI0021201 vs. NCBI nr
Match: TYK02168.1 (protein MNN4-like [Cucumis melo var. makuwa])

HSP 1 Score: 97.1 bits (240), Expect = 6.7e-17
Identity = 43/69 (62.32%), Postives = 54/69 (78.26%), Query Frame = 0

Query: 1   MPSRHISTISLDKAMLLYCILEETPINIGEIICQQIHSWVRHPRDTRPFSHLIETLCLKA 60
           MP+R  STIS+++ ML+YCI+EE P+NIGEII + I +WV+HPR  R FSH I+ LCLKA
Sbjct: 103 MPTRRDSTISMERIMLIYCIIEEIPVNIGEIISEHIIAWVKHPRRARSFSHQIDKLCLKA 162

Query: 61  CHTLKTLPQ 70
           C TL  LPQ
Sbjct: 163 CLTLDKLPQ 171

BLAST of PI0021201 vs. NCBI nr
Match: KAA0042406.1 (hypothetical protein E6C27_scaffold943G00160 [Cucumis melo var. makuwa] >TYK00990.1 hypothetical protein E5676_scaffold602G001850 [Cucumis melo var. makuwa])

HSP 1 Score: 97.1 bits (240), Expect = 6.7e-17
Identity = 42/69 (60.87%), Postives = 54/69 (78.26%), Query Frame = 0

Query: 1  MPSRHISTISLDKAMLLYCILEETPINIGEIICQQIHSWVRHPRDTRPFSHLIETLCLKA 60
          MP+RH +TI +D+ ML+YCI+EE  +N+GEIIC+   +WV+HPR   PF HLIE LCLKA
Sbjct: 17 MPTRHDNTIFVDQIMLIYCIMEELLVNMGEIICEHDLAWVKHPRGATPFPHLIEKLCLKA 76

Query: 61 CHTLKTLPQ 70
          C TL+ LPQ
Sbjct: 77 CLTLEKLPQ 85

BLAST of PI0021201 vs. NCBI nr
Match: KAA0054837.1 (hypothetical protein E6C27_scaffold406G00150 [Cucumis melo var. makuwa] >TYK27771.1 hypothetical protein E5676_scaffold1142G00370 [Cucumis melo var. makuwa])

HSP 1 Score: 95.9 bits (237), Expect = 1.5e-16
Identity = 39/69 (56.52%), Postives = 53/69 (76.81%), Query Frame = 0

Query: 1   MPSRHISTISLDKAMLLYCILEETPINIGEIICQQIHSWVRHPRDTRPFSHLIETLCLKA 60
           MP+RH +TIS ++ MLLYCI+EE P+++ EIIC  I +WV+HPR  +PF HLIE LCL++
Sbjct: 211 MPTRHDNTISFERIMLLYCIMEEIPVDVDEIICDHIKAWVQHPRGAKPFPHLIERLCLRS 270

Query: 61  CHTLKTLPQ 70
           C  L+  PQ
Sbjct: 271 CSELEQSPQ 279

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5A7SRQ11.8e-2063.77Drebrin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold156G00660 P... [more]
A0A5A7V2V01.9e-1760.87Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A0A0LAY92.5e-1764.62Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G511970 PE=4 SV=1[more]
A0A5A7TKD33.2e-1760.87Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5D3BT563.2e-1762.32Protein MNN4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold388G00... [more]
Match NameE-valueIdentityDescription
KAA0032726.13.8e-2063.77drebrin-like [Cucumis melo var. makuwa] >TYJ98758.1 drebrin-like [Cucumis melo v... [more]
KAA0060836.13.9e-1760.87hypothetical protein E6C27_scaffold137G00650 [Cucumis melo var. makuwa][more]
TYK02168.16.7e-1762.32protein MNN4-like [Cucumis melo var. makuwa][more]
KAA0042406.16.7e-1760.87hypothetical protein E6C27_scaffold943G00160 [Cucumis melo var. makuwa] >TYK0099... [more]
KAA0054837.11.5e-1656.52hypothetical protein E6C27_scaffold406G00150 [Cucumis melo var. makuwa] >TYK2777... [more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
PI0021201.1PI0021201.1mRNA