PI0020990 (gene) Melon (PI 482460) v1

Overview


Name	PI0020990
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	translocator protein homolog
Location	chr06: 5024624 .. 5025368 (+)
RNA-Seq Expression	PI0020990
Synteny	PI0020990

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTCAATCTTCCTTTAATATCTCAAAATTCATTCCCATTTTTCGCCCTAATTTTTCCAATTCCTCTTTTCATAATCTCTCAATCCTATCTCTCTCTCAAATCAACAATGCCTTCTTCCAATCCGCCCTTCAAATCCCGACCAGAATCCAAATACACCAAGGCCAAGAGAGCTCTCCGTTCTCTCGCCGTCTCCGTCGCCATTCCTGTTTTTATTACAATCGCCGTTATCTTCCTCTTCGGCCGCTCCTCTCGCCATTTCCCCAACCTTAACCGTCCGATTTGGATAGCGCCGCTCTGGCTCCTCCATCTTTCCTCCATTGGCTCCTCCTTCCTAATCGGCCTCGCATCTTGGCTTGTTTGGGCGGACGGTGGTTTCCATGGCGGTTCCAATGCTCTTCCGCTCTACATCGCGCATCTTTCTCTCAGCGTCGTTTGGAATCCTCTGGTGCTTGTGATTCGGTCTGTTGTGATTGCATTTTTGTTCTGTGTTTTGGATTTCGTGACTCTGTTTGCTTGTTATCGGACGTTCAAGCGAGTTAATCCTTTCGCTAAGGATCTGATGAAGCCTTGTTTGGCTTGGACTGCGTATCTCTCTGCTGTTACTTATGTGTTTATTGATCTTTGATTGAGGTTTTTGATCATTTGATGATTTTTGAAAAGATTTGTTTATCACATTGAAGTACTAGGATGTTGTAGAACTTTTTATCAGTACAAAGAAATTGTTAGGAGATTGAAAGGAAAGTTTG

mRNA sequence

TTCAATCTTCCTTTAATATCTCAAAATTCATTCCCATTTTTCGCCCTAATTTTTCCAATTCCTCTTTTCATAATCTCTCAATCCTATCTCTCTCTCAAATCAACAATGCCTTCTTCCAATCCGCCCTTCAAATCCCGACCAGAATCCAAATACACCAAGGCCAAGAGAGCTCTCCGTTCTCTCGCCGTCTCCGTCGCCATTCCTGTTTTTATTACAATCGCCGTTATCTTCCTCTTCGGCCGCTCCTCTCGCCATTTCCCCAACCTTAACCGTCCGATTTGGATAGCGCCGCTCTGGCTCCTCCATCTTTCCTCCATTGGCTCCTCCTTCCTAATCGGCCTCGCATCTTGGCTTGTTTGGGCGGACGGTGGTTTCCATGGCGGTTCCAATGCTCTTCCGCTCTACATCGCGCATCTTTCTCTCAGCGTCGTTTGGAATCCTCTGGTGCTTGTGATTCGGTCTGTTGTGATTGCATTTTTGTTCTGTGTTTTGGATTTCGTGACTCTGTTTGCTTGTTATCGGACGTTCAAGCGAGTTAATCCTTTCGCTAAGGATCTGATGAAGCCTTGTTTGGCTTGGACTGCGTATCTCTCTGCTGTTACTTATGTGTTTATTGATCTTTGATTGAGGTTTTTGATCATTTGATGATTTTTGAAAAGATTTGTTTATCACATTGAAGTACTAGGATGTTGTAGAACTTTTTATCAGTACAAAGAAATTGTTAGGAGATTGAAAGGAAAGTTTG

Coding sequence (CDS)

ATGCCTTCTTCCAATCCGCCCTTCAAATCCCGACCAGAATCCAAATACACCAAGGCCAAGAGAGCTCTCCGTTCTCTCGCCGTCTCCGTCGCCATTCCTGTTTTTATTACAATCGCCGTTATCTTCCTCTTCGGCCGCTCCTCTCGCCATTTCCCCAACCTTAACCGTCCGATTTGGATAGCGCCGCTCTGGCTCCTCCATCTTTCCTCCATTGGCTCCTCCTTCCTAATCGGCCTCGCATCTTGGCTTGTTTGGGCGGACGGTGGTTTCCATGGCGGTTCCAATGCTCTTCCGCTCTACATCGCGCATCTTTCTCTCAGCGTCGTTTGGAATCCTCTGGTGCTTGTGATTCGGTCTGTTGTGATTGCATTTTTGTTCTGTGTTTTGGATTTCGTGACTCTGTTTGCTTGTTATCGGACGTTCAAGCGAGTTAATCCTTTCGCTAAGGATCTGATGAAGCCTTGTTTGGCTTGGACTGCGTATCTCTCTGCTGTTACTTATGTGTTTATTGATCTTTGA

Protein sequence

MPSSNPPFKSRPESKYTKAKRALRSLAVSVAIPVFITIAVIFLFGRSSRHFPNLNRPIWIAPLWLLHLSSIGSSFLIGLASWLVWADGGFHGGSNALPLYIAHLSLSVVWNPLVLVIRSVVIAFLFCVLDFVTLFACYRTFKRVNPFAKDLMKPCLAWTAYLSAVTYVFIDL

Homology

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BLAST of PI0020990 vs. ExPASy Swiss-Prot
Match: O82245 (Translocator protein homolog OS=Arabidopsis thaliana OX=3702 GN=TSPO PE=1 SV=1)

HSP 1 Score: 134.8 bits (338), Expect = 9.2e-31
Identity = 68/157 (43.31%), Postives = 94/157 (59.87%), Query Frame = 0


Query: 9   KSRPESKYTKAKRALRSLAVSVAIPVFITIAVIFLFGRSSRHFPNLNRPIWIAPLWLLHL 68
           K + + K   AKR L+SL V+VA PV +T+   +  G S  +        WI PLWLLH 
Sbjct: 33  KGKRDQKRAMAKRGLKSLTVAVAAPVLVTLFATYFLGTSDGYGNRAKSSSWIPPLWLLHT 92

Query: 69  SSIGSSFLIGLASWLVWADGGFHGGSNALPLYIAHLSLSVVWNPLVLVIRSVVIAFLFCV 128
           + + SS L+GLA+WLVW DGGFH   NAL LY+A   L +VW+P+   + S V      +
Sbjct: 93  TCLASSGLMGLAAWLVWVDGGFHKKPNALYLYLAQFLLCLVWDPVTFRVGSGVAGLAVWL 152

Query: 129 LDFVTLFACYRTFKRVNPFAKDLMKPCLAWTAYLSAV 166
                LF CY+ F  ++P A +L+KPCLAW A+++AV
Sbjct: 153 GQSAALFGCYKAFNEISPVAGNLVKPCLAWAAFVAAV 189

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BLAST of PI0020990 vs. ExPASy Swiss-Prot
Match: Q9GMC9 (Translocator protein OS=Ovis aries OX=9940 GN=TSPO PE=1 SV=1)

HSP 1 Score: 50.8 bits (120), Expect = 1.7e-05
Identity = 38/128 (29.69%), Postives = 62/128 (48.44%), Query Frame = 0


Query: 42  FLFGRSSRHFPNLNRPIWIAPLWLLHLSSIGSSFLIGLASWLVWAD-GGFHGGSNA-LPL 101
           ++ G   R + +L +P W  P W+L          +G  S+L+W + GGF   +   L L
Sbjct: 25  YIRGEGFRWYASLQKPPWHPPRWILAPIWGTLYSAMGYGSYLIWKELGGFSKEAVVPLGL 84

Query: 102 YIAHLSLSVVWNPLVLVIRSVVIAFLFCVLDFVTLFACYRTFKRVNPFAKDLMKPCLAWT 161
           Y   L+L+  W PL    R +  AF+  +L      A    +++V+P A  L+ P LAW 
Sbjct: 85  YAGQLALNWAWPPLFFGARQMGWAFVDLLLTGGMAAATAMAWRQVSPPAACLLYPYLAWL 144

Query: 162 AYLSAVTY 168
           A+ + + Y
Sbjct: 145 AFAAMLNY 152

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BLAST of PI0020990 vs. ExPASy Swiss-Prot
Match: P30536 (Translocator protein OS=Homo sapiens OX=9606 GN=TSPO PE=1 SV=3)

HSP 1 Score: 48.5 bits (114), Expect = 8.7e-05
Identity = 38/128 (29.69%), Postives = 58/128 (45.31%), Query Frame = 0


Query: 42  FLFGRSSRHFPNLNRPIWIAPLWLLHLSSIGSSFLIGLASWLVWAD-GGF-HGGSNALPL 101
           F+ G   R +  L +P W  P W+L          +G  S+LVW + GGF       L L
Sbjct: 25  FVHGEGLRWYAGLQKPSWHPPHWVLGPVWGTLYSAMGYGSYLVWKELGGFTEKAVVPLGL 84

Query: 102 YIAHLSLSVVWNPLVLVIRSVVIAFLFCVLDFVTLFACYRTFKRVNPFAKDLMKPCLAWT 161
           Y   L+L+  W P+    R +  A +  +L      A    + +V+P A  L+ P LAW 
Sbjct: 85  YTGQLALNWAWPPIFFGARQMGWALVDLLLVSGAAAATTVAWYQVSPLAARLLYPYLAWL 144

Query: 162 AYLSAVTY 168
           A+ + + Y
Sbjct: 145 AFTTTLNY 152

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BLAST of PI0020990 vs. ExPASy Swiss-Prot
Match: P50637 (Translocator protein OS=Mus musculus OX=10090 GN=Tspo PE=1 SV=1)

HSP 1 Score: 47.8 bits (112), Expect = 1.5e-04
Identity = 38/128 (29.69%), Postives = 57/128 (44.53%), Query Frame = 0


Query: 42  FLFGRSSRHFPNLNRPIWIAPLWLLHLSSIGSSFLIGLASWLVWAD-GGF-HGGSNALPL 101
           F+ G   R + +L +P W  P W L          +G  S++VW + GGF       L L
Sbjct: 25  FVRGEGLRWYASLQKPSWHPPRWTLAPIWGTLYSAMGYGSYIVWKELGGFTEDAMVPLGL 84

Query: 102 YIAHLSLSVVWNPLVLVIRSVVIAFLFCVLDFVTLFACYRTFKRVNPFAKDLMKPCLAWT 161
           Y   L+L+  W P+    R +  A    +L      A    + RV+P A  L+ P LAW 
Sbjct: 85  YTGQLALNWAWPPIFFGARQMGWALADLLLVSGVATATTLAWHRVSPPAARLLYPYLAWL 144

Query: 162 AYLSAVTY 168
           A+ + + Y
Sbjct: 145 AFATVLNY 152

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BLAST of PI0020990 vs. ExPASy Swiss-Prot
Match: E2RDM9 (Translocator protein 2 OS=Canis lupus familiaris OX=9615 GN=TSPO2 PE=1 SV=1)

HSP 1 Score: 47.0 bits (110), Expect = 2.5e-04
Identity = 44/145 (30.34%), Postives = 68/145 (46.90%), Query Frame = 0


Query: 27  AVSVAIPVFITIAVIFLF-GRSSRHFPNLNRPIWIAPLWLLHLSSIGSSFLIGLASWLVW 86
           A+ VA+P    I V  L   R  R +    +P W  P  +L    I   F++G AS+LVW
Sbjct: 6   AIFVALPHLGPILVSLLTRHRMIRWYDIPKKPPWCPPHKVLLAGWITIYFVMGYASYLVW 65

Query: 87  AD-GGFHGGSNALPLYIAHLSLSVVWNPLVLVIRSVV--IAFLFCVLDFVTLFACYRTFK 146
            D GG  G   ALPL +  + L+V W  L+    +    +A L  +L +  + +    + 
Sbjct: 66  KDLGGGFGRPLALPLGLYAVQLAVSWAVLIFFFAAHAHGLALLHMLLLYGLVVSTALIWH 125

Query: 147 RVNPFAKDLMKPCLAWTAYLSAVTY 168
            +N  A  L+ P LAW    +++ Y
Sbjct: 126 PINKLAAVLLLPYLAWLTVTASIAY 150

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BLAST of PI0020990 vs. ExPASy TrEMBL
Match: A0A5D3CWC4 (Translocator protein-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold209G001010 PE=3 SV=1)

HSP 1 Score: 320.9 bits (821), Expect = 3.3e-84
Identity = 161/172 (93.60%), Postives = 166/172 (96.51%), Query Frame = 0


Query: 1   MPSSNPPFKSRPESKYTKAKRALRSLAVSVAIPVFITIAVIFLFGRSSRHFPNLNRPIWI 60
           MPSSNPPFKSRPESKYTKAKRALRSLAVSVAIPV +TIAVIFLFGRSSRHFPN NRPIWI
Sbjct: 1   MPSSNPPFKSRPESKYTKAKRALRSLAVSVAIPVSLTIAVIFLFGRSSRHFPNRNRPIWI 60

Query: 61  APLWLLHLSSIGSSFLIGLASWLVWADGGFHGGSNALPLYIAHLSLSVVWNPLVLVIRSV 120
            PLWLL LSSIGSSFL+GLA+WLVWADGGFHGGSNALPLYIAHLSLSVVW+PLVLVIRSV
Sbjct: 61  GPLWLLQLSSIGSSFLVGLAAWLVWADGGFHGGSNALPLYIAHLSLSVVWSPLVLVIRSV 120

Query: 121 VIAFLFCVLDFVTLFACYRTFKRVNPFAKDLMKPCLAWTAYLSAVTYVFIDL 173
           VIAFLFCVLDFVTLFACYR F+RVNPFAKDLMKPCLAWTAYLSAVTYVFI L
Sbjct: 121 VIAFLFCVLDFVTLFACYRAFERVNPFAKDLMKPCLAWTAYLSAVTYVFIHL 172

[Close]

BLAST of PI0020990 vs. ExPASy TrEMBL
Match: A0A1S4DTF2 (translocator protein homolog OS=Cucumis melo OX=3656 GN=LOC107990392 PE=3 SV=1)

HSP 1 Score: 320.9 bits (821), Expect = 3.3e-84
Identity = 161/172 (93.60%), Postives = 166/172 (96.51%), Query Frame = 0


Query: 1   MPSSNPPFKSRPESKYTKAKRALRSLAVSVAIPVFITIAVIFLFGRSSRHFPNLNRPIWI 60
           MPSSNPPFKSRPESKYTKAKRALRSLAVSVAIPV +TIAVIFLFGRSSRHFPN NRPIWI
Sbjct: 1   MPSSNPPFKSRPESKYTKAKRALRSLAVSVAIPVSLTIAVIFLFGRSSRHFPNRNRPIWI 60

Query: 61  APLWLLHLSSIGSSFLIGLASWLVWADGGFHGGSNALPLYIAHLSLSVVWNPLVLVIRSV 120
            PLWLL LSSIGSSFL+GLA+WLVWADGGFHGGSNALPLYIAHLSLSVVW+PLVLVIRSV
Sbjct: 61  GPLWLLQLSSIGSSFLVGLAAWLVWADGGFHGGSNALPLYIAHLSLSVVWSPLVLVIRSV 120

Query: 121 VIAFLFCVLDFVTLFACYRTFKRVNPFAKDLMKPCLAWTAYLSAVTYVFIDL 173
           VIAFLFCVLDFVTLFACYR F+RVNPFAKDLMKPCLAWTAYLSAVTYVFI L
Sbjct: 121 VIAFLFCVLDFVTLFACYRAFERVNPFAKDLMKPCLAWTAYLSAVTYVFIHL 172

[Close]

BLAST of PI0020990 vs. ExPASy TrEMBL
Match: A0A0A0L583 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G154290 PE=3 SV=1)

HSP 1 Score: 317.8 bits (813), Expect = 2.8e-83
Identity = 159/172 (92.44%), Postives = 164/172 (95.35%), Query Frame = 0


Query: 1   MPSSNPPFKSRPESKYTKAKRALRSLAVSVAIPVFITIAVIFLFGRSSRHFPNLNRPIWI 60
           MPSSNPPFKSRPESKYTKAKRALRSLAVSVAIPV +TIA IFLFGRSSRH+PN NRPIWI
Sbjct: 1   MPSSNPPFKSRPESKYTKAKRALRSLAVSVAIPVSLTIAAIFLFGRSSRHYPNRNRPIWI 60

Query: 61  APLWLLHLSSIGSSFLIGLASWLVWADGGFHGGSNALPLYIAHLSLSVVWNPLVLVIRSV 120
            PLWL+ LSSIGSSFL+GLA+WLVWADGGFHGGSNALPLYIAHLSLSVVWNPLVLVIRSV
Sbjct: 61  GPLWLIQLSSIGSSFLVGLAAWLVWADGGFHGGSNALPLYIAHLSLSVVWNPLVLVIRSV 120

Query: 121 VIAFLFCVLDFVTLFACYRTFKRVNPFAKDLMKPCLAWTAYLSAVTYVFIDL 173
           VIAFLFCVLD VTLFACY  FKRVNPFAKDLMKPCLAWTAYLSAVTYVFIDL
Sbjct: 121 VIAFLFCVLDCVTLFACYLAFKRVNPFAKDLMKPCLAWTAYLSAVTYVFIDL 172

[Close]

BLAST of PI0020990 vs. ExPASy TrEMBL
Match: A0A6J1ICB9 (translocator protein homolog OS=Cucurbita maxima OX=3661 GN=LOC111474208 PE=3 SV=1)

HSP 1 Score: 311.2 bits (796), Expect = 2.7e-81
Identity = 154/170 (90.59%), Postives = 165/170 (97.06%), Query Frame = 0


Query: 3   SSNPPFKSRPESKYTKAKRALRSLAVSVAIPVFITIAVIFLFGRSSRHFPNLNRPIWIAP 62
           SS+PPFKSRPESKYTKAKRALRSLAVSVAIP+ +TIAVIFLFGRSSRHFPN NRPIW+AP
Sbjct: 2   SSSPPFKSRPESKYTKAKRALRSLAVSVAIPLTLTIAVIFLFGRSSRHFPNRNRPIWVAP 61

Query: 63  LWLLHLSSIGSSFLIGLASWLVWADGGFHGGSNALPLYIAHLSLSVVWNPLVLVIRSVVI 122
           LWLLHLSSI SSFLIGLA+WLVWADGGFH GSNALPLYIAHLSLSVVWNPLVLVIR++++
Sbjct: 62  LWLLHLSSISSSFLIGLAAWLVWADGGFHCGSNALPLYIAHLSLSVVWNPLVLVIRALLL 121

Query: 123 AFLFCVLDFVTLFACYRTFKRVNPFAKDLMKPCLAWTAYLSAVTYVFIDL 173
           AFLFCVLDFVTL+ACYRTFKRVNPFAKDL+KPCLAWTAYL AVTYVFIDL
Sbjct: 122 AFLFCVLDFVTLYACYRTFKRVNPFAKDLIKPCLAWTAYLCAVTYVFIDL 171

[Close]

BLAST of PI0020990 vs. ExPASy TrEMBL
Match: A0A6J1FZS9 (translocator protein homolog OS=Cucurbita moschata OX=3662 GN=LOC111449384 PE=3 SV=1)

HSP 1 Score: 307.4 bits (786), Expect = 3.8e-80
Identity = 153/170 (90.00%), Postives = 163/170 (95.88%), Query Frame = 0


Query: 3   SSNPPFKSRPESKYTKAKRALRSLAVSVAIPVFITIAVIFLFGRSSRHFPNLNRPIWIAP 62
           SS+PPFKSRPESKYTKAKRALRSLAVSVAIP+ +TIAVIFLFGRSSRHFPN NRPIW+AP
Sbjct: 57  SSSPPFKSRPESKYTKAKRALRSLAVSVAIPLTLTIAVIFLFGRSSRHFPNRNRPIWVAP 116

Query: 63  LWLLHLSSIGSSFLIGLASWLVWADGGFHGGSNALPLYIAHLSLSVVWNPLVLVIRSVVI 122
           LWLLHLSSI SSFLIGLA+WLVWADGGFH GSNALPLYIAHLSLSVVWNPLVLVIR+ ++
Sbjct: 117 LWLLHLSSISSSFLIGLAAWLVWADGGFHCGSNALPLYIAHLSLSVVWNPLVLVIRARLL 176

Query: 123 AFLFCVLDFVTLFACYRTFKRVNPFAKDLMKPCLAWTAYLSAVTYVFIDL 173
           AFLFCVLD VTL+ACYRTFKRVNPFAKDL+KPCLAWTAYL AVTYVFIDL
Sbjct: 177 AFLFCVLDLVTLYACYRTFKRVNPFAKDLIKPCLAWTAYLCAVTYVFIDL 226

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BLAST of PI0020990 vs. NCBI nr
Match: XP_038878873.1 (translocator protein homolog [Benincasa hispida])

HSP 1 Score: 324.7 bits (831), Expect = 4.8e-85
Identity = 162/172 (94.19%), Postives = 168/172 (97.67%), Query Frame = 0


Query: 1   MPSSNPPFKSRPESKYTKAKRALRSLAVSVAIPVFITIAVIFLFGRSSRHFPNLNRPIWI 60
           M SSNPPFKSRPESKYTKAKRALRSLAVSVAIP+ +TIAVIFLFGRS+RHFPN NRPIWI
Sbjct: 1   MSSSNPPFKSRPESKYTKAKRALRSLAVSVAIPLSLTIAVIFLFGRSARHFPNRNRPIWI 60

Query: 61  APLWLLHLSSIGSSFLIGLASWLVWADGGFHGGSNALPLYIAHLSLSVVWNPLVLVIRSV 120
            PLWLLHLSSIGSSFLIGLA+WLVWADGGFHGGSNALPLYIAHLSLSVVWNPLVLVIRSV
Sbjct: 61  GPLWLLHLSSIGSSFLIGLAAWLVWADGGFHGGSNALPLYIAHLSLSVVWNPLVLVIRSV 120

Query: 121 VIAFLFCVLDFVTLFACYRTFKRVNPFAKDLMKPCLAWTAYLSAVTYVFIDL 173
           V+AFLFCVLDFVTLFACYRTFKRVNPFAKDL+KPCLAWTAYLSAVTYVFIDL
Sbjct: 121 VLAFLFCVLDFVTLFACYRTFKRVNPFAKDLIKPCLAWTAYLSAVTYVFIDL 172

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BLAST of PI0020990 vs. NCBI nr
Match: XP_016898980.1 (PREDICTED: translocator protein homolog [Cucumis melo] >KAA0049494.1 translocator protein-like protein [Cucumis melo var. makuwa] >TYK16173.1 translocator protein-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 320.9 bits (821), Expect = 6.9e-84
Identity = 161/172 (93.60%), Postives = 166/172 (96.51%), Query Frame = 0


Query: 1   MPSSNPPFKSRPESKYTKAKRALRSLAVSVAIPVFITIAVIFLFGRSSRHFPNLNRPIWI 60
           MPSSNPPFKSRPESKYTKAKRALRSLAVSVAIPV +TIAVIFLFGRSSRHFPN NRPIWI
Sbjct: 1   MPSSNPPFKSRPESKYTKAKRALRSLAVSVAIPVSLTIAVIFLFGRSSRHFPNRNRPIWI 60

Query: 61  APLWLLHLSSIGSSFLIGLASWLVWADGGFHGGSNALPLYIAHLSLSVVWNPLVLVIRSV 120
            PLWLL LSSIGSSFL+GLA+WLVWADGGFHGGSNALPLYIAHLSLSVVW+PLVLVIRSV
Sbjct: 61  GPLWLLQLSSIGSSFLVGLAAWLVWADGGFHGGSNALPLYIAHLSLSVVWSPLVLVIRSV 120

Query: 121 VIAFLFCVLDFVTLFACYRTFKRVNPFAKDLMKPCLAWTAYLSAVTYVFIDL 173
           VIAFLFCVLDFVTLFACYR F+RVNPFAKDLMKPCLAWTAYLSAVTYVFI L
Sbjct: 121 VIAFLFCVLDFVTLFACYRAFERVNPFAKDLMKPCLAWTAYLSAVTYVFIHL 172

[Close]

BLAST of PI0020990 vs. NCBI nr
Match: XP_004134488.1 (translocator protein homolog [Cucumis sativus])

HSP 1 Score: 317.8 bits (813), Expect = 5.9e-83
Identity = 159/172 (92.44%), Postives = 164/172 (95.35%), Query Frame = 0


Query: 1   MPSSNPPFKSRPESKYTKAKRALRSLAVSVAIPVFITIAVIFLFGRSSRHFPNLNRPIWI 60
           MPSSNPPFKSRPESKYTKAKRALRSLAVSVAIPV +TIA IFLFGRSSRH+PN NRPIWI
Sbjct: 1   MPSSNPPFKSRPESKYTKAKRALRSLAVSVAIPVSLTIAAIFLFGRSSRHYPNRNRPIWI 60

Query: 61  APLWLLHLSSIGSSFLIGLASWLVWADGGFHGGSNALPLYIAHLSLSVVWNPLVLVIRSV 120
            PLWL+ LSSIGSSFL+GLA+WLVWADGGFHGGSNALPLYIAHLSLSVVWNPLVLVIRSV
Sbjct: 61  GPLWLIQLSSIGSSFLVGLAAWLVWADGGFHGGSNALPLYIAHLSLSVVWNPLVLVIRSV 120

Query: 121 VIAFLFCVLDFVTLFACYRTFKRVNPFAKDLMKPCLAWTAYLSAVTYVFIDL 173
           VIAFLFCVLD VTLFACY  FKRVNPFAKDLMKPCLAWTAYLSAVTYVFIDL
Sbjct: 121 VIAFLFCVLDCVTLFACYLAFKRVNPFAKDLMKPCLAWTAYLSAVTYVFIDL 172

[Close]

BLAST of PI0020990 vs. NCBI nr
Match: XP_022973726.1 (translocator protein homolog [Cucurbita maxima] >XP_022975172.1 translocator protein homolog [Cucurbita maxima])

HSP 1 Score: 311.2 bits (796), Expect = 5.5e-81
Identity = 154/170 (90.59%), Postives = 165/170 (97.06%), Query Frame = 0


Query: 3   SSNPPFKSRPESKYTKAKRALRSLAVSVAIPVFITIAVIFLFGRSSRHFPNLNRPIWIAP 62
           SS+PPFKSRPESKYTKAKRALRSLAVSVAIP+ +TIAVIFLFGRSSRHFPN NRPIW+AP
Sbjct: 2   SSSPPFKSRPESKYTKAKRALRSLAVSVAIPLTLTIAVIFLFGRSSRHFPNRNRPIWVAP 61

Query: 63  LWLLHLSSIGSSFLIGLASWLVWADGGFHGGSNALPLYIAHLSLSVVWNPLVLVIRSVVI 122
           LWLLHLSSI SSFLIGLA+WLVWADGGFH GSNALPLYIAHLSLSVVWNPLVLVIR++++
Sbjct: 62  LWLLHLSSISSSFLIGLAAWLVWADGGFHCGSNALPLYIAHLSLSVVWNPLVLVIRALLL 121

Query: 123 AFLFCVLDFVTLFACYRTFKRVNPFAKDLMKPCLAWTAYLSAVTYVFIDL 173
           AFLFCVLDFVTL+ACYRTFKRVNPFAKDL+KPCLAWTAYL AVTYVFIDL
Sbjct: 122 AFLFCVLDFVTLYACYRTFKRVNPFAKDLIKPCLAWTAYLCAVTYVFIDL 171

[Close]

BLAST of PI0020990 vs. NCBI nr
Match: XP_023540366.1 (translocator protein homolog [Cucurbita pepo subsp. pepo])

HSP 1 Score: 308.9 bits (790), Expect = 2.7e-80
Identity = 153/170 (90.00%), Postives = 164/170 (96.47%), Query Frame = 0


Query: 3   SSNPPFKSRPESKYTKAKRALRSLAVSVAIPVFITIAVIFLFGRSSRHFPNLNRPIWIAP 62
           SS+PPFKSRPESKYTKAKRALRSLAVSVAIP+ +TIAVIFLFGRSSRHFPN NRPIW+AP
Sbjct: 57  SSSPPFKSRPESKYTKAKRALRSLAVSVAIPLTLTIAVIFLFGRSSRHFPNRNRPIWVAP 116

Query: 63  LWLLHLSSIGSSFLIGLASWLVWADGGFHGGSNALPLYIAHLSLSVVWNPLVLVIRSVVI 122
           LWLLHLSSI SSFLIGLA+WLVWADGGFH GSNALPLYIAHLSLSVVWNPLVLVIR++++
Sbjct: 117 LWLLHLSSISSSFLIGLAAWLVWADGGFHCGSNALPLYIAHLSLSVVWNPLVLVIRALLL 176

Query: 123 AFLFCVLDFVTLFACYRTFKRVNPFAKDLMKPCLAWTAYLSAVTYVFIDL 173
           AFLFCVLD VTL+ACYRTFKRVNPFAKDL+KPCLAWTAYL AVTYVFIDL
Sbjct: 177 AFLFCVLDLVTLYACYRTFKRVNPFAKDLIKPCLAWTAYLCAVTYVFIDL 226

[Close]

BLAST of PI0020990 vs. TAIR 10
Match: AT2G47770.1 (TSPO(outer membrane tryptophan-rich sensory protein)-related )

HSP 1 Score: 134.8 bits (338), Expect = 6.5e-32
Identity = 68/157 (43.31%), Postives = 94/157 (59.87%), Query Frame = 0


Query: 9   KSRPESKYTKAKRALRSLAVSVAIPVFITIAVIFLFGRSSRHFPNLNRPIWIAPLWLLHL 68
           K + + K   AKR L+SL V+VA PV +T+   +  G S  +        WI PLWLLH 
Sbjct: 33  KGKRDQKRAMAKRGLKSLTVAVAAPVLVTLFATYFLGTSDGYGNRAKSSSWIPPLWLLHT 92

Query: 69  SSIGSSFLIGLASWLVWADGGFHGGSNALPLYIAHLSLSVVWNPLVLVIRSVVIAFLFCV 128
           + + SS L+GLA+WLVW DGGFH   NAL LY+A   L +VW+P+   + S V      +
Sbjct: 93  TCLASSGLMGLAAWLVWVDGGFHKKPNALYLYLAQFLLCLVWDPVTFRVGSGVAGLAVWL 152

Query: 129 LDFVTLFACYRTFKRVNPFAKDLMKPCLAWTAYLSAV 166
                LF CY+ F  ++P A +L+KPCLAW A+++AV
Sbjct: 153 GQSAALFGCYKAFNEISPVAGNLVKPCLAWAAFVAAV 189

The following BLAST results are available for this feature:

BLAST of PI0020990 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O82245	9.2e-31	43.31	Translocator protein homolog OS=Arabidopsis thaliana OX=3702 GN=TSPO PE=1 SV=1	[more]
Q9GMC9	1.7e-05	29.69	Translocator protein OS=Ovis aries OX=9940 GN=TSPO PE=1 SV=1	[more]
P30536	8.7e-05	29.69	Translocator protein OS=Homo sapiens OX=9606 GN=TSPO PE=1 SV=3	[more]
P50637	1.5e-04	29.69	Translocator protein OS=Mus musculus OX=10090 GN=Tspo PE=1 SV=1	[more]
E2RDM9	2.5e-04	30.34	Translocator protein 2 OS=Canis lupus familiaris OX=9615 GN=TSPO2 PE=1 SV=1	[more]

BLAST of PI0020990 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CWC4	3.3e-84	93.60	Translocator protein-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]
A0A1S4DTF2	3.3e-84	93.60	translocator protein homolog OS=Cucumis melo OX=3656 GN=LOC107990392 PE=3 SV=1	[more]
A0A0A0L583	2.8e-83	92.44	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G154290 PE=3 SV=1	[more]
A0A6J1ICB9	2.7e-81	90.59	translocator protein homolog OS=Cucurbita maxima OX=3661 GN=LOC111474208 PE=3 SV...	[more]
A0A6J1FZS9	3.8e-80	90.00	translocator protein homolog OS=Cucurbita moschata OX=3662 GN=LOC111449384 PE=3 ...	[more]

BLAST of PI0020990 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038878873.1	4.8e-85	94.19	translocator protein homolog [Benincasa hispida]	[more]
XP_016898980.1	6.9e-84	93.60	PREDICTED: translocator protein homolog [Cucumis melo] >KAA0049494.1 translocato...	[more]
XP_004134488.1	5.9e-83	92.44	translocator protein homolog [Cucumis sativus]	[more]
XP_022973726.1	5.5e-81	90.59	translocator protein homolog [Cucurbita maxima] >XP_022975172.1 translocator pro...	[more]
XP_023540366.1	2.7e-80	90.00	translocator protein homolog [Cucurbita pepo subsp. pepo]	[more]

BLAST of PI0020990 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G47770.1	6.5e-32	43.31	TSPO(outer membrane tryptophan-rich sensory protein)-related	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR038330	TspO/MBR-related superfamily	GENE3D	1.20.1260.100	TspO/MBR protein	coord: 20..172 e-value: 7.0E-23 score: 82.9
IPR004307	TspO/MBR-related protein	PIRSF	PIRSF005859	PBR	coord: 15..172 e-value: 9.6E-32 score: 107.6
IPR004307	TspO/MBR-related protein	PFAM	PF03073	TspO_MBR	coord: 29..168 e-value: 3.8E-21 score: 75.5
IPR004307	TspO/MBR-related protein	PANTHER	PTHR10057	PERIPHERAL-TYPE BENZODIAZEPINE RECEPTOR	coord: 4..171
IPR004307	TspO/MBR-related protein	CDD	cd15904	TSPO_MBR	coord: 26..170 e-value: 1.29361E-25 score: 93.7156
None	No IPR available	PANTHER	PTHR10057:SF6	TSPO/MBR FAMILY PROTEIN	coord: 4..171

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0020990.1	PI0020990.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0018216	peptidyl-arginine methylation
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0008168	methyltransferase activity