PI0020245 (gene) Melon (PI 482460) v1

Overview


Name	PI0020245
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	Protein MNN4-like
Location	chr06: 19822995 .. 19823693 (-)
RNA-Seq Expression	PI0020245
Synteny	PI0020245

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTGCCCCCTCTGAGAAGCAAACCAACACACTAAGGAGGTATTTAACCTCGAAGCCTTCCCAATCCTGCAAAGTAACAGAAGCCCAAAAAAAGGAAATGGGAAAGGCCGTACTAAAGCAACTTCAGATCCAAGGTCTCGATGCGGACTTGGAAGATGAAGATGTTGATTTGGTTGAATTTCTGGCCGCAAAGATGGAAGCCAGAAAAGAGAGAAAAGAAGAGGAGGAAAGAAGATCGCAAAAAGAACGTTGCGGACTACGCGACGAAGGCAATAGGCGAAGAGAAGAGGAATCAAGAAGGAAAGAAACGTAGTCCTTTTTGCCTATTGCGGACACAAAATTTGAGAGAGTTGCGAAGAAGGCCCTTAAGAAGAAGGAGAAAGTGGTCGAAGGAATAACCAAGGTCAAAGAAGCTGCACAGAAAGTGAAAGCTCTCGCGAAGGCGAGAAAAGATGAAAGGTTGCGAGAGGAGGAGGAGCTCCACAACAGAGTGGACAAAGTTTTCCCTTTGGCGGACAAGGGGAAGGCGACAAGAACCCTCAATGATAAGACTATTGAGGAATTCGAGAAGGAATTGGAGGAAATGAGTCCTTTAAAGGACGAAGTGGTGAATGCTAAGAGGCTTTTATTCTTCGAAAAAATTATGGGGCAAAATGTTGAGCGTGACACTAAGGTGGATTACGTTTGCCACCCCTAA

mRNA sequence

ATGGCTGCCCCCTCTGAGAAGCAAACCAACACACTAAGGAGGTATTTAACCTCGAAGCCTTCCCAATCCTGCAAAGTAACAGAAGCCCAAAAAAAGGAAATGGGAAAGGCCGTACTAAAGCAACTTCAGATCCAAGGTCTCGATGCGGACTTGGAAGATGAAGATGTTGATTTGGTTGAATTTCTGGCCTCCTTTTTGCCTATTGCGGACACAAAATTTGAGAGAGTTGCGAAGAAGGCCCTTAAGAAGAAGGAGAAAGTGGTCGAAGGAATAACCAAGGTCAAAGAAGCTGCACAGAAAGTGAAAGCTCTCGCGAAGGCGAGAAAAGATGAAAGGTTGCGAGAGGAGGAGGAGCTCCACAACAGAGTGGACAAAGTTTTCCCTTTGGCGGACAAGGGGAAGGCGACAAGAACCCTCAATGATAAGACTATTGAGGAATTCGAGAAGGAATTGGAGGAAATGAGTCCTTTAAAGGACGAAGTGGTGAATGCTAAGAGGCTTTTATTCTTCGAAAAAATTATGGGGCAAAATGTTGAGCGTGACACTAAGGTGGATTACGTTTGCCACCCCTAA

Coding sequence (CDS)

ATGGCTGCCCCCTCTGAGAAGCAAACCAACACACTAAGGAGGTATTTAACCTCGAAGCCTTCCCAATCCTGCAAAGTAACAGAAGCCCAAAAAAAGGAAATGGGAAAGGCCGTACTAAAGCAACTTCAGATCCAAGGTCTCGATGCGGACTTGGAAGATGAAGATGTTGATTTGGTTGAATTTCTGGCCTCCTTTTTGCCTATTGCGGACACAAAATTTGAGAGAGTTGCGAAGAAGGCCCTTAAGAAGAAGGAGAAAGTGGTCGAAGGAATAACCAAGGTCAAAGAAGCTGCACAGAAAGTGAAAGCTCTCGCGAAGGCGAGAAAAGATGAAAGGTTGCGAGAGGAGGAGGAGCTCCACAACAGAGTGGACAAAGTTTTCCCTTTGGCGGACAAGGGGAAGGCGACAAGAACCCTCAATGATAAGACTATTGAGGAATTCGAGAAGGAATTGGAGGAAATGAGTCCTTTAAAGGACGAAGTGGTGAATGCTAAGAGGCTTTTATTCTTCGAAAAAATTATGGGGCAAAATGTTGAGCGTGACACTAAGGTGGATTACGTTTGCCACCCCTAA

Protein sequence

MAAPSEKQTNTLRRYLTSKPSQSCKVTEAQKKEMGKAVLKQLQIQGLDADLEDEDVDLVEFLASFLPIADTKFERVAKKALKKKEKVVEGITKVKEAAQKVKALAKARKDERLREEEELHNRVDKVFPLADKGKATRTLNDKTIEEFEKELEEMSPLKDEVVNAKRLLFFEKIMGQNVERDTKVDYVCHP

Homology

[Close]

BLAST of PI0020245 vs. ExPASy TrEMBL
Match: A0A5D3BNL6 (Protein MNN4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1923G00100 PE=4 SV=1)

HSP 1 Score: 85.9 bits (211), Expect = 2.0e-13
Identity = 48/93 (51.61%), Postives = 70/93 (75.27%), Query Frame = 0


Query: 68  IADTKFERVAKKALKKKEKVVEGITKVKEAAQKVKALAKARKDERLREEEELHNRVDKVF 127
           IA T+FERVA+KA KKKEKVV G+ K+K   Q  KAL + +K+ +LRE+EEL N++DKV 
Sbjct: 89  IAPTEFERVARKAQKKKEKVVSGLLKMKVIVQGAKALTQEKKEVKLREQEELLNKIDKVP 148

Query: 128 PLADKGKATRTLNDKTIEEFEKELEEMSPLKDE 161
             A K K   TL+++ +EEF++EL+ +SPL+++
Sbjct: 149 LFAKKRKVKNTLSEELVEEFKRELDNLSPLEEK 181

[Close]

BLAST of PI0020245 vs. ExPASy TrEMBL
Match: A0A5D3DQP9 (Protein MNN4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold425G00060 PE=4 SV=1)

HSP 1 Score: 79.0 bits (193), Expect = 2.4e-11
Identity = 62/178 (34.83%), Postives = 99/178 (55.62%), Query Frame = 0


Query: 5   SEKQTNTLRRYLTSKPSQSCKVTEAQKKEMGKAVLKQLQ------IQGLDADLEDEDVDL 64
           + K+TNT++R+LTSK +QS +  +  K     +VL+Q Q        G   + ED  +DL
Sbjct: 2   ANKKTNTIKRFLTSKHTQSQE--QIDKVRFTGSVLEQPQPSHNPLPDGSGGNFED-SIDL 61

Query: 65  VEFLASFL----------PIADTKFERVAKKALKKKEKVVEGITKVKEAAQKVKALAKAR 124
              LA  +          PI  T+ ER+A+KA +KKEKV   + KVK   Q  KA  + +
Sbjct: 62  NRILAQGVGSVGQEQASSPITPTELERIARKAHEKKEKVTSSLLKVKVTTQGAKAFVQEK 121

Query: 125 KDERLREEEELHNRVDKVFPLADKGKATRTLNDKTIEEFEKELEEMSPLKDEVVNAKR 167
           K+ +LRE +EL N++D+V   A+KGK  +T ++K  EEF+  + +    +D+ +  K+
Sbjct: 122 KEVKLREWDELFNKIDQVTLPAEKGKMRKTPSEKIYEEFKGTIRQEKKTEDKCLETKK 176

[Close]

BLAST of PI0020245 vs. ExPASy TrEMBL
Match: A0A5D3BFC8 (Protein MNN4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1251G00900 PE=4 SV=1)

HSP 1 Score: 77.8 bits (190), Expect = 5.5e-11
Identity = 57/159 (35.85%), Postives = 97/159 (61.01%), Query Frame = 0


Query: 6   EKQTNTLRRYLTSKPSQ---SCKVTEAQKKEMGKAVLKQLQIQGL--DADLEDEDVDLVE 65
           +K+ N +R  L  +  +     +  E +KK+  +   K+ +I+      + E+++ ++ E
Sbjct: 60  DKEENFIRERLDQEEKEKKDKLRKEEEEKKKRKEVEKKKKKIEEKVHKEEQEEQEEEVCE 119

Query: 66  FLASFLPIADTKFERVAKKALKKKEKVVEGITKVKEAAQKVKALAKARKDERLREEEELH 125
             AS +PIA  KF+RV++KA K+KEKV   + K+K  AQ VKALA+ +K+ +L+E++EL 
Sbjct: 120 ISAS-MPIAKIKFDRVSRKAQKEKEKVKTRLLKIKVKAQGVKALAEEKKEIKLKEQKELL 179

Query: 126 NRVDKVFPLADKGKATRTLNDKTIEEFEKELEEMSPLKD 160
           N+V+K+    +  K      ++  EEFEKE+ E+SPLKD
Sbjct: 180 NKVNKLALSVENSKEKEKTFEEYCEEFEKEISELSPLKD 217

[Close]

BLAST of PI0020245 vs. ExPASy TrEMBL
Match: A0A5A7SSF1 (Protein MNN4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold452G00120 PE=4 SV=1)

HSP 1 Score: 75.1 bits (183), Expect = 3.5e-10
Identity = 60/165 (36.36%), Postives = 93/165 (56.36%), Query Frame = 0


Query: 5   SEKQTNTLRRYLTSKPSQSCKVTEAQKKEMGKAVLKQLQ------IQGLDADLEDEDVDL 64
           + K+TNT++R+LTSK +QS +  +  K     +VL+Q Q        G   + ED  +DL
Sbjct: 2   ANKKTNTIKRFLTSKHTQSQE--QIDKVRFTGSVLEQPQPSHNPLPDGSGGNFED-SIDL 61

Query: 65  VEFLASFL----------PIADTKFERVAKKALKKKEKVVEGITKVKEAAQKVKALAKAR 124
              LA  +          PI  T+ ER+A+KA +KKEKV   + KVK   Q  KA  + +
Sbjct: 62  NRILAQGVGSVGQEQASSPITPTELERIARKAHEKKEKVTSSLLKVKVTTQGAKAFVQEK 121

Query: 125 KDERLREEEELHNRVDKVFPLADKGKATRTLNDKTIEEFEKELEE 154
           K+ +LRE +EL N++D+V   A+KGK  +T ++K  EEF+  + +
Sbjct: 122 KEVKLREWDELFNKIDQVTLPAEKGKMRKTPSEKIYEEFKGTIRQ 163

[Close]

BLAST of PI0020245 vs. ExPASy TrEMBL
Match: A0A5A7TGV4 (Protein MNN4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold32G00910 PE=4 SV=1)

HSP 1 Score: 72.0 bits (175), Expect = 3.0e-09
Identity = 43/95 (45.26%), Postives = 63/95 (66.32%), Query Frame = 0


Query: 68  IADTKFERVAKKALKKKEKVVEGITKVKEAAQKVKALAKARKDERLREEEELHNRVDKVF 127
           +  T+FERV  KA +K EKV   + K+K  AQ+  ALA+ +K+ +LR+ EEL N+VDK+ 
Sbjct: 1   MVQTEFERVVNKAQEKTEKVRARLLKIKVKAQRAMALAEGKKEIKLRQPEELLNKVDKLA 60

Query: 128 PLADKGKATRTLNDKTIEEFEKELEEMSPLKDEVV 163
              +KGK      ++  +EFEKE++E SPL+D VV
Sbjct: 61  LSVEKGKEKEKTFEEFYKEFEKEIDEFSPLEDNVV 95

[Close]

BLAST of PI0020245 vs. NCBI nr
Match: TYK00332.1 (protein MNN4-like [Cucumis melo var. makuwa])

HSP 1 Score: 85.9 bits (211), Expect = 4.1e-13
Identity = 48/93 (51.61%), Postives = 70/93 (75.27%), Query Frame = 0


Query: 68  IADTKFERVAKKALKKKEKVVEGITKVKEAAQKVKALAKARKDERLREEEELHNRVDKVF 127
           IA T+FERVA+KA KKKEKVV G+ K+K   Q  KAL + +K+ +LRE+EEL N++DKV 
Sbjct: 89  IAPTEFERVARKAQKKKEKVVSGLLKMKVIVQGAKALTQEKKEVKLREQEELLNKIDKVP 148

Query: 128 PLADKGKATRTLNDKTIEEFEKELEEMSPLKDE 161
             A K K   TL+++ +EEF++EL+ +SPL+++
Sbjct: 149 LFAKKRKVKNTLSEELVEEFKRELDNLSPLEEK 181

[Close]

BLAST of PI0020245 vs. NCBI nr
Match: TYK25983.1 (protein MNN4-like [Cucumis melo var. makuwa])

HSP 1 Score: 79.0 bits (193), Expect = 5.1e-11
Identity = 62/178 (34.83%), Postives = 99/178 (55.62%), Query Frame = 0


Query: 5   SEKQTNTLRRYLTSKPSQSCKVTEAQKKEMGKAVLKQLQ------IQGLDADLEDEDVDL 64
           + K+TNT++R+LTSK +QS +  +  K     +VL+Q Q        G   + ED  +DL
Sbjct: 2   ANKKTNTIKRFLTSKHTQSQE--QIDKVRFTGSVLEQPQPSHNPLPDGSGGNFED-SIDL 61

Query: 65  VEFLASFL----------PIADTKFERVAKKALKKKEKVVEGITKVKEAAQKVKALAKAR 124
              LA  +          PI  T+ ER+A+KA +KKEKV   + KVK   Q  KA  + +
Sbjct: 62  NRILAQGVGSVGQEQASSPITPTELERIARKAHEKKEKVTSSLLKVKVTTQGAKAFVQEK 121

Query: 125 KDERLREEEELHNRVDKVFPLADKGKATRTLNDKTIEEFEKELEEMSPLKDEVVNAKR 167
           K+ +LRE +EL N++D+V   A+KGK  +T ++K  EEF+  + +    +D+ +  K+
Sbjct: 122 KEVKLREWDELFNKIDQVTLPAEKGKMRKTPSEKIYEEFKGTIRQEKKTEDKCLETKK 176

[Close]

BLAST of PI0020245 vs. NCBI nr
Match: TYJ97774.1 (protein MNN4-like [Cucumis melo var. makuwa])

HSP 1 Score: 77.8 bits (190), Expect = 1.1e-10
Identity = 57/159 (35.85%), Postives = 97/159 (61.01%), Query Frame = 0


Query: 6   EKQTNTLRRYLTSKPSQ---SCKVTEAQKKEMGKAVLKQLQIQGL--DADLEDEDVDLVE 65
           +K+ N +R  L  +  +     +  E +KK+  +   K+ +I+      + E+++ ++ E
Sbjct: 60  DKEENFIRERLDQEEKEKKDKLRKEEEEKKKRKEVEKKKKKIEEKVHKEEQEEQEEEVCE 119

Query: 66  FLASFLPIADTKFERVAKKALKKKEKVVEGITKVKEAAQKVKALAKARKDERLREEEELH 125
             AS +PIA  KF+RV++KA K+KEKV   + K+K  AQ VKALA+ +K+ +L+E++EL 
Sbjct: 120 ISAS-MPIAKIKFDRVSRKAQKEKEKVKTRLLKIKVKAQGVKALAEEKKEIKLKEQKELL 179

Query: 126 NRVDKVFPLADKGKATRTLNDKTIEEFEKELEEMSPLKD 160
           N+V+K+    +  K      ++  EEFEKE+ E+SPLKD
Sbjct: 180 NKVNKLALSVENSKEKEKTFEEYCEEFEKEISELSPLKD 217

[Close]

BLAST of PI0020245 vs. NCBI nr
Match: KAA0032115.1 (protein MNN4-like [Cucumis melo var. makuwa])

HSP 1 Score: 75.1 bits (183), Expect = 7.3e-10
Identity = 60/165 (36.36%), Postives = 93/165 (56.36%), Query Frame = 0


Query: 5   SEKQTNTLRRYLTSKPSQSCKVTEAQKKEMGKAVLKQLQ------IQGLDADLEDEDVDL 64
           + K+TNT++R+LTSK +QS +  +  K     +VL+Q Q        G   + ED  +DL
Sbjct: 2   ANKKTNTIKRFLTSKHTQSQE--QIDKVRFTGSVLEQPQPSHNPLPDGSGGNFED-SIDL 61

Query: 65  VEFLASFL----------PIADTKFERVAKKALKKKEKVVEGITKVKEAAQKVKALAKAR 124
              LA  +          PI  T+ ER+A+KA +KKEKV   + KVK   Q  KA  + +
Sbjct: 62  NRILAQGVGSVGQEQASSPITPTELERIARKAHEKKEKVTSSLLKVKVTTQGAKAFVQEK 121

Query: 125 KDERLREEEELHNRVDKVFPLADKGKATRTLNDKTIEEFEKELEE 154
           K+ +LRE +EL N++D+V   A+KGK  +T ++K  EEF+  + +
Sbjct: 122 KEVKLREWDELFNKIDQVTLPAEKGKMRKTPSEKIYEEFKGTIRQ 163

[Close]

BLAST of PI0020245 vs. NCBI nr
Match: KAA0041276.1 (protein MNN4-like [Cucumis melo var. makuwa] >TYK16072.1 protein MNN4-like [Cucumis melo var. makuwa])

HSP 1 Score: 72.0 bits (175), Expect = 6.2e-09
Identity = 43/95 (45.26%), Postives = 63/95 (66.32%), Query Frame = 0


Query: 68  IADTKFERVAKKALKKKEKVVEGITKVKEAAQKVKALAKARKDERLREEEELHNRVDKVF 127
           +  T+FERV  KA +K EKV   + K+K  AQ+  ALA+ +K+ +LR+ EEL N+VDK+ 
Sbjct: 1   MVQTEFERVVNKAQEKTEKVRARLLKIKVKAQRAMALAEGKKEIKLRQPEELLNKVDKLA 60

Query: 128 PLADKGKATRTLNDKTIEEFEKELEEMSPLKDEVV 163
              +KGK      ++  +EFEKE++E SPL+D VV
Sbjct: 61  LSVEKGKEKEKTFEEFYKEFEKEIDEFSPLEDNVV 95

The following BLAST results are available for this feature:

BLAST of PI0020245 vs.


Match Name	E-value	Identity	Description

BLAST of PI0020245 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BNL6	2.0e-13	51.61	Protein MNN4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1923G0...	[more]
A0A5D3DQP9	2.4e-11	34.83	Protein MNN4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold425G00...	[more]
A0A5D3BFC8	5.5e-11	35.85	Protein MNN4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1251G0...	[more]
A0A5A7SSF1	3.5e-10	36.36	Protein MNN4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold452G00...	[more]
A0A5A7TGV4	3.0e-09	45.26	Protein MNN4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold32G009...	[more]

BLAST of PI0020245 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK00332.1	4.1e-13	51.61	protein MNN4-like [Cucumis melo var. makuwa]	[more]
TYK25983.1	5.1e-11	34.83	protein MNN4-like [Cucumis melo var. makuwa]	[more]
TYJ97774.1	1.1e-10	35.85	protein MNN4-like [Cucumis melo var. makuwa]	[more]
KAA0032115.1	7.3e-10	36.36	protein MNN4-like [Cucumis melo var. makuwa]	[more]
KAA0041276.1	6.2e-09	45.26	protein MNN4-like [Cucumis melo var. makuwa] >TYK16072.1 protein MNN4-like [Cucu...	[more]

BLAST of PI0020245 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..24

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0020245.1	PI0020245.1	mRNA