PI0021188 (gene) Melon (PI 482460) v1

Overview
NamePI0021188
Typegene
OrganismCucumis metuliferus (Melon (PI 482460) v1)
DescriptionTranspos_assoc domain-containing protein
Locationchr02: 5474477 .. 5474902 (+)
RNA-Seq ExpressionPI0021188
SyntenyPI0021188
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTTAGACAAAGAATGTTCAATAAAGAGTGGGTACATTTGAACATGTACAACAATGTAATAATTTATTAAAAAACCAACAATTAGAAGTAGTTTTCCAATTTTAAATGATGAACATTTGGATTTTTTTTAGAGCCACAGACGAGCATATGAAAGGGGCATGGGAGTTTGTAGAGAAAGTAAAGAAGGATGCAATAGATGTGGATTTGGTTATGTGCCCTTGCAAGGATTGTAGAACACATGAGTCATCAATCCTTTGATATTGTTTACGAGCATTTAGTCATTAAGGGAATGGACCTAAGATATAAGATTTGGTACCATCATGGGGAGGAAGTTTGTGTAAGGGAAGAAATTGAGGATGTAGATATGTTTGATGTATTTAACATGTATAACTGCATATGTAAGAGAAGAAGTAAATGTTATTGA

mRNA sequence

ATGTTTAGACAAAGAATGTTCAATAAAGAGTGGGTACATTTGAACATAGCCACAGACGAGCATATGAAAGGGGCATGGGAGTTTGTAGAGAAAGTAAAGAAGGATGCAATAGATGTGGATTTGGTTATTCATCAATCCTTTGATATTGTTTACGAGCATTTAGTCATTAAGGGAATGGACCTAAGATATAAGATTTGGTACCATCATGGGGAGGAAGTTTGTGTAAGGGAAGAAATTGAGGATGTAGATATGTTTGATGTATTTAACATGTATAACTGCATATGTAAGAGAAGAAGTAAATGTTATTGA

Coding sequence (CDS)

ATGTTTAGACAAAGAATGTTCAATAAAGAGTGGGTACATTTGAACATAGCCACAGACGAGCATATGAAAGGGGCATGGGAGTTTGTAGAGAAAGTAAAGAAGGATGCAATAGATGTGGATTTGGTTATTCATCAATCCTTTGATATTGTTTACGAGCATTTAGTCATTAAGGGAATGGACCTAAGATATAAGATTTGGTACCATCATGGGGAGGAAGTTTGTGTAAGGGAAGAAATTGAGGATGTAGATATGTTTGATGTATTTAACATGTATAACTGCATATGTAAGAGAAGAAGTAAATGTTATTGA

Protein sequence

MFRQRMFNKEWVHLNIATDEHMKGAWEFVEKVKKDAIDVDLVIHQSFDIVYEHLVIKGMDLRYKIWYHHGEEVCVREEIEDVDMFDVFNMYNCICKRRSKCY
Homology
BLAST of PI0021188 vs. ExPASy TrEMBL
Match: A0A0A0KCH8 (Transpos_assoc domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G237080 PE=4 SV=1)

HSP 1 Score: 154.5 bits (389), Expect = 2.5e-34
Identity = 74/100 (74.00%), Postives = 81/100 (81.00%), Query Frame = 0

Query: 1   MFRQRMFNKEWVHLNIATDEHMKGAWEFVEKVKKDAIDVDLVI----------HQSFDIV 60
           MF +RMFNKEWVHLN ATDE+MKGAWEF+EKVKKD   VDL++          HQSFDIV
Sbjct: 1   MFGERMFNKEWVHLNRATDEYMKGAWEFIEKVKKDVTYVDLIMCPCKDCRDMSHQSFDIV 60

Query: 61  YEHLVIKGMDLRYKIWYHHGEEVCVREEIEDVDMFDVFNM 91
           YEHLVIKGMD  YKI YHHGEEVCV+EE+ED DMFDVFNM
Sbjct: 61  YEHLVIKGMDPTYKILYHHGEEVCVKEEVEDADMFDVFNM 100

BLAST of PI0021188 vs. ExPASy TrEMBL
Match: A0A5A7UNZ2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold80G00030 PE=4 SV=1)

HSP 1 Score: 108.6 bits (270), Expect = 1.5e-20
Identity = 52/71 (73.24%), Postives = 56/71 (78.87%), Query Frame = 0

Query: 6  MFNKEWVHLNIATDEHMKGAWEFVEKVKKDAIDVDLVI----------HQSFDIVYEHLV 65
          MFNKEWVHLN ATDE+MKG WEFVEKVKKDA DVDL++          HQSFD+VYEHLV
Sbjct: 1  MFNKEWVHLNRATDEYMKGVWEFVEKVKKDATDVDLIMCPSKDCRNMSHQSFDVVYEHLV 60

Query: 66 IKGMDLRYKIW 67
          IKGMD  YKIW
Sbjct: 61 IKGMDPTYKIW 71

BLAST of PI0021188 vs. ExPASy TrEMBL
Match: A0A5A7UPM1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold226G00340 PE=4 SV=1)

HSP 1 Score: 92.8 bits (229), Expect = 8.8e-16
Identity = 42/80 (52.50%), Postives = 57/80 (71.25%), Query Frame = 0

Query: 6  MFNKEWVHLNIATDEHMKGAWEFVEKVKKDAIDVDLV----------IHQSFDIVYEHLV 65
          MF K+WVHLN AT+E+++GAW+F+++V+     +D +           HQ+FD+VYEHLV
Sbjct: 1  MFQKDWVHLNRATNEYLRGAWDFMKQVENMLGGIDKIPCPCKTCRNMNHQTFDVVYEHLV 60

Query: 66 IKGMDLRYKIWYHHGEEVCV 76
          IKGMD  Y+ WYHHGEEV V
Sbjct: 61 IKGMDPTYRFWYHHGEEVPV 80

BLAST of PI0021188 vs. ExPASy TrEMBL
Match: A0A5A7SMK7 (Transpos_assoc domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold417G00730 PE=4 SV=1)

HSP 1 Score: 82.0 bits (201), Expect = 1.6e-12
Identity = 39/59 (66.10%), Postives = 45/59 (76.27%), Query Frame = 0

Query: 6  MFNKEWVHLNIATDEHMKGAWEFVEKVKKDAIDVDLVI----------HQSFDIVYEHL 55
          MFNK+WVHLN A DE+MKGAWEF+EKVKKDA DVDL++          HQS D+VYEHL
Sbjct: 1  MFNKKWVHLNRAKDEYMKGAWEFMEKVKKDATDVDLIMCPCKDCRNMSHQSLDVVYEHL 59

BLAST of PI0021188 vs. ExPASy TrEMBL
Match: A0A5D3DFK8 (Transpos_assoc domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold19523G00030 PE=4 SV=1)

HSP 1 Score: 80.5 bits (197), Expect = 4.5e-12
Identity = 39/55 (70.91%), Postives = 43/55 (78.18%), Query Frame = 0

Query: 6  MFNKEWVHLNIATDEHMKGAWEFVEKVKKDAIDVDLVI----------HQSFDIV 51
          MFNKEWVHLN ATDE+MKGAWEFVEKVKKDA DVDL++          HQSFD+V
Sbjct: 1  MFNKEWVHLNRATDEYMKGAWEFVEKVKKDATDVDLIMCPCKDCRNMSHQSFDVV 55

BLAST of PI0021188 vs. NCBI nr
Match: KGN47253.1 (hypothetical protein Csa_017000 [Cucumis sativus])

HSP 1 Score: 154.5 bits (389), Expect = 5.1e-34
Identity = 74/100 (74.00%), Postives = 81/100 (81.00%), Query Frame = 0

Query: 1   MFRQRMFNKEWVHLNIATDEHMKGAWEFVEKVKKDAIDVDLVI----------HQSFDIV 60
           MF +RMFNKEWVHLN ATDE+MKGAWEF+EKVKKD   VDL++          HQSFDIV
Sbjct: 1   MFGERMFNKEWVHLNRATDEYMKGAWEFIEKVKKDVTYVDLIMCPCKDCRDMSHQSFDIV 60

Query: 61  YEHLVIKGMDLRYKIWYHHGEEVCVREEIEDVDMFDVFNM 91
           YEHLVIKGMD  YKI YHHGEEVCV+EE+ED DMFDVFNM
Sbjct: 61  YEHLVIKGMDPTYKILYHHGEEVCVKEEVEDADMFDVFNM 100

BLAST of PI0021188 vs. NCBI nr
Match: KAA0055179.1 (uncharacterized protein E6C27_scaffold80G00030 [Cucumis melo var. makuwa])

HSP 1 Score: 108.6 bits (270), Expect = 3.2e-20
Identity = 52/71 (73.24%), Postives = 56/71 (78.87%), Query Frame = 0

Query: 6  MFNKEWVHLNIATDEHMKGAWEFVEKVKKDAIDVDLVI----------HQSFDIVYEHLV 65
          MFNKEWVHLN ATDE+MKG WEFVEKVKKDA DVDL++          HQSFD+VYEHLV
Sbjct: 1  MFNKEWVHLNRATDEYMKGVWEFVEKVKKDATDVDLIMCPSKDCRNMSHQSFDVVYEHLV 60

Query: 66 IKGMDLRYKIW 67
          IKGMD  YKIW
Sbjct: 61 IKGMDPTYKIW 71

BLAST of PI0021188 vs. NCBI nr
Match: KAA0056266.1 (uncharacterized protein E6C27_scaffold226G00340 [Cucumis melo var. makuwa])

HSP 1 Score: 92.8 bits (229), Expect = 1.8e-15
Identity = 42/80 (52.50%), Postives = 57/80 (71.25%), Query Frame = 0

Query: 6  MFNKEWVHLNIATDEHMKGAWEFVEKVKKDAIDVDLV----------IHQSFDIVYEHLV 65
          MF K+WVHLN AT+E+++GAW+F+++V+     +D +           HQ+FD+VYEHLV
Sbjct: 1  MFQKDWVHLNRATNEYLRGAWDFMKQVENMLGGIDKIPCPCKTCRNMNHQTFDVVYEHLV 60

Query: 66 IKGMDLRYKIWYHHGEEVCV 76
          IKGMD  Y+ WYHHGEEV V
Sbjct: 61 IKGMDPTYRFWYHHGEEVPV 80

BLAST of PI0021188 vs. NCBI nr
Match: KAA0025471.1 (uncharacterized protein E6C27_scaffold417G00730 [Cucumis melo var. makuwa])

HSP 1 Score: 82.0 bits (201), Expect = 3.2e-12
Identity = 39/59 (66.10%), Postives = 45/59 (76.27%), Query Frame = 0

Query: 6  MFNKEWVHLNIATDEHMKGAWEFVEKVKKDAIDVDLVI----------HQSFDIVYEHL 55
          MFNK+WVHLN A DE+MKGAWEF+EKVKKDA DVDL++          HQS D+VYEHL
Sbjct: 1  MFNKKWVHLNRAKDEYMKGAWEFMEKVKKDATDVDLIMCPCKDCRNMSHQSLDVVYEHL 59

BLAST of PI0021188 vs. NCBI nr
Match: XP_024017632.1 (uncharacterized protein LOC112090485 [Morus notabilis])

HSP 1 Score: 80.9 bits (198), Expect = 7.1e-12
Identity = 41/97 (42.27%), Postives = 59/97 (60.82%), Query Frame = 0

Query: 5   RMFNKEWVHLNIATDEHMKGAWEFVEKVKKD----------AIDVDLVIHQSFDIVYEHL 64
           +M +K+WV  N  T E+M+ A +FV+ V+K+            +   + HQ  +IVYEHL
Sbjct: 8   KMLDKDWVRDNRLTVEYMQSAQKFVKTVEKNFGYPEKLLCPCKECRNLSHQRGNIVYEHL 67

Query: 65  VIKGMDLRYKIWYHHGEEVCVREEIEDVDMFDVFNMY 92
           VI GMD  Y  W+HHGEEV   EE+E+VD  D++ +Y
Sbjct: 68  VINGMDPTYTTWFHHGEEVNTNEELENVDKNDIYELY 104

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0KCH82.5e-3474.00Transpos_assoc domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G237... [more]
A0A5A7UNZ21.5e-2073.24Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A5A7UPM18.8e-1652.50Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A5A7SMK71.6e-1266.10Transpos_assoc domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 ... [more]
A0A5D3DFK84.5e-1270.91Transpos_assoc domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 ... [more]
Match NameE-valueIdentityDescription
KGN47253.15.1e-3474.00hypothetical protein Csa_017000 [Cucumis sativus][more]
KAA0055179.13.2e-2073.24uncharacterized protein E6C27_scaffold80G00030 [Cucumis melo var. makuwa][more]
KAA0056266.11.8e-1552.50uncharacterized protein E6C27_scaffold226G00340 [Cucumis melo var. makuwa][more]
KAA0025471.13.2e-1266.10uncharacterized protein E6C27_scaffold417G00730 [Cucumis melo var. makuwa][more]
XP_024017632.17.1e-1242.27uncharacterized protein LOC112090485 [Morus notabilis][more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
PI0021188.1PI0021188.1mRNA