PI0020804 (gene) Melon (PI 482460) v1

Overview


Name	PI0020804
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	Villin-1
Location	chr07: 5926516 .. 5927166 (-)
RNA-Seq Expression	PI0020804
Synteny	PI0020804

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATTTTGACAAGAAAGTATTACAGGTGTCAGGTTCCCTAAATTCATCCTACTGTTATATTCTTCAAACTGGAACAGGCATCTTCACTTGGATTGGCAGTCTCTCTTCAACCAGAGACCATGAAATTCTAAACAGGATGGTGGAAATGATAAATGTAAGTGAACAGTTATGTAGGCAATATGACCGACAACTTTTTACTGACTAGAAATTGATGCAACTTGAATGAATTAATTGTTTGATATCATTTGCAGCCAACATGGCAACCTGTATCAATCAGGGAAGGGAGTGAGCCTGATTTATTATGGGAAGTACTTGATGGAAAGTCAGAGTATCAAAAGGGAAAGGAGGCCAAAGGGCCCATTGAAGATCCACATTTATTTGTCTCGAACATCAGCGAAGGTATTAGCAATGTTAAATCTTCTAATCTATTTTTTAGGGAAAATGCACCTCAGTTTGGTTGATTATTATTAAAATCCAAATTAGTACTGGAAAATGTCTAACAGTGGGTTGTGCTTGTTTGGTATTTTGGTGGAAATCTTCCTTTCAGGTGATTTCAAGGTATAGTCCTCTCGATGTTCTAGAAATGCATGCCATTGATGCGATTTTGGTGTTTGACATGCCAAAGTCCAATTGTAAAAGTCTCCTTTGA

mRNA sequence

ATGGATTTTGACAAGAAAGTATTACAGGTGTCAGGTTCCCTAAATTCATCCTACTGTTATATTCTTCAAACTGGAACAGGCATCTTCACTTGGATTGGCAGTCTCTCTTCAACCAGAGACCATGAAATTCTAAACAGGATGGTGGAAATGATAAATCCAACATGGCAACCTGTATCAATCAGGGAAGGGAGTGAGCCTGATTTATTATGGGAAGTACTTGATGGAAAGTCAGAGTATCAAAAGGGAAAGGAGGCCAAAGGGCCCATTGAAGATCCACATTTATTTGTCTCGAACATCAGCGAAGGTATTAGCAATGTGATTTCAAGGTATAGTCCTCTCGATGTTCTAGAAATGCATGCCATTGATGCGATTTTGGTGTTTGACATGCCAAAGTCCAATTGTAAAAGTCTCCTTTGA

Coding sequence (CDS)

ATGGATTTTGACAAGAAAGTATTACAGGTGTCAGGTTCCCTAAATTCATCCTACTGTTATATTCTTCAAACTGGAACAGGCATCTTCACTTGGATTGGCAGTCTCTCTTCAACCAGAGACCATGAAATTCTAAACAGGATGGTGGAAATGATAAATCCAACATGGCAACCTGTATCAATCAGGGAAGGGAGTGAGCCTGATTTATTATGGGAAGTACTTGATGGAAAGTCAGAGTATCAAAAGGGAAAGGAGGCCAAAGGGCCCATTGAAGATCCACATTTATTTGTCTCGAACATCAGCGAAGGTATTAGCAATGTGATTTCAAGGTATAGTCCTCTCGATGTTCTAGAAATGCATGCCATTGATGCGATTTTGGTGTTTGACATGCCAAAGTCCAATTGTAAAAGTCTCCTTTGA

Protein sequence

MDFDKKVLQVSGSLNSSYCYILQTGTGIFTWIGSLSSTRDHEILNRMVEMINPTWQPVSIREGSEPDLLWEVLDGKSEYQKGKEAKGPIEDPHLFVSNISEGISNVISRYSPLDVLEMHAIDAILVFDMPKSNCKSLL

Homology

[Close]

BLAST of PI0020804 vs. ExPASy Swiss-Prot
Match: O81643 (Villin-1 OS=Arabidopsis thaliana OX=3702 GN=VLN1 PE=2 SV=2)

HSP 1 Score: 113.2 bits (282), Expect = 2.3e-24
Identity = 60/134 (44.78%), Postives = 79/134 (58.96%), Query Frame = 0


Query: 10  VSGSLNSSYCYILQTGTGIFTWIGSLSSTRDHEILNRMVEMINPTWQPVSIREGSEPDLL 69
           V+ SLNSSY YILQ G   FTWIG LSS  DHE+L+RM+  ++ + QP+ IREG+E D  
Sbjct: 537 VATSLNSSYSYILQYGASAFTWIGKLSSDSDHEVLDRMLYFLDTSCQPIYIREGNETDTF 596

Query: 70  WEVLDGKSEYQKGKEAKGPIEDPHLFVSNISEGISNVISRYSPL-------DVLEMHAID 129
           W +L GKSEY K KE +  IE+PHLF  + S  +  V   Y+ +       DV  +    
Sbjct: 597 WNLLGGKSEYPKEKEMRKQIEEPHLFTCSCSSDVLKVKEIYNFVQDDLTTEDVFLLDCQS 656

Query: 130 AILVFDMPKSNCKS 137
            + V+    SN KS
Sbjct: 657 EVYVWIGSNSNIKS 670

[Close]

BLAST of PI0020804 vs. ExPASy Swiss-Prot
Match: B8AY58 (Villin-1 OS=Oryza sativa subsp. indica OX=39946 GN=VLN1 PE=3 SV=1)

HSP 1 Score: 109.4 bits (272), Expect = 3.3e-23
Identity = 48/93 (51.61%), Postives = 64/93 (68.82%), Query Frame = 0


Query: 11  SGSLNSSYCYILQTGTGIFTWIGSLSSTRDHEILNRMVEMINPTWQPVSIREGSEPDLLW 70
           + SLNSS+CYILQ G   FTW+GSLSS  DH +L+RM++ + P  Q + +REGSEPD  W
Sbjct: 534 ASSLNSSHCYILQAGGSFFTWLGSLSSPSDHNLLDRMMDKLCPLKQSLLVREGSEPDRFW 593

Query: 71  EVLDGKSEYQKGKEAKGPIEDPHLFVSNISEGI 104
           E L G+SEY K K+ K    DPHL+  +  +G+
Sbjct: 594 EALGGRSEYSKEKQVKDWPADPHLYTCHFEQGL 626

[Close]

BLAST of PI0020804 vs. ExPASy Swiss-Prot
Match: Q0DKN3 (Villin-1 OS=Oryza sativa subsp. japonica OX=39947 GN=VLN1 PE=2 SV=1)

HSP 1 Score: 107.5 bits (267), Expect = 1.3e-22
Identity = 47/93 (50.54%), Postives = 64/93 (68.82%), Query Frame = 0


Query: 11  SGSLNSSYCYILQTGTGIFTWIGSLSSTRDHEILNRMVEMINPTWQPVSIREGSEPDLLW 70
           + SLNSS+CYILQ G   FTW+GSLSS  DH +L+RM++ + P  Q + +REGSEPD  W
Sbjct: 534 ASSLNSSHCYILQAGGSFFTWLGSLSSPSDHNLLDRMMDKLCPLKQSLLVREGSEPDRFW 593

Query: 71  EVLDGKSEYQKGKEAKGPIEDPHLFVSNISEGI 104
           E L G+SEY + K+ K    DPHL+  +  +G+
Sbjct: 594 EALGGRSEYLREKQVKDWPADPHLYTCHFEQGL 626

[Close]

BLAST of PI0020804 vs. ExPASy Swiss-Prot
Match: Q67U26 (Villin-3 OS=Oryza sativa subsp. japonica OX=39947 GN=VLN3 PE=2 SV=2)

HSP 1 Score: 97.8 bits (242), Expect = 1.0e-19
Identity = 46/94 (48.94%), Postives = 60/94 (63.83%), Query Frame = 0


Query: 13  SLNSSYCYILQTGTGIFTWIGSLSSTRDHEILNRMVEMINPTWQPVSIREGSEPDLLWEV 72
           SLNSSYCY+L  G  +FTWIG+LSS+ D E+  R +++I P  Q   ++EGSE D  W++
Sbjct: 545 SLNSSYCYVLHDGDTLFTWIGNLSSSMDQELAERQLDVIKPNLQSRMLKEGSEYDQFWKL 604

Query: 73  LDGKSEYQKGKEAKGPIEDPHLFVSNISEGISNV 107
           L  KSEY   K AK    DPHLF    S+G+  V
Sbjct: 605 LGVKSEYPSQKIAKDQESDPHLFSCTFSKGVLKV 638

[Close]

BLAST of PI0020804 vs. ExPASy Swiss-Prot
Match: O65570 (Villin-4 OS=Arabidopsis thaliana OX=3702 GN=VLN4 PE=1 SV=1)

HSP 1 Score: 93.6 bits (231), Expect = 1.9e-18
Identity = 43/102 (42.16%), Postives = 61/102 (59.80%), Query Frame = 0


Query: 10  VSGSLNSSYCYILQTGTGIFTWIGSLSSTRDHEILNRMVEMINPTWQPVSIREGSEPDLL 69
           V+ SLNSSY YIL   + +FTW G+LS+  D E+  R +++I P  Q  + +EGSE +  
Sbjct: 540 VAASLNSSYYYILHNDSSVFTWAGNLSTATDQELAERQLDLIKPNQQSRAQKEGSESEQF 599

Query: 70  WEVLDGKSEYQKGKEAKGPIEDPHLFVSNISEGISNVISRYS 112
           WE+L GK+EY   K  K P  DPHLF    ++ +  V   Y+
Sbjct: 600 WELLGGKAEYSSQKLTKEPERDPHLFSCTFTKEVLKVTEIYN 641

[Close]

BLAST of PI0020804 vs. ExPASy TrEMBL
Match: A0A5A7V4K5 (Villin-1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold89G00720 PE=4 SV=1)

HSP 1 Score: 193.4 bits (490), Expect = 6.5e-46
Identity = 93/102 (91.18%), Postives = 95/102 (93.14%), Query Frame = 0


Query: 10  VSGSLNSSYCYILQTGTGIFTWIGSLSSTRDHEILNRMVEMINPTWQPVSIREGSEPDLL 69
           VSGSLNSSYCYILQTG  IFTWIGSLSSTRDHEIL+RMVEMINPTWQPVSIREGSEPDL 
Sbjct: 531 VSGSLNSSYCYILQTGKCIFTWIGSLSSTRDHEILDRMVEMINPTWQPVSIREGSEPDLF 590

Query: 70  WEVLDGKSEYQKGKEAKGPIEDPHLFVSNISEGISNVISRYS 112
           WEVLDGKSEYQKGKEAKGPIEDPHLFV NISEGISNV   Y+
Sbjct: 591 WEVLDGKSEYQKGKEAKGPIEDPHLFVLNISEGISNVKEVYN 632

[Close]

BLAST of PI0020804 vs. ExPASy TrEMBL
Match: A0A0A0KC54 (HP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G185860 PE=4 SV=1)

HSP 1 Score: 188.3 bits (477), Expect = 2.1e-44
Identity = 91/102 (89.22%), Postives = 93/102 (91.18%), Query Frame = 0


Query: 10  VSGSLNSSYCYILQTGTGIFTWIGSLSSTRDHEILNRMVEMINPTWQPVSIREGSEPDLL 69
           VSGSLNSSYCYILQTGT IFTWIGSLSSTRDHEIL+RMVEMINPTWQPVSIREGSEPDL 
Sbjct: 535 VSGSLNSSYCYILQTGTCIFTWIGSLSSTRDHEILDRMVEMINPTWQPVSIREGSEPDLF 594

Query: 70  WEVLDGKSEYQKGKEAKGPIEDPHLFVSNISEGISNVISRYS 112
           WEVLDGKSEYQKGKEAKGPIEDPHLFV NISEG   V   Y+
Sbjct: 595 WEVLDGKSEYQKGKEAKGPIEDPHLFVLNISEGDFKVKEIYN 636

[Close]

BLAST of PI0020804 vs. ExPASy TrEMBL
Match: A0A5D3CZ09 (Villin-1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold571G00640 PE=4 SV=1)

HSP 1 Score: 186.0 bits (471), Expect = 1.0e-43
Identity = 90/102 (88.24%), Postives = 92/102 (90.20%), Query Frame = 0


Query: 10  VSGSLNSSYCYILQTGTGIFTWIGSLSSTRDHEILNRMVEMINPTWQPVSIREGSEPDLL 69
           VSGSLNSSYCYILQTG  IFTWIGSLSSTRDHEIL+RMVEMINPTWQPVSIREGSEPDL 
Sbjct: 535 VSGSLNSSYCYILQTGKCIFTWIGSLSSTRDHEILDRMVEMINPTWQPVSIREGSEPDLF 594

Query: 70  WEVLDGKSEYQKGKEAKGPIEDPHLFVSNISEGISNVISRYS 112
           WEVLDGKSEYQKGKEAKGPIEDPHLFV NISEG   V   Y+
Sbjct: 595 WEVLDGKSEYQKGKEAKGPIEDPHLFVLNISEGDFKVKEVYN 636

[Close]

BLAST of PI0020804 vs. ExPASy TrEMBL
Match: A0A1S3CKK6 (villin-1 OS=Cucumis melo OX=3656 GN=LOC103502027 PE=4 SV=1)

HSP 1 Score: 186.0 bits (471), Expect = 1.0e-43
Identity = 90/102 (88.24%), Postives = 92/102 (90.20%), Query Frame = 0


Query: 10  VSGSLNSSYCYILQTGTGIFTWIGSLSSTRDHEILNRMVEMINPTWQPVSIREGSEPDLL 69
           VSGSLNSSYCYILQTG  IFTWIGSLSSTRDHEIL+RMVEMINPTWQPVSIREGSEPDL 
Sbjct: 536 VSGSLNSSYCYILQTGKCIFTWIGSLSSTRDHEILDRMVEMINPTWQPVSIREGSEPDLF 595

Query: 70  WEVLDGKSEYQKGKEAKGPIEDPHLFVSNISEGISNVISRYS 112
           WEVLDGKSEYQKGKEAKGPIEDPHLFV NISEG   V   Y+
Sbjct: 596 WEVLDGKSEYQKGKEAKGPIEDPHLFVLNISEGDFKVKEVYN 637

[Close]

BLAST of PI0020804 vs. ExPASy TrEMBL
Match: A0A6J1D3W7 (villin-1 OS=Momordica charantia OX=3673 GN=LOC111017031 PE=4 SV=1)

HSP 1 Score: 176.8 bits (447), Expect = 6.3e-41
Identity = 85/102 (83.33%), Postives = 89/102 (87.25%), Query Frame = 0


Query: 10  VSGSLNSSYCYILQTGTGIFTWIGSLSSTRDHEILNRMVEMINPTWQPVSIREGSEPDLL 69
           VS SLNSSYCYILQT T IFTWIGSLSSTRDHEIL+RMV+MINPTWQPVS+REGSEPDL 
Sbjct: 535 VSDSLNSSYCYILQTETCIFTWIGSLSSTRDHEILDRMVDMINPTWQPVSVREGSEPDLF 594

Query: 70  WEVLDGKSEYQKGKEAKGPIEDPHLFVSNISEGISNVISRYS 112
           WE L GKSEYQKGKEAKGPIEDPHLFV NISEG   V   Y+
Sbjct: 595 WETLGGKSEYQKGKEAKGPIEDPHLFVLNISEGDFKVKEIYN 636

[Close]

BLAST of PI0020804 vs. NCBI nr
Match: KAA0061837.1 (villin-1 [Cucumis melo var. makuwa])

HSP 1 Score: 193.4 bits (490), Expect = 1.3e-45
Identity = 93/102 (91.18%), Postives = 95/102 (93.14%), Query Frame = 0


Query: 10  VSGSLNSSYCYILQTGTGIFTWIGSLSSTRDHEILNRMVEMINPTWQPVSIREGSEPDLL 69
           VSGSLNSSYCYILQTG  IFTWIGSLSSTRDHEIL+RMVEMINPTWQPVSIREGSEPDL 
Sbjct: 531 VSGSLNSSYCYILQTGKCIFTWIGSLSSTRDHEILDRMVEMINPTWQPVSIREGSEPDLF 590

Query: 70  WEVLDGKSEYQKGKEAKGPIEDPHLFVSNISEGISNVISRYS 112
           WEVLDGKSEYQKGKEAKGPIEDPHLFV NISEGISNV   Y+
Sbjct: 591 WEVLDGKSEYQKGKEAKGPIEDPHLFVLNISEGISNVKEVYN 632

[Close]

BLAST of PI0020804 vs. NCBI nr
Match: XP_004143215.1 (villin-1 [Cucumis sativus] >KGN47088.1 hypothetical protein Csa_020762 [Cucumis sativus])

HSP 1 Score: 188.3 bits (477), Expect = 4.3e-44
Identity = 91/102 (89.22%), Postives = 93/102 (91.18%), Query Frame = 0


Query: 10  VSGSLNSSYCYILQTGTGIFTWIGSLSSTRDHEILNRMVEMINPTWQPVSIREGSEPDLL 69
           VSGSLNSSYCYILQTGT IFTWIGSLSSTRDHEIL+RMVEMINPTWQPVSIREGSEPDL 
Sbjct: 535 VSGSLNSSYCYILQTGTCIFTWIGSLSSTRDHEILDRMVEMINPTWQPVSIREGSEPDLF 594

Query: 70  WEVLDGKSEYQKGKEAKGPIEDPHLFVSNISEGISNVISRYS 112
           WEVLDGKSEYQKGKEAKGPIEDPHLFV NISEG   V   Y+
Sbjct: 595 WEVLDGKSEYQKGKEAKGPIEDPHLFVLNISEGDFKVKEIYN 636

[Close]

BLAST of PI0020804 vs. NCBI nr
Match: XP_008464046.1 (PREDICTED: villin-1 [Cucumis melo])

HSP 1 Score: 186.0 bits (471), Expect = 2.1e-43
Identity = 90/102 (88.24%), Postives = 92/102 (90.20%), Query Frame = 0


Query: 10  VSGSLNSSYCYILQTGTGIFTWIGSLSSTRDHEILNRMVEMINPTWQPVSIREGSEPDLL 69
           VSGSLNSSYCYILQTG  IFTWIGSLSSTRDHEIL+RMVEMINPTWQPVSIREGSEPDL 
Sbjct: 536 VSGSLNSSYCYILQTGKCIFTWIGSLSSTRDHEILDRMVEMINPTWQPVSIREGSEPDLF 595

Query: 70  WEVLDGKSEYQKGKEAKGPIEDPHLFVSNISEGISNVISRYS 112
           WEVLDGKSEYQKGKEAKGPIEDPHLFV NISEG   V   Y+
Sbjct: 596 WEVLDGKSEYQKGKEAKGPIEDPHLFVLNISEGDFKVKEVYN 637

[Close]

BLAST of PI0020804 vs. NCBI nr
Match: TYK15419.1 (villin-1 [Cucumis melo var. makuwa])

HSP 1 Score: 186.0 bits (471), Expect = 2.1e-43
Identity = 90/102 (88.24%), Postives = 92/102 (90.20%), Query Frame = 0


Query: 10  VSGSLNSSYCYILQTGTGIFTWIGSLSSTRDHEILNRMVEMINPTWQPVSIREGSEPDLL 69
           VSGSLNSSYCYILQTG  IFTWIGSLSSTRDHEIL+RMVEMINPTWQPVSIREGSEPDL 
Sbjct: 535 VSGSLNSSYCYILQTGKCIFTWIGSLSSTRDHEILDRMVEMINPTWQPVSIREGSEPDLF 594

Query: 70  WEVLDGKSEYQKGKEAKGPIEDPHLFVSNISEGISNVISRYS 112
           WEVLDGKSEYQKGKEAKGPIEDPHLFV NISEG   V   Y+
Sbjct: 595 WEVLDGKSEYQKGKEAKGPIEDPHLFVLNISEGDFKVKEVYN 636

[Close]

BLAST of PI0020804 vs. NCBI nr
Match: XP_038901595.1 (villin-1 isoform X2 [Benincasa hispida])

HSP 1 Score: 178.7 bits (452), Expect = 3.4e-41
Identity = 84/102 (82.35%), Postives = 90/102 (88.24%), Query Frame = 0


Query: 10  VSGSLNSSYCYILQTGTGIFTWIGSLSSTRDHEILNRMVEMINPTWQPVSIREGSEPDLL 69
           VS SLNSSYCYILQTG+ +FTWIGSLSSTRDHEIL+RMVEMINPTWQPVS+REGSEPDL 
Sbjct: 497 VSDSLNSSYCYILQTGSCVFTWIGSLSSTRDHEILDRMVEMINPTWQPVSVREGSEPDLF 556

Query: 70  WEVLDGKSEYQKGKEAKGPIEDPHLFVSNISEGISNVISRYS 112
           WE+L GKSEYQKGKE KGPIEDPHLFV NISEG   V   Y+
Sbjct: 557 WEILGGKSEYQKGKEVKGPIEDPHLFVLNISEGDFKVKEIYN 598

[Close]

BLAST of PI0020804 vs. TAIR 10
Match: AT2G29890.1 (villin-like 1 )

HSP 1 Score: 113.2 bits (282), Expect = 1.6e-25
Identity = 60/134 (44.78%), Postives = 79/134 (58.96%), Query Frame = 0


Query: 10  VSGSLNSSYCYILQTGTGIFTWIGSLSSTRDHEILNRMVEMINPTWQPVSIREGSEPDLL 69
           V+ SLNSSY YILQ G   FTWIG LSS  DHE+L+RM+  ++ + QP+ IREG+E D  
Sbjct: 537 VATSLNSSYSYILQYGASAFTWIGKLSSDSDHEVLDRMLYFLDTSCQPIYIREGNETDTF 596

Query: 70  WEVLDGKSEYQKGKEAKGPIEDPHLFVSNISEGISNVISRYSPL-------DVLEMHAID 129
           W +L GKSEY K KE +  IE+PHLF  + S  +  V   Y+ +       DV  +    
Sbjct: 597 WNLLGGKSEYPKEKEMRKQIEEPHLFTCSCSSDVLKVKEIYNFVQDDLTTEDVFLLDCQS 656

Query: 130 AILVFDMPKSNCKS 137
            + V+    SN KS
Sbjct: 657 EVYVWIGSNSNIKS 670

[Close]

BLAST of PI0020804 vs. TAIR 10
Match: AT2G29890.2 (villin-like 1 )

HSP 1 Score: 112.1 bits (279), Expect = 3.6e-25
Identity = 52/93 (55.91%), Postives = 65/93 (69.89%), Query Frame = 0


Query: 10  VSGSLNSSYCYILQTGTGIFTWIGSLSSTRDHEILNRMVEMINPTWQPVSIREGSEPDLL 69
           V+ SLNSSY YILQ G   FTWIG LSS  DHE+L+RM+  ++ + QP+ IREG+E D  
Sbjct: 537 VATSLNSSYSYILQYGASAFTWIGKLSSDSDHEVLDRMLYFLDTSCQPIYIREGNETDTF 596

Query: 70  WEVLDGKSEYQKGKEAKGPIEDPHLFVSNISEG 103
           W +L GKSEY K KE +  IE+PHLF  + S G
Sbjct: 597 WNLLGGKSEYPKEKEMRKQIEEPHLFTCSCSSG 629

[Close]

BLAST of PI0020804 vs. TAIR 10
Match: AT2G29890.3 (villin-like 1 )

HSP 1 Score: 112.1 bits (279), Expect = 3.6e-25
Identity = 52/93 (55.91%), Postives = 65/93 (69.89%), Query Frame = 0


Query: 10  VSGSLNSSYCYILQTGTGIFTWIGSLSSTRDHEILNRMVEMINPTWQPVSIREGSEPDLL 69
           V+ SLNSSY YILQ G   FTWIG LSS  DHE+L+RM+  ++ + QP+ IREG+E D  
Sbjct: 537 VATSLNSSYSYILQYGASAFTWIGKLSSDSDHEVLDRMLYFLDTSCQPIYIREGNETDTF 596

Query: 70  WEVLDGKSEYQKGKEAKGPIEDPHLFVSNISEG 103
           W +L GKSEY K KE +  IE+PHLF  + S G
Sbjct: 597 WNLLGGKSEYPKEKEMRKQIEEPHLFTCSCSSG 629

[Close]

BLAST of PI0020804 vs. TAIR 10
Match: AT4G30160.1 (villin 4 )

HSP 1 Score: 93.6 bits (231), Expect = 1.3e-19
Identity = 43/102 (42.16%), Postives = 61/102 (59.80%), Query Frame = 0


Query: 10  VSGSLNSSYCYILQTGTGIFTWIGSLSSTRDHEILNRMVEMINPTWQPVSIREGSEPDLL 69
           V+ SLNSSY YIL   + +FTW G+LS+  D E+  R +++I P  Q  + +EGSE +  
Sbjct: 540 VAASLNSSYYYILHNDSSVFTWAGNLSTATDQELAERQLDLIKPNQQSRAQKEGSESEQF 599

Query: 70  WEVLDGKSEYQKGKEAKGPIEDPHLFVSNISEGISNVISRYS 112
           WE+L GK+EY   K  K P  DPHLF    ++ +  V   Y+
Sbjct: 600 WELLGGKAEYSSQKLTKEPERDPHLFSCTFTKEVLKVTEIYN 641

[Close]

BLAST of PI0020804 vs. TAIR 10
Match: AT4G30160.2 (villin 4 )

HSP 1 Score: 92.0 bits (227), Expect = 3.9e-19
Identity = 42/97 (43.30%), Postives = 59/97 (60.82%), Query Frame = 0


Query: 10  VSGSLNSSYCYILQTGTGIFTWIGSLSSTRDHEILNRMVEMINPTWQPVSIREGSEPDLL 69
           V+ SLNSSY YIL   + +FTW G+LS+  D E+  R +++I P  Q  + +EGSE +  
Sbjct: 540 VAASLNSSYYYILHNDSSVFTWAGNLSTATDQELAERQLDLIKPNQQSRAQKEGSESEQF 599

Query: 70  WEVLDGKSEYQKGKEAKGPIEDPHLFVSNISEGISNV 107
           WE+L GK+EY   K  K P  DPHLF    ++ +  V
Sbjct: 600 WELLGGKAEYSSQKLTKEPERDPHLFSCTFTKEVLKV 636

The following BLAST results are available for this feature:

BLAST of PI0020804 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O81643	2.3e-24	44.78	Villin-1 OS=Arabidopsis thaliana OX=3702 GN=VLN1 PE=2 SV=2	[more]
B8AY58	3.3e-23	51.61	Villin-1 OS=Oryza sativa subsp. indica OX=39946 GN=VLN1 PE=3 SV=1	[more]
Q0DKN3	1.3e-22	50.54	Villin-1 OS=Oryza sativa subsp. japonica OX=39947 GN=VLN1 PE=2 SV=1	[more]
Q67U26	1.0e-19	48.94	Villin-3 OS=Oryza sativa subsp. japonica OX=39947 GN=VLN3 PE=2 SV=2	[more]
O65570	1.9e-18	42.16	Villin-4 OS=Arabidopsis thaliana OX=3702 GN=VLN4 PE=1 SV=1	[more]

BLAST of PI0020804 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7V4K5	6.5e-46	91.18	Villin-1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold89G00720 PE=4 S...	[more]
A0A0A0KC54	2.1e-44	89.22	HP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G185860 PE=4 SV=...	[more]
A0A5D3CZ09	1.0e-43	88.24	Villin-1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold571G00640 PE=4 ...	[more]
A0A1S3CKK6	1.0e-43	88.24	villin-1 OS=Cucumis melo OX=3656 GN=LOC103502027 PE=4 SV=1	[more]
A0A6J1D3W7	6.3e-41	83.33	villin-1 OS=Momordica charantia OX=3673 GN=LOC111017031 PE=4 SV=1	[more]

BLAST of PI0020804 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0061837.1	1.3e-45	91.18	villin-1 [Cucumis melo var. makuwa]	[more]
XP_004143215.1	4.3e-44	89.22	villin-1 [Cucumis sativus] >KGN47088.1 hypothetical protein Csa_020762 [Cucumis ...	[more]
XP_008464046.1	2.1e-43	88.24	PREDICTED: villin-1 [Cucumis melo]	[more]
TYK15419.1	2.1e-43	88.24	villin-1 [Cucumis melo var. makuwa]	[more]
XP_038901595.1	3.4e-41	82.35	villin-1 isoform X2 [Benincasa hispida]	[more]

BLAST of PI0020804 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G29890.1	1.6e-25	44.78	villin-like 1	[more]
AT2G29890.2	3.6e-25	55.91	villin-like 1	[more]
AT2G29890.3	3.6e-25	55.91	villin-like 1	[more]
AT4G30160.1	1.3e-19	42.16	villin 4	[more]
AT4G30160.2	3.9e-19	43.30	villin 4	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007122	Villin/Gelsolin	SMART	SM00262	VILL_6	coord: 1..76 e-value: 4.3E-4 score: 29.6
IPR007122	Villin/Gelsolin	PANTHER	PTHR11977	VILLIN	coord: 7..106
IPR029006	ADF-H/Gelsolin-like domain superfamily	GENE3D	3.40.20.10	Severin	coord: 5..83 e-value: 3.0E-16 score: 61.3
IPR007123	Gelsolin-like domain	PFAM	PF00626	Gelsolin	coord: 11..42 e-value: 3.7E-5 score: 23.5
IPR030010	Villin-1-like, plant	PANTHER	PTHR11977:SF25	VILLIN-1	coord: 7..106
None	No IPR available	SUPERFAMILY	55753	Actin depolymerizing proteins	coord: 10..85

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0020804.1	PI0020804.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0051693	actin filament capping
biological_process	GO:0051014	actin filament severing
cellular_component	GO:0015629	actin cytoskeleton
molecular_function	GO:0051015	actin filament binding