PI0021137 (gene) Melon (PI 482460) v1

Overview
NamePI0021137
Typegene
OrganismCucumis metuliferus (Melon (PI 482460) v1)
DescriptionFiber protein fb11
Locationchr11: 2262535 .. 2266625 (-)
RNA-Seq ExpressionPI0021137
SyntenyPI0021137
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GTTTTTAGTCCGGCTCGTTAGAGAATTGCAAATCTTTTCACTCAATTAACTTTGGACTTTGAAGAATCAAGCCACGAACACGAACGGTCAGCGAATCAGAAGAAAGTTTCGAGAAAATGCCGGTCATGGAGAAGCTGAAGATGTTCGTAGTTCAAGAGCCCGTGGTGGCTGCATCTTGTTTAATCGGAGGAATTGGTACTTAACTCTTTCCTGTTTAGAAGCCCTAATTATTGTTCAATTTTCCACTTCTTATGATTCATGACAATGAACCATATGCGTTGTTTGAATTGTCGCTCAGATCCATCTATTCGGAAGAGCATATTTAAATGTTTTATTTTTTGTGGGTATTCTATATGGTTTAGGATGCGATGAAACTAGGACGATTGAAATCTCCTTATTTGGGTAAATGGATTTTCGTATTTGAATATTTTTCGTCGGATTTAGCTTTGCCAGTAGATATTTTGTTTGGGTTTTTCTAGTTATCGTAAATTAGTTAAGATGTTGGGATTATTGGTTTTAATACTTATTACTGTTCGAGATAGGAGTTTTGGAATTATGAGCTAGTTATCAATTGAAAGTAGCTGCTAGCCTAAGGGATATCTACCTTTTTTATGAGCTTTTTTAAGCTTCCATTCAAGCTGTGGCAATGAATCAATGAACTTTATTAATGTGTTTCAGTTTCAATATTAGCTGGTGAGATTCCAATAGGACCTTGGTTTTTCAGACCTCTCTATTTGAACCAAATATGCTAAGCAAGGTTGGAAATTTATCGAGGTTTCTAGTAGTTCGATTGTTAAAATTCTGAGAGGGAAGAAAGGAACATTTTTCTGAGCTGTGGTACGTGGGGAGAAAACTTTCAAAAGGGGAGATTAGATTGAAATTGGAACGGAATGTTAGTTAACATGACCTCTTGACCATTGGATTTGTAGAGCTGCTAAAGCAAATATTTCTGTTGGACCTCCTAGCCAATGTTTTGGAAAGCATGAAGTGCAGTAATTCTTTAGGACTTAAGCCAGAACCACAAAAAAGGTGAGAGCTTCAGCAAGGTAAAACTTACAATGTATGAAAAAGGTCCCTTCAGTATGAGACAAGTATGAGACAGAAAAATAAGGATAAACTATTAAAGATGAACAATGGTTCGTGAACAAAGAATCTACAAAATCTTACAAATATAATTCTAAGTTACGTATGGGTACCCTAAGAAGAGACATGTCTTCACTAAATAGGTCCTCAGTTCCAGTTCTGCCATAACTAGTCTTATGTGATCCGTTACCTTTTGACAAGACATAGGGCACACTTTGGGTGGGATGGATGAACAAAGGAGAGCTGCAGGCTTTTTCTTAAACTTCTTTCTCTATCTAATTTATCTGTAGTTTGTGAAAAGAATGTTGCTTATCACTCAGCAATATGAGATGCTTCACCTGGCTTTAGCATTAAATGTGCAAGCATATGTTTTGGTTTCATGTCTATCTTTTGGCTTTGGTGCATAAGGATTTTAAACTTTTCCTTCAGGTCTTGTTTTTGTTAGATAACTTAGATTGGAGTCTGTTTTTGTGTTGTTGCCTCATTTTGTAGGGTTGTCTTTTTGTACGCTTGTATTCTTTCATTTCTTTGTGATAAGATAACACATGGTTTTGCACTTGAACAAAAAGAATCTTCAACATACTATTTGCTTTGCCTTTCGTCTAGCTGCTTCCTTTCCTCATGATTTCTGGTGTACTCCTTGTCTCCTGTGCTCTCAAGTCTCGACTTCAATAAATTGCTTTTTAATAACCTCATAACTGCATGAGTGTTGAAATTAAATATCCCCTTATCCTTATTTGTTAAGGAATTTGTCTCTGCTTTGTTCAGACTACTCAAGCAAAACTATCCTCTAACATGCCTGATGGAACACATCACGCCACCACATCAGAAGCAACCACTTATTCCACAGTTTTTACATTGTCGTGTCTATCAGCAGATTTTCTATTACCGTTTGACCCAGCAATCTTATATTTTGTTCCATCTTTCAAATTCTCGCCACCAGATCCAACTTCAGCTGATAACCCCTATGCTCCCCAACATTTAGCAACCTACCAGAGTTTGAAGCTACTACCTGCATAAGTATACCAACTAGTCACAAGTGTCAAATGAAGTACAATAGATAGCAAATTTATTGGACCTCAGCAACAAAAAAGATTACATTAGAATTCTAATGCAATATCAAAGAAAATGTATAACAATGAAAGTCCTTTTTTGAGGACTCTCTTTTCCACAAGGCAACTAATTCACAAAGTTTTGCCAAACTTAACTCTCACTATTATTGCTCTGGTACCTCCTCGGAATCCAAAGTCTTCTTCAGCATGCCCCTATCTCGTTAGGTTCATGCTTCCTTGGTATGGTAGTATAGTTGGTTATTACCTTCTGTCCCAACAACTTCTTAGTTTATTACAAATATGCCCATGTTAAGTGTGAATATCCCTAGTAACATTCTACTATTTCCCTACAGGTGTTGTACACATGGGAACAAAAAACACTATCCCAATTCAGAGTTGTCTCCGGGAACTTCACTAGTTATGTTGATATCATTTAATTCACCATCATTCCATCAACTTCATCTCCTTATCAGTTCTAGCAGTCGAAGATCTCTTCTGATTTTTCACCTTCCTTGATCCGATTCTATTTGTTCTTGAAGCATTGCTGATTCGTTTAGCATTTTCATTTCCAAAGTGTAAAACATAATCAAATCTTTGTACACATCAGCCATCACCACTTGAACCACAGAACTTCCAGTATTCGGAATTTAATTTTAATATTGAATGAAGCTGCATACGTTTTCTCTAACTTGTATCCAAGCTAAACAATTAATCAAATTGGTAGTCACGGACATGCCTAGGATGAAACTCTATCTAGATCCAAAATTTCAAAGGTTTCTTAAGGTAGTGCTGCATTTGGATTTTTTTGGGTTTTTTAGCATTTCATATTTCAAGCTCACTCTGAAAAATACAAAAACTGAACTAAAACAAAAAAAAAAAAGACTTATTTCTTCCCTACAACTAATGAACTCCCCCTTTCACCATCTTGGTGAAGTGTGAGAGAATGAGACAAGCACCCCCTTACCTTCTTCGTTTGTCGTGATGAAAAGACAGATTGAGGCCAATTTTTACATGTATTGACTATATGTATACACTTTATGCGTTGATTGGCTACCACATGGAACATATATCTACTTTTTGGTTTCTAACATGTTACAACCCTTGTAGGTCTTTTCCTTCCAGCCTTCGTAAGGCCAATTCTGGATTCCTATGAAGCATCTAAGCAAGTTCCTCAGCCTGTATTAAGTGATGTAAGTACCATATCTTGACGAATGCTAGAAATTCATGTTTTTCTGATAGTGTGATTCTGGTTGGATCATTTGAACTAAATGCGCATGTGAGTTCCTTTGCTTGTTTCTGTATGTGAGTTTCTTTTTCCCATTAGAATCCTCACTTTTCAGCCTCTGGCAAGTGAGATTTCTTGCCTTGCCTAAAACATATGCCATCCATTATCTAACTTGGGAACAATCAATAAAACTTACCTTGAAAATGAAGTTTTAATATGAAACAAACCTATTGCCACGGGCTTTTTTTTAGTTCATTCTCATTTTAGTGCATCTCAAGTTTGGTGTCATTAATCATTCAATTTCTTACAATGTTCATTGTAAATTTTTGTATTGTCAACTTTGCAGGTGGTTGCAGGTATGACTGGAAAGAAATAAGGATGATCTGTATCAGTGACACAAGAAGATTGTTCTTAATGTATCACTGGTTCTCTTTTTTTAATCAATTTTCATTTTCTTCTGCCATAAAATAAGCATGTACAATGTTTTTGGAAATCAAGCTTCATAGCAATAGTTATTATCAAACATTGCCTTTGTTTTATTCCCATGTACAAGTCTGATTTTCAAGATATTTAGCTTTAATCAGTCCTTTTGAAGCCTGAGTGAAACTTGTTTCACCATTAATTGAGGTCTATAAACTCGTTTGGTTCTTTTAAGGTGGGATTGAACAATTGACCTTTGAGATGATATCCTCCAAGCTATAAAGTCGTTTGGTTTGTATTCTTTCCGTCAA

mRNA sequence

GTTTTTAGTCCGGCTCGTTAGAGAATTGCAAATCTTTTCACTCAATTAACTTTGGACTTTGAAGAATCAAGCCACGAACACGAACGGTCAGCGAATCAGAAGAAAGTTTCGAGAAAATGCCGGTCATGGAGAAGCTGAAGATGTTCGTAGTTCAAGAGCCCGTGGTGGCTGCATCTTGTTTAATCGGAGGAATTGGTCTTTTCCTTCCAGCCTTCGTAAGGCCAATTCTGGATTCCTATGAAGCATCTAAGCAAGTTCCTCAGCCTGTATTAAGTGATGTGGTTGCAGGTATGACTGGAAAGAAATAAGGATGATCTGTATCAGTGACACAAGAAGATTGTTCTTAATGTATCACTGGTTCTCTTTTTTTAATCAATTTTCATTTTCTTCTGCCATAAAATAAGCATGTACAATGTTTTTGGAAATCAAGCTTCATAGCAATAGTTATTATCAAACATTGCCTTTGTTTTATTCCCATGTACAAGTCTGATTTTCAAGATATTTAGCTTTAATCAGTCCTTTTGAAGCCTGAGTGAAACTTGTTTCACCATTAATTGAGGTCTATAAACTCGTTTGGTTCTTTTAAGGTGGGATTGAACAATTGACCTTTGAGATGATATCCTCCAAGCTATAAAGTCGTTTGGTTTGTATTCTTTCCGTCAA

Coding sequence (CDS)

ATGCCGGTCATGGAGAAGCTGAAGATGTTCGTAGTTCAAGAGCCCGTGGTGGCTGCATCTTGTTTAATCGGAGGAATTGGTCTTTTCCTTCCAGCCTTCGTAAGGCCAATTCTGGATTCCTATGAAGCATCTAAGCAAGTTCCTCAGCCTGTATTAAGTGATGTGGTTGCAGGTATGACTGGAAAGAAATAA

Protein sequence

MPVMEKLKMFVVQEPVVAASCLIGGIGLFLPAFVRPILDSYEASKQVPQPVLSDVVAGMTGKK
Homology
[Close]
BLAST of PI0021137 vs. ExPASy TrEMBL
Match: E5GCM8 (Fiber protein fb11 OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 121.7 bits (304), Expect = 1.1e-24
Identity = 61/63 (96.83%), Postives = 62/63 (98.41%), Query Frame = 0 

Query: 1  MPVMEKLKMFVVQEPVVAASCLIGGIGLFLPAFVRPILDSYEASKQVPQPVLSDVVAGMT 60
          MPVMEKLKMFVVQEPVVAASC+IGGIGLFLPAFVRPILDSYEASKQVPQPVLSDVVA MT
Sbjct: 1  MPVMEKLKMFVVQEPVVAASCIIGGIGLFLPAFVRPILDSYEASKQVPQPVLSDVVASMT 60

Query: 61 GKK 64
          GKK
Sbjct: 61 GKK 63

[Close]
BLAST of PI0021137 vs. ExPASy TrEMBL
Match: A0A6J1DBQ1 (uncharacterized protein LOC111018851 OS=Momordica charantia OX=3673 GN=LOC111018851 PE=4 SV=1)

HSP 1 Score: 121.7 bits (304), Expect = 1.1e-24
Identity = 61/63 (96.83%), Postives = 62/63 (98.41%), Query Frame = 0 

Query: 1  MPVMEKLKMFVVQEPVVAASCLIGGIGLFLPAFVRPILDSYEASKQVPQPVLSDVVAGMT 60
          MPV+EKLKMFVVQEPVVAASCLIGGIGLFLPAFVRPILDSYEASKQVPQP LSDVVAGMT
Sbjct: 1  MPVVEKLKMFVVQEPVVAASCLIGGIGLFLPAFVRPILDSYEASKQVPQPALSDVVAGMT 60

Query: 61 GKK 64
          GKK
Sbjct: 61 GKK 63

[Close]
BLAST of PI0021137 vs. ExPASy TrEMBL
Match: A0A1S3CAX6 (uncharacterized protein LOC103498799 OS=Cucumis melo OX=3656 GN=LOC103498799 PE=4 SV=1)

HSP 1 Score: 121.7 bits (304), Expect = 1.1e-24
Identity = 61/63 (96.83%), Postives = 62/63 (98.41%), Query Frame = 0 

Query: 1  MPVMEKLKMFVVQEPVVAASCLIGGIGLFLPAFVRPILDSYEASKQVPQPVLSDVVAGMT 60
          MPVMEKLKMFVVQEPVVAASC+IGGIGLFLPAFVRPILDSYEASKQVPQPVLSDVVA MT
Sbjct: 1  MPVMEKLKMFVVQEPVVAASCIIGGIGLFLPAFVRPILDSYEASKQVPQPVLSDVVASMT 60

Query: 61 GKK 64
          GKK
Sbjct: 61 GKK 63

[Close]
BLAST of PI0021137 vs. ExPASy TrEMBL
Match: A0A0A0KFJ9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G103010 PE=4 SV=1)

HSP 1 Score: 120.9 bits (302), Expect = 1.9e-24
Identity = 61/63 (96.83%), Postives = 61/63 (96.83%), Query Frame = 0 

Query: 1  MPVMEKLKMFVVQEPVVAASCLIGGIGLFLPAFVRPILDSYEASKQVPQPVLSDVVAGMT 60
          MPVMEKLKMFVVQEPVVAASCLIGGIGLFLPAFVRPILDSY ASKQ PQPVLSDVVAGMT
Sbjct: 1  MPVMEKLKMFVVQEPVVAASCLIGGIGLFLPAFVRPILDSYAASKQAPQPVLSDVVAGMT 60

Query: 61 GKK 64
          GKK
Sbjct: 61 GKK 63

[Close]
BLAST of PI0021137 vs. ExPASy TrEMBL
Match: A0A068UM29 (Uncharacterized protein OS=Coffea canephora OX=49390 GN=GSCOC_T00027698001 PE=4 SV=1)

HSP 1 Score: 119.4 bits (298), Expect = 5.4e-24
Identity = 60/63 (95.24%), Postives = 62/63 (98.41%), Query Frame = 0 

Query: 1  MPVMEKLKMFVVQEPVVAASCLIGGIGLFLPAFVRPILDSYEASKQVPQPVLSDVVAGMT 60
          MPVMEKLKMFVVQEPVVAASCLIGGIGLFLPA VRPILDS+E+SKQVPQPVLSDVVAGMT
Sbjct: 1  MPVMEKLKMFVVQEPVVAASCLIGGIGLFLPAVVRPILDSFESSKQVPQPVLSDVVAGMT 60

Query: 61 GKK 64
          GKK
Sbjct: 61 GKK 63

[Close]
BLAST of PI0021137 vs. NCBI nr
Match: XP_038875998.1 (uncharacterized protein LOC120068338 [Benincasa hispida])

HSP 1 Score: 122.5 bits (306), Expect = 1.3e-24
Identity = 62/63 (98.41%), Postives = 62/63 (98.41%), Query Frame = 0 

Query: 1  MPVMEKLKMFVVQEPVVAASCLIGGIGLFLPAFVRPILDSYEASKQVPQPVLSDVVAGMT 60
          MPVMEKLKMFVVQEPVVAASCLIGGIGLFLPAFVRPILDSYEASKQVPQPVLSDVVA MT
Sbjct: 1  MPVMEKLKMFVVQEPVVAASCLIGGIGLFLPAFVRPILDSYEASKQVPQPVLSDVVASMT 60

Query: 61 GKK 64
          GKK
Sbjct: 61 GKK 63

[Close]
BLAST of PI0021137 vs. NCBI nr
Match: XP_022150787.1 (uncharacterized protein LOC111018851 [Momordica charantia])

HSP 1 Score: 121.7 bits (304), Expect = 2.3e-24
Identity = 61/63 (96.83%), Postives = 62/63 (98.41%), Query Frame = 0 

Query: 1  MPVMEKLKMFVVQEPVVAASCLIGGIGLFLPAFVRPILDSYEASKQVPQPVLSDVVAGMT 60
          MPV+EKLKMFVVQEPVVAASCLIGGIGLFLPAFVRPILDSYEASKQVPQP LSDVVAGMT
Sbjct: 1  MPVVEKLKMFVVQEPVVAASCLIGGIGLFLPAFVRPILDSYEASKQVPQPALSDVVAGMT 60

Query: 61 GKK 64
          GKK
Sbjct: 61 GKK 63

[Close]
BLAST of PI0021137 vs. NCBI nr
Match: XP_008459762.1 (PREDICTED: uncharacterized protein LOC103498799 [Cucumis melo] >ADN34227.1 fiber protein fb11 [Cucumis melo subsp. melo])

HSP 1 Score: 121.7 bits (304), Expect = 2.3e-24
Identity = 61/63 (96.83%), Postives = 62/63 (98.41%), Query Frame = 0 

Query: 1  MPVMEKLKMFVVQEPVVAASCLIGGIGLFLPAFVRPILDSYEASKQVPQPVLSDVVAGMT 60
          MPVMEKLKMFVVQEPVVAASC+IGGIGLFLPAFVRPILDSYEASKQVPQPVLSDVVA MT
Sbjct: 1  MPVMEKLKMFVVQEPVVAASCIIGGIGLFLPAFVRPILDSYEASKQVPQPVLSDVVASMT 60

Query: 61 GKK 64
          GKK
Sbjct: 61 GKK 63

[Close]
BLAST of PI0021137 vs. NCBI nr
Match: XP_004140520.1 (uncharacterized protein LOC101213029 [Cucumis sativus] >KGN46491.1 hypothetical protein Csa_004918 [Cucumis sativus])

HSP 1 Score: 120.9 bits (302), Expect = 3.8e-24
Identity = 61/63 (96.83%), Postives = 61/63 (96.83%), Query Frame = 0 

Query: 1  MPVMEKLKMFVVQEPVVAASCLIGGIGLFLPAFVRPILDSYEASKQVPQPVLSDVVAGMT 60
          MPVMEKLKMFVVQEPVVAASCLIGGIGLFLPAFVRPILDSY ASKQ PQPVLSDVVAGMT
Sbjct: 1  MPVMEKLKMFVVQEPVVAASCLIGGIGLFLPAFVRPILDSYAASKQAPQPVLSDVVAGMT 60

Query: 61 GKK 64
          GKK
Sbjct: 61 GKK 63

[Close]
BLAST of PI0021137 vs. NCBI nr
Match: XP_027115476.1 (uncharacterized protein LOC113733330 [Coffea arabica] >XP_027161062.1 uncharacterized protein LOC113762025 [Coffea eugenioides] >CDP08658.1 unnamed protein product [Coffea canephora])

HSP 1 Score: 119.4 bits (298), Expect = 1.1e-23
Identity = 60/63 (95.24%), Postives = 62/63 (98.41%), Query Frame = 0 

Query: 1  MPVMEKLKMFVVQEPVVAASCLIGGIGLFLPAFVRPILDSYEASKQVPQPVLSDVVAGMT 60
          MPVMEKLKMFVVQEPVVAASCLIGGIGLFLPA VRPILDS+E+SKQVPQPVLSDVVAGMT
Sbjct: 1  MPVMEKLKMFVVQEPVVAASCLIGGIGLFLPAVVRPILDSFESSKQVPQPVLSDVVAGMT 60

Query: 61 GKK 64
          GKK
Sbjct: 61 GKK 63

[Close]
BLAST of PI0021137 vs. TAIR 10
Match: AT2G46540.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 16 growth stages; Has 42 Blast hits to 42 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 42; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 105.1 bits (261), Expect = 2.0e-23
Identity = 52/63 (82.54%), Postives = 57/63 (90.48%), Query Frame = 0 

Query: 1  MPVMEKLKMFVVQEPVVAASCLIGGIGLFLPAFVRPILDSYEASKQVPQPVLSDVVAGMT 60
          MPVMEKL+MFV QEPVVAASCLIGG+GLFLPA VRPILDS EASKQV  P L+DV+AG+T
Sbjct: 1  MPVMEKLRMFVAQEPVVAASCLIGGVGLFLPAVVRPILDSLEASKQVKAPPLTDVIAGVT 60

Query: 61 GKK 64
          GKK
Sbjct: 61 GKK 63

The following BLAST results are available for this feature:
BLAST of PI0021137 vs.
Match NameE-valueIdentityDescription
BLAST of PI0021137 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
E5GCM81.1e-2496.83Fiber protein fb11 OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1[more]
A0A6J1DBQ11.1e-2496.83uncharacterized protein LOC111018851 OS=Momordica charantia OX=3673 GN=LOC111018... [more]
A0A1S3CAX61.1e-2496.83uncharacterized protein LOC103498799 OS=Cucumis melo OX=3656 GN=LOC103498799 PE=... [more]
A0A0A0KFJ91.9e-2496.83Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G103010 PE=4 SV=1[more]
A0A068UM295.4e-2495.24Uncharacterized protein OS=Coffea canephora OX=49390 GN=GSCOC_T00027698001 PE=4 ... [more]
BLAST of PI0021137 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_038875998.11.3e-2498.41uncharacterized protein LOC120068338 [Benincasa hispida][more]
XP_022150787.12.3e-2496.83uncharacterized protein LOC111018851 [Momordica charantia][more]
XP_008459762.12.3e-2496.83PREDICTED: uncharacterized protein LOC103498799 [Cucumis melo] >ADN34227.1 fiber... [more]
XP_004140520.13.8e-2496.83uncharacterized protein LOC101213029 [Cucumis sativus] >KGN46491.1 hypothetical ... [more]
XP_027115476.11.1e-2395.24uncharacterized protein LOC113733330 [Coffea arabica] >XP_027161062.1 uncharacte... [more]
BLAST of PI0021137 vs. TAIR 10
Match NameE-valueIdentityDescription
AT2G46540.12.0e-2382.54unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
InterPro
Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR36026:SF5SUBFAMILY NOT NAMEDcoord: 1..63
NoneNo IPR availablePANTHERPTHR36026OS05G0542100 PROTEINcoord: 1..63

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
PI0021137.1PI0021137.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane