PI0020546 (gene) Melon (PI 482460) v1

Overview


Name	PI0020546
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	thylakoid membrane protein slr0575
Location	chr09: 20613881 .. 20624838 (+)
RNA-Seq Expression	PI0020546
Synteny	PI0020546

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TGTAAATTGGCGGGTTTAGAGAAACGAATCCCATTCTCGTTTCTTTCTAACCAACCGAGCTTCGCTTTTCCACTCCGTTCATCAAAGCTTCACAGATTCAACACAGAGATTCAATGTCAATCAGTGCAATATCTCCAACTCCAGGTCTTAGTACTTGCTCCCATGATCAATTCACTCTCTCCAATCGCCTTTCCCTTGTTTCTCTCCGTTTCTCCCGTCCTTACCGCACAATTTCCCTTCCCGGCGGTGGCAATTTCATCGGCAGAACCAACGTTCTTGTCCATTTTGAAACGAGAACGCTTCTGCAGGAGCCTCAGCGATTAGCTTTCACTTTCTCGACTAGAGCTGCTGATTCTACTCAGCCCTCTGCCGTTTCAGCTTCGCCGGATAAACCAGTAGTTACTGACGATGAATTCTCGCTTGCGAAAGTACGTTTCTGATTCTTTATGCTTATGAATTATTGAGAATATTGGCAATGGACACTCCTAGGTAGCACTTATATTGGAATTTGTTGATTATGTTTTATGTGCTGTTAGTGATTTTAAAGAAACGAGAGATGTTTGGGATAAATGTAGTGTTTAAATTGTGCGGGAGTAGAATTCTGTTTTCACGTGTCTTGAAAATTTTATGTGTTGTAGAGATTTGGATTTAAGATATGCTTTGATAATGATCTAAAATATTTGTTGGAATGCGTTGAGTTGAAAATATAAAACTACTCTCTCGTTCTAATCCTGGACGTAACAAACATCCTGTAGTTTATATTTTCTTTGATTGTCTATTTTGTTTCTGTTCTAACAATATTTTTATGATTAAAAGTCTACGCTGTTAAACTAGGACAAATTAATCATTTACAATGTTTCCAACGTTCCATTTGAAAAATATAGTATGCCGAAATTTATATGGAATAAATAAACTACGTAGGTACCAGATACTTTGTTATATCAATAAAATACTTATAGGAACTGGCAGGATGGTACCCCTGATTACAAATGTGAAGTAGTATCCAAGAGAATCGTGACAGTATATTGATTTTGATTGTTGCCTTTGAATGAATGCAATGTACAATTTCTTTTCTCATTATTGATGTACACACCTTTTGTCTTTGTGAATTGTGATTTAATTTCTCTTGGTCTATTTGTTCTGTTGTTGTGGTGTTTTACCATTTTGTTTTACAGGTTTCATTTGGTGTTATTGGCTTAGGTGTCGGGATTTCTTTGTTGTCGTAAGTTGTTTCCTCCTCAGGCTCAAAATTTGTAAATTTATAACTTAGACATTTAATCTGTTTTGGTTCTATAGGTATGGATTCGGGGCATACTTTAATATCCTCCCGGGATCTGAATGGTCTGCCATTATGCTAACATATGGCTTCCCTCTCGCTATTATTGGCATGGCTCTAAAGGTACATTTCTCTATTTATTCACCTTTTGCAGTGTAAGAATGGTTTAGCACAATAAATGTTGATTTGCTTCAGTAGCCACATCCATCTTATGATCGTTTTAGATTTTCTTTACCCTGTATATTATAGTTATAACTCGGTATCTTATCCAAATTCAAAAGTACCTAAAAGTTTCTATCTGGTGTTTTAAAGAAAGGTAGTGTCATTTTAGTGTTCAACGGCATTCTATGTTTCGTTGATTATTTCCTTTCTCAAATGGCCTTGCAGTGTTGCTTATTTTTGCCTTATTCCTTAACTTCATGAACTTGAGCTGAAAACGAAAAGAATTGATAGAGAGAATTAGGTAACTCATTCTAGCCTTTGAGTGTTTTGCAGTATGCTGAACTCAAACCAGTGCCATGCTTGACATACTTAGATGCTCAAAAACTGAGGGAAACATGCGCCACCCCAATTCTTAAACAGGTTTTTTCTTGGAACTTGATTCTTTCTAATGGCCGTGCTTGTAAAATATGTTGTAAACATATTCTCTTGTGATTGCTTGTTTTAATAGACCGGCCATTCTTGTACATTTATTTATTTGTTTGTTTATTTTATTTGAGAAGAATCTTATACATTTATTCTTATAGTGGGTGTAGAAGAACAAAATTGAAATTGGAATGTTTAGGAGAAACAAATTTGGGGCCAAAAGTGTGGGTAGCAATTGTACTTCGGTAGGAGGGCGGAAGAGAAAAGTGAAAAGGAGTTGCAGGTGTGGGAAGAATGGGAAAGACAGTCTGATTTTTAGCTCCTTGTGGAGAATTTATCAGAATTCTTGTTTTTTCTATTTATTTTTGCTTGTCATTTAGAATTTCCAGTTGAGACTTGTCATGTTTTTCTATTTACTGTTCTATGATATTTTGTTTATTTAGGTTTCTTCATCTGGTCAATTCAATTTTTAGGTTTGAACTTTCATGTTATTGATACTGTACTACTGCTTGGGAAAGCATGAATCTGTCGTGTTGTGTGATTATCATCTTTTCCACGTTATAAATGAAAAGTTATCAATTCATGCAGAAAGAACAAAAAGCTTGTCTTTTATTTCACTTTGACTTTGCTTCAAATAGTGCGCAACTTGCGAGTTTAACTTAAAATTGTTTCTAATACATTGTCATTCTGTATACACACAAGTTTCATTGTATAAATTGTTTCATATTTCTGATTACTTCTTAACGTTTTCACTAGGTAAGAGACGATGTTATTCGGTTCCGTTATGGGGATGAACAACACTTGGATGAGGCATTGAAACGGATTTTCCAGTATGGTCTGGTAAGTAAATTGGGGTTACTTGAATCATCTTTATCTGTGATCTTTGATTGCATTTTTACTTGCCAGTAATTTCACTTTTTTTCTTCTTTTGTCTGTTTCTTATTTGTGGATTCTTGTTACCTTTTTAGAATTATATCAATTCAAAAGACTCCTGCCTTATCAATTTAGAACTGAAAGTTGGCTTCACTTTTGCTAAGCCGTTGCATTGTTTTGAAACTAGAATTTCTATACACCATTAGATGCGAACTAGTACGTGGATCCCAGTTGTCTGAACTCCAATTCATGCTTGTCCCATCATAATTTTCAATTTTGGATCCAGTAAATATTCTAATACATAGGTCTAGGAAGGCACATTTTGATGTAATTTTGAAACTGATGTTAAATAATGTTGAGGTAGCCTCTTATCATCCATTTGTCCTCTTCTTGAAGGATGAAGTGTGGTATCCAGTGCTCAAAAGAACTCTTACAATCTCTACTGAATATGAAAGAGTATTTGAGGAGATTTAGAAGTTGTCACCATTATATAGGCTCTGCTATTTGACTCAATTGATAACGCCTAATATTGTAGTAACAGTGAACTAATTGAACAAAATAATTACTCAGCGGATTGATCAACAACTTAGAAGGCTGACTAGTTGGTAAATGTGACAAACAGAAAAAGATAAAGTACCATGCGAAACTAACTTTTAGACTGCACTACATATTGCTTATATTCTAGTTTTAGATGTCTGTCACATAACAGACGCCCAGGACTCCCAACATCCGTGGGACGCTTAAATAGACTCTTAAGAGGGTTAATAGTTATTATTTTGGCCCTTTACACAAATAAAAATATTAAATAAAATTTATGATGTTGAACAAAATATTATATTTCTTGTTTTGAAAATATAATTTTTTGGATCTATTTGCTCATGAATGTTATGTTCTTACAAGACATTATGCCATTTTGAACTGTGCTTCTCTGATTTTAAATTTTCCTAATGAGCCTTAGCATAAGATGGTGCATCATGGCTATGCATTTGATTACTTCAACTTCTCTTAGTTTTCGTGTGCTTCATATTGTATTCCAAATGTTAACATCTAATCCAAAAGTAAACTTATGTCAACTTTTGAGCATCGGAATTATTGAACTTCATCAAAAGTATACAAATAGATGTCGGTTCTGACTCTCAACTTTTTGAAGATTACGTGCTGTCATGTCTATCTCCTCTGGCTGTACCCTACTTTCTAGCCAATTAGCAGTTCGATACACGATCAATTTATATATCATAATACTGTAAGATATGAACATTTATTGAACTCGTTTTAGTACTTTGGACGGATCAATTACTTCACCGCTGATTCATAAGTTTGTTCTTAGATTGTATTTTAGATTTTCAATGTACATTTCACTGTAACGTTTTGTATCTAAGGCTTCTCAGCTTACAAGTTCTCTTCTTTCCATCATTTATTCCCCTCATTTCTCTTTGTCTATTTCTTAACTTGGCCACCCTGCCTTTGATTACATGAAGAAGGCCAGGCAGATACACAAATACAGATAGAAGTTTTATTCACAATCTTAATGTGAAATTGTATCAAATGTGTATTCGAATCCTCATTTTTATGCTTTACATCAAGTTTTGTAAATTGATCAATGTTGCAATCTACTTTTGTATGCACAGGCTGGGGGAATTCCACGACGGAGTGCACCTATTTTGCAAAGTATACGTGAAGAAGTATGTTTGCATGACGTTGTTTTTGTCTCAGATATCATCTGTTGGCATATTTGTCACTGCAGTACTTATGACGCTTCTGATTGTACCAACTGGAAGTACTACTAAATACAATAGTATGATAACAACACTGATAATTCTAATATTAAGCCATTGGATACAATTCTAGGTCACAGAAGATGGAAAGTATTGTCTGGTCTTGGTGTTCGAAGCCAAAGCGTTGACATTGTCAGATTTTGAGCAAAGACAGGTAATTGACATATGCTCCTTTTTATTAAATGGTTGAAGAAAGAGTGCTGTCAGATTTCTTTACCTTCTTAATTCTAAAAAAGATCAATTTAATTGCTCAAAACCCAAATTTTGCTAATGCTGATGTAGTCATGATGGTAAATGTTTATCGTCATTCTAAAGGAATAATAGTTTTCGGAAGACTTGAAACTATGGGAAGATATTGTATTAAAAGATGAACCTATGATGAACTTGCAGGCCAAATTTGCTTCTTTCTTTGGACCAGGGATCACTGCAGAAGTTGGTGAGCTTAATGCCTTACCTAATTTATCTTTTTTCATTTCTTTTTCTGGTAATTATACCATTGTTTCTGAAATTTTCTTGAAACTTTTGCAGGGAAAGGAGAGAATGATTTGTATGAAGTCCGGCTTATTTCTAACACTATTCCCGGTGCTTCACCGTGATAAAGTATATGGTGTAATCAAATTCTGCTACATATAAAGGTTTCATTTAGTATACAAACTGCTGTCCACTTGTGAAGTTCTGGTAAGTATATATTCCTTTCAAAATCCCTGCAATCGAGATATTAAATTTGGTCTCTAATGTTTATAACACGTGAAAAAAATATAGACAAAGCTCAAAAGATTTAGAAAGAGAAAAAAAAAAAAAAAAAATGACATCCAAATGGGTTCCTTCCTGGATTTTAGAATTGCAAAATCACTTCATTCTTAAAATAGAAACAGGACATTCTACCTTACCTTTACCTATTCCGGAACTTTTTCACATGAGGCATGCATGGTTATTTGATTAACGAACTTTCCCTTAGAATAGTCACAGAATTATGAAATGTGCCCTTTCGAACTGGAAACTACGGCCTAAAAAGCACCCAATGCCGAACACGTCCCATAAACATGGTGCATTTCGGGCTTGTAAATGCCAATGTTGATTATAGTTTTTGCCACAGTTTACTAGAAGTACTAGAGCCTTATACTGTACATTGATACATAATCTTGACTTTCTTGTTTTGGAACAATAGCATTTATTGCCATTAAACTGTTCCCGTTGCCACATAATGTACTTTGAGGTCTCATTCATCACATTTCATTAAAGATGTTTGCTAATGAGTGATTCATGAATAATTAGTCTCAAATGAAGTCTTGCAAGTGTTTCTTACAGCTTCTCATGTGGGCTTTAGTATTAAATACTGTCTGTATTTAATCAACCTCATTTTATAACCATTCGGTTTTTTGAATACAAAAAAAAAATTAATAGATTGAAGCAGTGTTTTCTTAGTACAGTTGATGTAGGGATTTGGACGACTCATATTTCAGTTGTGCATTTGATTTTAAAAAACTAAATGGCTAAGTTCTTAAATCTTAGTTGACTACGTAGGTCTTTGAAATCCAAAGCTGGTGGCTTCTCTCCTCGCTTCTCCGGAAGTTCTCTTCGTTGTTTTCTGAAATTATTATCAACTTTCAGTAGCCATTAAAACTTAACTGGCACCAAAACGGGGAAGTGAGAAACACGTGTTTTTATGATCTTTTGCCTTTTGTATATTCTCTCAAGGGTAAAGTCCACGTGAAACTTGCATTACAGATATCCTATTGTCTCTTCTCTTCCACCTCCCCGCTTTCCAATTTTCCTAATCGAAGAGTTGGCATCTCCTTCAAATCACCTCTGTGGGTGAGAATGGAGTCGATTAAAGTCTTTAGTTCAGTTAAAATTAGACGGGCTGGAAAAATACTTGTATAGGAAAATTATTCCAAATTGTTGCTTTAGAAGGGGCATTTCTGAATGTTCACTAGGGGTAGGAATTGGAGATCGGGTTAAGTGTGAAAACATACATATTCGATGGGATGGTTCCTTTAACTCAAGTTGGAAGATATCTGCCGTTGAGGCATTGAGAAGATTCTTTTCATCCTGCCGTGTATGTATATATATTATCGCAAATATATGAATAATTGAAAATATTGTTTCACATTTGTTCTAATATATTTTTGGTTTTTTGTTTTGGTGAATTTGTTTAGCCTTTTTTCTAAAAGAGAAAAATATCTGTTTTTGGTGTTTGAACTTTTAGAAACTCAAAATTCACTTTTACTTTAAAAATCTGTACATAAAATTTCAACGGCTGAGACCAAATTTTAATGATTAATAAAACCTAATTAAGGTTCTTAATTAAAAATATCAAAATTAAGTCATCATATTGTTGTGAACATTCTAAGTTTCTAACTAATGCGATGTGTATGTTTTGATTTTTTTCTTGTTGTGATCTTAGTGGGTCCTCGATTGGGCTGTTTTATAAGCTCATGAAGCACTTGTATCGTGCAACTAGTCTGATCTTCTTTATTCCCTTACACTTCTTAGAGATCCACTTTACGATTTATGGTATTAGAATTGGATTTTGAATTGATAGAAGCTTCATTTCTTAGTAACCAGTGGAAGCTAATGAAATTAATAATCCTACTTATTAAAAGCTTTGCTTTTTTAAAGGTAAAGACAAAGGCATGCACGTGAAGTGAGGAGGTAAAGCTGCTCCCAACTTTTACCATCCCAATAAACGAAAAATAATATCACTCGGCACCAACACTAAAGCTGAGAACCACAAAACTAAAAGCCCTAAACTTTCTCCGCAGGCCTGAGGTCCCTCTCCATGATTGCTCTTAATTTCTTAACGCAAACACAAACCCCACTAACACCTGCAAAAATATGCCTGAAATACAAAGCGAATCTCCTTTTACCATTTTCTCAGTAACTTTTCAGCACCCTTTCAAATGAGGTAAAAAGTTTTTCTTTCTTGTTTTGTGTTTATCTCTCTGTCTTGTTCTCATCCATGACAGGCACCCACCTTGACTCCACGTTTGCTCGTTTGTACTGTTTCTATCTCCCTTTTCTTCTTTTGTCATCTCCTTTTCTTTTCTTGCTTTAATTGTCACCTGCACTTAAATTAGACTCATCACTGTTGTGTATGGGTCTGAGGAGAATGGGATATCTCTTATATTTGCTAATATAGGCATTGTCATCTGTGAACATGACCCTTACGGAAATTTGTAGAAAATGCTCAAACTTTACTAAACACCTGGGGTTTAAGAAAGAGAGAAATGCAGTATCTCTGTGTTGAAATCAAATTTAATGCCCAAAATGAGAAGATTAGCCACGTGAAGGACTGTACAACTAAATGATCTTTTGAGCCCCATACATTTCATTGTGAAAGTGAAGTTTTGATTAATTTAGAGCTGATACCTTTTCCTCTCTAACTGAAAGGTATATTCTGTTGTTATTGGGGAGGAAAGGGAAAAAAAAACACTCAAACAAAGTTACAAATTATGACCAGCCATTTTGATTCTTACCAAACAATGTTTAAAGCCACTGGTGAAAAGATGCATACCAGTAACACATAAGCCACAAAGGGTCACTTCTTCTGCTCAACAATAACCTTTGAGAACTGTTTTTTCGTTTTTACTTTTTTGTTTCTTTTCACTTTTAGTGTTTCCCTTGAATCCCGGCCCTTTCACCTGTGGACTGATTTTGAGATTGTGCTTATTGATTTTGAGGTACATGCATGTGGATGTCTAATGAATGACAGATGCAATGATTCAGAGACTTTTCTTTTCATTATTTTAGCCATTTGACCATATCCTTCAAATGCATAACCATTTTTTCCAGAAAGAGAGAAATAAAGTAGAAATTTCAATATAAAGCAGCAGAAACTGTGAGAACCCATTTTGTATTTTGCAGGAAAGAATCTCTATGGGCTCCACAATAAAGCAAGTAGGGTGGGGATGGTTGTGGTAAGTAGGATTGTTAAATGTTTTGTAGTACAGAGTTTATGGTAGTTGGGAATTCGGAAATATGTTTTGTGAAATTGCCTTTGCTTCTGATACTGATATATTCTTGGTTAGAGTAGTCCTCCAATTTTTTTCTCTCTTCTTTTTTGTTTTCCCTTCTGATTGATTCTTTTTTGCTGTCCGGAAAATGCTTCCCACAAACAGAGACAACCACAACTGTATGAGTTGTTGGGAAGCAGACAACCATGGGAGAAAATCATAGGTCTGTAAGCTAGATAGAGCCTATAGGAATATGTGAAGAGCGTGGTCCCTTTTTTACTCTTACACTTCTCCATTTTGTTAGATCATTGATCTGAATCAGTCAAGCCTAATCTTGACGACCCCATTTGTAGAAACACACAATCAACGAGGAAGAAACTGAAACATCCAAATCATCACTGTTTCAACTCTTAGGTTTTGGGGAATGGGGTTAATCACCCTAAAATGTCTTCCTACATTTCTTAATTAGTTAGGTTTGCACTTTGTTTTAAGCTTTCCATTTCAAATTTTCCTTCTACTAAATCATTATTATCATTTGAAATATCATTGAATGTACTTACCACTTTCTCTAATTTCTTTTTAGGAATGGAATAAGAATTTGATGAACCAGTTTGTTCTTTCCCACATTCCTTCAACGATCTCTCTTTAATGGGAGGCGTCGAAGCGGGACTAGGACTTGTCGAACTTCTATCGGGTGGTGTGCTTTGAGTTCCCACATCCTTGGTTCTCATCCCTTCCATTTTCTTTTCTACAATTCAAACGATGAACTTTGTTTGATAATGAATCCAACTTCAAACAAACCTTTCAAAACTTTTTATAAGAAAAAAGACAACAAAAGTGATGATACCTGGAATTGGATAGTGATGAATTTCTTCTTCGTGTGGAAAACTAATTGGTCTTTCTTGGATTTGTCTAGAATTTGTAGAATAAACTAAAGGAGCAGACATGGTGATCCTAGTTCTGAAATTTCTGAATGACCTTGCACTAAGTGTTTTAGCTGATAAACACTCCATTGGAACTTCCCTGAAAGAGGATTGCAAATATATTTCTCTGCTTCATACCATTTTGAGTTCAAAGCAAATCCCTCTGGTGACAAACTTTCCCAACTATTATAACTTGACCTAGCTTGCAATGCTACAAAAAAGAAAAAAAAACATTCCTTTTATTTGCTTTTTCTCAACTCAAACCACAAAAAGGAGTGGTTCCATAGAGTCTTTGCACAAAATCTCTTACCTTTAAGAGCAGTAGTGAAAGAATAGGTTGATGGGTCAATTTCATCTATATAAAAGAATCCAAGAAATAAAAAGATGAGACTGAGAGAAAATCCATGACAGGAAAAAAAAAAAAAACTGACTTGAAACAGAAAAATAAAGAGGTACCTCTCATGGAGTAGCAGCCTGGGGAAGAAGCAGTGCTGGAAATGGTTAAGTTTGATCTAAAGGATCTTCCATCTTCTCTAAAGCTTCTTATATAAGAACCTGAAAACCTTCTAGAACTTGTGTTCTCACATTTGATCCTTGCTCTAACTGGCCGTTCTCTCAAATTCAACTCATCTGCTTCTTCTCTTCTTTGTGAACCATAATGAAATTGCTCCATTCTTTGAAGGAAATGAGCCACTAGTTGAATTTCAAGCCTTTTAAGCTTTCTTTCTTTCTTTCTAATATCACAACTCTTCTTTGTAGTTTTATAAGGCTAAATATTTTAACATTTTTATACTGTAAAAGCAAATATCATTAATTCCTGAACAATTGTCTCATATTTGTTTTTATCTGATTTGGTCTATCAACATTCTAATTGTTATTCCATATCTTAAAAAAAAAGGTGAATTCCTTTTTCCTAAATAAAACAATCATCTCTGTTACAGCCCAAATTGCTTAGTTCTCCATTTGCAAGACAAAACAAGTCCATTTCAACAATTTTCAGTCTCAATTATTGGTCTATATTGTTAGGATTCTGTTTCAAATCATGGGTCTCACATTAAGTTGTTGTATAGCTCAATATGTTTCCCATGCAATTGTCACTTTGTTTATGGTGTCTTCCTCCTTTGCAATTCCAACTTCCTTCCTAGTCTATTAACTTTGGATGTTGATGTCATGTCATCATCAAAACTTGTCCCAATTCTGTTCATACGGTTACGGTTGTTGATTTTTAAAACTTTCTTTCGTATAAGCGTAGATAGTCAAATGAGCATAGTTGAACTAACGTATACTATCATCTTCAGGTCTAAGATTCAATCTCTCATCTTATACAATTATAATAATAATATCTCAAAATAGGTCGGGTGAGAATTTTTATCAACTTATTGTCTTAATTTTTCTTAGAATAAATTATTTATTTGATTTCAATTCCATGTTTTGATAATTTCTTTAAGGTATTGAGTTATTCAATTCACACCATTTCATTTTTTTTTAACCCTATTTTAAAATTTATTACATTCATTTTCCATTAATTATGTATTTATTTGAGGGGGATCACATTAATTCTTATCTTGAC

mRNA sequence

TGTAAATTGGCGGGTTTAGAGAAACGAATCCCATTCTCGTTTCTTTCTAACCAACCGAGCTTCGCTTTTCCACTCCGTTCATCAAAGCTTCACAGATTCAACACAGAGATTCAATGTCAATCAGTGCAATATCTCCAACTCCAGGTCTTAGTACTTGCTCCCATGATCAATTCACTCTCTCCAATCGCCTTTCCCTTGTTTCTCTCCGTTTCTCCCGTCCTTACCGCACAATTTCCCTTCCCGGCGGTGGCAATTTCATCGGCAGAACCAACGTTCTTGTCCATTTTGAAACGAGAACGCTTCTGCAGGAGCCTCAGCGATTAGCTTTCACTTTCTCGACTAGAGCTGCTGATTCTACTCAGCCCTCTGCCGTTTCAGCTTCGCCGGATAAACCAGTAGTTACTGACGATGAATTCTCGCTTGCGAAAGTTTCATTTGGTGTTATTGGCTTAGGTGTCGGGATTTCTTTGTTGTCGTATGGATTCGGGGCATACTTTAATATCCTCCCGGGATCTGAATGGTCTGCCATTATGCTAACATATGGCTTCCCTCTCGCTATTATTGGCATGGCTCTAAAGTATGCTGAACTCAAACCAGTGCCATGCTTGACATACTTAGATGCTCAAAAACTGAGGGAAACATGCGCCACCCCAATTCTTAAACAGGTAAGAGACGATGTTATTCGGTTCCGTTATGGGGATGAACAACACTTGGATGAGGCATTGAAACGGATTTTCCAGTATGGTCTGGCTGGGGGAATTCCACGACGGAGTGCACCTATTTTGCAAAGTATACGTGAAGAAGTCACAGAAGATGGAAAGTATTGTCTGGTCTTGGTGTTCGAAGCCAAAGCGTTGACATTGTCAGATTTTGAGCAAAGACAGGCCAAATTTGCTTCTTTCTTTGGACCAGGGATCACTGCAGAAGTTGGGAAAGGAGAGAATGATTTGTATGAAGTCCGGCTTATTTCTAACACTATTCCCGGTGCTTCACCGTGATAAAGTATATGGTGTAATCAAATTCTGCTACATATAAAGGTTTCATTTAGTATACAAACTGCTGTCCACTTGTGAAGTTCTGGTAAAGACAAAGGCATGCACGTGAAGTGAGGAGGTAAAGCTGCTCCCAACTTTTACCATCCCAATAAACGAAAAATAATATCACTCGGCACCAACACTAAAGCTGAGAACCACAAAACTAAAAGCCCTAAACTTTCTCCGCAGGCCTGAGGTCCCTCTCCATGATTGCTCTTAATTTCTTAACGCAAACACAAACCCCACTAACACCTGCAAAAATATGCCTGAAATACAAAGCGAATCTCCTTTTACCATTTTCTCAGTAACTTTTCAGCACCCTTTCAAATGAGGTAAAAAGTTTTTCTTTCTTGTTTTGTGTTTATCTCTCTGTCTTGTTCTCATCCATGACAGGCACCCACCTTGACTCCACGTTTGCTCGTTTGTACTGTTTCTATCTCCCTTTTCTTCTTTTGTCATCTCCTTTTCTTTTCTTGCTTTAATTGTCACCTGCACTTAAATTAGACTCATCACTGTTGTGTATGGGTCTGAGGAGAATGGGATATCTCTTATATTTGCTAATATAGGCATTGTCATCTGTGAACATGACCCTTACGGAAATTTGTAGAAAATGCTCAAACTTTACTAAACACCTGGGGTTTAAGAAAGAGAGAAATGCAGTATCTCTGTGTTGAAATCAAATTTAATGCCCAAAATGAGAAGATTAGCCACGTGAAGGACTGTACAACTAAATGATCTTTTGAGCCCCATACATTTCATTGTGAAAGTGAAGTTTTGATTAATTTAGAGCTGATACCTTTTCCTCTCTAACTGAAAGGTATATTCTGTTGTTATTGGGGAGGAAAGGGAAAAAAAAACACTCAAACAAAGTTACAAATTATGACCAGCCATTTTGATTCTTACCAAACAATGTTTAAAGCCACTGGTGAAAAGATGCATACCAGTAACACATAAGCCACAAAGGGTCACTTCTTCTGCTCAACAATAACCTTTGAGAACTGTTTTTTCGTTTTTACTTTTTTGTTTCTTTTCACTTTTAGTGTTTCCCTTGAATCCCGGCCCTTTCACCTGTGGACTGATTTTGAGATTGTGCTTATTGATTTTGAGGTACATGCATGTGGATGTCTAATGAATGACAGATGCAATGATTCAGAGACTTTTCTTTTCATTATTTTAGCCATTTGACCATATCCTTCAAATGCATAACCATTTTTTCCAGAAAGAGAGAAATAAAGTAGAAATTTCAATATAAAGCAGCAGAAACTGTGAGAACCCATTTTGTATTTTGCAGGAAAGAATCTCTATGGGCTCCACAATAAAGCAAGTAGGGTGGGGATGGTTGTGGTAAGTAGGATTGTTAAATGTTTTGTAGTACAGAGTTTATGGTAGTTGGGAATTCGGAAATATGTTTTGTGAAATTGCCTTTGCTTCTGATACTGATATATTCTTGGTTAGAGTAGTCCTCCAATTTTTTTCTCTCTTCTTTTTTGTTTTCCCTTCTGATTGATTCTTTTTTGCTGTCCGGAAAATGCTTCCCACAAACAGAGACAACCACAACTGTATGAGTTGTTGGGAAGCAGACAACCATGGGAGAAAATCATAGGTCTGTAAGCTAGATAGAGCCTATAGGAATATGTGAAGAGCGTGGTCCCTTTTTTACTCTTACACTTCTCCATTTTGTTAGATCATTGATCTGAATCAGTCAAGCCTAATCTTGACGACCCCATTTGTAGAAACACACAATCAACGAGGAAGAAACTGAAACATCCAAATCATCACTGTTTCAACTCTTAGGTTTTGGGGAATGGGGTTAATCACCCTAAAATGTCTTCCTACATTTCTTAATTAGTTAGGTTTGCACTTTGTTTTAAGCTTTCCATTTCAAATTTTCCTTCTACTAAATCATTATTATCATTTGAAATATCATTGAATGTACTTACCACTTTCTCTAATTTCTTTTTAGGAATGGAATAAGAATTTGATGAACCAGTTTGTTCTTTCCCACATTCCTTCAACGATCTCTCTTTAATGGGAGGCGTCGAAGCGGGACTAGGACTTGTCGAACTTCTATCGGGTGGTGTGCTTTGAGTTCCCACATCCTTGGTTCTCATCCCTTCCATTTTCTTTTCTACAATTCAAACGATGAACTTTGTTTGATAATGAATCCAACTTCAAACAAACCTTTCAAAACTTTTTATAAGAAAAAAGACAACAAAAGTGATGATACCTGGAATTGGATAGTGATGAATTTCTTCTTCGTGTGGAAAACTAATTGGTCTTTCTTGGATTTGTCTAGAATTTGTAGAATAAACTAAAGGAGCAGACATGGTGATCCTAGTTCTGAAATTTCTGAATGACCTTGCACTAAGTGTTTTAGCTGATAAACACTCCATTGGAACTTCCCTGAAAGAGGATTGCAAATATATTTCTCTGCTTCATACCATTTTGAGTTCAAAGCAAATCCCTCTGGTGACAAACTTTCCCAACTATTATAACTTGACCTAGCTTGCAATGCTACAAAAAAGAAAAAAAAACATTCCTTTTATTTGCTTTTTCTCAACTCAAACCACAAAAAGGAGTGGTTCCATAGAGTCTTTGCACAAAATCTCTTACCTTTAAGAGCAGTAGTGAAAGAATAGGTTGATGGGTCAATTTCATCTATATAAAAGAATCCAAGAAATAAAAAGATGAGACTGAGAGAAAATCCATGACAGGAAAAAAAAAAAAAACTGACTTGAAACAGAAAAATAAAGAGGTACCTCTCATGGAGTAGCAGCCTGGGGAAGAAGCAGTGCTGGAAATGGTTAAGTTTGATCTAAAGGATCTTCCATCTTCTCTAAAGCTTCTTATATAAGAACCTGAAAACCTTCTAGAACTTGTGTTCTCACATTTGATCCTTGCTCTAACTGGCCGTTCTCTCAAATTCAACTCATCTGCTTCTTCTCTTCTTTGTGAACCATAATGAAATTGCTCCATTCTTTGAAGGAAATGAGCCACTAGTTGAATTTCAAGCCTTTTAAGCTTTCTTTCTTTCTTTCTAATATCACAACTCTTCTTTGTAGTTTTATAAGGCTAAATATTTTAACATTTTTATACTGTAAAAGCAAATATCATTAATTCCTGAACAATTGTCTCATATTTGTTTTTATCTGATTTGGTCTATCAACATTCTAATTGTTATTCCATATCTTAAAAAAAAAGGTGAATTCCTTTTTCCTAAATAAAACAATCATCTCTGTTACAGCCCAAATTGCTTAGTTCTCCATTTGCAAGACAAAACAAGTCCATTTCAACAATTTTCAGTCTCAATTATTGGTCTATATTGTTAGGATTCTGTTTCAAATCATGGGTCTCACATTAAGTTGTTGTATAGCTCAATATGTTTCCCATGCAATTGTCACTTTGTTTATGGTGTCTTCCTCCTTTGCAATTCCAACTTCCTTCCTAGTCTATTAACTTTGGATGTTGATGTCATGTCATCATCAAAACTTGTCCCAATTCTGTTCATACGGTTACGGTTGTTGATTTTTAAAACTTTCTTTCGTATAAGCGTAGATAGTCAAATGAGCATAGTTGAACTAACGTATACTATCATCTTCAGGTCTAAGATTCAATCTCTCATCTTATACAATTATAATAATAATATCTCAAAATAGGTCGGGTGAGAATTTTTATCAACTTATTGTCTTAATTTTTCTTAGAATAAATTATTTATTTGATTTCAATTCCATGTTTTGATAATTTCTTTAAGGTATTGAGTTATTCAATTCACACCATTTCATTTTTTTTTAACCCTATTTTAAAATTTATTACATTCATTTTCCATTAATTATGTATTTATTTGAGGGGGATCACATTAATTCTTATCTTGAC

Coding sequence (CDS)

ATGTCAATCAGTGCAATATCTCCAACTCCAGGTCTTAGTACTTGCTCCCATGATCAATTCACTCTCTCCAATCGCCTTTCCCTTGTTTCTCTCCGTTTCTCCCGTCCTTACCGCACAATTTCCCTTCCCGGCGGTGGCAATTTCATCGGCAGAACCAACGTTCTTGTCCATTTTGAAACGAGAACGCTTCTGCAGGAGCCTCAGCGATTAGCTTTCACTTTCTCGACTAGAGCTGCTGATTCTACTCAGCCCTCTGCCGTTTCAGCTTCGCCGGATAAACCAGTAGTTACTGACGATGAATTCTCGCTTGCGAAAGTTTCATTTGGTGTTATTGGCTTAGGTGTCGGGATTTCTTTGTTGTCGTATGGATTCGGGGCATACTTTAATATCCTCCCGGGATCTGAATGGTCTGCCATTATGCTAACATATGGCTTCCCTCTCGCTATTATTGGCATGGCTCTAAAGTATGCTGAACTCAAACCAGTGCCATGCTTGACATACTTAGATGCTCAAAAACTGAGGGAAACATGCGCCACCCCAATTCTTAAACAGGTAAGAGACGATGTTATTCGGTTCCGTTATGGGGATGAACAACACTTGGATGAGGCATTGAAACGGATTTTCCAGTATGGTCTGGCTGGGGGAATTCCACGACGGAGTGCACCTATTTTGCAAAGTATACGTGAAGAAGTCACAGAAGATGGAAAGTATTGTCTGGTCTTGGTGTTCGAAGCCAAAGCGTTGACATTGTCAGATTTTGAGCAAAGACAGGCCAAATTTGCTTCTTTCTTTGGACCAGGGATCACTGCAGAAGTTGGGAAAGGAGAGAATGATTTGTATGAAGTCCGGCTTATTTCTAACACTATTCCCGGTGCTTCACCGTGA

Protein sequence

MSISAISPTPGLSTCSHDQFTLSNRLSLVSLRFSRPYRTISLPGGGNFIGRTNVLVHFETRTLLQEPQRLAFTFSTRAADSTQPSAVSASPDKPVVTDDEFSLAKVSFGVIGLGVGISLLSYGFGAYFNILPGSEWSAIMLTYGFPLAIIGMALKYAELKPVPCLTYLDAQKLRETCATPILKQVRDDVIRFRYGDEQHLDEALKRIFQYGLAGGIPRRSAPILQSIREEVTEDGKYCLVLVFEAKALTLSDFEQRQAKFASFFGPGITAEVGKGENDLYEVRLISNTIPGASP

Homology

[Close]

BLAST of PI0020546 vs. ExPASy Swiss-Prot
Match: Q55403 (Thylakoid membrane protein slr0575 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) OX=1111708 GN=slr0575 PE=4 SV=1)

HSP 1 Score: 113.6 bits (283), Expect = 3.8e-24
Identity = 76/187 (40.64%), Postives = 105/187 (56.15%), Query Frame = 0


Query: 103 LAKVSFGVIGLGVGISLLSYGFGAYFNILPGSEWSAIMLTYGFPLAIIGMALKYAELKPV 162
           L K+S   +GL VG  L   GF AY   L  +  +     YG PL + G+ALK AELKP+
Sbjct: 2   LPKISLAAVGLTVGGILTITGFVAY--ALDYATLNLAGFFYGIPLVLGGLALKAAELKPI 61

Query: 163 PCLTYLDAQK---LRETCATPILKQVRDDVIRFRYGDEQHLDEALKRIFQYGLAGGIPRR 222
           P  +   ++K   LR   ATP   Q+R DV R+RYG E HLDE+L+R+   GL+     R
Sbjct: 62  P-FSQPTSEKIIALRNQLATPTQNQIRKDVTRYRYGQEAHLDESLERL---GLSPTDEER 121

Query: 223 SAPILQSIREEVTEDGKYCLVLVFEAKALTLSDFEQRQAKFASFFGPGITAEVGKGENDL 282
             P+L S+ E+  E GKY L L F +  ++L  ++++Q K A FFGP +   V + E  +
Sbjct: 122 --PVLTSLLEQDWE-GKYVLTLTFTSPFISLETWQEKQEKIAKFFGPDLEVTVAEPEEKV 179

Query: 283 YEVRLIS 287
             V LIS
Sbjct: 182 VTVNLIS 179

[Close]

BLAST of PI0020546 vs. ExPASy TrEMBL
Match: A0A0A0KVX1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G644000 PE=4 SV=1)

HSP 1 Score: 549.3 bits (1414), Expect = 9.9e-153
Identity = 278/294 (94.56%), Postives = 283/294 (96.26%), Query Frame = 0


Query: 1   MSISAISPTPGLSTCSHDQFTLSNRLSLVSLRFSRPYRTISLPGGGNFIGRTNVLVHFET 60
           MSI+AISPTPGLSTCSHDQFTLSNRLSLVSL FSRP RTISLPGG NFI RTNV VHFET
Sbjct: 1   MSITAISPTPGLSTCSHDQFTLSNRLSLVSLPFSRPNRTISLPGGANFIARTNVFVHFET 60

Query: 61  RTLLQEPQRLAFTFSTRAADSTQPSAVSASPDKPVVTDDEFSLAKVSFGVIGLGVGISLL 120
            TLL +P RLAF+FSTRAADSTQPSAVSASP K VVTDDEFSLAKVSFGVIGLGVG+SLL
Sbjct: 61  TTLLHKPHRLAFSFSTRAADSTQPSAVSASPGKAVVTDDEFSLAKVSFGVIGLGVGVSLL 120

Query: 121 SYGFGAYFNILPGSEWSAIMLTYGFPLAIIGMALKYAELKPVPCLTYLDAQKLRETCATP 180
           SYGFGAYFNILPGSEWSAIMLTYGFPLAIIGMALKYAELKPVPCLTYLDAQKLRETCATP
Sbjct: 121 SYGFGAYFNILPGSEWSAIMLTYGFPLAIIGMALKYAELKPVPCLTYLDAQKLRETCATP 180

Query: 181 ILKQVRDDVIRFRYGDEQHLDEALKRIFQYGLAGGIPRRSAPILQSIREEVTEDGKYCLV 240
           ILKQVRDDVIRFRYGDEQHLDEALKRIFQYGLAGGIPRRSAPILQSIREEVTEDGKYCLV
Sbjct: 181 ILKQVRDDVIRFRYGDEQHLDEALKRIFQYGLAGGIPRRSAPILQSIREEVTEDGKYCLV 240

Query: 241 LVFEAKALTLSDFEQRQAKFASFFGPGITAEVGKGENDLYEVRLISNTIPGASP 295
           LVFEAKALTLSDFE+RQAKFASFFGPGITAEVGKGENDLYEVRL SNTIPGASP
Sbjct: 241 LVFEAKALTLSDFEKRQAKFASFFGPGITAEVGKGENDLYEVRLTSNTIPGASP 294

[Close]

BLAST of PI0020546 vs. ExPASy TrEMBL
Match: A0A5A7TDN5 (Thylakoid membrane protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold169G001820 PE=4 SV=1)

HSP 1 Score: 547.7 bits (1410), Expect = 2.9e-152
Identity = 277/294 (94.22%), Postives = 284/294 (96.60%), Query Frame = 0


Query: 1   MSISAISPTPGLSTCSHDQFTLSNRLSLVSLRFSRPYRTISLPGGGNFIGRTNVLVHFET 60
           MSI+AISPTPGLST SH QFTLSNRLSL+SL FSRP R ISLPGGGNFI RTNV VHFET
Sbjct: 1   MSITAISPTPGLSTSSHHQFTLSNRLSLLSLPFSRPNRPISLPGGGNFIARTNVFVHFET 60

Query: 61  RTLLQEPQRLAFTFSTRAADSTQPSAVSASPDKPVVTDDEFSLAKVSFGVIGLGVGISLL 120
           +TLL +P RLAFTFSTRAADSTQPSAVSASPDK VVTDDEFSLAKVSFGVIGLGVG+SLL
Sbjct: 61  KTLLHKPHRLAFTFSTRAADSTQPSAVSASPDKAVVTDDEFSLAKVSFGVIGLGVGVSLL 120

Query: 121 SYGFGAYFNILPGSEWSAIMLTYGFPLAIIGMALKYAELKPVPCLTYLDAQKLRETCATP 180
           SYGFGAYFNILPGSEWSAIMLTYGFPLAIIGMALKYAELKPVPCLTYLDAQKLRETCATP
Sbjct: 121 SYGFGAYFNILPGSEWSAIMLTYGFPLAIIGMALKYAELKPVPCLTYLDAQKLRETCATP 180

Query: 181 ILKQVRDDVIRFRYGDEQHLDEALKRIFQYGLAGGIPRRSAPILQSIREEVTEDGKYCLV 240
           ILKQVRDDVIRFRYGDEQHLDEALKRIFQYGLAGGIPRRSAPIL+SIREEVTEDGKYCLV
Sbjct: 181 ILKQVRDDVIRFRYGDEQHLDEALKRIFQYGLAGGIPRRSAPILESIREEVTEDGKYCLV 240

Query: 241 LVFEAKALTLSDFEQRQAKFASFFGPGITAEVGKGENDLYEVRLISNTIPGASP 295
           LVFEAKALTLSDFEQRQAKFASFFGPGITAEVGKGENDLYEVRLISN+IPGASP
Sbjct: 241 LVFEAKALTLSDFEQRQAKFASFFGPGITAEVGKGENDLYEVRLISNSIPGASP 294

[Close]

BLAST of PI0020546 vs. ExPASy TrEMBL
Match: A0A1S3CAR1 (thylakoid membrane protein slr0575 OS=Cucumis melo OX=3656 GN=LOC103498589 PE=4 SV=1)

HSP 1 Score: 545.8 bits (1405), Expect = 1.1e-151
Identity = 276/294 (93.88%), Postives = 283/294 (96.26%), Query Frame = 0


Query: 1   MSISAISPTPGLSTCSHDQFTLSNRLSLVSLRFSRPYRTISLPGGGNFIGRTNVLVHFET 60
           MSI+AISPTPGLST SH QFTLSNRLSL+SL FSRP R I LPGGGNFI RTNV VHFET
Sbjct: 1   MSITAISPTPGLSTSSHHQFTLSNRLSLLSLPFSRPNRPIPLPGGGNFIARTNVFVHFET 60

Query: 61  RTLLQEPQRLAFTFSTRAADSTQPSAVSASPDKPVVTDDEFSLAKVSFGVIGLGVGISLL 120
           +TLL +P RLAFTFSTRAADSTQPSAVSASPDK VVTDDEFSLAKVSFGVIGLGVG+SLL
Sbjct: 61  KTLLHKPHRLAFTFSTRAADSTQPSAVSASPDKAVVTDDEFSLAKVSFGVIGLGVGVSLL 120

Query: 121 SYGFGAYFNILPGSEWSAIMLTYGFPLAIIGMALKYAELKPVPCLTYLDAQKLRETCATP 180
           SYGFGAYFNILPGSEWSAIMLTYGFPLAIIGMALKYAELKPVPCLTYLDAQKLRETCATP
Sbjct: 121 SYGFGAYFNILPGSEWSAIMLTYGFPLAIIGMALKYAELKPVPCLTYLDAQKLRETCATP 180

Query: 181 ILKQVRDDVIRFRYGDEQHLDEALKRIFQYGLAGGIPRRSAPILQSIREEVTEDGKYCLV 240
           ILKQVRDDVIRFRYGDEQHLDEALKRIFQYGLAGGIPRRSAPIL+SIREEVTEDGKYCLV
Sbjct: 181 ILKQVRDDVIRFRYGDEQHLDEALKRIFQYGLAGGIPRRSAPILESIREEVTEDGKYCLV 240

Query: 241 LVFEAKALTLSDFEQRQAKFASFFGPGITAEVGKGENDLYEVRLISNTIPGASP 295
           LVFEAKALTLSDFEQRQAKFASFFGPGITAEVGKGENDLYEVRLISN+IPGASP
Sbjct: 241 LVFEAKALTLSDFEQRQAKFASFFGPGITAEVGKGENDLYEVRLISNSIPGASP 294

[Close]

BLAST of PI0020546 vs. ExPASy TrEMBL
Match: A0A6J1GWV5 (uncharacterized protein LOC111458174 OS=Cucurbita moschata OX=3662 GN=LOC111458174 PE=4 SV=1)

HSP 1 Score: 511.5 bits (1316), Expect = 2.3e-141
Identity = 260/292 (89.04%), Postives = 271/292 (92.81%), Query Frame = 0


Query: 3   ISAISPTPGLSTCSHDQFTLSNRLSLVSLRFSRPYRTISLPGGGNFIGRTNVLVHFETRT 62
           +S ISP   L  CSHD+FTL NRLSLVSLRFSRPY   SLPGGGN  GR N  VHFE R 
Sbjct: 1   MSGISPPAAL--CSHDKFTLPNRLSLVSLRFSRPYCATSLPGGGNRNGRANFFVHFEPRA 60

Query: 63  LLQEPQRLAFTFSTRAADSTQPSAVSASPDKPVVTDDEFSLAKVSFGVIGLGVGISLLSY 122
            LQ+PQRLAFTFS RAAD+TQPS+VSASPDK VVTDDEFSLAKVSFGVIGLGVGISLLSY
Sbjct: 61  PLQKPQRLAFTFSARAADTTQPSSVSASPDKAVVTDDEFSLAKVSFGVIGLGVGISLLSY 120

Query: 123 GFGAYFNILPGSEWSAIMLTYGFPLAIIGMALKYAELKPVPCLTYLDAQKLRETCATPIL 182
           GFGAYFNILPGSEWSAIMLTYGFPLAIIGMALKYAELKPVPCLTYL+AQKLRE+CATPIL
Sbjct: 121 GFGAYFNILPGSEWSAIMLTYGFPLAIIGMALKYAELKPVPCLTYLEAQKLRESCATPIL 180

Query: 183 KQVRDDVIRFRYGDEQHLDEALKRIFQYGLAGGIPRRSAPILQSIREEVTEDGKYCLVLV 242
           KQVRDDVIR+RYGDEQHLDEALKRIFQ+GLAGGIPRRSAPILQSIREEVTEDGKYCLVLV
Sbjct: 181 KQVRDDVIRYRYGDEQHLDEALKRIFQFGLAGGIPRRSAPILQSIREEVTEDGKYCLVLV 240

Query: 243 FEAKALTLSDFEQRQAKFASFFGPGITAEVGKGENDLYEVRLISNTIPGASP 295
           FEAKALTLSDFE+RQAKFASFFGPGI AEVGKG+NDLYEVRLISNTIPGASP
Sbjct: 241 FEAKALTLSDFEKRQAKFASFFGPGIAAEVGKGDNDLYEVRLISNTIPGASP 290

[Close]

BLAST of PI0020546 vs. ExPASy TrEMBL
Match: A0A6J1JQQ4 (uncharacterized protein LOC111486968 OS=Cucurbita maxima OX=3661 GN=LOC111486968 PE=4 SV=1)

HSP 1 Score: 508.1 bits (1307), Expect = 2.5e-140
Identity = 258/292 (88.36%), Postives = 270/292 (92.47%), Query Frame = 0


Query: 3   ISAISPTPGLSTCSHDQFTLSNRLSLVSLRFSRPYRTISLPGGGNFIGRTNVLVHFETRT 62
           +S ISP   L  CSHD+FTL NRLSLVSLRFSRPY   SLPGGGN  GR N  VH E R 
Sbjct: 1   MSGISPPAAL--CSHDKFTLPNRLSLVSLRFSRPYCATSLPGGGNRNGRANFFVHLEPRA 60

Query: 63  LLQEPQRLAFTFSTRAADSTQPSAVSASPDKPVVTDDEFSLAKVSFGVIGLGVGISLLSY 122
            LQ+PQRLAFTFS RAAD+TQPS+VSASPDK VVTDDEFSLAKVSFGVIGLGVGISLLSY
Sbjct: 61  PLQKPQRLAFTFSARAADTTQPSSVSASPDKAVVTDDEFSLAKVSFGVIGLGVGISLLSY 120

Query: 123 GFGAYFNILPGSEWSAIMLTYGFPLAIIGMALKYAELKPVPCLTYLDAQKLRETCATPIL 182
           GFGAYFNILPGSEWSAIMLTYGFPLAIIGMALKYAELKPVPCLTYL+AQKLRE+CATPIL
Sbjct: 121 GFGAYFNILPGSEWSAIMLTYGFPLAIIGMALKYAELKPVPCLTYLEAQKLRESCATPIL 180

Query: 183 KQVRDDVIRFRYGDEQHLDEALKRIFQYGLAGGIPRRSAPILQSIREEVTEDGKYCLVLV 242
           KQVRDDVIR+RYGDEQHLDEALKRIFQ+GLAGGIPRRSAPILQSIREEVTEDGKYCLVL+
Sbjct: 181 KQVRDDVIRYRYGDEQHLDEALKRIFQFGLAGGIPRRSAPILQSIREEVTEDGKYCLVLM 240

Query: 243 FEAKALTLSDFEQRQAKFASFFGPGITAEVGKGENDLYEVRLISNTIPGASP 295
           FEAKALTLSDFE+RQAKFASFFGPGI AEVGKG+NDLYEVRLISNTIPGASP
Sbjct: 241 FEAKALTLSDFEKRQAKFASFFGPGIAAEVGKGDNDLYEVRLISNTIPGASP 290

[Close]

BLAST of PI0020546 vs. NCBI nr
Match: XP_004141498.1 (uncharacterized protein LOC101213350 [Cucumis sativus] >KGN52572.1 hypothetical protein Csa_009392 [Cucumis sativus])

HSP 1 Score: 549.3 bits (1414), Expect = 2.0e-152
Identity = 278/294 (94.56%), Postives = 283/294 (96.26%), Query Frame = 0


Query: 1   MSISAISPTPGLSTCSHDQFTLSNRLSLVSLRFSRPYRTISLPGGGNFIGRTNVLVHFET 60
           MSI+AISPTPGLSTCSHDQFTLSNRLSLVSL FSRP RTISLPGG NFI RTNV VHFET
Sbjct: 1   MSITAISPTPGLSTCSHDQFTLSNRLSLVSLPFSRPNRTISLPGGANFIARTNVFVHFET 60

Query: 61  RTLLQEPQRLAFTFSTRAADSTQPSAVSASPDKPVVTDDEFSLAKVSFGVIGLGVGISLL 120
            TLL +P RLAF+FSTRAADSTQPSAVSASP K VVTDDEFSLAKVSFGVIGLGVG+SLL
Sbjct: 61  TTLLHKPHRLAFSFSTRAADSTQPSAVSASPGKAVVTDDEFSLAKVSFGVIGLGVGVSLL 120

Query: 121 SYGFGAYFNILPGSEWSAIMLTYGFPLAIIGMALKYAELKPVPCLTYLDAQKLRETCATP 180
           SYGFGAYFNILPGSEWSAIMLTYGFPLAIIGMALKYAELKPVPCLTYLDAQKLRETCATP
Sbjct: 121 SYGFGAYFNILPGSEWSAIMLTYGFPLAIIGMALKYAELKPVPCLTYLDAQKLRETCATP 180

Query: 181 ILKQVRDDVIRFRYGDEQHLDEALKRIFQYGLAGGIPRRSAPILQSIREEVTEDGKYCLV 240
           ILKQVRDDVIRFRYGDEQHLDEALKRIFQYGLAGGIPRRSAPILQSIREEVTEDGKYCLV
Sbjct: 181 ILKQVRDDVIRFRYGDEQHLDEALKRIFQYGLAGGIPRRSAPILQSIREEVTEDGKYCLV 240

Query: 241 LVFEAKALTLSDFEQRQAKFASFFGPGITAEVGKGENDLYEVRLISNTIPGASP 295
           LVFEAKALTLSDFE+RQAKFASFFGPGITAEVGKGENDLYEVRL SNTIPGASP
Sbjct: 241 LVFEAKALTLSDFEKRQAKFASFFGPGITAEVGKGENDLYEVRLTSNTIPGASP 294

[Close]

BLAST of PI0020546 vs. NCBI nr
Match: KAA0039379.1 (thylakoid membrane protein [Cucumis melo var. makuwa] >TYK00567.1 thylakoid membrane protein [Cucumis melo var. makuwa])

HSP 1 Score: 547.7 bits (1410), Expect = 5.9e-152
Identity = 277/294 (94.22%), Postives = 284/294 (96.60%), Query Frame = 0


Query: 1   MSISAISPTPGLSTCSHDQFTLSNRLSLVSLRFSRPYRTISLPGGGNFIGRTNVLVHFET 60
           MSI+AISPTPGLST SH QFTLSNRLSL+SL FSRP R ISLPGGGNFI RTNV VHFET
Sbjct: 1   MSITAISPTPGLSTSSHHQFTLSNRLSLLSLPFSRPNRPISLPGGGNFIARTNVFVHFET 60

Query: 61  RTLLQEPQRLAFTFSTRAADSTQPSAVSASPDKPVVTDDEFSLAKVSFGVIGLGVGISLL 120
           +TLL +P RLAFTFSTRAADSTQPSAVSASPDK VVTDDEFSLAKVSFGVIGLGVG+SLL
Sbjct: 61  KTLLHKPHRLAFTFSTRAADSTQPSAVSASPDKAVVTDDEFSLAKVSFGVIGLGVGVSLL 120

Query: 121 SYGFGAYFNILPGSEWSAIMLTYGFPLAIIGMALKYAELKPVPCLTYLDAQKLRETCATP 180
           SYGFGAYFNILPGSEWSAIMLTYGFPLAIIGMALKYAELKPVPCLTYLDAQKLRETCATP
Sbjct: 121 SYGFGAYFNILPGSEWSAIMLTYGFPLAIIGMALKYAELKPVPCLTYLDAQKLRETCATP 180

Query: 181 ILKQVRDDVIRFRYGDEQHLDEALKRIFQYGLAGGIPRRSAPILQSIREEVTEDGKYCLV 240
           ILKQVRDDVIRFRYGDEQHLDEALKRIFQYGLAGGIPRRSAPIL+SIREEVTEDGKYCLV
Sbjct: 181 ILKQVRDDVIRFRYGDEQHLDEALKRIFQYGLAGGIPRRSAPILESIREEVTEDGKYCLV 240

Query: 241 LVFEAKALTLSDFEQRQAKFASFFGPGITAEVGKGENDLYEVRLISNTIPGASP 295
           LVFEAKALTLSDFEQRQAKFASFFGPGITAEVGKGENDLYEVRLISN+IPGASP
Sbjct: 241 LVFEAKALTLSDFEQRQAKFASFFGPGITAEVGKGENDLYEVRLISNSIPGASP 294

[Close]

BLAST of PI0020546 vs. NCBI nr
Match: XP_008459460.1 (PREDICTED: thylakoid membrane protein slr0575 [Cucumis melo])

HSP 1 Score: 545.8 bits (1405), Expect = 2.3e-151
Identity = 276/294 (93.88%), Postives = 283/294 (96.26%), Query Frame = 0


Query: 1   MSISAISPTPGLSTCSHDQFTLSNRLSLVSLRFSRPYRTISLPGGGNFIGRTNVLVHFET 60
           MSI+AISPTPGLST SH QFTLSNRLSL+SL FSRP R I LPGGGNFI RTNV VHFET
Sbjct: 1   MSITAISPTPGLSTSSHHQFTLSNRLSLLSLPFSRPNRPIPLPGGGNFIARTNVFVHFET 60

Query: 61  RTLLQEPQRLAFTFSTRAADSTQPSAVSASPDKPVVTDDEFSLAKVSFGVIGLGVGISLL 120
           +TLL +P RLAFTFSTRAADSTQPSAVSASPDK VVTDDEFSLAKVSFGVIGLGVG+SLL
Sbjct: 61  KTLLHKPHRLAFTFSTRAADSTQPSAVSASPDKAVVTDDEFSLAKVSFGVIGLGVGVSLL 120

Query: 121 SYGFGAYFNILPGSEWSAIMLTYGFPLAIIGMALKYAELKPVPCLTYLDAQKLRETCATP 180
           SYGFGAYFNILPGSEWSAIMLTYGFPLAIIGMALKYAELKPVPCLTYLDAQKLRETCATP
Sbjct: 121 SYGFGAYFNILPGSEWSAIMLTYGFPLAIIGMALKYAELKPVPCLTYLDAQKLRETCATP 180

Query: 181 ILKQVRDDVIRFRYGDEQHLDEALKRIFQYGLAGGIPRRSAPILQSIREEVTEDGKYCLV 240
           ILKQVRDDVIRFRYGDEQHLDEALKRIFQYGLAGGIPRRSAPIL+SIREEVTEDGKYCLV
Sbjct: 181 ILKQVRDDVIRFRYGDEQHLDEALKRIFQYGLAGGIPRRSAPILESIREEVTEDGKYCLV 240

Query: 241 LVFEAKALTLSDFEQRQAKFASFFGPGITAEVGKGENDLYEVRLISNTIPGASP 295
           LVFEAKALTLSDFEQRQAKFASFFGPGITAEVGKGENDLYEVRLISN+IPGASP
Sbjct: 241 LVFEAKALTLSDFEQRQAKFASFFGPGITAEVGKGENDLYEVRLISNSIPGASP 294

[Close]

BLAST of PI0020546 vs. NCBI nr
Match: XP_038890554.1 (thylakoid membrane protein slr0575-like [Benincasa hispida])

HSP 1 Score: 524.2 bits (1349), Expect = 7.0e-145
Identity = 264/290 (91.03%), Postives = 271/290 (93.45%), Query Frame = 0


Query: 1   MSISAISPTPGLSTCSHDQFTLSNRLSLVSLRFSRPYRTISLPGGGNFIGRTNVLVHFET 60
           MSIS ISPTPGL +CSHDQFTL NRLS++SLRFSRPYRTIS PGGGNFIGR N LVHFE 
Sbjct: 1   MSISGISPTPGLCSCSHDQFTLGNRLSVLSLRFSRPYRTISPPGGGNFIGRPNFLVHFEP 60

Query: 61  RTLLQEPQRLAFTFSTRAADSTQPSAVSASPDKPVVTDDEFSLAKVSFGVIGLGVGISLL 120
           RTLLQ+PQRLAFTFS RAADSTQPS+VSASPDK VV+DDEFSLAKVSFGVIGLGVGISLL
Sbjct: 61  RTLLQKPQRLAFTFSARAADSTQPSSVSASPDKAVVSDDEFSLAKVSFGVIGLGVGISLL 120

Query: 121 SYGFGAYFNILPGSEWSAIMLTYGFPLAIIGMALKYAELKPVPCLTYLDAQKLRETCATP 180
           SYGFGAYFNILPGSEWSAIMLTYGFPLAIIGMALKYAELKPVPCLTY DAQKLRETCATP
Sbjct: 121 SYGFGAYFNILPGSEWSAIMLTYGFPLAIIGMALKYAELKPVPCLTYSDAQKLRETCATP 180

Query: 181 ILKQVRDDVIRFRYGDEQHLDEALKRIFQYGLAGGIPRRSAPILQSIREEVTEDGKYCLV 240
           ILKQVRDDVIRFRYGDEQHLDEALKRIFQYG+AGGIPRRSAPILQSIREEV EDGKYCLV
Sbjct: 181 ILKQVRDDVIRFRYGDEQHLDEALKRIFQYGMAGGIPRRSAPILQSIREEVIEDGKYCLV 240

Query: 241 LVFEAKALTLSDFEQRQAKFASFFGPGITAEVGKGENDLYEVRLISNTIP 291
           LVFEAKALTLSDFEQRQAKFASFFGPGITAEVGKGE DLYE  L     P
Sbjct: 241 LVFEAKALTLSDFEQRQAKFASFFGPGITAEVGKGETDLYETGLFLTLFP 290

[Close]

BLAST of PI0020546 vs. NCBI nr
Match: XP_023524489.1 (uncharacterized protein LOC111788387 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 511.9 bits (1317), Expect = 3.6e-141
Identity = 258/292 (88.36%), Postives = 272/292 (93.15%), Query Frame = 0


Query: 3   ISAISPTPGLSTCSHDQFTLSNRLSLVSLRFSRPYRTISLPGGGNFIGRTNVLVHFETRT 62
           +S ISP   L  CSHD+FTL NRLSLVSLRFSRPY   SLPGGGN+ GR N  VHFE R 
Sbjct: 1   MSGISPPAAL--CSHDKFTLPNRLSLVSLRFSRPYCATSLPGGGNWNGRANFFVHFEPRA 60

Query: 63  LLQEPQRLAFTFSTRAADSTQPSAVSASPDKPVVTDDEFSLAKVSFGVIGLGVGISLLSY 122
            LQ+PQRLAFTFS RAAD+TQPS+VSASPDK VVTDDEFSLAKVSFGVIGLGVGISLLSY
Sbjct: 61  PLQKPQRLAFTFSARAADTTQPSSVSASPDKAVVTDDEFSLAKVSFGVIGLGVGISLLSY 120

Query: 123 GFGAYFNILPGSEWSAIMLTYGFPLAIIGMALKYAELKPVPCLTYLDAQKLRETCATPIL 182
           GFGAYFN+LPGSEWSAIMLTYGFPLAIIGMALKYAELKPVPCLTYL+AQKLRE+CATPIL
Sbjct: 121 GFGAYFNVLPGSEWSAIMLTYGFPLAIIGMALKYAELKPVPCLTYLEAQKLRESCATPIL 180

Query: 183 KQVRDDVIRFRYGDEQHLDEALKRIFQYGLAGGIPRRSAPILQSIREEVTEDGKYCLVLV 242
           KQVRDDV+R+RYGDEQHLDEALKRIFQ+GLAGGIPRRSAPILQSIREEVTEDGKYCLVLV
Sbjct: 181 KQVRDDVLRYRYGDEQHLDEALKRIFQFGLAGGIPRRSAPILQSIREEVTEDGKYCLVLV 240

Query: 243 FEAKALTLSDFEQRQAKFASFFGPGITAEVGKGENDLYEVRLISNTIPGASP 295
           FEAKALTLSDFE+RQAKFASFFGPGI AEVGKG+NDLYEVRLISNTIPGASP
Sbjct: 241 FEAKALTLSDFEKRQAKFASFFGPGIAAEVGKGDNDLYEVRLISNTIPGASP 290

[Close]

BLAST of PI0020546 vs. TAIR 10
Match: AT5G38660.1 (acclimation of photosynthesis to environment )

HSP 1 Score: 345.9 bits (886), Expect = 3.2e-95
Identity = 173/212 (81.60%), Postives = 192/212 (90.57%), Query Frame = 0


Query: 77  RAADSTQPSAVSASPDKPVVTDDEFSLAKVSFGVIGLGVGISLLSYGFGAYFNILPGSEW 136
           RAADST  S   AS D+ ++ DDEF+LAK+SFGVIGLG+G+SLLSYGFGAYF ILPG+EW
Sbjct: 65  RAADSTSSSPSVASGDRTLIPDDEFTLAKISFGVIGLGLGVSLLSYGFGAYFTILPGTEW 124

Query: 137 SAIMLTYGFPLAIIGMALKYAELKPVPCLTYLDAQKLRETCATPILKQVRDDVIRFRYGD 196
           SAIMLTYGFPL+IIGMALKYAELKPVPCL+Y DA KLRE+CATPIL QVR+DV R+RYGD
Sbjct: 125 SAIMLTYGFPLSIIGMALKYAELKPVPCLSYSDAVKLRESCATPILTQVRNDVTRYRYGD 184

Query: 197 EQHLDEALKRIFQYGLAGGIPRRSAPILQSIREEVTEDGKYCLVLVFEAKALTLSDFEQR 256
           EQHL+EALKRIFQYGL GGIPRRSAPILQ IREEV  DG+YC+VLVFEAKALTLSDFE+R
Sbjct: 185 EQHLEEALKRIFQYGLGGGIPRRSAPILQLIREEVLTDGRYCVVLVFEAKALTLSDFEKR 244

Query: 257 QAKFASFFGPGITAEVGKGEND-LYEVRLISN 288
           QAKF SFFGP ITAEVGKGE++ LYEVRLISN
Sbjct: 245 QAKFTSFFGPNITAEVGKGESENLYEVRLISN 276

[Close]

BLAST of PI0020546 vs. TAIR 10
Match: AT5G38660.2 (acclimation of photosynthesis to environment )

HSP 1 Score: 323.6 bits (828), Expect = 1.7e-88
Identity = 160/196 (81.63%), Postives = 177/196 (90.31%), Query Frame = 0


Query: 77  RAADSTQPSAVSASPDKPVVTDDEFSLAKVSFGVIGLGVGISLLSYGFGAYFNILPGSEW 136
           RAADST  S   AS D+ ++ DDEF+LAK+SFGVIGLG+G+SLLSYGFGAYF ILPG+EW
Sbjct: 65  RAADSTSSSPSVASGDRTLIPDDEFTLAKISFGVIGLGLGVSLLSYGFGAYFTILPGTEW 124

Query: 137 SAIMLTYGFPLAIIGMALKYAELKPVPCLTYLDAQKLRETCATPILKQVRDDVIRFRYGD 196
           SAIMLTYGFPL+IIGMALKYAELKPVPCL+Y DA KLRE+CATPIL QVR+DV R+RYGD
Sbjct: 125 SAIMLTYGFPLSIIGMALKYAELKPVPCLSYSDAVKLRESCATPILTQVRNDVTRYRYGD 184

Query: 197 EQHLDEALKRIFQYGLAGGIPRRSAPILQSIREEVTEDGKYCLVLVFEAKALTLSDFEQR 256
           EQHL+EALKRIFQYGL GGIPRRSAPILQ IREEV  DG+YC+VLVFEAKALTLSDFE+R
Sbjct: 185 EQHLEEALKRIFQYGLGGGIPRRSAPILQLIREEVLTDGRYCVVLVFEAKALTLSDFEKR 244

Query: 257 QAKFASFFGPGITAEV 273
           QAKF SFFGP ITAEV
Sbjct: 245 QAKFTSFFGPNITAEV 260

The following BLAST results are available for this feature:

BLAST of PI0020546 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q55403	3.8e-24	40.64	Thylakoid membrane protein slr0575 OS=Synechocystis sp. (strain PCC 6803 / Kazus...	[more]

BLAST of PI0020546 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KVX1	9.9e-153	94.56	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G644000 PE=4 SV=1	[more]
A0A5A7TDN5	2.9e-152	94.22	Thylakoid membrane protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaff...	[more]
A0A1S3CAR1	1.1e-151	93.88	thylakoid membrane protein slr0575 OS=Cucumis melo OX=3656 GN=LOC103498589 PE=4 ...	[more]
A0A6J1GWV5	2.3e-141	89.04	uncharacterized protein LOC111458174 OS=Cucurbita moschata OX=3662 GN=LOC1114581...	[more]
A0A6J1JQQ4	2.5e-140	88.36	uncharacterized protein LOC111486968 OS=Cucurbita maxima OX=3661 GN=LOC111486968...	[more]

BLAST of PI0020546 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004141498.1	2.0e-152	94.56	uncharacterized protein LOC101213350 [Cucumis sativus] >KGN52572.1 hypothetical ...	[more]
KAA0039379.1	5.9e-152	94.22	thylakoid membrane protein [Cucumis melo var. makuwa] >TYK00567.1 thylakoid memb...	[more]
XP_008459460.1	2.3e-151	93.88	PREDICTED: thylakoid membrane protein slr0575 [Cucumis melo]	[more]
XP_038890554.1	7.0e-145	91.03	thylakoid membrane protein slr0575-like [Benincasa hispida]	[more]
XP_023524489.1	3.6e-141	88.36	uncharacterized protein LOC111788387 [Cucurbita pepo subsp. pepo]	[more]

BLAST of PI0020546 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G38660.1	3.2e-95	81.60	acclimation of photosynthesis to environment	[more]
AT5G38660.2	1.7e-88	81.63	acclimation of photosynthesis to environment	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR021275	Protein of unknown function DUF2854	PFAM	PF11016	DUF2854	coord: 122..272 e-value: 1.7E-48 score: 164.3
IPR021275	Protein of unknown function DUF2854	PANTHER	PTHR35551	FAMILY NOT NAMED	coord: 56..290

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0020546.2	PI0020546.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane