PI0020740 (gene) Melon (PI 482460) v1

Overview


Name	PI0020740
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	VQ domain-containing protein
Location	chr05: 2093966 .. 2094704 (-)
RNA-Seq Expression	PI0020740
Synteny	PI0020740

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ACGAAACTCCCCTTTCTTAGCACATTACAAAATGCTACAAAAACCCCTCAAATTGTCTCATCACAAACAACAAATCAAATTTCCCTTTTAATTCCTCTCCCAATTTTTCCTCTTTTCTTTATGGAGAATTTCACAACCCTTCCTACTAATTTTCATCATAAAAAAGTTAGCCAAATTTCCAACAAAGCAACAATTGATCAACAAAACAAGCCCATCAAAGTGAAGTACATTTCCAGTCCCATGATGGTTAAAGCCAATAACGAGTCAGAATTTCGAGCCATAGTTCAAAAACTCACTGGCCAGAACTCTCCTGATCATGATGCTTTTGATCAATCAGTTGAAGATTTTAACCATGTTTTTTATCCGCCACCACCCTCGTCCACCCCCGGGGTTTCTTTCGATCCTAAGGATTGTCGTTATGATTCGGCCTCCGGTGATGTACTCTTCGATCGGATTGGGGATGGTGATGAAGAGCGGTACTGGCGAGGTGAAATGGACGGTTCTTTTTCTGGGTTTCAAGCTTCTTCTTGTGTGAATATATGGTGATGGAGATGAAGGAGAGGAAAAGATGATGGATGATGAGTGATATCATGGCTTTTTTAGCTTTAGTTTTTGTGGGACTTTGTATTTAGTATTTGAGAGGTTATATATGAATATATAGATTTGAATTTTCTTTTATTGATTATAGAACACATTGGTGAAATACTAATTACTACGTCTTTTATCGTAACCATTTTAT

mRNA sequence

ACGAAACTCCCCTTTCTTAGCACATTACAAAATGCTACAAAAACCCCTCAAATTGTCTCATCACAAACAACAAATCAAATTTCCCTTTTAATTCCTCTCCCAATTTTTCCTCTTTTCTTTATGGAGAATTTCACAACCCTTCCTACTAATTTTCATCATAAAAAAGTTAGCCAAATTTCCAACAAAGCAACAATTGATCAACAAAACAAGCCCATCAAAGTGAAGTACATTTCCAGTCCCATGATGGTTAAAGCCAATAACGAGTCAGAATTTCGAGCCATAGTTCAAAAACTCACTGGCCAGAACTCTCCTGATCATGATGCTTTTGATCAATCAGTTGAAGATTTTAACCATGTTTTTTATCCGCCACCACCCTCGTCCACCCCCGGGGTTTCTTTCGATCCTAAGGATTGTCGTTATGATTCGGCCTCCGGTGATGTACTCTTCGATCGGATTGGGGATGGTGATGAAGAGCGGTACTGGCGAGGTGAAATGGACGGTTCTTTTTCTGGGTTTCAAGCTTCTTCTTGTGTGAATATATGGTGATGGAGATGAAGGAGAGGAAAAGATGATGGATGATGAGTGATATCATGGCTTTTTTAGCTTTAGTTTTTGTGGGACTTTGTATTTAGTATTTGAGAGGTTATATATGAATATATAGATTTGAATTTTCTTTTATTGATTATAGAACACATTGGTGAAATACTAATTACTACGTCTTTTATCGTAACCATTTTAT

Coding sequence (CDS)

ATGGAGAATTTCACAACCCTTCCTACTAATTTTCATCATAAAAAAGTTAGCCAAATTTCCAACAAAGCAACAATTGATCAACAAAACAAGCCCATCAAAGTGAAGTACATTTCCAGTCCCATGATGGTTAAAGCCAATAACGAGTCAGAATTTCGAGCCATAGTTCAAAAACTCACTGGCCAGAACTCTCCTGATCATGATGCTTTTGATCAATCAGTTGAAGATTTTAACCATGTTTTTTATCCGCCACCACCCTCGTCCACCCCCGGGGTTTCTTTCGATCCTAAGGATTGTCGTTATGATTCGGCCTCCGGTGATGTACTCTTCGATCGGATTGGGGATGGTGATGAAGAGCGGTACTGGCGAGGTGAAATGGACGGTTCTTTTTCTGGGTTTCAAGCTTCTTCTTGTGTGAATATATGGTGA

Protein sequence

MENFTTLPTNFHHKKVSQISNKATIDQQNKPIKVKYISSPMMVKANNESEFRAIVQKLTGQNSPDHDAFDQSVEDFNHVFYPPPPSSTPGVSFDPKDCRYDSASGDVLFDRIGDGDEERYWRGEMDGSFSGFQASSCVNIW

Homology

[Close]

BLAST of PI0020740 vs. ExPASy Swiss-Prot
Match: Q9LDH1 (Sigma factor binding protein 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=SIB1 PE=1 SV=1)

HSP 1 Score: 51.2 bits (121), Expect = 1.1e-05
Identity = 45/140 (32.14%), Postives = 68/140 (48.57%), Query Frame = 0


Query: 9   TNFHHKKVSQISNKATIDQQ-----NKPIKVKYISSPMMVKANNESEFRAIVQKLTGQNS 68
           T+   KK S +S K+   ++     NKPIKV+YIS+PM V+    S+FR +VQ+LTGQ++
Sbjct: 12  TSLDKKKPSPVSRKSPKQKKKTTSTNKPIKVRYISNPMRVQ-TCASKFRELVQELTGQDA 71

Query: 69  PD---HDAFDQSVEDFNHVFYPPPPSSTPGVSFDPKDCRYDSASGDVLFDRIGDGDEERY 128
            D      +  S +D  H   PP  +  P V         DS   + L        E+ +
Sbjct: 72  VDLQPEPIYSPSSDD--HNLSPPAENLAPRVLHQEPFGERDSDCYEPL------NAEDMF 131

Query: 129 WRGEMDGSFSGFQASSCVNI 141
              +M   FSGF ++   N+
Sbjct: 132 LPDQMSAGFSGFFSNGFYNV 142

[Close]

BLAST of PI0020740 vs. ExPASy Swiss-Prot
Match: O80669 (Sigma factor binding protein 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=SIB2 PE=1 SV=1)

HSP 1 Score: 47.4 bits (111), Expect = 1.6e-04
Identity = 36/115 (31.30%), Postives = 55/115 (47.83%), Query Frame = 0


Query: 29  NKPIKVKYISSPMMVKANNESEFRAIVQKLTGQNSPDHDAFDQSVEDFNHVFYPPPPSST 88
           +KPIKV+YIS+PM V+    S+FR +VQ+LTGQ++ D                PP P++ 
Sbjct: 34  HKPIKVRYISNPMRVE-TCPSKFRELVQELTGQDAAD---------------LPPSPTTF 93

Query: 89  PGVSFD---PKDCRYDSASGDVLFDRIGDGDEERYWRGEMDGSFSGFQASSCVNI 141
             V        +   +   G+V  +     DEE +   +M    SGF +S   N+
Sbjct: 94  TAVDLHRPCESEMNLEPLDGEVRGEYYSPLDEEVFNAPQMSAGLSGFFSSGFYNV 132

[Close]

BLAST of PI0020740 vs. ExPASy TrEMBL
Match: A0A0A0LFF9 (VQ domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G010160 PE=4 SV=1)

HSP 1 Score: 256.1 bits (653), Expect = 8.3e-65
Identity = 127/142 (89.44%), Postives = 134/142 (94.37%), Query Frame = 0


Query: 1   MENFTTLPTNFHHKKVSQISNKATIDQQNKPIKVKYISSPMMVKANNESEFRAIVQKLTG 60
           MENFTTLP+NFHHKKVSQ+SNKATID QNKPIKVKYISSPMMVKANNESEFRAIVQKLTG
Sbjct: 1   MENFTTLPSNFHHKKVSQVSNKATIDHQNKPIKVKYISSPMMVKANNESEFRAIVQKLTG 60

Query: 61  QNSPDHDAFDQSVEDFNHVFYPPPPSSTPGVSFDPKDCRYDSASGDVLFDRIGDGDEERY 120
           Q+SPDHD  DQSV+DFNHVFYPPPPSS+PGVSFDPKDC  +SASGDVLFDRI DGDE RY
Sbjct: 61  QHSPDHD--DQSVQDFNHVFYPPPPSSSPGVSFDPKDCYGNSASGDVLFDRIEDGDEGRY 120

Query: 121 WRGEMD-GSFSGFQASSCVNIW 142
           WRGEM+ GSFSGFQASSCVNIW
Sbjct: 121 WRGEMELGSFSGFQASSCVNIW 140

[Close]

BLAST of PI0020740 vs. ExPASy TrEMBL
Match: A0A5A7VDH6 (VQ motif-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold285G001220 PE=4 SV=1)

HSP 1 Score: 238.8 bits (608), Expect = 1.4e-59
Identity = 127/146 (86.99%), Postives = 133/146 (91.10%), Query Frame = 0


Query: 1   MEN-FTTLPTNFHHKKVSQISNK-ATIDQQNKPIKVKYISSPMMVKANNESEFRAIVQKL 60
           MEN  TTLPT+FHH+KVSQ SNK  TIDQQNKPIKVKYISSPMMVKANNESEFRAIVQKL
Sbjct: 1   MENLITTLPTDFHHRKVSQNSNKPTTIDQQNKPIKVKYISSPMMVKANNESEFRAIVQKL 60

Query: 61  TGQNSPDHDA-FDQSVEDFNHVFYPPPP-SSTPGVSFDPKDCRYDSASGDVLF-DRIGDG 120
           TGQ+SPDHDA FDQSV+DFNH FYPPPP SSTPGVSFDP+DC Y SASGDVLF DRI DG
Sbjct: 61  TGQHSPDHDANFDQSVQDFNHAFYPPPPSSSTPGVSFDPRDC-YGSASGDVLFDDRIEDG 120

Query: 121 DEERYWRGEMDGSFSGFQASSCVNIW 142
           DE RYWRGEM+GSFSGFQASSCVNIW
Sbjct: 121 DEGRYWRGEMEGSFSGFQASSCVNIW 145

[Close]

BLAST of PI0020740 vs. ExPASy TrEMBL
Match: A0A6J1FJE0 (sigma factor binding protein 1, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111444440 PE=4 SV=1)

HSP 1 Score: 123.6 bits (309), Expect = 6.4e-25
Identity = 79/141 (56.03%), Postives = 94/141 (66.67%), Query Frame = 0


Query: 1   MENFTTLPTNFHHKKVSQISNKATIDQQNKPIKVKYISSPMMVKANNESEFRAIVQKLTG 60
           MEN  +LP +  H+K+   + +AT+   NKPIKVKYISSPMMVKANNE EFRAIVQKLTG
Sbjct: 1   MENLKSLPNHLRHEKLEASNYRATM--ANKPIKVKYISSPMMVKANNEFEFRAIVQKLTG 60

Query: 61  QNSPDHDAFDQSVEDFNHVFYPPPPSSTPGVSFDPKDCRYDSASGDVLFDRIGDGDEERY 120
           Q+S D DAFD+S ++FNH F PP  + T   SFD KDC YD  S D  +D IG       
Sbjct: 61  QHSAD-DAFDRSPQEFNHAFCPPSSTVT---SFDSKDC-YDLVSSDA-YDPIG------- 120

Query: 121 WRGEMDGSFSGFQASSCVNIW 142
             GEM  S  GFQA S V++W
Sbjct: 121 -VGEMKDSLYGFQA-SYVDVW 124

[Close]

BLAST of PI0020740 vs. ExPASy TrEMBL
Match: A0A6J1CME4 (sigma factor binding protein 1, chloroplastic-like OS=Momordica charantia OX=3673 GN=LOC111012954 PE=4 SV=1)

HSP 1 Score: 105.5 bits (262), Expect = 1.8e-19
Identity = 68/116 (58.62%), Postives = 80/116 (68.97%), Query Frame = 0


Query: 30  KPIKVKYISSPMMVKANNESEFRAIVQKLTGQNSPDHDAFDQSV----EDFNHVFYPPPP 89
           KPIKVKYIS+PMMVKAN+ESEFR IVQ+LTGQNSPD DAF+       E+ NH FYPPPP
Sbjct: 3   KPIKVKYISNPMMVKANSESEFREIVQRLTGQNSPD-DAFESPAFGGEEELNHAFYPPPP 62

Query: 90  SSTPGVSFDPKDCRYDSASGDVLFDRIGDGDEERYWRGEMDGSFSGFQASSCVNIW 142
           S+   VS DPK   Y   SG     ++G+  E  + + EM G FSGFQA SCVN +
Sbjct: 63  ST--AVSTDPKG-YYGLVSG-----KVGELGEGCFRQDEMQG-FSGFQA-SCVNTY 107

[Close]

BLAST of PI0020740 vs. ExPASy TrEMBL
Match: A0A1R3HNT0 (VQ motif-containing protein OS=Corchorus capsularis OX=210143 GN=CCACVL1_18001 PE=4 SV=1)

HSP 1 Score: 65.1 bits (157), Expect = 2.7e-07
Identity = 48/131 (36.64%), Postives = 64/131 (48.85%), Query Frame = 0


Query: 8   PTNFHHKKVSQISNKATIDQQNKPIKVKYISSPMMVKANNESEFRAIVQKLTGQNSPDHD 67
           P N HH     + +K     +  PIKV YI SP MVK +N  EFRAIVQ+LTG+NS   D
Sbjct: 4   PRNIHHHHYDDLKSKNPTKVKKNPIKVTYIDSPTMVKVSNADEFRAIVQELTGRNS---D 63

Query: 68  AFDQSVEDFNHVFYPPPPSSTPGVSFDPKDCRYDSASGDVLFDRIGDGDEERYWRGEMDG 127
             +Q   D +    P   ++    S    D R    S  V    + + DE+  WRG  + 
Sbjct: 64  TREQHSNDVHTTTIPKEEANQVHDSSAKVDDRILLDSFPVDMSSL-EFDEDFTWRGVQE- 123

Query: 128 SFSGFQASSCV 139
              GFQ+SS +
Sbjct: 124 DLLGFQSSSSI 129

[Close]

BLAST of PI0020740 vs. NCBI nr
Match: KAE8651551.1 (hypothetical protein Csa_019210 [Cucumis sativus])

HSP 1 Score: 256.1 bits (653), Expect = 1.7e-64
Identity = 127/142 (89.44%), Postives = 134/142 (94.37%), Query Frame = 0


Query: 1   MENFTTLPTNFHHKKVSQISNKATIDQQNKPIKVKYISSPMMVKANNESEFRAIVQKLTG 60
           MENFTTLP+NFHHKKVSQ+SNKATID QNKPIKVKYISSPMMVKANNESEFRAIVQKLTG
Sbjct: 1   MENFTTLPSNFHHKKVSQVSNKATIDHQNKPIKVKYISSPMMVKANNESEFRAIVQKLTG 60

Query: 61  QNSPDHDAFDQSVEDFNHVFYPPPPSSTPGVSFDPKDCRYDSASGDVLFDRIGDGDEERY 120
           Q+SPDHD  DQSV+DFNHVFYPPPPSS+PGVSFDPKDC  +SASGDVLFDRI DGDE RY
Sbjct: 61  QHSPDHD--DQSVQDFNHVFYPPPPSSSPGVSFDPKDCYGNSASGDVLFDRIEDGDEGRY 120

Query: 121 WRGEMD-GSFSGFQASSCVNIW 142
           WRGEM+ GSFSGFQASSCVNIW
Sbjct: 121 WRGEMELGSFSGFQASSCVNIW 140

[Close]

BLAST of PI0020740 vs. NCBI nr
Match: KAA0063579.1 (VQ motif-containing protein [Cucumis melo var. makuwa] >TYJ97906.1 VQ motif-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 238.8 bits (608), Expect = 2.8e-59
Identity = 127/146 (86.99%), Postives = 133/146 (91.10%), Query Frame = 0


Query: 1   MEN-FTTLPTNFHHKKVSQISNK-ATIDQQNKPIKVKYISSPMMVKANNESEFRAIVQKL 60
           MEN  TTLPT+FHH+KVSQ SNK  TIDQQNKPIKVKYISSPMMVKANNESEFRAIVQKL
Sbjct: 1   MENLITTLPTDFHHRKVSQNSNKPTTIDQQNKPIKVKYISSPMMVKANNESEFRAIVQKL 60

Query: 61  TGQNSPDHDA-FDQSVEDFNHVFYPPPP-SSTPGVSFDPKDCRYDSASGDVLF-DRIGDG 120
           TGQ+SPDHDA FDQSV+DFNH FYPPPP SSTPGVSFDP+DC Y SASGDVLF DRI DG
Sbjct: 61  TGQHSPDHDANFDQSVQDFNHAFYPPPPSSSTPGVSFDPRDC-YGSASGDVLFDDRIEDG 120

Query: 121 DEERYWRGEMDGSFSGFQASSCVNIW 142
           DE RYWRGEM+GSFSGFQASSCVNIW
Sbjct: 121 DEGRYWRGEMEGSFSGFQASSCVNIW 145

[Close]

BLAST of PI0020740 vs. NCBI nr
Match: XP_038877668.1 (sigma factor binding protein 1, chloroplastic-like [Benincasa hispida])

HSP 1 Score: 166.8 bits (421), Expect = 1.4e-37
Identity = 90/114 (78.95%), Postives = 93/114 (81.58%), Query Frame = 0


Query: 28  QNKPIKVKYISSPMMVKANNESEFRAIVQKLTGQNSPDHDAFDQSVEDFNHVFYPPPPSS 87
           QNKPIKVKYISSPMMVKANNESEFRAIVQKLTGQ+SP HDAFDQS EDFN VFY PPPSS
Sbjct: 3   QNKPIKVKYISSPMMVKANNESEFRAIVQKLTGQHSP-HDAFDQSAEDFNQVFY-PPPSS 62

Query: 88  TPGVSFDPKDCRYDSASGDVLFDRIGDGDEERYWRGEMDGSFSGFQASSCVNIW 142
               SFDPKDC Y SASGDVLFD          W+GEM+GSFSGFQASSCVN W
Sbjct: 63  MAAPSFDPKDC-YASASGDVLFD----------WQGEMEGSFSGFQASSCVNTW 103

[Close]

BLAST of PI0020740 vs. NCBI nr
Match: XP_022938305.1 (sigma factor binding protein 1, chloroplastic-like [Cucurbita moschata])

HSP 1 Score: 123.6 bits (309), Expect = 1.3e-24
Identity = 79/141 (56.03%), Postives = 94/141 (66.67%), Query Frame = 0


Query: 1   MENFTTLPTNFHHKKVSQISNKATIDQQNKPIKVKYISSPMMVKANNESEFRAIVQKLTG 60
           MEN  +LP +  H+K+   + +AT+   NKPIKVKYISSPMMVKANNE EFRAIVQKLTG
Sbjct: 1   MENLKSLPNHLRHEKLEASNYRATM--ANKPIKVKYISSPMMVKANNEFEFRAIVQKLTG 60

Query: 61  QNSPDHDAFDQSVEDFNHVFYPPPPSSTPGVSFDPKDCRYDSASGDVLFDRIGDGDEERY 120
           Q+S D DAFD+S ++FNH F PP  + T   SFD KDC YD  S D  +D IG       
Sbjct: 61  QHSAD-DAFDRSPQEFNHAFCPPSSTVT---SFDSKDC-YDLVSSDA-YDPIG------- 120

Query: 121 WRGEMDGSFSGFQASSCVNIW 142
             GEM  S  GFQA S V++W
Sbjct: 121 -VGEMKDSLYGFQA-SYVDVW 124

[Close]

BLAST of PI0020740 vs. NCBI nr
Match: KAG6586326.1 (Sigma factor binding protein 1, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 118.6 bits (296), Expect = 4.3e-23
Identity = 77/141 (54.61%), Postives = 93/141 (65.96%), Query Frame = 0


Query: 1   MENFTTLPTNFHHKKVSQISNKATIDQQNKPIKVKYISSPMMVKANNESEFRAIVQKLTG 60
           MEN  +LP +  H+K+   + +AT+   NKPIKVKYISSPMMVKA+NE EFRAIVQKLTG
Sbjct: 1   MENLKSLPNHLRHEKLEASNYRATM--ANKPIKVKYISSPMMVKASNEFEFRAIVQKLTG 60

Query: 61  QNSPDHDAFDQSVEDFNHVFYPPPPSSTPGVSFDPKDCRYDSASGDVLFDRIGDGDEERY 120
           Q+S D DAFD+S ++FNH F PP  + T   SFD KDC YD  S D  +D I        
Sbjct: 61  QHSAD-DAFDRSPQEFNHAFCPPSSTVT---SFDSKDC-YDLVSSDA-YDPIR------- 120

Query: 121 WRGEMDGSFSGFQASSCVNIW 142
             GEM  S  GFQA S V++W
Sbjct: 121 -VGEMKDSLYGFQA-SYVDVW 124

[Close]

BLAST of PI0020740 vs. TAIR 10
Match: AT3G56710.1 (sigma factor binding protein 1 )

HSP 1 Score: 51.2 bits (121), Expect = 7.8e-07
Identity = 45/140 (32.14%), Postives = 68/140 (48.57%), Query Frame = 0


Query: 9   TNFHHKKVSQISNKATIDQQ-----NKPIKVKYISSPMMVKANNESEFRAIVQKLTGQNS 68
           T+   KK S +S K+   ++     NKPIKV+YIS+PM V+    S+FR +VQ+LTGQ++
Sbjct: 12  TSLDKKKPSPVSRKSPKQKKKTTSTNKPIKVRYISNPMRVQ-TCASKFRELVQELTGQDA 71

Query: 69  PD---HDAFDQSVEDFNHVFYPPPPSSTPGVSFDPKDCRYDSASGDVLFDRIGDGDEERY 128
            D      +  S +D  H   PP  +  P V         DS   + L        E+ +
Sbjct: 72  VDLQPEPIYSPSSDD--HNLSPPAENLAPRVLHQEPFGERDSDCYEPL------NAEDMF 131

Query: 129 WRGEMDGSFSGFQASSCVNI 141
              +M   FSGF ++   N+
Sbjct: 132 LPDQMSAGFSGFFSNGFYNV 142

[Close]

BLAST of PI0020740 vs. TAIR 10
Match: AT2G41180.1 (VQ motif-containing protein )

HSP 1 Score: 47.4 bits (111), Expect = 1.1e-05
Identity = 36/115 (31.30%), Postives = 55/115 (47.83%), Query Frame = 0


Query: 29  NKPIKVKYISSPMMVKANNESEFRAIVQKLTGQNSPDHDAFDQSVEDFNHVFYPPPPSST 88
           +KPIKV+YIS+PM V+    S+FR +VQ+LTGQ++ D                PP P++ 
Sbjct: 34  HKPIKVRYISNPMRVE-TCPSKFRELVQELTGQDAAD---------------LPPSPTTF 93

Query: 89  PGVSFD---PKDCRYDSASGDVLFDRIGDGDEERYWRGEMDGSFSGFQASSCVNI 141
             V        +   +   G+V  +     DEE +   +M    SGF +S   N+
Sbjct: 94  TAVDLHRPCESEMNLEPLDGEVRGEYYSPLDEEVFNAPQMSAGLSGFFSSGFYNV 132

The following BLAST results are available for this feature:

BLAST of PI0020740 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LDH1	1.1e-05	32.14	Sigma factor binding protein 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN...	[more]
O80669	1.6e-04	31.30	Sigma factor binding protein 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN...	[more]

BLAST of PI0020740 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LFF9	8.3e-65	89.44	VQ domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G010160 PE=4 SV=...	[more]
A0A5A7VDH6	1.4e-59	86.99	VQ motif-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaf...	[more]
A0A6J1FJE0	6.4e-25	56.03	sigma factor binding protein 1, chloroplastic-like OS=Cucurbita moschata OX=3662...	[more]
A0A6J1CME4	1.8e-19	58.62	sigma factor binding protein 1, chloroplastic-like OS=Momordica charantia OX=367...	[more]
A0A1R3HNT0	2.7e-07	36.64	VQ motif-containing protein OS=Corchorus capsularis OX=210143 GN=CCACVL1_18001 P...	[more]

BLAST of PI0020740 vs. NCBI nr


Match Name	E-value	Identity	Description
KAE8651551.1	1.7e-64	89.44	hypothetical protein Csa_019210 [Cucumis sativus]	[more]
KAA0063579.1	2.8e-59	86.99	VQ motif-containing protein [Cucumis melo var. makuwa] >TYJ97906.1 VQ motif-cont...	[more]
XP_038877668.1	1.4e-37	78.95	sigma factor binding protein 1, chloroplastic-like [Benincasa hispida]	[more]
XP_022938305.1	1.3e-24	56.03	sigma factor binding protein 1, chloroplastic-like [Cucurbita moschata]	[more]
KAG6586326.1	4.3e-23	54.61	Sigma factor binding protein 1, chloroplastic, partial [Cucurbita argyrosperma s...	[more]

BLAST of PI0020740 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G56710.1	7.8e-07	32.14	sigma factor binding protein 1	[more]
AT2G41180.1	1.1e-05	31.30	VQ motif-containing protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008889	VQ	PFAM	PF05678	VQ	coord: 37..65 e-value: 3.6E-9 score: 35.9
IPR039335	Sigma factor binding protein 1/2	PANTHER	PTHR33624	SIGMA FACTOR BINDING PROTEIN 1, CHLOROPLASTIC	coord: 11..73
None	No IPR available	PANTHER	PTHR33624:SF17	VQ MOTIF PROTEIN	coord: 11..73

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0020740.1	PI0020740.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0051091	positive regulation of DNA-binding transcription factor activity