Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAATTTGAAGAGTTGGAGAAGAGAATGGAAGAATTGAAAGCTATGAGTGAGAAGCAAGAAGCGAGAGCAAATTACTACGACACGAAGTTACACACTATAATTGTCGCTTATTTCATTTGGGAACGCGCTTTCTTCTTCGGCATCTCCAACAAAACTAATTCTCCTAATTATTTGTCCTCCCTCATCTGCCATCCCAACTGGTGGGTGATTCTTGCTCTAAGCTGTTTATACAGCCTCGTTTATATGCTGCTTTATCTCGATGCTGCGTTGATGCTCTACCGGTCTGAACAAAAACAACATTTGATTCTCAAGAAACATGCTCAACTTTATCAACAAATTTGGAAAATCAAACAAGAAGCTAACTCCTTTGATTCTTCATCCATTGAGGCTGGAAATGAGTCCAGCCATGAACTCTGGTTGGAAGAGGATTTAATACTCATAATAAACTCAAGTTCAAGCTTTAGGAGGAGTGAGGGGAGAATATTTTATATGTCCACCATTTTTTGTGCTTTGGTTTGTGTTGCTTCTCTAGAATTATATGCTTGCAAGTGTATTCTTTGCTCATAA
mRNA sequence
ATGGAATTTGAAGAGTTGGAGAAGAGAATGGAAGAATTGAAAGCTATGAGTGAGAAGCAAGAAGCGAGAGCAAATTACTACGACACGAAGTTACACACTATAATTGTCGCTTATTTCATTTGGGAACGCGCTTTCTTCTTCGGCATCTCCAACAAAACTAATTCTCCTAATTATTTGTCCTCCCTCATCTGCCATCCCAACTGGTGGGTGATTCTTGCTCTAAGCTGTTTATACAGCCTCGTTTATATGCTGCTTTATCTCGATGCTGCGTTGATGCTCTACCGGTCTGAACAAAAACAACATTTGATTCTCAAGAAACATGCTCAACTTTATCAACAAATTTGGAAAATCAAACAAGAAGCTAACTCCTTTGATTCTTCATCCATTGAGGCTGGAAATGAGTCCAGCCATGAACTCTGGTTGGAAGAGGATTTAATACTCATAATAAACTCAAGTTCAAGCTTTAGGAGGAGTGAGGGGAGAATATTTTATATGTCCACCATTTTTTGTGCTTTGGTTTGTGTTGCTTCTCTAGAATTATATGCTTGCAAGTGTATTCTTTGCTCATAA
Coding sequence (CDS)
ATGGAATTTGAAGAGTTGGAGAAGAGAATGGAAGAATTGAAAGCTATGAGTGAGAAGCAAGAAGCGAGAGCAAATTACTACGACACGAAGTTACACACTATAATTGTCGCTTATTTCATTTGGGAACGCGCTTTCTTCTTCGGCATCTCCAACAAAACTAATTCTCCTAATTATTTGTCCTCCCTCATCTGCCATCCCAACTGGTGGGTGATTCTTGCTCTAAGCTGTTTATACAGCCTCGTTTATATGCTGCTTTATCTCGATGCTGCGTTGATGCTCTACCGGTCTGAACAAAAACAACATTTGATTCTCAAGAAACATGCTCAACTTTATCAACAAATTTGGAAAATCAAACAAGAAGCTAACTCCTTTGATTCTTCATCCATTGAGGCTGGAAATGAGTCCAGCCATGAACTCTGGTTGGAAGAGGATTTAATACTCATAATAAACTCAAGTTCAAGCTTTAGGAGGAGTGAGGGGAGAATATTTTATATGTCCACCATTTTTTGTGCTTTGGTTTGTGTTGCTTCTCTAGAATTATATGCTTGCAAGTGTATTCTTTGCTCATAA
Protein sequence
MEFEELEKRMEELKAMSEKQEARANYYDTKLHTIIVAYFIWERAFFFGISNKTNSPNYLSSLICHPNWWVILALSCLYSLVYMLLYLDAALMLYRSEQKQHLILKKHAQLYQQIWKIKQEANSFDSSSIEAGNESSHELWLEEDLILIINSSSSFRRSEGRIFYMSTIFCALVCVASLELYACKCILCS
Homology
BLAST of PI0021072 vs. ExPASy TrEMBL
Match:
A0A0A0L822 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G484330 PE=4 SV=1)
HSP 1 Score: 279.6 bits (714), Expect = 9.4e-72
Identity = 156/189 (82.54%), Postives = 162/189 (85.71%), Query Frame = 0
Query: 1 MEFEELEKRMEELKAMSEKQEARANYYDTKLHTIIVAYFIWERAFFFGISNKTNSPNYLS 60
ME EELEKRMEELKAMSEKQEA ANYYDTKLHTII AYFIWERAF F ISNKTNSPNY S
Sbjct: 1 MELEELEKRMEELKAMSEKQEATANYYDTKLHTIIAAYFIWERAFCFAISNKTNSPNYFS 60
Query: 61 SLICHPNWWVILALSCLYSLVYMLLYLDAALMLYRSEQKQHLILKKHAQLYQQIWKIKQE 120
SLICH NW +ILALS LYSLVY+LLYLDAALMLYRSE KQ+LIL KHAQLY QI KIKQE
Sbjct: 61 SLICHANWRLILALSSLYSLVYILLYLDAALMLYRSELKQNLILNKHAQLYHQISKIKQE 120
Query: 121 ANSFDSSSIEAGNESSHELWLEEDLILIINSSSSFRRSEGRIFYMSTIFCALVCVASLEL 180
NS DSSS+EA EEDLIL+INSSS+FRRSE RIFYMSTIFCALVCVASLEL
Sbjct: 121 FNSIDSSSMEA----------EEDLILLINSSSTFRRSEERIFYMSTIFCALVCVASLEL 179
Query: 181 YACKCILCS 190
YACK ILCS
Sbjct: 181 YACKSILCS 179
BLAST of PI0021072 vs. ExPASy TrEMBL
Match:
A0A6J1DSQ0 (uncharacterized protein LOC111023958 OS=Momordica charantia OX=3673 GN=LOC111023958 PE=4 SV=1)
HSP 1 Score: 106.7 bits (265), Expect = 1.1e-19
Identity = 75/190 (39.47%), Postives = 110/190 (57.89%), Query Frame = 0
Query: 1 MEFEELEKRMEELKAMSEKQEARANYYDTKLHTIIVAYFIWERAFFFGISNKTNSPNYLS 60
M ELE++ EELK ++EKQE+R YY+TK+ I+ Y I+ R FFFGIS ++S N
Sbjct: 1 MALGELERKFEELKDINEKQESRVRYYETKVQNIVFGYLIFTRLFFFGISQTSSSFN--- 60
Query: 61 SLICHPNWWVILALSCLYSLVYMLLYLDAALMLYRSEQKQHLILKKHAQLYQQIWKIKQE 120
C +WWVILALS L S +Y LL+LDA ML+R++ + +I K+ +L+QQI K +
Sbjct: 61 ---C-KDWWVILALSLLCSFIYFLLFLDAVAMLFRTQYQLDIICKELKELFQQILVSKNQ 120
Query: 121 ANSFDSSSIEAGNES-SHELWLEEDLILIINSSSSFRRSEGRIFYMSTIFCALVCVASLE 180
+ S+E G S E E ++++ R GR Y+ AL+ V ++E
Sbjct: 121 DDV--GLSMETGESSGGFEFGFHEKMLML-----DHFRIVGRKVYIYFTVSALLAVTAIE 176
Query: 181 LYACKCILCS 190
LY K +LC+
Sbjct: 181 LYVSKYVLCN 176
BLAST of PI0021072 vs. ExPASy TrEMBL
Match:
A0A0A0KUT0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G562290 PE=4 SV=1)
HSP 1 Score: 101.3 bits (251), Expect = 4.6e-18
Identity = 66/189 (34.92%), Postives = 110/189 (58.20%), Query Frame = 0
Query: 4 EELEKRMEELKAMSEKQEARANYYDTKLHTIIVAYFIWERAFFFGISNKTNSPNYLSSLI 63
EE++K +EEL AM++ Q+ R Y+T L I +A+ +W R FFF +S SPN SSL+
Sbjct: 7 EEMQKVLEELNAMADTQKGRVENYETSLQNIAIAFLVWLRLFFFSLSQ--TSPN--SSLL 66
Query: 64 CHPNWWVILALSCLYSLVYMLLYLDAALMLYRSEQKQHLILKKHAQLYQQIWKIKQEANS 123
+WW++ AL+C + +Y+LL++ +LML R+E++ H+I ++ QL+QQIW ++ +
Sbjct: 67 HCKHWWLLFALTCFSAFLYILLFIHNSLMLSRTERQLHVISRQQIQLHQQIWMLRLQ--- 126
Query: 124 FDSSSIEAGNESSHEL-WLEEDLIL--IINSSSSFRRSEGRIFYMSTIFCALVCVASLEL 183
EL + E +I+ IIN + R Y++ I C + + +LEL
Sbjct: 127 --------------ELPQMIEPIIMDHIINGEMGRTSTFERKLYINCILCGFIGIVALEL 174
Query: 184 YACKCILCS 190
YA + +LC+
Sbjct: 187 YASRSLLCN 174
BLAST of PI0021072 vs. ExPASy TrEMBL
Match:
A0A6J1DS87 (uncharacterized protein LOC111023927 OS=Momordica charantia OX=3673 GN=LOC111023927 PE=4 SV=1)
HSP 1 Score: 97.4 bits (241), Expect = 6.6e-17
Identity = 68/188 (36.17%), Postives = 106/188 (56.38%), Query Frame = 0
Query: 1 MEFEELEKRMEELKAMSEKQEARANYYDTKLHTIIVAYFIWERAFFFGISNKTNSPNYLS 60
MEF EL++ E LK + EKQE+R Y++++ I +AY IW R FFF IS + S
Sbjct: 1 MEFGELKRNFEALKDLVEKQESRVQYHESRAQNITMAYLIWGRLFFFAISQTS------S 60
Query: 61 SLICHPNWWVILALSCLYSLVYMLLYLDAALMLYRSEQKQHLILKKHAQLYQQIWKIKQE 120
SL+ +WW++L LS + VY L +L+A MLYR + + +I K+ A++ QQI + +
Sbjct: 61 SLLKCIDWWMVLGLSVSCAFVYFLFFLEAVTMLYRVQHQMDIICKEQAEICQQILVARSQ 120
Query: 121 ANSFDSSSIEAGNESSHELWLEEDLILIINSSSSFRRSEGRIFYMSTIFCALVCVASLEL 180
+ D ++EAG+ S + + + +FR E R FY+ AL+ V ++EL
Sbjct: 121 LDDVD-LAMEAGDSSD---GFQFSFHVKLLEYGAFRIVE-RKFYICATVSALLAVTAIEL 177
Query: 181 YACKCILC 189
YAC + C
Sbjct: 181 YACSWLYC 177
BLAST of PI0021072 vs. ExPASy TrEMBL
Match:
A0A5A7TMJ1 (WD repeat-containing protein 91-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold376G00790 PE=4 SV=1)
HSP 1 Score: 96.3 bits (238), Expect = 1.5e-16
Identity = 68/187 (36.36%), Postives = 104/187 (55.61%), Query Frame = 0
Query: 5 ELEKRMEELKAMSEKQEARANYYDTKLHTIIVAYFIWERAFFFGISNKTNSPNYLSSLIC 64
+L + LK +++ QE Y +TKL +++ Y W R FFFG+S S C
Sbjct: 49 DLRRNFVLLKDINDNQETSLRYCETKLQNVVLGYLSWGRLFFFGVS---------FSFKC 108
Query: 65 HPNWWVILALSCLYSLVYMLLYLDAALMLYRSEQKQHLILKKHAQLYQQIWKIKQEANSF 124
+WWVILAL+ Y+ Y LL++DA +ML R+ + +I K+ A++ QQI + + N
Sbjct: 109 -KDWWVILALTLFYTFFYFLLFMDAVIMLSRTHDQLDIIRKELAEICQQILVAQNQDNV- 168
Query: 125 DSSSIEAGNES-SHELWLEEDLILIINSSSSFRRSE-GRIFYMSTIFCALVCVASLELYA 184
S+EAG +S EL E + ++ FR E GR Y+ I C L+ + ++ELYA
Sbjct: 169 -GLSMEAGEDSDGFELSFHERMFML----DQFRVVETGRKVYIYFIVCPLLAITAIELYA 219
Query: 185 CKCILCS 190
CKC+LC+
Sbjct: 229 CKCLLCN 219
BLAST of PI0021072 vs. NCBI nr
Match:
KAE8650729.1 (hypothetical protein Csa_023412 [Cucumis sativus])
HSP 1 Score: 279.6 bits (714), Expect = 1.9e-71
Identity = 156/189 (82.54%), Postives = 162/189 (85.71%), Query Frame = 0
Query: 1 MEFEELEKRMEELKAMSEKQEARANYYDTKLHTIIVAYFIWERAFFFGISNKTNSPNYLS 60
ME EELEKRMEELKAMSEKQEA ANYYDTKLHTII AYFIWERAF F ISNKTNSPNY S
Sbjct: 5 MELEELEKRMEELKAMSEKQEATANYYDTKLHTIIAAYFIWERAFCFAISNKTNSPNYFS 64
Query: 61 SLICHPNWWVILALSCLYSLVYMLLYLDAALMLYRSEQKQHLILKKHAQLYQQIWKIKQE 120
SLICH NW +ILALS LYSLVY+LLYLDAALMLYRSE KQ+LIL KHAQLY QI KIKQE
Sbjct: 65 SLICHANWRLILALSSLYSLVYILLYLDAALMLYRSELKQNLILNKHAQLYHQISKIKQE 124
Query: 121 ANSFDSSSIEAGNESSHELWLEEDLILIINSSSSFRRSEGRIFYMSTIFCALVCVASLEL 180
NS DSSS+EA EEDLIL+INSSS+FRRSE RIFYMSTIFCALVCVASLEL
Sbjct: 125 FNSIDSSSMEA----------EEDLILLINSSSTFRRSEERIFYMSTIFCALVCVASLEL 183
Query: 181 YACKCILCS 190
YACK ILCS
Sbjct: 185 YACKSILCS 183
BLAST of PI0021072 vs. NCBI nr
Match:
KAG6579352.1 (hypothetical protein SDJN03_23800, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 205.3 bits (521), Expect = 4.7e-49
Identity = 117/190 (61.58%), Postives = 145/190 (76.32%), Query Frame = 0
Query: 1 MEFEELEKRMEELKAMSEKQEARANYYDTKLHTIIVAYFIWERAFFFGISNKTNSPNYLS 60
ME EEL+K MEE++ M EK EA+ NYYDTKLHTIIVAYF+WER FFFGIS KT P+ +S
Sbjct: 1 MEVEELKKMMEEVQGMGEKVEAKVNYYDTKLHTIIVAYFVWERVFFFGISKKT-FPSTIS 60
Query: 61 SLICHPNWWVILALSCLYSLVYMLLYLDAALMLYRSEQKQHLILKKHAQLYQQIWKIKQE 120
+L C+ NWWVILALSC S VY+LL+ DAALMLYR E + HLIL+KHAQL + + IK+E
Sbjct: 61 TLSCNGNWWVILALSCSCSFVYVLLFFDAALMLYRHENQLHLILQKHAQLCRHLLAIKEE 120
Query: 121 ANSFDSSSIEAGNESSHELWLEEDLILIINSSSSFRRSE--GRIFYMSTIFCALVCVASL 180
+S +EAG+++SH L LEE+L+L INS+S FRR R ++ TIFCA + VASL
Sbjct: 121 QADTKASLMEAGDQASHGLSLEEELML-INSTSPFRRRRPWERKVHVYTIFCAFIGVASL 180
Query: 181 ELYACKCILC 189
ELYACK +LC
Sbjct: 181 ELYACKAVLC 188
BLAST of PI0021072 vs. NCBI nr
Match:
KAG6579345.1 (hypothetical protein SDJN03_23793, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 198.7 bits (504), Expect = 4.4e-47
Identity = 114/187 (60.96%), Postives = 139/187 (74.33%), Query Frame = 0
Query: 4 EELEKRMEELKAMSEKQEARANYYDTKLHTIIVAYFIWERAFFFGISNKTNSPNYLSSLI 63
EEL+K MEE++ M E EA+ NYYDTKLH IIVAYF+WER FFFGIS KT P +S+L
Sbjct: 8 EELKKMMEEVQGMGENVEAKVNYYDTKLHNIIVAYFVWERVFFFGISKKTFPPT-ISTLS 67
Query: 64 CHPNWWVILALSCLYSLVYMLLYLDAALMLYRSEQKQHLILKKHAQLYQQIWKIKQEANS 123
C+ NWWVILALS S VY+LL+ D ALMLYR E + HLIL+KHAQL + + IK+E
Sbjct: 68 CNGNWWVILALSSSCSFVYVLLFFDTALMLYRHENQLHLILQKHAQLCRHLLAIKEEQAD 127
Query: 124 FDSSSIEAGNESSHELWLEEDLILIINSSSSFRRSE--GRIFYMSTIFCALVCVASLELY 183
+S +EAG+E+SH L LEE+L+L INS+S FRR R Y+ TIFCAL+ VASLELY
Sbjct: 128 IKASLMEAGDEASHGLSLEEELML-INSTSPFRRRRPWERKVYVYTIFCALIGVASLELY 187
Query: 184 ACKCILC 189
ACK +LC
Sbjct: 188 ACKAVLC 192
BLAST of PI0021072 vs. NCBI nr
Match:
KAG6579344.1 (hypothetical protein SDJN03_23792, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 189.9 bits (481), Expect = 2.0e-44
Identity = 113/195 (57.95%), Postives = 142/195 (72.82%), Query Frame = 0
Query: 1 MEFEE-LEKRMEELKAMSEKQEARANYYDTKLHTIIVAYFIWERA-----FFFGISNKTN 60
ME EE +EKRMEE+K M EK E R NYYDTKLH IIVAY +WER FFFG+SN TN
Sbjct: 1 MEIEEQMEKRMEEVKGMWEKVEGRVNYYDTKLHAIIVAYLVWERVFFFFFFFFGVSN-TN 60
Query: 61 SPNYLSSLICHPNWWVILALSCLYSLVYMLLYLDAALMLYRSEQKQHLILKKHAQLYQQI 120
+ +S+L C+ WWVI+ALSCL S VYMLL++DAALMLY + + +LIL+ H QLY+Q+
Sbjct: 61 FASNISTLSCNGKWWVIVALSCLCSFVYMLLFVDAALMLYPHQNQLNLILQTHHQLYRQL 120
Query: 121 WKIKQEANSFDSSSIEAGNESSHELWLEEDLILIINSSSSFRRSEGRIFYMSTIFCALVC 180
IK S +EAG+E+SH L LEE+L+LI ++++ RR GR FY+ TIFCAL+
Sbjct: 121 LAIK-------DSLMEAGDEASHGLSLEEELMLINSNAAYRRRPWGRKFYVYTIFCALID 180
Query: 181 VASLELYACKCILCS 190
VASLELYAC +LCS
Sbjct: 181 VASLELYACNSVLCS 187
BLAST of PI0021072 vs. NCBI nr
Match:
XP_022157182.1 (uncharacterized protein LOC111023958 [Momordica charantia] >XP_022157183.1 uncharacterized protein LOC111023958 [Momordica charantia])
HSP 1 Score: 106.7 bits (265), Expect = 2.3e-19
Identity = 75/190 (39.47%), Postives = 110/190 (57.89%), Query Frame = 0
Query: 1 MEFEELEKRMEELKAMSEKQEARANYYDTKLHTIIVAYFIWERAFFFGISNKTNSPNYLS 60
M ELE++ EELK ++EKQE+R YY+TK+ I+ Y I+ R FFFGIS ++S N
Sbjct: 1 MALGELERKFEELKDINEKQESRVRYYETKVQNIVFGYLIFTRLFFFGISQTSSSFN--- 60
Query: 61 SLICHPNWWVILALSCLYSLVYMLLYLDAALMLYRSEQKQHLILKKHAQLYQQIWKIKQE 120
C +WWVILALS L S +Y LL+LDA ML+R++ + +I K+ +L+QQI K +
Sbjct: 61 ---C-KDWWVILALSLLCSFIYFLLFLDAVAMLFRTQYQLDIICKELKELFQQILVSKNQ 120
Query: 121 ANSFDSSSIEAGNES-SHELWLEEDLILIINSSSSFRRSEGRIFYMSTIFCALVCVASLE 180
+ S+E G S E E ++++ R GR Y+ AL+ V ++E
Sbjct: 121 DDV--GLSMETGESSGGFEFGFHEKMLML-----DHFRIVGRKVYIYFTVSALLAVTAIE 176
Query: 181 LYACKCILCS 190
LY K +LC+
Sbjct: 181 LYVSKYVLCN 176
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A0A0L822 | 9.4e-72 | 82.54 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G484330 PE=4 SV=1 | [more] |
A0A6J1DSQ0 | 1.1e-19 | 39.47 | uncharacterized protein LOC111023958 OS=Momordica charantia OX=3673 GN=LOC111023... | [more] |
A0A0A0KUT0 | 4.6e-18 | 34.92 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G562290 PE=4 SV=1 | [more] |
A0A6J1DS87 | 6.6e-17 | 36.17 | uncharacterized protein LOC111023927 OS=Momordica charantia OX=3673 GN=LOC111023... | [more] |
A0A5A7TMJ1 | 1.5e-16 | 36.36 | WD repeat-containing protein 91-like protein OS=Cucumis melo var. makuwa OX=1194... | [more] |
Match Name | E-value | Identity | Description | |
KAE8650729.1 | 1.9e-71 | 82.54 | hypothetical protein Csa_023412 [Cucumis sativus] | [more] |
KAG6579352.1 | 4.7e-49 | 61.58 | hypothetical protein SDJN03_23800, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
KAG6579345.1 | 4.4e-47 | 60.96 | hypothetical protein SDJN03_23793, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
KAG6579344.1 | 2.0e-44 | 57.95 | hypothetical protein SDJN03_23792, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
XP_022157182.1 | 2.3e-19 | 39.47 | uncharacterized protein LOC111023958 [Momordica charantia] >XP_022157183.1 uncha... | [more] |
Match Name | E-value | Identity | Description | |