PI0020329 (gene) Melon (PI 482460) v1

Overview


Name	PI0020329
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	protein LITTLE ZIPPER 1-like
Location	chr09: 2600981 .. 2601472 (-)
RNA-Seq Expression	PI0020329
Synteny	PI0020329

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTTTTCTTTCTGCCTCGTGAGTCTACACAGTCTATATAAGTGTGAGCTTCAACTTTCATACAATATTCTACTAGAAAGAAAGGCAAAAGTTAAGAAGCTGCCATAGAAGAATAATGTGCATCAGTGCAACACAGAGTGTTCTGTTTCATACAATTCAGAGTTCGAAGAACAGGAGAAGTTTAAAAAGATCAAAATTTCAAGTTCTGAGGCTTACAAGGTTGCTTTTTCACACAACCCCATTTAACCTTTTTGATGGTTTTTTAGAAGACTTTTGTTCATGGGTTTTGTTTTTTAATTTTAGCAGGAGGAGATGTGAAGAGAAGATGGGGAAGGATATTGAGCTGAAGAATCTGCAGCTATATCTGGAAAATCAGACCATAATTGAAGAGAATGAGAAACTAAGAGAGAAAGCCAATATCCTTCATCAAGAGAATTTGGCTTTATTGACTGAGTTTCAGAAAAAATTCCCACATTTGGAACAGAGAAAGTGA

mRNA sequence

TTTTTTCTTTCTGCCTCGTGAGTCTACACAGTCTATATAAGTGTGAGCTTCAACTTTCATACAATATTCTACTAGAAAGAAAGGCAAAAGTTAAGAAGCTGCCATAGAAGAATAATGTGCATCAGTGCAACACAGAGTGTTCTGTTTCATACAATTCAGAGTTCGAAGAACAGGAGAAGTTTAAAAAGATCAAAATTTCAAGTTCTGAGGCTTACAAGCAGGAGGAGATGTGAAGAGAAGATGGGGAAGGATATTGAGCTGAAGAATCTGCAGCTATATCTGGAAAATCAGACCATAATTGAAGAGAATGAGAAACTAAGAGAGAAAGCCAATATCCTTCATCAAGAGAATTTGGCTTTATTGACTGAGTTTCAGAAAAAATTCCCACATTTGGAACAGAGAAAGTGA

Coding sequence (CDS)

ATGTGCATCAGTGCAACACAGAGTGTTCTGTTTCATACAATTCAGAGTTCGAAGAACAGGAGAAGTTTAAAAAGATCAAAATTTCAAGTTCTGAGGCTTACAAGCAGGAGGAGATGTGAAGAGAAGATGGGGAAGGATATTGAGCTGAAGAATCTGCAGCTATATCTGGAAAATCAGACCATAATTGAAGAGAATGAGAAACTAAGAGAGAAAGCCAATATCCTTCATCAAGAGAATTTGGCTTTATTGACTGAGTTTCAGAAAAAATTCCCACATTTGGAACAGAGAAAGTGA

Protein sequence

MCISATQSVLFHTIQSSKNRRSLKRSKFQVLRLTSRRRCEEKMGKDIELKNLQLYLENQTIIEENEKLREKANILHQENLALLTEFQKKFPHLEQRK

Homology

[Close]

BLAST of PI0020329 vs. ExPASy Swiss-Prot
Match: Q9LZX5 (Protein LITTLE ZIPPER 2 OS=Arabidopsis thaliana OX=3702 GN=ZPR2 PE=1 SV=1)

HSP 1 Score: 53.9 bits (128), Expect = 1.2e-06
Identity = 34/84 (40.48%), Postives = 53/84 (63.10%), Query Frame = 0


Query: 7  QSVLFHTIQSSKNRRSLKRSKFQVLRLTSRRRCEEKMGKDIELKNLQLYLENQTIIEENE 66
          +S  +H    SK +  L+     +L LT RRR  ++  K++E++NL+L++ENQ+II ENE
Sbjct: 19 RSASYHIKHKSKTQTHLR-----ILNLTRRRRLLKEQ-KEMEMRNLKLFVENQSIIRENE 78

Query: 67 KLREKANILHQENLALLTEFQKKF 91
           L++KA +LH EN AL      K+
Sbjct: 79 ALKKKALLLHHENNALFALLHPKY 96

[Close]

BLAST of PI0020329 vs. ExPASy Swiss-Prot
Match: F4IG60 (Protein LITTLE ZIPPER 1 OS=Arabidopsis thaliana OX=3702 GN=ZPR1 PE=1 SV=1)

HSP 1 Score: 51.6 bits (122), Expect = 5.8e-06
Identity = 38/92 (41.30%), Postives = 56/92 (60.87%), Query Frame = 0


Query: 1   MCISATQSVLFHTIQSSKNRRSL---KRSKFQVLRLTSRRRCEEKMGKDIELKNLQLYLE 60
           MC+S+++     T   +  R  L    +S  ++ RL+ RRR   +  K +E+ NL+LY+E
Sbjct: 44  MCLSSSE-----TFSDTPTRLVLYLKTQSHVRIPRLSRRRRMWRE-EKKMEMINLKLYVE 103

Query: 61  NQTIIEENEKLREKANILHQENLALLTEFQKK 90
           NQ II ENEKL++KA +LHQEN  L +  Q K
Sbjct: 104 NQNIIRENEKLKKKALLLHQENKTLFSLLQTK 129

[Close]

BLAST of PI0020329 vs. ExPASy TrEMBL
Match: A0A0A0KKF8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G157390 PE=4 SV=1)

HSP 1 Score: 171.0 bits (432), Expect = 2.4e-39
Identity = 92/97 (94.85%), Postives = 94/97 (96.91%), Query Frame = 0


Query: 1  MCISATQSVLFHTIQSSKNRRSLKRSKFQVLRLTSRRRCEEKMGKDIELKNLQLYLENQT 60
          MC+SATQSVLFHTIQSSKNRRS KRS FQVLRLT RRRCEEK+GKDIELKNLQLYLENQT
Sbjct: 1  MCVSATQSVLFHTIQSSKNRRSSKRSNFQVLRLT-RRRCEEKLGKDIELKNLQLYLENQT 60

Query: 61 IIEENEKLREKANILHQENLALLTEFQKKFPHLEQRK 98
          IIEENEKLREKANILHQENLALLTEFQKKFPHLEQRK
Sbjct: 61 IIEENEKLREKANILHQENLALLTEFQKKFPHLEQRK 96

[Close]

BLAST of PI0020329 vs. ExPASy TrEMBL
Match: A0A6J1E3C5 (protein LITTLE ZIPPER 1-like OS=Cucurbita moschata OX=3662 GN=LOC111430426 PE=4 SV=1)

HSP 1 Score: 157.5 bits (397), Expect = 2.8e-35
Identity = 83/97 (85.57%), Postives = 91/97 (93.81%), Query Frame = 0


Query: 1  MCISATQSVLFHTIQSSKNRRSLKRSKFQVLRLTSRRRCEEKMGKDIELKNLQLYLENQT 60
          MCISATQS+LFH IQ+SKNRR  KRSK QVLRLT RRRCEEK+GKDIELKNLQLYL+NQT
Sbjct: 1  MCISATQSILFHQIQTSKNRRRSKRSKLQVLRLT-RRRCEEKLGKDIELKNLQLYLKNQT 60

Query: 61 IIEENEKLREKANILHQENLALLTEFQKKFPHLEQRK 98
          II+EN+KLREKANILHQEN+AL+TEFQKKFPHL QRK
Sbjct: 61 IIKENDKLREKANILHQENIALMTEFQKKFPHLNQRK 96

[Close]

BLAST of PI0020329 vs. ExPASy TrEMBL
Match: A0A6J1DZF5 (protein LITTLE ZIPPER 2-like isoform X2 OS=Momordica charantia OX=3673 GN=LOC111026023 PE=4 SV=1)

HSP 1 Score: 145.2 bits (365), Expect = 1.4e-31
Identity = 79/96 (82.29%), Postives = 86/96 (89.58%), Query Frame = 0


Query: 1   MCISATQSVLFHTIQSSKNRRSLKRSKFQVLRLTSRRRC-EEKMGKDIELKNLQLYLENQ 60
           MCISAT+S  FH I +SKNRR LKRSK QV RLTSRRRC EEK+GKDIELKNLQLYLENQ
Sbjct: 17  MCISATESSPFHQIHTSKNRRRLKRSKLQVQRLTSRRRCTEEKVGKDIELKNLQLYLENQ 76

Query: 61  TIIEENEKLREKANILHQENLALLTEFQKKFPHLEQ 96
           TIIEENEKLRE+ANILHQENLAL+TE QKKF HL++
Sbjct: 77  TIIEENEKLRERANILHQENLALMTELQKKFQHLDR 112

[Close]

BLAST of PI0020329 vs. ExPASy TrEMBL
Match: A0A6J1E319 (protein LITTLE ZIPPER 2-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC111026023 PE=4 SV=1)

HSP 1 Score: 141.0 bits (354), Expect = 2.7e-30
Identity = 76/95 (80.00%), Postives = 83/95 (87.37%), Query Frame = 0


Query: 1   MCISATQSVLFHTIQSSKNRRSLKRSKFQVLRLTSRRRCEEKMGKDIELKNLQLYLENQT 60
           MCISAT+S  FH I +SKNRR LKRSK QV RLT RR  EEK+GKDIELKNLQLYLENQT
Sbjct: 17  MCISATESSPFHQIHTSKNRRRLKRSKLQVQRLTRRRCTEEKVGKDIELKNLQLYLENQT 76

Query: 61  IIEENEKLREKANILHQENLALLTEFQKKFPHLEQ 96
           IIEENEKLRE+ANILHQENLAL+TE QKKF HL++
Sbjct: 77  IIEENEKLRERANILHQENLALMTELQKKFQHLDR 111

[Close]

BLAST of PI0020329 vs. ExPASy TrEMBL
Match: A0A5J4ZU38 (Uncharacterized protein OS=Nyssa sinensis OX=561372 GN=F0562_012976 PE=4 SV=1)

HSP 1 Score: 112.5 bits (280), Expect = 1.0e-21
Identity = 64/101 (63.37%), Postives = 82/101 (81.19%), Query Frame = 0


Query: 1   MCISATQSVLF----HTIQSSKNR-RSLKRSKFQVLRLTSR-RRCEEKMGKDIELKNLQL 60
           MCIS T+ +       T+ SS+ + RS KRSK QV RLT R RRCEEK+GKD++LKNL+L
Sbjct: 1   MCISGTEWINLRFPPRTLHSSRRKHRSKKRSKVQVHRLTRRKRRCEEKVGKDMKLKNLKL 60

Query: 61  YLENQTIIEENEKLREKANILHQENLALLTEFQKKFPHLEQ 96
           Y+EN +I+EENEKLR+KAN+LHQENLAL++EFQKKF HL++
Sbjct: 61  YMENMSILEENEKLRKKANLLHQENLALMSEFQKKFSHLDR 101

[Close]

BLAST of PI0020329 vs. NCBI nr
Match: KAE8647881.1 (hypothetical protein Csa_000025 [Cucumis sativus])

HSP 1 Score: 177.2 bits (448), Expect = 7.0e-41
Identity = 93/97 (95.88%), Postives = 95/97 (97.94%), Query Frame = 0


Query: 1  MCISATQSVLFHTIQSSKNRRSLKRSKFQVLRLTSRRRCEEKMGKDIELKNLQLYLENQT 60
          MC+SATQSVLFHTIQSSKNRRS KRS FQVLRLTSRRRCEEK+GKDIELKNLQLYLENQT
Sbjct: 1  MCVSATQSVLFHTIQSSKNRRSSKRSNFQVLRLTSRRRCEEKLGKDIELKNLQLYLENQT 60

Query: 61 IIEENEKLREKANILHQENLALLTEFQKKFPHLEQRK 98
          IIEENEKLREKANILHQENLALLTEFQKKFPHLEQRK
Sbjct: 61 IIEENEKLREKANILHQENLALLTEFQKKFPHLEQRK 97

[Close]

BLAST of PI0020329 vs. NCBI nr
Match: XP_022922429.1 (protein LITTLE ZIPPER 1-like [Cucurbita moschata])

HSP 1 Score: 157.5 bits (397), Expect = 5.7e-35
Identity = 83/97 (85.57%), Postives = 91/97 (93.81%), Query Frame = 0


Query: 1  MCISATQSVLFHTIQSSKNRRSLKRSKFQVLRLTSRRRCEEKMGKDIELKNLQLYLENQT 60
          MCISATQS+LFH IQ+SKNRR  KRSK QVLRLT RRRCEEK+GKDIELKNLQLYL+NQT
Sbjct: 1  MCISATQSILFHQIQTSKNRRRSKRSKLQVLRLT-RRRCEEKLGKDIELKNLQLYLKNQT 60

Query: 61 IIEENEKLREKANILHQENLALLTEFQKKFPHLEQRK 98
          II+EN+KLREKANILHQEN+AL+TEFQKKFPHL QRK
Sbjct: 61 IIKENDKLREKANILHQENIALMTEFQKKFPHLNQRK 96

[Close]

BLAST of PI0020329 vs. NCBI nr
Match: KAG6579456.1 (Protein LITTLE ZIPPER 2, partial [Cucurbita argyrosperma subsp. sororia] >KAG7016928.1 Protein LITTLE ZIPPER 2 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 154.5 bits (389), Expect = 4.8e-34
Identity = 81/97 (83.51%), Postives = 90/97 (92.78%), Query Frame = 0


Query: 1  MCISATQSVLFHTIQSSKNRRSLKRSKFQVLRLTSRRRCEEKMGKDIELKNLQLYLENQT 60
          MCI ATQS+LFH IQ+SKN+R  KRSK QVLRLT RRRCEEK+GKDIELKNLQLYL+NQT
Sbjct: 1  MCIRATQSILFHQIQTSKNKRRSKRSKLQVLRLT-RRRCEEKLGKDIELKNLQLYLKNQT 60

Query: 61 IIEENEKLREKANILHQENLALLTEFQKKFPHLEQRK 98
          II+EN+KLREKANILHQEN+AL+TEFQKKFPHL QRK
Sbjct: 61 IIKENDKLREKANILHQENIALMTEFQKKFPHLNQRK 96

[Close]

BLAST of PI0020329 vs. NCBI nr
Match: KAG7036101.1 (Protein LITTLE ZIPPER 2, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 150.2 bits (378), Expect = 9.1e-33
Identity = 81/98 (82.65%), Postives = 87/98 (88.78%), Query Frame = 0


Query: 1  MCISATQSVLFHTIQSSKNRRSLKRSKFQVLRLTSRRRC-EEKMGKDIELKNLQLYLENQ 60
          MCI+ATQ +LFH I +SKNRR LKRSK QV RL+SRRR  EEK GKDIELKNLQLYLENQ
Sbjct: 1  MCITATQRILFHQIHTSKNRRRLKRSKLQVQRLSSRRRSFEEKQGKDIELKNLQLYLENQ 60

Query: 61 TIIEENEKLREKANILHQENLALLTEFQKKFPHLEQRK 98
          TIIEENEKLREKANILHQENLAL+TEF KKFPH +QRK
Sbjct: 61 TIIEENEKLREKANILHQENLALMTEFHKKFPHFDQRK 98

[Close]

BLAST of PI0020329 vs. NCBI nr
Match: XP_023534553.1 (protein LITTLE ZIPPER 2-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 150.2 bits (378), Expect = 9.1e-33
Identity = 79/97 (81.44%), Postives = 85/97 (87.63%), Query Frame = 0


Query: 1  MCISATQSVLFHTIQSSKNRRSLKRSKFQVLRLTSRRRCEEKMGKDIELKNLQLYLENQT 60
          MCI+ATQ +LFH I +SKNRR LKRSK QV RL+ RR  EEK GKDIELKNLQLYLENQT
Sbjct: 1  MCITATQRILFHQIHTSKNRRRLKRSKLQVQRLSRRRSFEEKQGKDIELKNLQLYLENQT 60

Query: 61 IIEENEKLREKANILHQENLALLTEFQKKFPHLEQRK 98
          IIEENEKLREKANILHQENLAL+TEF KKFPH +QRK
Sbjct: 61 IIEENEKLREKANILHQENLALMTEFHKKFPHFDQRK 97

[Close]

BLAST of PI0020329 vs. TAIR 10
Match: AT3G60890.2 (protein binding )

HSP 1 Score: 58.5 bits (140), Expect = 3.4e-09
Identity = 36/84 (42.86%), Postives = 53/84 (63.10%), Query Frame = 0


Query: 7  QSVLFHTIQSSKNRRSLKRSKFQVLRLTSRRRCEEKMGKDIELKNLQLYLENQTIIEENE 66
          +S  +H    SK +  L+     +L LTSRRR   K  K++E++NL+L++ENQ+II ENE
Sbjct: 19 RSASYHIKHKSKTQTHLR-----ILNLTSRRRRLLKEQKEMEMRNLKLFVENQSIIRENE 78

Query: 67 KLREKANILHQENLALLTEFQKKF 91
           L++KA +LH EN AL      K+
Sbjct: 79 ALKKKALLLHHENNALFALLHPKY 97

[Close]

BLAST of PI0020329 vs. TAIR 10
Match: AT3G60890.1 (protein binding )

HSP 1 Score: 53.9 bits (128), Expect = 8.3e-08
Identity = 34/84 (40.48%), Postives = 53/84 (63.10%), Query Frame = 0


Query: 7  QSVLFHTIQSSKNRRSLKRSKFQVLRLTSRRRCEEKMGKDIELKNLQLYLENQTIIEENE 66
          +S  +H    SK +  L+     +L LT RRR  ++  K++E++NL+L++ENQ+II ENE
Sbjct: 19 RSASYHIKHKSKTQTHLR-----ILNLTRRRRLLKEQ-KEMEMRNLKLFVENQSIIRENE 78

Query: 67 KLREKANILHQENLALLTEFQKKF 91
           L++KA +LH EN AL      K+
Sbjct: 79 ALKKKALLLHHENNALFALLHPKY 96

[Close]

BLAST of PI0020329 vs. TAIR 10
Match: AT2G45450.1 (protein binding )

HSP 1 Score: 51.6 bits (122), Expect = 4.1e-07
Identity = 38/92 (41.30%), Postives = 56/92 (60.87%), Query Frame = 0


Query: 1   MCISATQSVLFHTIQSSKNRRSL---KRSKFQVLRLTSRRRCEEKMGKDIELKNLQLYLE 60
           MC+S+++     T   +  R  L    +S  ++ RL+ RRR   +  K +E+ NL+LY+E
Sbjct: 44  MCLSSSE-----TFSDTPTRLVLYLKTQSHVRIPRLSRRRRMWRE-EKKMEMINLKLYVE 103

Query: 61  NQTIIEENEKLREKANILHQENLALLTEFQKK 90
           NQ II ENEKL++KA +LHQEN  L +  Q K
Sbjct: 104 NQNIIRENEKLKKKALLLHQENKTLFSLLQTK 129

The following BLAST results are available for this feature:

BLAST of PI0020329 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LZX5	1.2e-06	40.48	Protein LITTLE ZIPPER 2 OS=Arabidopsis thaliana OX=3702 GN=ZPR2 PE=1 SV=1	[more]
F4IG60	5.8e-06	41.30	Protein LITTLE ZIPPER 1 OS=Arabidopsis thaliana OX=3702 GN=ZPR1 PE=1 SV=1	[more]

BLAST of PI0020329 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KKF8	2.4e-39	94.85	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G157390 PE=4 SV=1	[more]
A0A6J1E3C5	2.8e-35	85.57	protein LITTLE ZIPPER 1-like OS=Cucurbita moschata OX=3662 GN=LOC111430426 PE=4 ...	[more]
A0A6J1DZF5	1.4e-31	82.29	protein LITTLE ZIPPER 2-like isoform X2 OS=Momordica charantia OX=3673 GN=LOC111...	[more]
A0A6J1E319	2.7e-30	80.00	protein LITTLE ZIPPER 2-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC111...	[more]
A0A5J4ZU38	1.0e-21	63.37	Uncharacterized protein OS=Nyssa sinensis OX=561372 GN=F0562_012976 PE=4 SV=1	[more]

BLAST of PI0020329 vs. NCBI nr


Match Name	E-value	Identity	Description
KAE8647881.1	7.0e-41	95.88	hypothetical protein Csa_000025 [Cucumis sativus]	[more]
XP_022922429.1	5.7e-35	85.57	protein LITTLE ZIPPER 1-like [Cucurbita moschata]	[more]
KAG6579456.1	4.8e-34	83.51	Protein LITTLE ZIPPER 2, partial [Cucurbita argyrosperma subsp. sororia] >KAG701...	[more]
KAG7036101.1	9.1e-33	82.65	Protein LITTLE ZIPPER 2, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_023534553.1	9.1e-33	81.44	protein LITTLE ZIPPER 2-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of PI0020329 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G60890.2	3.4e-09	42.86	protein binding	[more]
AT3G60890.1	8.3e-08	40.48	protein binding	[more]
AT2G45450.1	4.1e-07	41.30	protein binding	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 58..85
None	No IPR available	PANTHER	PTHR33601:SF21	OS09G0520500 PROTEIN	coord: 1..94
IPR039312	Protein LITTLE ZIPPER	PANTHER	PTHR33601	PROTEIN LITTLE ZIPPER 4	coord: 1..94

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0020329.1	PI0020329.1	mRNA