PI0020449 (gene) Melon (PI 482460) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGGGTCTGTGCCTCATCCCAGAACTCAAATGCTAGCCTCACCAACTGGCCTTTCACTGCGAAAATTATTCATATAGATGGTAGGCTACAAGAATTGAGGCACCCAGTAAAGGCCAGCCACATTCTCAATCAAAATCCCAACTGTTTCCTCTGTAGTTCAGAATCTATGAAAATCGATTCAATCGTTCCTCAAATATCCAGCGACAGAGAGCTCGAATTGGGGGAAATTTATTTTCTAATCCCGCTCAAGAAAGCCCATCTGCCGATCTCTTTAACAGATTTATGTAGTTTGGCCGCCAAAGCAAATGTGGCCCTCGCTAGCTCCAAGAAAGCGTATCCGTCTTTGAAAGCGGCGCCGACCGCCGTTGGTTACCAAATCGGAGCGGCTGGGACGTCGTATTGAGATTCCGGCGAAGTGGGTATAAGGCCATTTGGGAGAAGAAGCGGAGGGTGAGGGCGGAGAGTGATGGCATTGCATCAGAAGAATGCGTCCATGGCGAAAGCTGTGTAGTTGAGAGATGAATTTGTTTATGTAAAGTTTGTAAAGAGAAACAGAGCACAAAGCTTGA ATGGGGGTCTGTGCCTCATCCCAGAACTCAAATGCTAGCCTCACCAACTGGCCTTTCACTGCGAAAATTATTCATATAGATGGTAGGCTACAAGAATTGAGGCACCCAGTAAAGGCCAGCCACATTCTCAATCAAAATCCCAACTGTTTCCTCTGTAGTTCAGAATCTATGAAAATCGATTCAATCGTTCCTCAAATATCCAGCGACAGAGAGCTCGAATTGGGGGAAATTTATTTTCTAATCCCGCTCAAGAAAGCCCATCTGCCGATCTCTTTAACAGATTTATGTAGTTTGGCCGCCAAAGCAAATGTGGCCCTCGCTAGCTCCAAGAAAGCGTATCCGTCTTTGAAAGCGGCGCCGACCGCCGTTGGTTACCAAATCGGAGCGGCTGGGACGTCGTATTGAGATTCCGGCGAAGTGGGTATAAGGCCATTTGGGAGAAGAAGCGGAGGGTGAGGGCGGAGAGTGATGGCATTGCATCAGAAGAATGCGTCCATGGCGAAAGCTGTGTAGTTGAGAGATGAATTTGTTTATGTAAAGTTTGTAAAGAGAAACAGAGCACAAAGCTTGA ATGGGGGTCTGTGCCTCATCCCAGAACTCAAATGCTAGCCTCACCAACTGGCCTTTCACTGCGAAAATTATTCATATAGATGGTAGGCTACAAGAATTGAGGCACCCAGTAAAGGCCAGCCACATTCTCAATCAAAATCCCAACTGTTTCCTCTGTAGTTCAGAATCTATGAAAATCGATTCAATCGTTCCTCAAATATCCAGCGACAGAGAGCTCGAATTGGGGGAAATTTATTTTCTAATCCCGCTCAAGAAAGCCCATCTGCCGATCTCTTTAACAGATTTATGTAGTTTGGCCGCCAAAGCAAATGTGGCCCTCGCTAGCTCCAAGAAAGCGTATCCGTCTTTGAAAGCGGCGCCGACCGCCGTTGGTTACCAAATCGGAGCGGCTGGGACGTCGTATTGA MGVCASSQNSNASLTNWPFTAKIIHIDGRLQELRHPVKASHILNQNPNCFLCSSESMKIDSIVPQISSDRELELGEIYFLIPLKKAHLPISLTDLCSLAAKANVALASSKKAYPSLKAAPTAVGYQIGAAGTSY Homology
BLAST of PI0020449 vs. ExPASy TrEMBL
Match: A0A5D3CPA0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold299G001510 PE=4 SV=1) HSP 1 Score: 256.9 bits (655), Expect = 4.6e-65 Identity = 130/134 (97.01%), Postives = 133/134 (99.25%), Query Frame = 0
BLAST of PI0020449 vs. ExPASy TrEMBL
Match: A0A6J1D5R9 (uncharacterized protein LOC111017195 OS=Momordica charantia OX=3673 GN=LOC111017195 PE=4 SV=1) HSP 1 Score: 235.0 bits (598), Expect = 1.9e-58 Identity = 117/134 (87.31%), Postives = 127/134 (94.78%), Query Frame = 0
BLAST of PI0020449 vs. ExPASy TrEMBL
Match: A0A6J1FVY0 (uncharacterized protein LOC111448604 OS=Cucurbita moschata OX=3662 GN=LOC111448604 PE=4 SV=1) HSP 1 Score: 233.4 bits (594), Expect = 5.5e-58 Identity = 119/134 (88.81%), Postives = 126/134 (94.03%), Query Frame = 0
BLAST of PI0020449 vs. ExPASy TrEMBL
Match: A0A6J1JDD5 (uncharacterized protein LOC111484003 OS=Cucurbita maxima OX=3661 GN=LOC111484003 PE=4 SV=1) HSP 1 Score: 228.4 bits (581), Expect = 1.8e-56 Identity = 117/134 (87.31%), Postives = 124/134 (92.54%), Query Frame = 0
BLAST of PI0020449 vs. ExPASy TrEMBL
Match: A0A0A0LIX5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G239380 PE=4 SV=1) HSP 1 Score: 224.9 bits (572), Expect = 1.9e-55 Identity = 113/118 (95.76%), Postives = 116/118 (98.31%), Query Frame = 0
BLAST of PI0020449 vs. NCBI nr
Match: KAA0045945.1 (uncharacterized protein E6C27_scaffold243G004890 [Cucumis melo var. makuwa] >TYK13641.1 uncharacterized protein E5676_scaffold299G001510 [Cucumis melo var. makuwa]) HSP 1 Score: 256.9 bits (655), Expect = 9.5e-65 Identity = 130/134 (97.01%), Postives = 133/134 (99.25%), Query Frame = 0
BLAST of PI0020449 vs. NCBI nr
Match: XP_022148561.1 (uncharacterized protein LOC111017195 [Momordica charantia]) HSP 1 Score: 235.0 bits (598), Expect = 3.9e-58 Identity = 117/134 (87.31%), Postives = 127/134 (94.78%), Query Frame = 0
BLAST of PI0020449 vs. NCBI nr
Match: XP_022944054.1 (uncharacterized protein LOC111448604 [Cucurbita moschata]) HSP 1 Score: 233.4 bits (594), Expect = 1.1e-57 Identity = 119/134 (88.81%), Postives = 126/134 (94.03%), Query Frame = 0
BLAST of PI0020449 vs. NCBI nr
Match: XP_023512236.1 (uncharacterized protein LOC111777025 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 231.9 bits (590), Expect = 3.3e-57 Identity = 118/134 (88.06%), Postives = 126/134 (94.03%), Query Frame = 0
BLAST of PI0020449 vs. NCBI nr
Match: XP_022986185.1 (uncharacterized protein LOC111484003 [Cucurbita maxima]) HSP 1 Score: 228.4 bits (581), Expect = 3.6e-56 Identity = 117/134 (87.31%), Postives = 124/134 (92.54%), Query Frame = 0
BLAST of PI0020449 vs. TAIR 10
Match: AT2G23690.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: petal differentiation and expansion stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G37240.1); Has 243 Blast hits to 243 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 241; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). ) HSP 1 Score: 92.0 bits (227), Expect = 3.8e-19 Identity = 43/109 (39.45%), Postives = 69/109 (63.30%), Query Frame = 0
BLAST of PI0020449 vs. TAIR 10
Match: AT4G37240.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G23690.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 89.0 bits (219), Expect = 3.2e-18 Identity = 44/106 (41.51%), Postives = 68/106 (64.15%), Query Frame = 0
BLAST of PI0020449 vs. TAIR 10
Match: AT5G66580.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G50800.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). ) HSP 1 Score: 79.7 bits (195), Expect = 1.9e-15 Identity = 41/109 (37.61%), Postives = 64/109 (58.72%), Query Frame = 0
BLAST of PI0020449 vs. TAIR 10
Match: AT3G50800.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G66580.1); Has 249 Blast hits to 249 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 249; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 78.2 bits (191), Expect = 5.7e-15 Identity = 43/109 (39.45%), Postives = 61/109 (55.96%), Query Frame = 0
BLAST of PI0020449 vs. TAIR 10
Match: AT1G76600.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: nucleolus, nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G21010.1); Has 220 Blast hits to 220 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 220; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 72.4 bits (176), Expect = 3.1e-13 Identity = 46/124 (37.10%), Postives = 73/124 (58.87%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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