PI0020838 (gene) Melon (PI 482460) v1

Overview


Name	PI0020838
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	Protein conserved in the green lineage and diatoms 27, chloroplastic
Location	chr07: 23290139 .. 23291658 (-)
RNA-Seq Expression	PI0020838
Synteny	PI0020838

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTGTCGTGGTGTAAGTATTCTGTTTTTTATCATTCTTAAAGAAAATCCAGTTTTTTAATTGAGTCTACAAATATTTTAGTCTAAAACAATAAAAAGAAAAGGAAGAGAAAAAAAAAACAAAACAAATGACTTTCAGTGCTGAAATGAAAATGAAAATCTAATTATTTGGATAGGGAATTATTGAGCAACCAGAAATTGAGGAAAGAAACCGTTGGCCGGAGTCATGAACATACTCCCGGGAAGAGTACCGCCGCCGAATTTCCTTCTGTCCGCGCCCAACTCCAGGCCATTAATTTCACCGTTCACAAACACTAGACCCCTTCACCTCAGAAATTCCGTTTCTAGAATATCCCTCTCATTCTCTTTCCGAAAAGGAAGCAACATGCCACCGGAAACCGGATGCCCTGTTCCGCCGGAACAGCTGCCGATTAACGAATATCAGACTCTCTCCACCTCTTTCCCCTTCTCATGGGCCGCTGGAGACATCGTTGAGTACTGTTCTCGATTGGTCGCCACCGGCGCTTCCTTCGCTCTCTTCATCGGGCTTCCGGTTGCTTGGTTCGGCACCGTGGGAGTCGAATCGGATCCGTTGAAACGATTTCTTTGCGCTGTTTCGAGTGGGATTTTGTTCGTCACGATTGCTGTTGTTAGGATGTATCTCGGCTGGGCTTACGTCGGTAACCGTCTCCTCAGTGCGACTGTCGAATGTAAACCCTAACTTCTGTGTTCTTACTAACCCTAAAATCGTAGTTCTTCGTTCAAAAAGAATTAAATCATCGTTCTGAAAATTTCCTTTATACAGACGAAGAGACCGGATGGTACGACGGGCAGGTACACTCAGACAGTTCTTCTTCTTCTTCTTCTTATAGGATCAAGGTTCCATTTCATCCCTGAAATTAAAAGCTTATGTTTGCAGATTTGGGTAAAAACCGCCCAAGTTTTAGCCCGCGATCGCCTCCTCGGTTCCTACACTGTAAGTAACCAATCCCGATTTCGATTTCGATTTCGGCTCCATAAATCCAAGTTTCAGTTGCGATTTAGAAATCTTATAGCGTTTAAAATAGGTGAAGCCGGTGCTCAATAGGCTGAAGTACACCCTCGTTAGCCTTGCGGCGTCTCTGTTTGTGTCCATTGTTGTGCTCATCAACGTTGATGGAGGAGAATTGCTAGGGCCTTTCTTGACCGGAAAATCTGCAACGGATGAGGGCGGCGGTAGAGTAATTCCCGGTGTTTATAGCGATGAATCCGCTAGATCTTTCGAGCCTGATGCGTTCTGTGGGCCTGGGGAACATGATCTTCTTCACTGATATTCATTCTAATGCCAATTGTTTGATTAATGTTTTCTTATTATATTTTTTAAACCATAGTTTTATACGCAATTACACATAGTTTTAACTCATTGTAAATTTTATACTCTGTTTTTTCTTTTACATAATTTATTTTCTATTAAATATTAACATAGCTCAACATAAAAAAAAAAATATCATACTTTAAATATCAATATCTATATCTTACTAAA

mRNA sequence

TTTGTCGTGGTGTAAGTATTCTGTTTTTTATCATTCTTAAAGAAAATCCAGTTTTTTAATTGAGTCTACAAATATTTTAGTCTAAAACAATAAAAAGAAAAGGAAGAGAAAAAAAAAACAAAACAAATGACTTTCAGTGCTGAAATGAAAATGAAAATCTAATTATTTGGATAGGGAATTATTGAGCAACCAGAAATTGAGGAAAGAAACCGTTGGCCGGAGTCATGAACATACTCCCGGGAAGAGTACCGCCGCCGAATTTCCTTCTGTCCGCGCCCAACTCCAGGCCATTAATTTCACCGTTCACAAACACTAGACCCCTTCACCTCAGAAATTCCGTTTCTAGAATATCCCTCTCATTCTCTTTCCGAAAAGGAAGCAACATGCCACCGGAAACCGGATGCCCTGTTCCGCCGGAACAGCTGCCGATTAACGAATATCAGACTCTCTCCACCTCTTTCCCCTTCTCATGGGCCGCTGGAGACATCGTTGAGTACTGTTCTCGATTGGTCGCCACCGGCGCTTCCTTCGCTCTCTTCATCGGGCTTCCGGTTGCTTGGTTCGGCACCGTGGGAGTCGAATCGGATCCGTTGAAACGATTTCTTTGCGCTGTTTCGAGTGGGATTTTGTTCGTCACGATTGCTGTTGTTAGGATGTATCTCGGCTGGGCTTACGTCGGTAACCGTCTCCTCAGTGCGACTGTCGAATACGAAGAGACCGGATGGTACGACGGGCAGATTTGGGTAAAAACCGCCCAAGTTTTAGCCCGCGATCGCCTCCTCGGTTCCTACACTGTGAAGCCGGTGCTCAATAGGCTGAAGTACACCCTCGTTAGCCTTGCGGCGTCTCTGTTTGTGTCCATTGTTGTGCTCATCAACGTTGATGGAGGAGAATTGCTAGGGCCTTTCTTGACCGGAAAATCTGCAACGGATGAGGGCGGCGGTAGAGTAATTCCCGGTGTTTATAGCGATGAATCCGCTAGATCTTTCGAGCCTGATGCGTTCTGTGGGCCTGGGGAACATGATCTTCTTCACTGATATTCATTCTAATGCCAATTGTTTGATTAATGTTTTCTTATTATATTTTTTAAACCATAGTTTTATACGCAATTACACATAGTTTTAACTCATTGTAAATTTTATACTCTGTTTTTTCTTTTACATAATTTATTTTCTATTAAATATTAACATAGCTCAACATAAAAAAAAAAATATCATACTTTAAATATCAATATCTATATCTTACTAAA

Coding sequence (CDS)

ATGAACATACTCCCGGGAAGAGTACCGCCGCCGAATTTCCTTCTGTCCGCGCCCAACTCCAGGCCATTAATTTCACCGTTCACAAACACTAGACCCCTTCACCTCAGAAATTCCGTTTCTAGAATATCCCTCTCATTCTCTTTCCGAAAAGGAAGCAACATGCCACCGGAAACCGGATGCCCTGTTCCGCCGGAACAGCTGCCGATTAACGAATATCAGACTCTCTCCACCTCTTTCCCCTTCTCATGGGCCGCTGGAGACATCGTTGAGTACTGTTCTCGATTGGTCGCCACCGGCGCTTCCTTCGCTCTCTTCATCGGGCTTCCGGTTGCTTGGTTCGGCACCGTGGGAGTCGAATCGGATCCGTTGAAACGATTTCTTTGCGCTGTTTCGAGTGGGATTTTGTTCGTCACGATTGCTGTTGTTAGGATGTATCTCGGCTGGGCTTACGTCGGTAACCGTCTCCTCAGTGCGACTGTCGAATACGAAGAGACCGGATGGTACGACGGGCAGATTTGGGTAAAAACCGCCCAAGTTTTAGCCCGCGATCGCCTCCTCGGTTCCTACACTGTGAAGCCGGTGCTCAATAGGCTGAAGTACACCCTCGTTAGCCTTGCGGCGTCTCTGTTTGTGTCCATTGTTGTGCTCATCAACGTTGATGGAGGAGAATTGCTAGGGCCTTTCTTGACCGGAAAATCTGCAACGGATGAGGGCGGCGGTAGAGTAATTCCCGGTGTTTATAGCGATGAATCCGCTAGATCTTTCGAGCCTGATGCGTTCTGTGGGCCTGGGGAACATGATCTTCTTCACTGA

Protein sequence

MNILPGRVPPPNFLLSAPNSRPLISPFTNTRPLHLRNSVSRISLSFSFRKGSNMPPETGCPVPPEQLPINEYQTLSTSFPFSWAAGDIVEYCSRLVATGASFALFIGLPVAWFGTVGVESDPLKRFLCAVSSGILFVTIAVVRMYLGWAYVGNRLLSATVEYEETGWYDGQIWVKTAQVLARDRLLGSYTVKPVLNRLKYTLVSLAASLFVSIVVLINVDGGELLGPFLTGKSATDEGGGRVIPGVYSDESARSFEPDAFCGPGEHDLLH

Homology

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BLAST of PI0020838 vs. ExPASy Swiss-Prot
Match: Q9FN15 (Protein CONSERVED IN THE GREEN LINEAGE AND DIATOMS 27, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CGLD27 PE=2 SV=1)

HSP 1 Score: 141.7 bits (356), Expect = 1.2e-32
Identity = 80/176 (45.45%), Postives = 109/176 (61.93%), Query Frame = 0


Query: 43  SLSFSFRKGSNMPPETGCPVPPEQLPINEYQTLSTSFPFSWAAGDIVEYCSRLVATGASF 102
           S+SFS   G +  P +   VP +Q P+NEY +L     +SW      E+  RL       
Sbjct: 70  SMSFS---GQSWDPSSEIEVPSDQRPVNEYSSLKEGMLYSWGELGPSEFFIRLGGLWLVT 129

Query: 103 ALFIGLPVAWFGTVGVESDPLKRFLCAVSSGILF-VTIAVVRMYLGWAYVGNRLLSATVE 162
              +G+PVA   +     +PL RF+ A  +G LF V++ V+R+YLGW+YVG+RLLSA + 
Sbjct: 130 FTVLGVPVA-AASFNPSREPL-RFILAAGTGTLFLVSLIVLRIYLGWSYVGDRLLSAVIP 189

Query: 163 YEETGWYDGQIWVKTAQVLARDRLLGSYTVKPVLNRLKYTLVSLAASLFVSIVVLI 218
           YEE+GWYDGQ+WVK  +VLARDRLLGSY VKPV+  LK TL+   A L  + V+ +
Sbjct: 190 YEESGWYDGQMWVKPPEVLARDRLLGSYKVKPVIKMLKQTLIGTGALLVSAFVLFV 240

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BLAST of PI0020838 vs. ExPASy Swiss-Prot
Match: P48276 (Uncharacterized protein ycf36 OS=Cyanophora paradoxa OX=2762 GN=ycf36 PE=3 SV=1)

HSP 1 Score: 129.4 bits (324), Expect = 6.1e-29
Identity = 65/145 (44.83%), Postives = 94/145 (64.83%), Query Frame = 0


Query: 58  TGCPVPPEQLPINEYQTLSTSFPFSWAAGDIVEYCSRLVATGASFALFIGLPVAWFGTVG 117
           T CP+P EQ P+NEYQ L+ S  F+W +  +  Y   L  T  S    +   + ++  + 
Sbjct: 3   TFCPIPTEQQPLNEYQILNNSVLFNWPSQKLKIYFFYLF-TIYSIGFLLTFLITFYNDLF 62

Query: 118 VESDPLKRFLCAVSSGILFVTIAVVRMYLGWAYVGNRLLSATVEYEETGWYDGQIWVKTA 177
           +   P+  F+  +  G   + + ++R+YLGW+Y+  RLLSATV YEE+GWYDGQIWVK++
Sbjct: 63  I-VHPVNIFVHGIIGGNFVLILDLLRLYLGWSYICQRLLSATVSYEESGWYDGQIWVKSS 122

Query: 178 QVLARDRLLGSYTVKPVLNRLKYTL 203
           +VL +DRL+G Y V+PVLNRLK TL
Sbjct: 123 EVLIQDRLIGIYQVRPVLNRLKQTL 145

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BLAST of PI0020838 vs. ExPASy Swiss-Prot
Match: P51273 (Uncharacterized protein ycf36 OS=Porphyra purpurea OX=2787 GN=ycf36 PE=3 SV=1)

HSP 1 Score: 120.2 bits (300), Expect = 3.7e-26
Identity = 63/147 (42.86%), Postives = 86/147 (58.50%), Query Frame = 0


Query: 60  CPVPPEQLPINEYQTLSTSFPFSWAAGDIVEYCSRLVATGASFALFIGLPVAWFGTVGVE 119
           CPVP EQ P+NEY +L  S+ F W       Y  ++  T  +   F+  PV       + 
Sbjct: 8   CPVPLEQQPVNEYNSLKNSWFFCWPTLSSHSYNKKITITLIA-TCFLVSPVL-LSIFPIA 67

Query: 120 SDPLKRFLCAVSSGILFVTIAVVRMYLGWAYVGNRLLSATVEYEETGWYDGQIWVKTAQV 179
             PLK F        L     ++R+YLGW+YV  RL+SATV YEE+GWYDGQIWVK +++
Sbjct: 68  KLPLKFFFSEFIISSLITCFILIRLYLGWSYVVKRLMSATVFYEESGWYDGQIWVKPSEI 127

Query: 180 LARDRLLGSYTVKPVLNRLKYTLVSLA 207
           L +DR +G Y V P+LN++K TL  L+
Sbjct: 128 LVKDRFIGLYEVFPLLNKIKNTLSCLS 152

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BLAST of PI0020838 vs. ExPASy Swiss-Prot
Match: Q1XDL3 (Uncharacterized protein ycf36 OS=Pyropia yezoensis OX=2788 GN=ycf36 PE=3 SV=1)

HSP 1 Score: 116.7 bits (291), Expect = 4.1e-25
Identity = 66/160 (41.25%), Postives = 92/160 (57.50%), Query Frame = 0


Query: 58  TGCPVPPEQLPINEYQTLSTSFPFSWAAGDIVEYCSRLVATGASFALFIGLPVAWFGTVG 117
           T CPVP EQ P++EY +L  S+ F W       Y  ++        L +  P+       
Sbjct: 6   TQCPVPKEQQPVHEYTSLKNSWFFCWPTLSRRSYNKKITIALLLNCLLVS-PIL-LSIFP 65

Query: 118 VESDPLKRFLCAVSSGILFVTIAVVRMYLGWAYVGNRLLSATVEYEETGWYDGQIWVKTA 177
           +   PLK F     +  L     ++R+YLGW+YV  RL+SATV YEE+GWYDGQIWVK +
Sbjct: 66  ITKLPLKFFFSEFITSSLMTGFILIRLYLGWSYVVKRLMSATVFYEESGWYDGQIWVKPS 125

Query: 178 QVLARDRLLGSYTVKPVLNRLKYTLVSLAASLFVSIVVLI 218
           ++L +DR +G Y V P+LN++K TL  L  SL +S  VL+
Sbjct: 126 EILLKDRFIGLYEVFPLLNKIKNTLSFL--SLMISGPVLL 161

[Close]

BLAST of PI0020838 vs. ExPASy Swiss-Prot
Match: O78501 (Uncharacterized protein ycf36 OS=Guillardia theta OX=55529 GN=ycf36 PE=3 SV=1)

HSP 1 Score: 102.1 bits (253), Expect = 1.0e-20
Identity = 54/140 (38.57%), Postives = 78/140 (55.71%), Query Frame = 0


Query: 60  CPVPPEQLPINEYQTLSTSFPFSWAAGDIVEYCSRLVATGASFALFIGLPVAWFGTVGVE 119
           CPVP  QLPINEY  L++++ FSWA      Y   L+       LF  + + +       
Sbjct: 3   CPVPENQLPINEYNKLTSAWDFSWACKIGKLYYKFLLKMQLCLFLFFCICLNFL------ 62

Query: 120 SDPLKRFLCAVSSGILFVTIAVVRMYLGWAYVGNRLLSATVEYEETGWYDGQIWVKTAQV 179
               +  L ++    LF+ +  +R YLG+ Y+  RLL + + YEE+ WYDGQ+WVK    
Sbjct: 63  DSKYETGLYSLILSTLFICLICLRTYLGFRYIYVRLLKSALPYEESSWYDGQVWVKNINY 122

Query: 180 LARDRLLGSYTVKPVLNRLK 200
           L +DRL+  YTV P+L+RLK
Sbjct: 123 LIKDRLVADYTVLPILSRLK 136

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BLAST of PI0020838 vs. ExPASy TrEMBL
Match: A0A5D3D958 (DUF1230 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold134G002200 PE=4 SV=1)

HSP 1 Score: 514.2 bits (1323), Expect = 3.2e-142
Identity = 255/270 (94.44%), Postives = 260/270 (96.30%), Query Frame = 0


Query: 1   MNILPGRVPPPNFLLSAPNSRPLISPFTNTRPLHLRNSVSRISLSFSFRKGSNMPPETGC 60
           M IL G  PPP FLLSAPNSRPLI PFTNTRPLHLRNSVSRISLSFSFRKGSN+PPETGC
Sbjct: 1   MYILLGTAPPPTFLLSAPNSRPLILPFTNTRPLHLRNSVSRISLSFSFRKGSNVPPETGC 60

Query: 61  PVPPEQLPINEYQTLSTSFPFSWAAGDIVEYCSRLVATGASFALFIGLPVAWFGTVGVES 120
           PVPPEQLPINEYQTLSTSFPFSWAAGDIVEYCSRLVATGASFALFIGLPVAWFGTVGVES
Sbjct: 61  PVPPEQLPINEYQTLSTSFPFSWAAGDIVEYCSRLVATGASFALFIGLPVAWFGTVGVES 120

Query: 121 DPLKRFLCAVSSGILFVTIAVVRMYLGWAYVGNRLLSATVEYEETGWYDGQIWVKTAQVL 180
           DPLKRFLCAVSSGILFVTIAVVRMYLGWAYVGNRLLSATVEYEETGWYDGQIWVKTAQVL
Sbjct: 121 DPLKRFLCAVSSGILFVTIAVVRMYLGWAYVGNRLLSATVEYEETGWYDGQIWVKTAQVL 180

Query: 181 ARDRLLGSYTVKPVLNRLKYTLVSLAASLFVSIVVLINVDGGELLGPFLTGKSATDEGGG 240
           ARDRLLGSYTVKPVLNRLKYTLVSLAASLFVSIVVLIN+DGGELLGPF TGKSA +E GG
Sbjct: 181 ARDRLLGSYTVKPVLNRLKYTLVSLAASLFVSIVVLINIDGGELLGPFFTGKSAANEDGG 240

Query: 241 RVIPGVYSDESARSFEPDAFCGPGEHDLLH 271
           RV+PG+YSDESARSFEPDAFCGPGE DLLH
Sbjct: 241 RVVPGIYSDESARSFEPDAFCGPGELDLLH 270

[Close]

BLAST of PI0020838 vs. ExPASy TrEMBL
Match: A0A1S3BTX6 (uncharacterized protein ycf36 OS=Cucumis melo OX=3656 GN=LOC103493654 PE=4 SV=1)

HSP 1 Score: 514.2 bits (1323), Expect = 3.2e-142
Identity = 255/270 (94.44%), Postives = 260/270 (96.30%), Query Frame = 0


Query: 1   MNILPGRVPPPNFLLSAPNSRPLISPFTNTRPLHLRNSVSRISLSFSFRKGSNMPPETGC 60
           M IL G  PPP FLLSAPNSRPLI PFTNTRPLHLRNSVSRISLSFSFRKGSN+PPETGC
Sbjct: 1   MYILLGTAPPPTFLLSAPNSRPLILPFTNTRPLHLRNSVSRISLSFSFRKGSNVPPETGC 60

Query: 61  PVPPEQLPINEYQTLSTSFPFSWAAGDIVEYCSRLVATGASFALFIGLPVAWFGTVGVES 120
           PVPPEQLPINEYQTLSTSFPFSWAAGDIVEYCSRLVATGASFALFIGLPVAWFGTVGVES
Sbjct: 61  PVPPEQLPINEYQTLSTSFPFSWAAGDIVEYCSRLVATGASFALFIGLPVAWFGTVGVES 120

Query: 121 DPLKRFLCAVSSGILFVTIAVVRMYLGWAYVGNRLLSATVEYEETGWYDGQIWVKTAQVL 180
           DPLKRFLCAVSSGILFVTIAVVRMYLGWAYVGNRLLSATVEYEETGWYDGQIWVKTAQVL
Sbjct: 121 DPLKRFLCAVSSGILFVTIAVVRMYLGWAYVGNRLLSATVEYEETGWYDGQIWVKTAQVL 180

Query: 181 ARDRLLGSYTVKPVLNRLKYTLVSLAASLFVSIVVLINVDGGELLGPFLTGKSATDEGGG 240
           ARDRLLGSYTVKPVLNRLKYTLVSLAASLFVSIVVLIN+DGGELLGPF TGKSA +E GG
Sbjct: 181 ARDRLLGSYTVKPVLNRLKYTLVSLAASLFVSIVVLINIDGGELLGPFFTGKSAANEDGG 240

Query: 241 RVIPGVYSDESARSFEPDAFCGPGEHDLLH 271
           RV+PG+YSDESARSFEPDAFCGPGE DLLH
Sbjct: 241 RVVPGIYSDESARSFEPDAFCGPGELDLLH 270

[Close]

BLAST of PI0020838 vs. ExPASy TrEMBL
Match: A0A0A0L3Z3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G646010 PE=4 SV=1)

HSP 1 Score: 501.9 bits (1291), Expect = 1.7e-138
Identity = 249/269 (92.57%), Postives = 256/269 (95.17%), Query Frame = 0


Query: 1   MNILPGRVPPPNFLLSAPNSRPLISPFTNTRPLHLRNSVSRISLSFSFRKGSNMPPETGC 60
           M ILPG   PP FLLS PNSRPLISPFTNTR LHLRNSVSR+ LSFSFRKGSN+PPETGC
Sbjct: 1   MYILPGSASPPTFLLSVPNSRPLISPFTNTRLLHLRNSVSRMPLSFSFRKGSNVPPETGC 60

Query: 61  PVPPEQLPINEYQTLSTSFPFSWAAGDIVEYCSRLVATGASFALFIGLPVAWFGTVGVES 120
           PVPPEQLPINEYQTLS SFPFSWAAGDIVE+CSRLVATGASFALFIGLPVAWFGTVGVES
Sbjct: 61  PVPPEQLPINEYQTLSASFPFSWAAGDIVEFCSRLVATGASFALFIGLPVAWFGTVGVES 120

Query: 121 DPLKRFLCAVSSGILFVTIAVVRMYLGWAYVGNRLLSATVEYEETGWYDGQIWVKTAQVL 180
           DPLK  LCAVSSGILFVTIAV+RMYLGWAYVGNRLLSATVEYEETGWYDGQIWVKTAQVL
Sbjct: 121 DPLKLSLCAVSSGILFVTIAVLRMYLGWAYVGNRLLSATVEYEETGWYDGQIWVKTAQVL 180

Query: 181 ARDRLLGSYTVKPVLNRLKYTLVSLAASLFVSIVVLINVDGGELLGPFLTGKSATDEGGG 240
           ARDRLLGSYTVKPVLNRLKYTLVSLAASLFVSIVVLIN+DGGELLGPF TGKSA ++GGG
Sbjct: 181 ARDRLLGSYTVKPVLNRLKYTLVSLAASLFVSIVVLINIDGGELLGPFFTGKSAANDGGG 240

Query: 241 RVIPGVYSDESARSFEPDAFCGPGEHDLL 270
           RVIPGVYSDESARSFEPDAFCGPGEHDLL
Sbjct: 241 RVIPGVYSDESARSFEPDAFCGPGEHDLL 269

[Close]

BLAST of PI0020838 vs. ExPASy TrEMBL
Match: A0A6J1CQK2 (uncharacterized protein ycf36 OS=Momordica charantia OX=3673 GN=LOC111013808 PE=4 SV=1)

HSP 1 Score: 473.0 bits (1216), Expect = 8.3e-130
Identity = 235/265 (88.68%), Postives = 246/265 (92.83%), Query Frame = 0


Query: 1   MNILPGRVPPPNFLLSAPNSRPLISPFTNTRPLHLRNSVSRISLSFSFRKGSNMPPETGC 60
           M I+P   PP  F  SAPN RP+ISPF N RPLHLRNS+SRISLSFSFRKG+NMPPETGC
Sbjct: 5   MYIVPANAPPRAFFPSAPNFRPIISPFINPRPLHLRNSLSRISLSFSFRKGNNMPPETGC 64

Query: 61  PVPPEQLPINEYQTLSTSFPFSWAAGDIVEYCSRLVATGASFALFIGLPVAWFGTVGVES 120
           PVPPEQ PINEYQTLSTSFPFSWA+GDIVEYCSRLVATGASFALF+GLP+ WFGTVGVES
Sbjct: 65  PVPPEQQPINEYQTLSTSFPFSWASGDIVEYCSRLVATGASFALFVGLPITWFGTVGVES 124

Query: 121 DPLKRFLCAVSSGILFVTIAVVRMYLGWAYVGNRLLSATVEYEETGWYDGQIWVKTAQVL 180
           DPLKR LCAVSSGILFVTIAVVRMYLGWAYVGNRLLSATVEYEETGWYDGQIWVKTAQVL
Sbjct: 125 DPLKRSLCAVSSGILFVTIAVVRMYLGWAYVGNRLLSATVEYEETGWYDGQIWVKTAQVL 184

Query: 181 ARDRLLGSYTVKPVLNRLKYTLVSLAASLFVSIVVLINVDGGELLGPFLTGKSATDEGGG 240
           ARDRLLGSYTVKPVLNRLKYTLV+LAASLFVSIVVLIN+DGG+LLGP  TGKSA +  GG
Sbjct: 185 ARDRLLGSYTVKPVLNRLKYTLVTLAASLFVSIVVLINIDGGQLLGPLFTGKSA-EVDGG 244

Query: 241 RVIPGVYSDESARSFEPDAFCGPGE 266
           RVIPGVYSDESARSFEPDAFCGPGE
Sbjct: 245 RVIPGVYSDESARSFEPDAFCGPGE 268

[Close]

BLAST of PI0020838 vs. ExPASy TrEMBL
Match: A0A6J1FDI1 (uncharacterized protein ycf36 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111443023 PE=4 SV=1)

HSP 1 Score: 469.9 bits (1208), Expect = 7.0e-129
Identity = 234/268 (87.31%), Postives = 243/268 (90.67%), Query Frame = 0


Query: 1   MNILPGRVPPPNFLLSAPNSRPLISPFTNTRPLHLRNSVSRISLSFSFRKGSNMPPETGC 60
           M ILPG+  P  F  SAPN RPLISPF N RP HLRNS SRISLSFSFRKG+NMP +TGC
Sbjct: 1   MYILPGKPSPATFFPSAPNPRPLISPFKNPRPFHLRNSPSRISLSFSFRKGNNMPSDTGC 60

Query: 61  PVPPEQLPINEYQTLSTSFPFSWAAGDIVEYCSRLVATGASFALFIGLPVAWFGTVGVES 120
           PVPPEQLPINEYQTLSTSFPFSWA GDIVEYCSRLVATGASFALFIGLPVAWFGTVGVES
Sbjct: 61  PVPPEQLPINEYQTLSTSFPFSWAVGDIVEYCSRLVATGASFALFIGLPVAWFGTVGVES 120

Query: 121 DPLKRFLCAVSSGILFVTIAVVRMYLGWAYVGNRLLSATVEYEETGWYDGQIWVKTAQVL 180
           DPL R LCAVSSGILFVTIAVVRMYLGWAYVGNRLLSATVEYEETGWYDGQIWVKTA+VL
Sbjct: 121 DPLSRSLCAVSSGILFVTIAVVRMYLGWAYVGNRLLSATVEYEETGWYDGQIWVKTAEVL 180

Query: 181 ARDRLLGSYTVKPVLNRLKYTLVSLAASLFVSIVVLINVDGGELLGPFLTGKSATDEGGG 240
           ARDRLLGSYTVKPVL+RLKYTLVSLAASLFVSI+VLIN+DG +LLGPF TGK A D+   
Sbjct: 181 ARDRLLGSYTVKPVLSRLKYTLVSLAASLFVSIIVLINIDGSQLLGPFFTGKYAADDSSS 240

Query: 241 RVIPGVYSDESARSFEPDAFCGPGEHDL 269
           RVIPGVYSDESARSFEPDAFCG GE DL
Sbjct: 241 RVIPGVYSDESARSFEPDAFCGRGEDDL 268

[Close]

BLAST of PI0020838 vs. NCBI nr
Match: XP_008452715.1 (PREDICTED: uncharacterized protein ycf36 [Cucumis melo] >KAA0064494.1 DUF1230 domain-containing protein [Cucumis melo var. makuwa] >TYK20096.1 DUF1230 domain-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 514.2 bits (1323), Expect = 6.7e-142
Identity = 255/270 (94.44%), Postives = 260/270 (96.30%), Query Frame = 0


Query: 1   MNILPGRVPPPNFLLSAPNSRPLISPFTNTRPLHLRNSVSRISLSFSFRKGSNMPPETGC 60
           M IL G  PPP FLLSAPNSRPLI PFTNTRPLHLRNSVSRISLSFSFRKGSN+PPETGC
Sbjct: 1   MYILLGTAPPPTFLLSAPNSRPLILPFTNTRPLHLRNSVSRISLSFSFRKGSNVPPETGC 60

Query: 61  PVPPEQLPINEYQTLSTSFPFSWAAGDIVEYCSRLVATGASFALFIGLPVAWFGTVGVES 120
           PVPPEQLPINEYQTLSTSFPFSWAAGDIVEYCSRLVATGASFALFIGLPVAWFGTVGVES
Sbjct: 61  PVPPEQLPINEYQTLSTSFPFSWAAGDIVEYCSRLVATGASFALFIGLPVAWFGTVGVES 120

Query: 121 DPLKRFLCAVSSGILFVTIAVVRMYLGWAYVGNRLLSATVEYEETGWYDGQIWVKTAQVL 180
           DPLKRFLCAVSSGILFVTIAVVRMYLGWAYVGNRLLSATVEYEETGWYDGQIWVKTAQVL
Sbjct: 121 DPLKRFLCAVSSGILFVTIAVVRMYLGWAYVGNRLLSATVEYEETGWYDGQIWVKTAQVL 180

Query: 181 ARDRLLGSYTVKPVLNRLKYTLVSLAASLFVSIVVLINVDGGELLGPFLTGKSATDEGGG 240
           ARDRLLGSYTVKPVLNRLKYTLVSLAASLFVSIVVLIN+DGGELLGPF TGKSA +E GG
Sbjct: 181 ARDRLLGSYTVKPVLNRLKYTLVSLAASLFVSIVVLINIDGGELLGPFFTGKSAANEDGG 240

Query: 241 RVIPGVYSDESARSFEPDAFCGPGEHDLLH 271
           RV+PG+YSDESARSFEPDAFCGPGE DLLH
Sbjct: 241 RVVPGIYSDESARSFEPDAFCGPGELDLLH 270

[Close]

BLAST of PI0020838 vs. NCBI nr
Match: XP_004141315.1 (uncharacterized protein ycf36 [Cucumis sativus] >KGN55327.1 hypothetical protein Csa_012326 [Cucumis sativus])

HSP 1 Score: 501.9 bits (1291), Expect = 3.4e-138
Identity = 249/269 (92.57%), Postives = 256/269 (95.17%), Query Frame = 0


Query: 1   MNILPGRVPPPNFLLSAPNSRPLISPFTNTRPLHLRNSVSRISLSFSFRKGSNMPPETGC 60
           M ILPG   PP FLLS PNSRPLISPFTNTR LHLRNSVSR+ LSFSFRKGSN+PPETGC
Sbjct: 1   MYILPGSASPPTFLLSVPNSRPLISPFTNTRLLHLRNSVSRMPLSFSFRKGSNVPPETGC 60

Query: 61  PVPPEQLPINEYQTLSTSFPFSWAAGDIVEYCSRLVATGASFALFIGLPVAWFGTVGVES 120
           PVPPEQLPINEYQTLS SFPFSWAAGDIVE+CSRLVATGASFALFIGLPVAWFGTVGVES
Sbjct: 61  PVPPEQLPINEYQTLSASFPFSWAAGDIVEFCSRLVATGASFALFIGLPVAWFGTVGVES 120

Query: 121 DPLKRFLCAVSSGILFVTIAVVRMYLGWAYVGNRLLSATVEYEETGWYDGQIWVKTAQVL 180
           DPLK  LCAVSSGILFVTIAV+RMYLGWAYVGNRLLSATVEYEETGWYDGQIWVKTAQVL
Sbjct: 121 DPLKLSLCAVSSGILFVTIAVLRMYLGWAYVGNRLLSATVEYEETGWYDGQIWVKTAQVL 180

Query: 181 ARDRLLGSYTVKPVLNRLKYTLVSLAASLFVSIVVLINVDGGELLGPFLTGKSATDEGGG 240
           ARDRLLGSYTVKPVLNRLKYTLVSLAASLFVSIVVLIN+DGGELLGPF TGKSA ++GGG
Sbjct: 181 ARDRLLGSYTVKPVLNRLKYTLVSLAASLFVSIVVLINIDGGELLGPFFTGKSAANDGGG 240

Query: 241 RVIPGVYSDESARSFEPDAFCGPGEHDLL 270
           RVIPGVYSDESARSFEPDAFCGPGEHDLL
Sbjct: 241 RVIPGVYSDESARSFEPDAFCGPGEHDLL 269

[Close]

BLAST of PI0020838 vs. NCBI nr
Match: XP_038898552.1 (uncharacterized protein ycf36 isoform X4 [Benincasa hispida])

HSP 1 Score: 493.8 bits (1270), Expect = 9.4e-136
Identity = 245/267 (91.76%), Postives = 252/267 (94.38%), Query Frame = 0


Query: 3   ILPGRVPPPNFLLSAPNSRPLISPFTNTRPLHLRNSVSRISLSFSFRKGSNMPPETGCPV 62
           ILPG+ PP  FL S PNSRP ISPF N  PLHLRNSVSRISLSFSFRKGSNMPPETGCPV
Sbjct: 7   ILPGKAPPRTFLPSGPNSRPSISPFKNPGPLHLRNSVSRISLSFSFRKGSNMPPETGCPV 66

Query: 63  PPEQLPINEYQTLSTSFPFSWAAGDIVEYCSRLVATGASFALFIGLPVAWFGTVGVESDP 122
           PPEQLPINEYQTLSTSFPFSWAAGDIVEYCSRLVATGASFALFIGLPVAWFGTVGVESDP
Sbjct: 67  PPEQLPINEYQTLSTSFPFSWAAGDIVEYCSRLVATGASFALFIGLPVAWFGTVGVESDP 126

Query: 123 LKRFLCAVSSGILFVTIAVVRMYLGWAYVGNRLLSATVEYEETGWYDGQIWVKTAQVLAR 182
           LKRFLCAVSSGILFVTIAVVRMYLGWAYVGNRLLSATVEYEETGWYDGQIWVKTAQVLAR
Sbjct: 127 LKRFLCAVSSGILFVTIAVVRMYLGWAYVGNRLLSATVEYEETGWYDGQIWVKTAQVLAR 186

Query: 183 DRLLGSYTVKPVLNRLKYTLVSLAASLFVSIVVLINVDGGELLGPFLTGKSATDEGGGRV 242
           DRLLGSYTVKPVL+RLKYTLVSLAASLFVSIVVL+N+DGG+LLGPF TGK A D+G GRV
Sbjct: 187 DRLLGSYTVKPVLSRLKYTLVSLAASLFVSIVVLVNIDGGQLLGPFFTGKYAADDGSGRV 246

Query: 243 IPGVYSDESARSFEPDAFCGPGEHDLL 270
           IPGVYSDESARSFEPDAFCG GE DL+
Sbjct: 247 IPGVYSDESARSFEPDAFCGAGEADLV 273

[Close]

BLAST of PI0020838 vs. NCBI nr
Match: XP_038898550.1 (uncharacterized protein ycf36 isoform X2 [Benincasa hispida])

HSP 1 Score: 487.6 bits (1254), Expect = 6.7e-134
Identity = 245/272 (90.07%), Postives = 252/272 (92.65%), Query Frame = 0


Query: 3   ILPGRVPPPNFLLSAPNSRPLISPFTNTRPLHLRNSVSRISLSFSFRKGSNMPPETGCPV 62
           ILPG+ PP  FL S PNSRP ISPF N  PLHLRNSVSRISLSFSFRKGSNMPPETGCPV
Sbjct: 7   ILPGKAPPRTFLPSGPNSRPSISPFKNPGPLHLRNSVSRISLSFSFRKGSNMPPETGCPV 66

Query: 63  PPEQLPINEYQTLSTSFPFSWAAGDIVEYCSRLVATGASFALFIGLPVAWFGTVGVESDP 122
           PPEQLPINEYQTLSTSFPFSWAAGDIVEYCSRLVATGASFALFIGLPVAWFGTVGVESDP
Sbjct: 67  PPEQLPINEYQTLSTSFPFSWAAGDIVEYCSRLVATGASFALFIGLPVAWFGTVGVESDP 126

Query: 123 LKRFLCAVSSGILFVTIAVVRMYLGWAYVGNRLLSATVEY-----EETGWYDGQIWVKTA 182
           LKRFLCAVSSGILFVTIAVVRMYLGWAYVGNRLLSATVEY     EETGWYDGQIWVKTA
Sbjct: 127 LKRFLCAVSSGILFVTIAVVRMYLGWAYVGNRLLSATVEYFLYTDEETGWYDGQIWVKTA 186

Query: 183 QVLARDRLLGSYTVKPVLNRLKYTLVSLAASLFVSIVVLINVDGGELLGPFLTGKSATDE 242
           QVLARDRLLGSYTVKPVL+RLKYTLVSLAASLFVSIVVL+N+DGG+LLGPF TGK A D+
Sbjct: 187 QVLARDRLLGSYTVKPVLSRLKYTLVSLAASLFVSIVVLVNIDGGQLLGPFFTGKYAADD 246

Query: 243 GGGRVIPGVYSDESARSFEPDAFCGPGEHDLL 270
           G GRVIPGVYSDESARSFEPDAFCG GE DL+
Sbjct: 247 GSGRVIPGVYSDESARSFEPDAFCGAGEADLV 278

[Close]

BLAST of PI0020838 vs. NCBI nr
Match: XP_038898551.1 (uncharacterized protein ycf36 isoform X3 [Benincasa hispida])

HSP 1 Score: 487.6 bits (1254), Expect = 6.7e-134
Identity = 245/272 (90.07%), Postives = 252/272 (92.65%), Query Frame = 0


Query: 3   ILPGRVPPPNFLLSAPNSRPLISPFTNTRPLHLRNSVSRISLSFSFRKGSNMPPETGCPV 62
           ILPG+ PP  FL S PNSRP ISPF N  PLHLRNSVSRISLSFSFRKGSNMPPETGCPV
Sbjct: 7   ILPGKAPPRTFLPSGPNSRPSISPFKNPGPLHLRNSVSRISLSFSFRKGSNMPPETGCPV 66

Query: 63  PPEQLPINEYQTLSTSFPFSWAAGDIVEYCSRLVATGASFALFIGLPVAWFGTVGVESDP 122
           PPEQLPINEYQTLSTSFPFSWAAGDIVEYCSRLVATGASFALFIGLPVAWFGTVGVESDP
Sbjct: 67  PPEQLPINEYQTLSTSFPFSWAAGDIVEYCSRLVATGASFALFIGLPVAWFGTVGVESDP 126

Query: 123 LKRFLCAVSSGILFVTIAVVRMYLGWAYVGNRLLSATVEYEETGWYDG-----QIWVKTA 182
           LKRFLCAVSSGILFVTIAVVRMYLGWAYVGNRLLSATVEYEETGWYDG     QIWVKTA
Sbjct: 127 LKRFLCAVSSGILFVTIAVVRMYLGWAYVGNRLLSATVEYEETGWYDGQSLCLQIWVKTA 186

Query: 183 QVLARDRLLGSYTVKPVLNRLKYTLVSLAASLFVSIVVLINVDGGELLGPFLTGKSATDE 242
           QVLARDRLLGSYTVKPVL+RLKYTLVSLAASLFVSIVVL+N+DGG+LLGPF TGK A D+
Sbjct: 187 QVLARDRLLGSYTVKPVLSRLKYTLVSLAASLFVSIVVLVNIDGGQLLGPFFTGKYAADD 246

Query: 243 GGGRVIPGVYSDESARSFEPDAFCGPGEHDLL 270
           G GRVIPGVYSDESARSFEPDAFCG GE DL+
Sbjct: 247 GSGRVIPGVYSDESARSFEPDAFCGAGEADLV 278

[Close]

BLAST of PI0020838 vs. TAIR 10
Match: AT5G11840.1 (Protein of unknown function (DUF1230) )

HSP 1 Score: 285.4 bits (729), Expect = 4.7e-77
Identity = 149/261 (57.09%), Postives = 186/261 (71.26%), Query Frame = 0


Query: 17  APNSRPLISPFTNTRPLH--------LRNSVSRISLSFSFRKGSNMPPETGCPVPPEQLP 76
           +P +  L  P  + R LH        L++S+ +     S  +     PET CPVPPEQ P
Sbjct: 10  SPITSSLKPPSRHRRFLHHNLSPKTPLQSSLIKFGAENSEPQPPRPLPETDCPVPPEQQP 69

Query: 77  INEYQTLSTSFPFSWAAGDIVEYCSRLVATGASFALFIGLPVAWFGTVGVESDPLKRFLC 136
           INEYQ+LSTSFPFSWA+GD++EY +RL  TGASFA F+GLPV+WFG++G E +P+KR L 
Sbjct: 70  INEYQSLSTSFPFSWASGDLIEYSTRLFLTGASFAFFVGLPVSWFGSIGPEYEPVKRILA 129

Query: 137 AVSSGILFVTIAVVRMYLGWAYVGNRLLSATVEYEETGWYDGQIWVKTAQVLARDRLLGS 196
           A SSGI  VT+AVVRMYLGWAYVGNRLLSATVEYEETGWYDGQ+WVKT +VLARDRLLGS
Sbjct: 130 ASSSGIFVVTLAVVRMYLGWAYVGNRLLSATVEYEETGWYDGQVWVKTPEVLARDRLLGS 189

Query: 197 YTVKPVLNRLKYTLVSLAASLFVSIVVLINVDGGELLGPFLTGKSATDEGGGRVIPGVYS 256
           ++VKPVL RLK TLV L     +S++++IN+    +   + T +   D      IPG Y+
Sbjct: 190 FSVKPVLARLKNTLVILG----LSLILVINLGDSPIATSYRTYRDPRDR-SSLPIPGAYN 249

Query: 257 DESARSFEPDAFCGPGEHDLL 270
           DE+AR+FEP+AFCG    DLL
Sbjct: 250 DETARTFEPEAFCGEPSSDLL 265

[Close]

BLAST of PI0020838 vs. TAIR 10
Match: AT5G67370.1 (Protein of unknown function (DUF1230) )

HSP 1 Score: 141.7 bits (356), Expect = 8.4e-34
Identity = 80/176 (45.45%), Postives = 109/176 (61.93%), Query Frame = 0


Query: 43  SLSFSFRKGSNMPPETGCPVPPEQLPINEYQTLSTSFPFSWAAGDIVEYCSRLVATGASF 102
           S+SFS   G +  P +   VP +Q P+NEY +L     +SW      E+  RL       
Sbjct: 70  SMSFS---GQSWDPSSEIEVPSDQRPVNEYSSLKEGMLYSWGELGPSEFFIRLGGLWLVT 129

Query: 103 ALFIGLPVAWFGTVGVESDPLKRFLCAVSSGILF-VTIAVVRMYLGWAYVGNRLLSATVE 162
              +G+PVA   +     +PL RF+ A  +G LF V++ V+R+YLGW+YVG+RLLSA + 
Sbjct: 130 FTVLGVPVA-AASFNPSREPL-RFILAAGTGTLFLVSLIVLRIYLGWSYVGDRLLSAVIP 189

Query: 163 YEETGWYDGQIWVKTAQVLARDRLLGSYTVKPVLNRLKYTLVSLAASLFVSIVVLI 218
           YEE+GWYDGQ+WVK  +VLARDRLLGSY VKPV+  LK TL+   A L  + V+ +
Sbjct: 190 YEESGWYDGQMWVKPPEVLARDRLLGSYKVKPVIKMLKQTLIGTGALLVSAFVLFV 240

The following BLAST results are available for this feature:

BLAST of PI0020838 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FN15	1.2e-32	45.45	Protein CONSERVED IN THE GREEN LINEAGE AND DIATOMS 27, chloroplastic OS=Arabidop...	[more]
P48276	6.1e-29	44.83	Uncharacterized protein ycf36 OS=Cyanophora paradoxa OX=2762 GN=ycf36 PE=3 SV=1	[more]
P51273	3.7e-26	42.86	Uncharacterized protein ycf36 OS=Porphyra purpurea OX=2787 GN=ycf36 PE=3 SV=1	[more]
Q1XDL3	4.1e-25	41.25	Uncharacterized protein ycf36 OS=Pyropia yezoensis OX=2788 GN=ycf36 PE=3 SV=1	[more]
O78501	1.0e-20	38.57	Uncharacterized protein ycf36 OS=Guillardia theta OX=55529 GN=ycf36 PE=3 SV=1	[more]

BLAST of PI0020838 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3D958	3.2e-142	94.44	DUF1230 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]
A0A1S3BTX6	3.2e-142	94.44	uncharacterized protein ycf36 OS=Cucumis melo OX=3656 GN=LOC103493654 PE=4 SV=1	[more]
A0A0A0L3Z3	1.7e-138	92.57	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G646010 PE=4 SV=1	[more]
A0A6J1CQK2	8.3e-130	88.68	uncharacterized protein ycf36 OS=Momordica charantia OX=3673 GN=LOC111013808 PE=...	[more]
A0A6J1FDI1	7.0e-129	87.31	uncharacterized protein ycf36 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111...	[more]

BLAST of PI0020838 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008452715.1	6.7e-142	94.44	PREDICTED: uncharacterized protein ycf36 [Cucumis melo] >KAA0064494.1 DUF1230 do...	[more]
XP_004141315.1	3.4e-138	92.57	uncharacterized protein ycf36 [Cucumis sativus] >KGN55327.1 hypothetical protein...	[more]
XP_038898552.1	9.4e-136	91.76	uncharacterized protein ycf36 isoform X4 [Benincasa hispida]	[more]
XP_038898550.1	6.7e-134	90.07	uncharacterized protein ycf36 isoform X2 [Benincasa hispida]	[more]
XP_038898551.1	6.7e-134	90.07	uncharacterized protein ycf36 isoform X3 [Benincasa hispida]	[more]

BLAST of PI0020838 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G11840.1	4.7e-77	57.09	Protein of unknown function (DUF1230)	[more]
AT5G67370.1	8.4e-34	45.45	Protein of unknown function (DUF1230)	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR009631	CGLD27-like	PFAM	PF06799	DUF1230	coord: 60..203 e-value: 2.1E-54 score: 183.5
IPR009631	CGLD27-like	PANTHER	PTHR34214	FAMILY NOT NAMED	coord: 24..263
None	No IPR available	PANTHER	PTHR34214:SF1	OS05G0539900 PROTEIN	coord: 24..263

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0020838.1	PI0020838.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0009536	plastid