Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGTCCTCTAGAGGACGAAATGGTAAAGCCCGCCAAAACAAGAAAGATTGTAATCAAGAAGAAAGTCCTCATGGATCAAATGGCGAAAAGAAAAGAGGTTAAGGCGAAGAAAAATGACCATGAGGACGAGGTGGTGCAAGAAGAGGAAGATGACATTGGCCAAGAAGACGGCGAAAAGCCCATCACCGCAAAGAACGTCTCAAGACACTTAAAGATAGAGAAGAGGCTCTATCCTGCAAGAGGCGTTCTGTCCAGCTTCATCTCTGCGCCCATTCATGCATTCAAATGGCAAAAATTCTTCAAAAGGGTAACGGAGTTGAGGTCGGACGTAGTCAAGCTATTTTACAAGGGCTTCATTGACAAAGACGGAAACTACGTGGTGGTGAGGCAAAGACGAGTAAATTTTGGGGCAAAGGCAGTCAACGCGTTCTTCGGGTTAGAAGACAATGAAGTGGGGCAAGTAATTTTCAAGAACTCCACTCCGCAAGATAAAGAGGACGCGTTAAAGAAGATAGCATGGCCAGGCACAAATTGGGACATAACGCCAACTGGAAAGTACCAGCTCTTAGCGCATAATTTAAACACTAAAGCAAACGTCTAG
mRNA sequence
ATGAGTCCTCTAGAGGACGAAATGGTAAAGCCCGCCAAAACAAGAAAGATTGTAATCAAGAAGAAAGTCCTCATGGATCAAATGGCGAAAAGAAAAGAGGTTAAGGCGAAGAAAAATGACCATGAGGACGAGGTGGTGCAAGAAGAGGAAGATGACATTGGCCAAGAAGACGGCGAAAAGCCCATCACCGCAAAGAACGTCTCAAGACACTTAAAGATAGAGAAGAGGCTCTATCCTGCAAGAGGCGTTCTGTCCAGCTTCATCTCTGCGCCCATTCATGCATTCAAATGGCAAAAATTCTTCAAAAGGGTAACGGAGTTGAGGTCGGACGTAGTCAAGCTATTTTACAAGGGCTTCATTGACAAAGACGGAAACTACGTGGTGGTGAGGCAAAGACGAGTAAATTTTGGGGCAAAGGCAGTCAACGCGTTCTTCGGGTTAGAAGACAATGAAGTGGGGCAAGTAATTTTCAAGAACTCCACTCCGCAAGATAAAGAGGACGCGTTAAAGAAGATAGCATGGCCAGGCACAAATTGGGACATAACGCCAACTGGAAAGTACCAGCTCTTAGCGCATAATTTAAACACTAAAGCAAACGTCTAG
Coding sequence (CDS)
ATGAGTCCTCTAGAGGACGAAATGGTAAAGCCCGCCAAAACAAGAAAGATTGTAATCAAGAAGAAAGTCCTCATGGATCAAATGGCGAAAAGAAAAGAGGTTAAGGCGAAGAAAAATGACCATGAGGACGAGGTGGTGCAAGAAGAGGAAGATGACATTGGCCAAGAAGACGGCGAAAAGCCCATCACCGCAAAGAACGTCTCAAGACACTTAAAGATAGAGAAGAGGCTCTATCCTGCAAGAGGCGTTCTGTCCAGCTTCATCTCTGCGCCCATTCATGCATTCAAATGGCAAAAATTCTTCAAAAGGGTAACGGAGTTGAGGTCGGACGTAGTCAAGCTATTTTACAAGGGCTTCATTGACAAAGACGGAAACTACGTGGTGGTGAGGCAAAGACGAGTAAATTTTGGGGCAAAGGCAGTCAACGCGTTCTTCGGGTTAGAAGACAATGAAGTGGGGCAAGTAATTTTCAAGAACTCCACTCCGCAAGATAAAGAGGACGCGTTAAAGAAGATAGCATGGCCAGGCACAAATTGGGACATAACGCCAACTGGAAAGTACCAGCTCTTAGCGCATAATTTAAACACTAAAGCAAACGTCTAG
Protein sequence
MSPLEDEMVKPAKTRKIVIKKKVLMDQMAKRKEVKAKKNDHEDEVVQEEEDDIGQEDGEKPITAKNVSRHLKIEKRLYPARGVLSSFISAPIHAFKWQKFFKRVTELRSDVVKLFYKGFIDKDGNYVVVRQRRVNFGAKAVNAFFGLEDNEVGQVIFKNSTPQDKEDALKKIAWPGTNWDITPTGKYQLLAHNLNTKANV
Homology
BLAST of PI0020500 vs. ExPASy TrEMBL
Match:
A0A5D3DQE5 (Protein MNN4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold436G001110 PE=4 SV=1)
HSP 1 Score: 208.4 bits (529), Expect = 2.8e-50
Identity = 104/201 (51.74%), Postives = 144/201 (71.64%), Query Frame = 0
Query: 1 MSPLED-EMVKPAKTRKIVIKKKVLMDQMAKRKEVKAKKNDHEDEVVQEEEDDIGQEDGE 60
+SP ED E+VKP+K RK+ +K KVL Q A R+E K KK H +++ +EEED + + E
Sbjct: 69 LSPSEDEEVVKPSKKRKVTMKMKVLSKQFADRQEEKEKKGPHIEDIKEEEEDQ--ESEME 128
Query: 61 KPITAKNVSRHLKIEKRLYPARGVLSSFISAPIHAFKWQKFFKRVTELRSDVVKLFYKGF 120
KP++A VS+ IEKRLYP +G++ +F+++PI AF KFFK VT +R+DV LFYKG+
Sbjct: 129 KPLSANEVSKQFMIEKRLYPFKGIMLAFLASPIRAFSQGKFFKGVTTIRADVKNLFYKGY 188
Query: 121 IDKDGNYVVVRQRRVNFGAKAVNAFFGLEDNEVGQVIFKNSTPQDKEDALKKIAWPGTNW 180
I K +YV+++ ++V F + +NA + L+DN +G IFKN T QD +DAL +++WPGT W
Sbjct: 189 ISKKKHYVMIKGKKVYFRPEVINALYRLDDNVIGHAIFKNPTQQDMQDALARVSWPGTKW 248
Query: 181 DITPTGKYQLLAHNLNTKANV 201
D TPTGKYQL HNLNT ANV
Sbjct: 249 DRTPTGKYQLFPHNLNTAANV 267
BLAST of PI0020500 vs. ExPASy TrEMBL
Match:
A0A5A7TZE0 (Protein MNN4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold600G001090 PE=4 SV=1)
HSP 1 Score: 148.7 bits (374), Expect = 2.6e-32
Identity = 81/200 (40.50%), Postives = 120/200 (60.00%), Query Frame = 0
Query: 1 MSPLEDEMVKPAKTRKIVIKKKVLMDQMAKRKEVKAKKNDHEDEVVQEEEDDIGQEDGEK 60
+SPLED +V+ K KK+VL Q A ++E K K E E + E++ +
Sbjct: 71 LSPLEDRVVE-----KQPKKKRVLEGQDAMKREKKNKTVQREQESQKSEQEGV------- 130
Query: 61 PITAKNVSRHLKIEKRLYPARGVLSSFISAPIHAFKWQKFFKRVTELRSDVVKLFYKGFI 120
+ A+ + +H IEK ++P +G L F+++PI A KW++FF+ VT +R V+ LFY G I
Sbjct: 131 -LFAEELGKHFMIEKGIFPFKGQLPLFLTSPIKALKWKQFFEGVTTIRPSVMNLFYNGSI 190
Query: 121 DKDGNYVVVRQRRVNFGAKAVNAFFGLEDNEVGQVIFKNSTPQDKEDALKKIAWPGTNWD 180
+ + +Y +V+ + VNFG K VN +GL V IFK + D ++AL+++AWPG WD
Sbjct: 191 NTERHYAIVKGKMVNFGPKVVNVLYGLRQTTVEYPIFKEPSDIDMQNALERVAWPGMKWD 250
Query: 181 ITPTGKYQLLAHNLNTKANV 201
ITP KYQL HNL T A+V
Sbjct: 251 ITPIKKYQLFPHNLKTTASV 257
BLAST of PI0020500 vs. ExPASy TrEMBL
Match:
A0A0A0K4F2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G327740 PE=4 SV=1)
HSP 1 Score: 138.7 bits (348), Expect = 2.7e-29
Identity = 79/182 (43.41%), Postives = 108/182 (59.34%), Query Frame = 0
Query: 19 IKKKVLMDQMAKRKEVKAKKNDHEDEVVQEEEDDIGQEDGEKPITAKNVSRHLKIEKRLY 78
+KK++L Q+AKR+E K KK D EV+ EE++ ++ + + L+ K
Sbjct: 6 VKKEMLRQQVAKRREEKVKKVDSHCEVILREEEEDHDDEEKNTHYFCQYPQILQSGKMDL 65
Query: 79 PARGVLSSFISAPIHAFKWQKFFKRVTELRSDVVKLFYKGFIDKDGNYVVVRQRRVNFGA 138
P + S P + ++ V ++R DVV LFYK FI + NY VV+Q V FG
Sbjct: 66 PFQRRSSELFEFPYPYVEVRETLCGVFDMRVDVVNLFYKSFIHDEENYTVVKQEHVYFGL 125
Query: 139 KAVNAFFGLEDNEVGQVIFKNSTPQDKEDALKKIAWPGTNWDITPTGKYQLLAHNLNTKA 198
+NAF+GL+ NEVGQVIFKNSTP+D +D LK I W T WD PT KYQL +HNLNT A
Sbjct: 126 DDINAFYGLDTNEVGQVIFKNSTPKDMDDGLKTITWLKTEWDNKPTEKYQLFSHNLNTCA 185
Query: 199 NV 201
++
Sbjct: 186 SI 187
BLAST of PI0020500 vs. ExPASy TrEMBL
Match:
A0A5A7TU45 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold316G001360 PE=4 SV=1)
HSP 1 Score: 123.6 bits (309), Expect = 9.1e-25
Identity = 50/96 (52.08%), Postives = 72/96 (75.00%), Query Frame = 0
Query: 104 VTELRSDVVKLFYKGFIDKDGNYVVVRQRRVNFGAKAVNAFFGLEDNEVGQVIFKNSTPQ 163
+T +R+DVV LFYKG++ ++ Y +V +++V+FG A+N F+GL+DNE+G IFKN Q
Sbjct: 1 MTMIRADVVNLFYKGYMSEEKQYAMVNEKKVDFGPDAINMFYGLDDNEIGHAIFKNPKEQ 60
Query: 164 DKEDALKKIAWPGTNWDITPTGKYQLLAHNLNTKAN 200
+ ++ L ++AWPGT WD TPT KYQL HNLNT+ N
Sbjct: 61 NLQEGLTRVAWPGTKWDRTPTRKYQLFPHNLNTEVN 96
BLAST of PI0020500 vs. ExPASy TrEMBL
Match:
A0A5D3DJM3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold419G00400 PE=4 SV=1)
HSP 1 Score: 121.7 bits (304), Expect = 3.5e-24
Identity = 52/94 (55.32%), Postives = 70/94 (74.47%), Query Frame = 0
Query: 107 LRSDVVKLFYKGFIDKDGNYVVVRQRRVNFGAKAVNAFFGLEDNEVGQVIFKNSTPQDKE 166
+R DV+K+FYKG+I+++ NY +V+ ++++FG A+N FGLE NE+G IFKN QD E
Sbjct: 4 IRPDVMKIFYKGYINEEENYFMVKWQKLDFGPNAINGLFGLEANELGHTIFKNLQEQDLE 63
Query: 167 DALKKIAWPGTNWDITPTGKYQLLAHNLNTKANV 201
DA +AW G WDITPTGKYQL H LNT+AN+
Sbjct: 64 DASITVAWSGIKWDITPTGKYQLFPHKLNTEANI 97
BLAST of PI0020500 vs. NCBI nr
Match:
TYK25886.1 (protein MNN4-like [Cucumis melo var. makuwa])
HSP 1 Score: 208.4 bits (529), Expect = 5.8e-50
Identity = 104/201 (51.74%), Postives = 144/201 (71.64%), Query Frame = 0
Query: 1 MSPLED-EMVKPAKTRKIVIKKKVLMDQMAKRKEVKAKKNDHEDEVVQEEEDDIGQEDGE 60
+SP ED E+VKP+K RK+ +K KVL Q A R+E K KK H +++ +EEED + + E
Sbjct: 69 LSPSEDEEVVKPSKKRKVTMKMKVLSKQFADRQEEKEKKGPHIEDIKEEEEDQ--ESEME 128
Query: 61 KPITAKNVSRHLKIEKRLYPARGVLSSFISAPIHAFKWQKFFKRVTELRSDVVKLFYKGF 120
KP++A VS+ IEKRLYP +G++ +F+++PI AF KFFK VT +R+DV LFYKG+
Sbjct: 129 KPLSANEVSKQFMIEKRLYPFKGIMLAFLASPIRAFSQGKFFKGVTTIRADVKNLFYKGY 188
Query: 121 IDKDGNYVVVRQRRVNFGAKAVNAFFGLEDNEVGQVIFKNSTPQDKEDALKKIAWPGTNW 180
I K +YV+++ ++V F + +NA + L+DN +G IFKN T QD +DAL +++WPGT W
Sbjct: 189 ISKKKHYVMIKGKKVYFRPEVINALYRLDDNVIGHAIFKNPTQQDMQDALARVSWPGTKW 248
Query: 181 DITPTGKYQLLAHNLNTKANV 201
D TPTGKYQL HNLNT ANV
Sbjct: 249 DRTPTGKYQLFPHNLNTAANV 267
BLAST of PI0020500 vs. NCBI nr
Match:
KAA0048500.1 (protein MNN4-like [Cucumis melo var. makuwa] >TYK28291.1 protein MNN4-like [Cucumis melo var. makuwa])
HSP 1 Score: 148.7 bits (374), Expect = 5.5e-32
Identity = 81/200 (40.50%), Postives = 120/200 (60.00%), Query Frame = 0
Query: 1 MSPLEDEMVKPAKTRKIVIKKKVLMDQMAKRKEVKAKKNDHEDEVVQEEEDDIGQEDGEK 60
+SPLED +V+ K KK+VL Q A ++E K K E E + E++ +
Sbjct: 71 LSPLEDRVVE-----KQPKKKRVLEGQDAMKREKKNKTVQREQESQKSEQEGV------- 130
Query: 61 PITAKNVSRHLKIEKRLYPARGVLSSFISAPIHAFKWQKFFKRVTELRSDVVKLFYKGFI 120
+ A+ + +H IEK ++P +G L F+++PI A KW++FF+ VT +R V+ LFY G I
Sbjct: 131 -LFAEELGKHFMIEKGIFPFKGQLPLFLTSPIKALKWKQFFEGVTTIRPSVMNLFYNGSI 190
Query: 121 DKDGNYVVVRQRRVNFGAKAVNAFFGLEDNEVGQVIFKNSTPQDKEDALKKIAWPGTNWD 180
+ + +Y +V+ + VNFG K VN +GL V IFK + D ++AL+++AWPG WD
Sbjct: 191 NTERHYAIVKGKMVNFGPKVVNVLYGLRQTTVEYPIFKEPSDIDMQNALERVAWPGMKWD 250
Query: 181 ITPTGKYQLLAHNLNTKANV 201
ITP KYQL HNL T A+V
Sbjct: 251 ITPIKKYQLFPHNLKTTASV 257
BLAST of PI0020500 vs. NCBI nr
Match:
KGN44535.1 (hypothetical protein Csa_015502 [Cucumis sativus])
HSP 1 Score: 138.7 bits (348), Expect = 5.7e-29
Identity = 79/182 (43.41%), Postives = 108/182 (59.34%), Query Frame = 0
Query: 19 IKKKVLMDQMAKRKEVKAKKNDHEDEVVQEEEDDIGQEDGEKPITAKNVSRHLKIEKRLY 78
+KK++L Q+AKR+E K KK D EV+ EE++ ++ + + L+ K
Sbjct: 6 VKKEMLRQQVAKRREEKVKKVDSHCEVILREEEEDHDDEEKNTHYFCQYPQILQSGKMDL 65
Query: 79 PARGVLSSFISAPIHAFKWQKFFKRVTELRSDVVKLFYKGFIDKDGNYVVVRQRRVNFGA 138
P + S P + ++ V ++R DVV LFYK FI + NY VV+Q V FG
Sbjct: 66 PFQRRSSELFEFPYPYVEVRETLCGVFDMRVDVVNLFYKSFIHDEENYTVVKQEHVYFGL 125
Query: 139 KAVNAFFGLEDNEVGQVIFKNSTPQDKEDALKKIAWPGTNWDITPTGKYQLLAHNLNTKA 198
+NAF+GL+ NEVGQVIFKNSTP+D +D LK I W T WD PT KYQL +HNLNT A
Sbjct: 126 DDINAFYGLDTNEVGQVIFKNSTPKDMDDGLKTITWLKTEWDNKPTEKYQLFSHNLNTCA 185
Query: 199 NV 201
++
Sbjct: 186 SI 187
BLAST of PI0020500 vs. NCBI nr
Match:
KAA0045357.1 (hypothetical protein E6C27_scaffold316G001360 [Cucumis melo var. makuwa])
HSP 1 Score: 123.6 bits (309), Expect = 1.9e-24
Identity = 50/96 (52.08%), Postives = 72/96 (75.00%), Query Frame = 0
Query: 104 VTELRSDVVKLFYKGFIDKDGNYVVVRQRRVNFGAKAVNAFFGLEDNEVGQVIFKNSTPQ 163
+T +R+DVV LFYKG++ ++ Y +V +++V+FG A+N F+GL+DNE+G IFKN Q
Sbjct: 1 MTMIRADVVNLFYKGYMSEEKQYAMVNEKKVDFGPDAINMFYGLDDNEIGHAIFKNPKEQ 60
Query: 164 DKEDALKKIAWPGTNWDITPTGKYQLLAHNLNTKAN 200
+ ++ L ++AWPGT WD TPT KYQL HNLNT+ N
Sbjct: 61 NLQEGLTRVAWPGTKWDRTPTRKYQLFPHNLNTEVN 96
BLAST of PI0020500 vs. NCBI nr
Match:
TYK23866.1 (hypothetical protein E5676_scaffold419G00400 [Cucumis melo var. makuwa])
HSP 1 Score: 121.7 bits (304), Expect = 7.2e-24
Identity = 52/94 (55.32%), Postives = 70/94 (74.47%), Query Frame = 0
Query: 107 LRSDVVKLFYKGFIDKDGNYVVVRQRRVNFGAKAVNAFFGLEDNEVGQVIFKNSTPQDKE 166
+R DV+K+FYKG+I+++ NY +V+ ++++FG A+N FGLE NE+G IFKN QD E
Sbjct: 4 IRPDVMKIFYKGYINEEENYFMVKWQKLDFGPNAINGLFGLEANELGHTIFKNLQEQDLE 63
Query: 167 DALKKIAWPGTNWDITPTGKYQLLAHNLNTKANV 201
DA +AW G WDITPTGKYQL H LNT+AN+
Sbjct: 64 DASITVAWSGIKWDITPTGKYQLFPHKLNTEANI 97
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A5D3DQE5 | 2.8e-50 | 51.74 | Protein MNN4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold436G00... | [more] |
| A0A5A7TZE0 | 2.6e-32 | 40.50 | Protein MNN4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold600G00... | [more] |
| A0A0A0K4F2 | 2.7e-29 | 43.41 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G327740 PE=4 SV=1 | [more] |
| A0A5A7TU45 | 9.1e-25 | 52.08 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... | [more] |
| A0A5D3DJM3 | 3.5e-24 | 55.32 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| TYK25886.1 | 5.8e-50 | 51.74 | protein MNN4-like [Cucumis melo var. makuwa] | [more] |
| KAA0048500.1 | 5.5e-32 | 40.50 | protein MNN4-like [Cucumis melo var. makuwa] >TYK28291.1 protein MNN4-like [Cucu... | [more] |
| KGN44535.1 | 5.7e-29 | 43.41 | hypothetical protein Csa_015502 [Cucumis sativus] | [more] |
| KAA0045357.1 | 1.9e-24 | 52.08 | hypothetical protein E6C27_scaffold316G001360 [Cucumis melo var. makuwa] | [more] |
| TYK23866.1 | 7.2e-24 | 55.32 | hypothetical protein E5676_scaffold419G00400 [Cucumis melo var. makuwa] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
