PI0020797 (gene) Melon (PI 482460) v1

Overview


Name	PI0020797
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	Plant transposase
Location	chr03: 18180620 .. 18181347 (-)
RNA-Seq Expression	PI0020797
Synteny	PI0020797

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAAGATGAAATGATAGAAATGAAAGCAATTATGTCATCTTATATAAAGAAACAAGTAAATTTTTTTTCCTTAAGTAACTTACATTCATTTTTTTCCTATTCGTGGTTAACTGTATTTTTTGTTTCATATGAAATTAATAGGTTGAACCAAGTGAGGAACTTTCAAATGCTAATGCAAGTGCACCTAAGCCAACAAATATTCCTCCAACTTGTCATATATCTTCTCCATCGGTAAATTTATTTATAATGGGATGGAAATTACTTTGATCTCATTATTTTCTTATTCTAGCTCCTCACATTTTTCTTTTCATTGAGTATCAATAACAACAGTTAAATAAAGTGCAAGTTATTAGATTGGTATGGCTCAAAAGAGATTGTTGCAGAAGGACGATGGTCTTCTAATGATCCAACTGCTCTTGTTCATCACATTCCTATTGGTCCACATGCAGTTAGAGTATGGGTTGATGTATCAAAGAAATCCAATGCATATTTGTGGAGGCCAACATCAGAAATGACATGTATTGAAGAAGCTTTGGACAGTACGGTTGCATGGTCATCTGATAAGGTGACCATTGATGCGTTATTTTCTAATCTTATAATTTATCTACGACATTTATTAAGTTTCTCTATATTTGCTTCATATCCACTATTATTGGTGTCTTCAAAATCATTTATTGATATACATTTTATAAATTTATGTAGGTGAATGAAATGGTGCCTTACTAG

mRNA sequence

ATGAAAGATGAAATGATAGAAATGAAAGCAATTATGTCATCTTATATAAAGAAACAAGTTGAACCAAGTGAGGAACTTTCAAATGCTAATGCAAGTGCACCTAAGCCAACAAATATTCCTCCAACTTGTCATATATCTTCTCCATCGGTGAATGAAATGGTGCCTTACTAG

Coding sequence (CDS)

ATGAAAGATGAAATGATAGAAATGAAAGCAATTATGTCATCTTATATAAAGAAACAAGTTGAACCAAGTGAGGAACTTTCAAATGCTAATGCAAGTGCACCTAAGCCAACAAATATTCCTCCAACTTGTCATATATCTTCTCCATCGGTGAATGAAATGGTGCCTTACTAG

Protein sequence

MKDEMIEMKAIMSSYIKKQVEPSEELSNANASAPKPTNIPPTCHISSPSVNEMVPY

Homology

[Close]

BLAST of PI0020797 vs. ExPASy TrEMBL
Match: A0A5A7V1K6 (Plant transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold22G001610 PE=4 SV=1)

HSP 1 Score: 62.8 bits (151), Expect = 5.3e-07
Identity = 36/51 (70.59%), Postives = 40/51 (78.43%), Query Frame = 0


Query: 1   MKDEMIEMKAIMSSYIKKQVEPSEELSNANASAPKPTNIPPTCHISSPSVN 52
           MKDEMIEMKA+M SY+KKQ EPSEELSNA AS  K  NIPP   + SPS+N
Sbjct: 334 MKDEMIEMKALMLSYLKKQTEPSEELSNATASVLKRLNIPP---MPSPSIN 381

[Close]

BLAST of PI0020797 vs. ExPASy TrEMBL
Match: A0A0A0M3T6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G703050 PE=4 SV=1)

HSP 1 Score: 61.6 bits (148), Expect = 1.2e-06
Identity = 35/51 (68.63%), Postives = 42/51 (82.35%), Query Frame = 0


Query: 1   MKDEMIEMKAIMSSYIKKQVEPSEELSNANASA-PKPTNIPPTCHISSPSV 51
           MK++MIE+KA+MSSY+KKQ EPSEELSNA AS   K  NIP TC +SSPS+
Sbjct: 124 MKEKMIEIKALMSSYLKKQAEPSEELSNATASVLIKRINIPLTCPMSSPSI 174

[Close]

BLAST of PI0020797 vs. ExPASy TrEMBL
Match: A0A5A7T097 (Plant transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold20G001590 PE=4 SV=1)

HSP 1 Score: 60.1 bits (144), Expect = 3.5e-06
Identity = 32/41 (78.05%), Postives = 34/41 (82.93%), Query Frame = 0


Query: 1   MKDEMIEMKAIMSSYIKKQVEPSEELSNANASAPKPTNIPP 42
           MKDEMIEMKA+M SY+KKQ EPSEELSNA AS  K  NIPP
Sbjct: 681 MKDEMIEMKALMLSYLKKQTEPSEELSNATASVLKQLNIPP 721

[Close]

BLAST of PI0020797 vs. ExPASy TrEMBL
Match: A0A5D3BAJ3 (Plant transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold110G002260 PE=4 SV=1)

HSP 1 Score: 60.1 bits (144), Expect = 3.5e-06
Identity = 32/41 (78.05%), Postives = 34/41 (82.93%), Query Frame = 0


Query: 1   MKDEMIEMKAIMSSYIKKQVEPSEELSNANASAPKPTNIPP 42
           MKDEMIEMKA+M SY+KKQ EPSEELSNA AS  K  NIPP
Sbjct: 76  MKDEMIEMKALMLSYLKKQTEPSEELSNATASVLKQLNIPP 116

[Close]

BLAST of PI0020797 vs. ExPASy TrEMBL
Match: A0A5D3DCM2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1702G00300 PE=4 SV=1)

HSP 1 Score: 59.3 bits (142), Expect = 5.9e-06
Identity = 35/49 (71.43%), Postives = 38/49 (77.55%), Query Frame = 0


Query: 1    MKDEMIEMKAIMSSYIKKQVEPSEELSNANASAPKPTNIPPTCHISSPS 50
            MKDEMIEMKA+M SY+KKQ EPSEELSNA AS  K  NIPP   + SPS
Sbjct: 1197 MKDEMIEMKALMLSYLKKQTEPSEELSNATASVLKRLNIPP---MPSPS 1242

[Close]

BLAST of PI0020797 vs. NCBI nr
Match: XP_038885269.1 (uncharacterized protein LOC120075715 [Benincasa hispida] >XP_038885270.1 uncharacterized protein LOC120075715 [Benincasa hispida])

HSP 1 Score: 65.9 bits (159), Expect = 1.3e-07
Identity = 37/46 (80.43%), Postives = 39/46 (84.78%), Query Frame = 0


Query: 3   DEMIEMKAIMSSYIKKQVEPSEELSNANASAPKPTNIPPTCHISSP 49
           +EMIEMKAIMS +IKKQVEPSEELSNA AS PK TNIP T  ISSP
Sbjct: 57  EEMIEMKAIMSCFIKKQVEPSEELSNAIASVPKATNIPSTFLISSP 102

[Close]

BLAST of PI0020797 vs. NCBI nr
Match: KAA0060366.1 (Plant transposase [Cucumis melo var. makuwa])

HSP 1 Score: 62.8 bits (151), Expect = 1.1e-06
Identity = 36/51 (70.59%), Postives = 40/51 (78.43%), Query Frame = 0


Query: 1   MKDEMIEMKAIMSSYIKKQVEPSEELSNANASAPKPTNIPPTCHISSPSVN 52
           MKDEMIEMKA+M SY+KKQ EPSEELSNA AS  K  NIPP   + SPS+N
Sbjct: 334 MKDEMIEMKALMLSYLKKQTEPSEELSNATASVLKRLNIPP---MPSPSIN 381

[Close]

BLAST of PI0020797 vs. NCBI nr
Match: KAA0036852.1 (Plant transposase [Cucumis melo var. makuwa])

HSP 1 Score: 60.1 bits (144), Expect = 7.2e-06
Identity = 32/41 (78.05%), Postives = 34/41 (82.93%), Query Frame = 0


Query: 1   MKDEMIEMKAIMSSYIKKQVEPSEELSNANASAPKPTNIPP 42
           MKDEMIEMKA+M SY+KKQ EPSEELSNA AS  K  NIPP
Sbjct: 681 MKDEMIEMKALMLSYLKKQTEPSEELSNATASVLKQLNIPP 721

[Close]

BLAST of PI0020797 vs. NCBI nr
Match: TYJ95916.1 (Plant transposase [Cucumis melo var. makuwa])

HSP 1 Score: 60.1 bits (144), Expect = 7.2e-06
Identity = 32/41 (78.05%), Postives = 34/41 (82.93%), Query Frame = 0


Query: 1   MKDEMIEMKAIMSSYIKKQVEPSEELSNANASAPKPTNIPP 42
           MKDEMIEMKA+M SY+KKQ EPSEELSNA AS  K  NIPP
Sbjct: 76  MKDEMIEMKALMLSYLKKQTEPSEELSNATASVLKQLNIPP 116

[Close]

BLAST of PI0020797 vs. NCBI nr
Match: TYK07512.1 (uncharacterized protein E5676_scaffold1702G00300 [Cucumis melo var. makuwa] >TYK21220.1 uncharacterized protein E5676_scaffold359G00290 [Cucumis melo var. makuwa])

HSP 1 Score: 59.3 bits (142), Expect = 1.2e-05
Identity = 35/49 (71.43%), Postives = 38/49 (77.55%), Query Frame = 0


Query: 1    MKDEMIEMKAIMSSYIKKQVEPSEELSNANASAPKPTNIPPTCHISSPS 50
            MKDEMIEMKA+M SY+KKQ EPSEELSNA AS  K  NIPP   + SPS
Sbjct: 1197 MKDEMIEMKALMLSYLKKQTEPSEELSNATASVLKRLNIPP---MPSPS 1242

The following BLAST results are available for this feature:

BLAST of PI0020797 vs.


Match Name	E-value	Identity	Description

BLAST of PI0020797 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7V1K6	5.3e-07	70.59	Plant transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold22G001...	[more]
A0A0A0M3T6	1.2e-06	68.63	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G703050 PE=4 SV=1	[more]
A0A5A7T097	3.5e-06	78.05	Plant transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold20G001...	[more]
A0A5D3BAJ3	3.5e-06	78.05	Plant transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold110G00...	[more]
A0A5D3DCM2	5.9e-06	71.43	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]

BLAST of PI0020797 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038885269.1	1.3e-07	80.43	uncharacterized protein LOC120075715 [Benincasa hispida] >XP_038885270.1 unchara...	[more]
KAA0060366.1	1.1e-06	70.59	Plant transposase [Cucumis melo var. makuwa]	[more]
KAA0036852.1	7.2e-06	78.05	Plant transposase [Cucumis melo var. makuwa]	[more]
TYJ95916.1	7.2e-06	78.05	Plant transposase [Cucumis melo var. makuwa]	[more]
TYK07512.1	1.2e-05	71.43	uncharacterized protein E5676_scaffold1702G00300 [Cucumis melo var. makuwa] >TYK...	[more]

BLAST of PI0020797 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 23..49
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 23..56

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0020797.1	PI0020797.1	mRNA