PI0020219 (gene) Melon (PI 482460) v1

Overview
NamePI0020219
Typegene
OrganismCucumis metuliferus (Melon (PI 482460) v1)
DescriptionACT domain-containing protein
Locationchr08: 14554238 .. 14556090 (-)
RNA-Seq ExpressionPI0020219
SyntenyPI0020219
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ACAAGAGAAAGCAAGAAGCTGCGGTGGCGCGTGAAGGAGACAGACGGCGGCGTTTGCGATAATAAATTTCTCCTGTGGCCGTGAAATGGGTTCTAGAGAGCGAAAGAAAGCAGCAGCTAATTCTTCTCATCACAAGTCTAAAGAATTTCGTGCATCCACAAGCTCTAGTGCTGTACTTCTCTCATCATTCAATTATTATTTTTTCTTCAATTTCTTTCTTTAATTTCTAGATTTTTCAACTTCTTTTTTCTCAAATTCGATCCAATCACCAGTTCCACTGGTTTATTGTCTATTTGAAATAATTGTTTTTGCTTCATCAAATTTTCATCACAACTGAGAGTAGTGTCATATTTTAGCCATCTTGGTTACTAATATATTTGTCTGCAGTCAAATGAATAATCTTTAATTGCTCCATCAATATTTATATTAGTTTGATTCAATTGATTTTCTAATGATTGTTCAATTATTAGAGAGAAAAAAGGATAAGAAAAACTTTTATATTAAAAAAATTGGTGAGAAATTAATAAGAATTTCTCATGACTTTGTTGGGCAAAACTGAAAATTTTGACACATTTTTTATCTACTAAATTCTCTTGGAAACATTAAAATAGAGAAGGGGTTATATTATGGAAATAATTGAATTTATTTACTAGAATCAATATAACACATAGATTTATTAATATGGAAAATTAAGTATCTGAATTCAAATGATTATAGTTATTAATTGAACCAATTTTGAACATGTGCAGGTGGTGAATGTGGAGAGTCTAGAGAGGGGTTTTCTAATAAATGTATTTTTGGAAAGAAATTCACCTGGATTGCTAGTTCGGATTCTAGAAGCGTTTGAGAAATTAGGACTTGAAGTCCTCGATGCTAACGTATCTTGTTCCGATTGTTTCCAACTCCAAGCTGTAGGAGAAGAGGTCTGATCTCTCACCCTCAATTAAAAGTATATTACATTATTCTTTTTTTTTTCTAATTGAAACTTCGATTCTTACCTTCATATGATTTATACTTAAAAACAATCAAAGCAAAATCTGATTAATATAAATGATGATTACCTATGTTTTAAATGTATGTAAATGTCCGTTTCTCATCTCTACATTTACAAACACATTTGTTTTCATCCAAAATATTTTGGTGTATAATATTTGGTTTAGTTTTTTTTTATTTTTTTTGTTTACAGAATGAAGGGAGAAAAATCATAAAGGCCCAAGTGGTGAAAAATGCAGTAAAGCAAGCAATCAAGGAATGGAGTGAAAGTGATGGGCAGGCATGAATTATATATATAAATATAAATATTTATAATTACAATTATATTTATTTTCCTTCTTTTTTTTTTTCCTTTTTTCCCAAACAGAACATCACTTCTGTGTATAGGGTAACCAAAATTTTCAACTCTCTTTCAAGTGTAGGATTTAAAATATCTTCAACCAAAAAGGAAAAAAAAAAAAAAGTATTATTTCTTCTCAAAACCCTTAGAAGAAATTCATAAATTTGTTTTTTTTTTTCTTTCCATTTTGTTTGTTCTAAAAGTATAATGTGTACTTACATTTTTATTTCCCTTCTCACACTCTCAATTCTTGGCACATTAATTATGTTGCTATTTTCCATATGCTTCAATTTTCACTCCATTCATTTCTATCCGAATCATTTCACAAATTGATATTGAAAGATCTTCCTCTTCTAATTGTGTTGAACTATAAAATATTATTTAAATTATTCGTTTATTTGCATTCTTCTTTCCATAATTAACTCAACTTTCATACGAGTACAATCTAACTTTAGTATAACATTTTTTACACATGTTACCTTTCTTTTTTCTTCCACCGTGTAAGAATAATGTCTTTTAA

mRNA sequence

ACAAGAGAAAGCAAGAAGCTGCGGTGGCGCGTGAAGGAGACAGACGGCGGCGTTTGCGATAATAAATTTCTCCTGTGGCCGTGAAATGGGTTCTAGAGAGCGAAAGAAAGCAGCAGCTAATTCTTCTCATCACAAGTCTAAAGAATTTCGTGCATCCACAAGCTCTAGTGCTGTGGTGAATGTGGAGAGTCTAGAGAGGGGTTTTCTAATAAATGTATTTTTGGAAAGAAATTCACCTGGATTGCTAGTTCGGATTCTAGAAGCGTTTGAGAAATTAGGACTTGAAGTCCTCGATGCTAACGTATCTTGTTCCGATTGTTTCCAACTCCAAGCTGTAGGAGAAGAGAATGAAGGGAGAAAAATCATAAAGGCCCAAGTGGTGAAAAATGCAGTAAAGCAAGCAATCAAGGAATGGAGTGAAAGTGATGGGCAGGCATGAATTATATATATAAATATAAATATTTATAATTACAATTATATTTATTTTCCTTCTTTTTTTTTTTCCTTTTTTCCCAAACAGAACATCACTTCTGTGTATAGGGTAACCAAAATTTTCAACTCTCTTTCAAGTGTAGGATTTAAAATATCTTCAACCAAAAAGGAAAAAAAAAAAAAAGTATTATTTCTTCTCAAAACCCTTAGAAGAAATTCATAAATTTGTTTTTTTTTTTCTTTCCATTTTGTTTGTTCTAAAAGTATAATGTGTACTTACATTTTTATTTCCCTTCTCACACTCTCAATTCTTGGCACATTAATTATGTTGCTATTTTCCATATGCTTCAATTTTCACTCCATTCATTTCTATCCGAATCATTTCACAAATTGATATTGAAAGATCTTCCTCTTCTAATTGTGTTGAACTATAAAATATTATTTAAATTATTCGTTTATTTGCATTCTTCTTTCCATAATTAACTCAACTTTCATACGAGTACAATCTAACTTTAGTATAACATTTTTTACACATGTTACCTTTCTTTTTTCTTCCACCGTGTAAGAATAATGTCTTTTAA

Coding sequence (CDS)

ATGGGTTCTAGAGAGCGAAAGAAAGCAGCAGCTAATTCTTCTCATCACAAGTCTAAAGAATTTCGTGCATCCACAAGCTCTAGTGCTGTGGTGAATGTGGAGAGTCTAGAGAGGGGTTTTCTAATAAATGTATTTTTGGAAAGAAATTCACCTGGATTGCTAGTTCGGATTCTAGAAGCGTTTGAGAAATTAGGACTTGAAGTCCTCGATGCTAACGTATCTTGTTCCGATTGTTTCCAACTCCAAGCTGTAGGAGAAGAGAATGAAGGGAGAAAAATCATAAAGGCCCAAGTGGTGAAAAATGCAGTAAAGCAAGCAATCAAGGAATGGAGTGAAAGTGATGGGCAGGCATGA

Protein sequence

MGSRERKKAAANSSHHKSKEFRASTSSSAVVNVESLERGFLINVFLERNSPGLLVRILEAFEKLGLEVLDANVSCSDCFQLQAVGEENEGRKIIKAQVVKNAVKQAIKEWSESDGQA
Homology
[Close]
BLAST of PI0020219 vs. ExPASy TrEMBL
Match: A0A1S3CLI8 (uncharacterized protein LOC103502184 OS=Cucumis melo OX=3656 GN=LOC103502184 PE=4 SV=1)

HSP 1 Score: 206.5 bits (524), Expect = 6.3e-50
Identity = 112/119 (94.12%), Postives = 115/119 (96.64%), Query Frame = 0 

Query: 1   MGSRERKK--AAANSSHHKSKEFRASTSSSAVVNVESLERGFLINVFLERNSPGLLVRIL 60
           MGSRERKK  AAANSSHH SKEFRASTSSSAVVNVES+ERGFLINVFLERNSPGLLVRIL
Sbjct: 1   MGSRERKKAAAAANSSHHNSKEFRASTSSSAVVNVESVERGFLINVFLERNSPGLLVRIL 60

Query: 61  EAFEKLGLEVLDANVSCSDCFQLQAVGEENEGRKIIKAQVVKNAVKQAIKEWSESDGQA 118
           EAFEKLGL VLDA++SCSDCFQLQAVGEENEGRKIIKAQVVKNAVKQAIKEWSESDGQA
Sbjct: 61  EAFEKLGLGVLDADISCSDCFQLQAVGEENEGRKIIKAQVVKNAVKQAIKEWSESDGQA 119

[Close]
BLAST of PI0020219 vs. ExPASy TrEMBL
Match: A0A6J1IM47 (uncharacterized protein LOC111477723 OS=Cucurbita maxima OX=3661 GN=LOC111477723 PE=4 SV=1)

HSP 1 Score: 201.8 bits (512), Expect = 1.5e-48
Identity = 110/118 (93.22%), Postives = 114/118 (96.61%), Query Frame = 0 

Query: 1   MGSRERKKAAANS-SHHKSKEFRASTSSSAVVNVESLERGFLINVFLERNSPGLLVRILE 60
           MGSRERKKAAA+S +HHKSKEFRASTSSSAVVNVE LERGFLINVF ERNSPGLLVRILE
Sbjct: 1   MGSRERKKAAASSLNHHKSKEFRASTSSSAVVNVEDLERGFLINVFSERNSPGLLVRILE 60

Query: 61  AFEKLGLEVLDANVSCSDCFQLQAVGEENEGRKIIKAQVVKNAVKQAIKEWSESDGQA 118
           AFEKLGLEVLDA+VSCSDCFQLQAVGEENEG KIIKAQVVKNAVKQAIKEWSES+GQA
Sbjct: 61  AFEKLGLEVLDADVSCSDCFQLQAVGEENEGTKIIKAQVVKNAVKQAIKEWSESNGQA 118

[Close]
BLAST of PI0020219 vs. ExPASy TrEMBL
Match: A0A0A0L039 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G329560 PE=4 SV=1)

HSP 1 Score: 201.4 bits (511), Expect = 2.0e-48
Identity = 109/119 (91.60%), Postives = 113/119 (94.96%), Query Frame = 0 

Query: 1   MGSRERKKAAA---NSSHHKSKEFRASTSSSAVVNVESLERGFLINVFLERNSPGLLVRI 60
           MGSRERKKAAA   NSSHH SKEFRASTSS+AVVNVES+ERGFLINVFLERNSPGLLVRI
Sbjct: 1   MGSRERKKAAAAAPNSSHHNSKEFRASTSSTAVVNVESVERGFLINVFLERNSPGLLVRI 60

Query: 61  LEAFEKLGLEVLDANVSCSDCFQLQAVGEENEGRKIIKAQVVKNAVKQAIKEWSESDGQ 117
           LEAFEKLGL VLDA++SCSDCFQLQA GEENEGRKIIKAQVVKNAVKQAIKEWSESDGQ
Sbjct: 61  LEAFEKLGLGVLDADISCSDCFQLQAFGEENEGRKIIKAQVVKNAVKQAIKEWSESDGQ 119

[Close]
BLAST of PI0020219 vs. ExPASy TrEMBL
Match: A0A6J1GFJ5 (uncharacterized protein LOC111453491 OS=Cucurbita moschata OX=3662 GN=LOC111453491 PE=4 SV=1)

HSP 1 Score: 200.7 bits (509), Expect = 3.4e-48
Identity = 109/118 (92.37%), Postives = 115/118 (97.46%), Query Frame = 0 

Query: 1   MGSRERKKAAANS-SHHKSKEFRASTSSSAVVNVESLERGFLINVFLERNSPGLLVRILE 60
           MGSRERKKAAA+S +HHKSKEFRASTSSSAVVNVE+LERGFLINVF ERNSPGLLV+ILE
Sbjct: 1   MGSRERKKAAASSLNHHKSKEFRASTSSSAVVNVENLERGFLINVFSERNSPGLLVQILE 60

Query: 61  AFEKLGLEVLDANVSCSDCFQLQAVGEENEGRKIIKAQVVKNAVKQAIKEWSESDGQA 118
           AFEKLGLEVLDA+VSCSDCFQLQAVGEENEG KIIKAQVVKNAVKQAIKEWSES+GQA
Sbjct: 61  AFEKLGLEVLDADVSCSDCFQLQAVGEENEGTKIIKAQVVKNAVKQAIKEWSESNGQA 118

[Close]
BLAST of PI0020219 vs. ExPASy TrEMBL
Match: A0A6J1CQF9 (uncharacterized protein LOC111013797 OS=Momordica charantia OX=3673 GN=LOC111013797 PE=4 SV=1)

HSP 1 Score: 186.8 bits (473), Expect = 5.1e-44
Identity = 103/119 (86.55%), Postives = 109/119 (91.60%), Query Frame = 0 

Query: 1   MGSRERKKAAANSSHHKSKEFRASTSSSAVVNVESLERGFLINVFLERNSPGLLVRILEA 60
           MGSRERKKAAA+S +HKSKEFRASTSSSA VNVES+ERGF+INV+LERNSPGLLVRILE 
Sbjct: 1   MGSRERKKAAASSQNHKSKEFRASTSSSAEVNVESVERGFVINVYLERNSPGLLVRILEV 60

Query: 61  FEKLGLEVLDANVSCSDCFQLQAVGEENEGRKIIKAQVVKNAVKQAIKEWSESD--GQA 118
           FEKLGLEVLDA VSCSD FQLQAVGEENEG KIIK QVVK AVKQAIKEWSES+  GQA
Sbjct: 61  FEKLGLEVLDATVSCSDSFQLQAVGEENEGTKIIKPQVVKKAVKQAIKEWSESESNGQA 119

[Close]
BLAST of PI0020219 vs. NCBI nr
Match: XP_038882922.1 (uncharacterized protein LOC120074022 [Benincasa hispida])

HSP 1 Score: 207.6 bits (527), Expect = 5.8e-50
Identity = 113/117 (96.58%), Postives = 115/117 (98.29%), Query Frame = 0 

Query: 1   MGSRERKKAAANSSHHKSKEFRASTSSSAVVNVESLERGFLINVFLERNSPGLLVRILEA 60
           MGSRERKKAAA SSHHKSKEFRASTSSSA+VNVESLERGFLINVFLERNSPGLLVRILEA
Sbjct: 1   MGSRERKKAAA-SSHHKSKEFRASTSSSAMVNVESLERGFLINVFLERNSPGLLVRILEA 60

Query: 61  FEKLGLEVLDANVSCSDCFQLQAVGEENEGRKIIKAQVVKNAVKQAIKEWSESDGQA 118
           FEKLGLEVLDANVSCSDCFQLQAVGEENEG KIIKAQVVKNAVKQAIKEWSES+GQA
Sbjct: 61  FEKLGLEVLDANVSCSDCFQLQAVGEENEGTKIIKAQVVKNAVKQAIKEWSESNGQA 116

[Close]
BLAST of PI0020219 vs. NCBI nr
Match: XP_008464258.1 (PREDICTED: uncharacterized protein LOC103502184 [Cucumis melo])

HSP 1 Score: 206.5 bits (524), Expect = 1.3e-49
Identity = 112/119 (94.12%), Postives = 115/119 (96.64%), Query Frame = 0 

Query: 1   MGSRERKK--AAANSSHHKSKEFRASTSSSAVVNVESLERGFLINVFLERNSPGLLVRIL 60
           MGSRERKK  AAANSSHH SKEFRASTSSSAVVNVES+ERGFLINVFLERNSPGLLVRIL
Sbjct: 1   MGSRERKKAAAAANSSHHNSKEFRASTSSSAVVNVESVERGFLINVFLERNSPGLLVRIL 60

Query: 61  EAFEKLGLEVLDANVSCSDCFQLQAVGEENEGRKIIKAQVVKNAVKQAIKEWSESDGQA 118
           EAFEKLGL VLDA++SCSDCFQLQAVGEENEGRKIIKAQVVKNAVKQAIKEWSESDGQA
Sbjct: 61  EAFEKLGLGVLDADISCSDCFQLQAVGEENEGRKIIKAQVVKNAVKQAIKEWSESDGQA 119

[Close]
BLAST of PI0020219 vs. NCBI nr
Match: XP_022977370.1 (uncharacterized protein LOC111477723 [Cucurbita maxima])

HSP 1 Score: 201.8 bits (512), Expect = 3.2e-48
Identity = 110/118 (93.22%), Postives = 114/118 (96.61%), Query Frame = 0 

Query: 1   MGSRERKKAAANS-SHHKSKEFRASTSSSAVVNVESLERGFLINVFLERNSPGLLVRILE 60
           MGSRERKKAAA+S +HHKSKEFRASTSSSAVVNVE LERGFLINVF ERNSPGLLVRILE
Sbjct: 1   MGSRERKKAAASSLNHHKSKEFRASTSSSAVVNVEDLERGFLINVFSERNSPGLLVRILE 60

Query: 61  AFEKLGLEVLDANVSCSDCFQLQAVGEENEGRKIIKAQVVKNAVKQAIKEWSESDGQA 118
           AFEKLGLEVLDA+VSCSDCFQLQAVGEENEG KIIKAQVVKNAVKQAIKEWSES+GQA
Sbjct: 61  AFEKLGLEVLDADVSCSDCFQLQAVGEENEGTKIIKAQVVKNAVKQAIKEWSESNGQA 118

[Close]
BLAST of PI0020219 vs. NCBI nr
Match: XP_004149926.1 (uncharacterized protein LOC101209807 [Cucumis sativus] >KGN54434.1 hypothetical protein Csa_012709 [Cucumis sativus])

HSP 1 Score: 201.4 bits (511), Expect = 4.2e-48
Identity = 109/119 (91.60%), Postives = 113/119 (94.96%), Query Frame = 0 

Query: 1   MGSRERKKAAA---NSSHHKSKEFRASTSSSAVVNVESLERGFLINVFLERNSPGLLVRI 60
           MGSRERKKAAA   NSSHH SKEFRASTSS+AVVNVES+ERGFLINVFLERNSPGLLVRI
Sbjct: 1   MGSRERKKAAAAAPNSSHHNSKEFRASTSSTAVVNVESVERGFLINVFLERNSPGLLVRI 60

Query: 61  LEAFEKLGLEVLDANVSCSDCFQLQAVGEENEGRKIIKAQVVKNAVKQAIKEWSESDGQ 117
           LEAFEKLGL VLDA++SCSDCFQLQA GEENEGRKIIKAQVVKNAVKQAIKEWSESDGQ
Sbjct: 61  LEAFEKLGLGVLDADISCSDCFQLQAFGEENEGRKIIKAQVVKNAVKQAIKEWSESDGQ 119

[Close]
BLAST of PI0020219 vs. NCBI nr
Match: XP_022950375.1 (uncharacterized protein LOC111453491 [Cucurbita moschata])

HSP 1 Score: 200.7 bits (509), Expect = 7.1e-48
Identity = 109/118 (92.37%), Postives = 115/118 (97.46%), Query Frame = 0 

Query: 1   MGSRERKKAAANS-SHHKSKEFRASTSSSAVVNVESLERGFLINVFLERNSPGLLVRILE 60
           MGSRERKKAAA+S +HHKSKEFRASTSSSAVVNVE+LERGFLINVF ERNSPGLLV+ILE
Sbjct: 1   MGSRERKKAAASSLNHHKSKEFRASTSSSAVVNVENLERGFLINVFSERNSPGLLVQILE 60

Query: 61  AFEKLGLEVLDANVSCSDCFQLQAVGEENEGRKIIKAQVVKNAVKQAIKEWSESDGQA 118
           AFEKLGLEVLDA+VSCSDCFQLQAVGEENEG KIIKAQVVKNAVKQAIKEWSES+GQA
Sbjct: 61  AFEKLGLEVLDADVSCSDCFQLQAVGEENEGTKIIKAQVVKNAVKQAIKEWSESNGQA 118

[Close]
BLAST of PI0020219 vs. TAIR 10
Match: AT2G40435.1 (BEST Arabidopsis thaliana protein match is: transcription regulators (TAIR:AT3G56220.1); Has 289 Blast hits to 289 proteins in 30 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 289; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 92.8 bits (229), Expect = 1.9e-19
Identity = 44/83 (53.01%), Postives = 60/83 (72.29%), Query Frame = 0 

Query: 30  VVNVESLERGFLINVFLERNSPGLLVRILEAFEKLGLEVLDANVSCSDCFQLQAVGEENE 89
           +V VE+L++GF+INVF  +N PG+LV +LEAFE +GL VL+A  SC+D F L A+G ENE
Sbjct: 70  MVTVETLDKGFMINVFSGKNQPGMLVSVLEAFEDIGLNVLEARASCTDSFSLHAMGLENE 129

Query: 90  GRKIIKAQVVKNAVKQAIKEWSE 113
             + + A+ VK AV  AI+ W E
Sbjct: 130 DGENMDAEAVKQAVTDAIRSWGE 152

[Close]
BLAST of PI0020219 vs. TAIR 10
Match: AT3G56220.1 (transcription regulators )

HSP 1 Score: 86.7 bits (213), Expect = 1.4e-17
Identity = 47/110 (42.73%), Postives = 71/110 (64.55%), Query Frame = 0 

Query: 5   ERKKAAANSSHHKSKEFRASTSSSAVVNVESLERGFLINVFLERNSPGLLVRILEAFEKL 64
           ++K    N++    + FR S+  + +V VE+LE+GF+I V   +N  G+LV +LE FE L
Sbjct: 45  KQKVEKINNATTSEQSFRESSDPNPMVTVETLEKGFMIKVMSRKNEAGMLVCVLETFEDL 104

Query: 65  GLEVLDANVSCSDCFQLQAVG-EENEGRKIIKAQVVKNAVKQAIKEWSES 114
           GL+V++A VSC+D F L A+G   N+    I A+ VK AV +AI+ WS+S
Sbjct: 105 GLDVVEARVSCTDTFSLHAIGSSNNDDGDCIDAEAVKQAVAEAIRTWSDS 154

The following BLAST results are available for this feature:
BLAST of PI0020219 vs.
Match NameE-valueIdentityDescription
BLAST of PI0020219 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A1S3CLI86.3e-5094.12uncharacterized protein LOC103502184 OS=Cucumis melo OX=3656 GN=LOC103502184 PE=... [more]
A0A6J1IM471.5e-4893.22uncharacterized protein LOC111477723 OS=Cucurbita maxima OX=3661 GN=LOC111477723... [more]
A0A0A0L0392.0e-4891.60Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G329560 PE=4 SV=1[more]
A0A6J1GFJ53.4e-4892.37uncharacterized protein LOC111453491 OS=Cucurbita moschata OX=3662 GN=LOC1114534... [more]
A0A6J1CQF95.1e-4486.55uncharacterized protein LOC111013797 OS=Momordica charantia OX=3673 GN=LOC111013... [more]
BLAST of PI0020219 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_038882922.15.8e-5096.58uncharacterized protein LOC120074022 [Benincasa hispida][more]
XP_008464258.11.3e-4994.12PREDICTED: uncharacterized protein LOC103502184 [Cucumis melo][more]
XP_022977370.13.2e-4893.22uncharacterized protein LOC111477723 [Cucurbita maxima][more]
XP_004149926.14.2e-4891.60uncharacterized protein LOC101209807 [Cucumis sativus] >KGN54434.1 hypothetical ... [more]
XP_022950375.17.1e-4892.37uncharacterized protein LOC111453491 [Cucurbita moschata][more]
BLAST of PI0020219 vs. TAIR 10
Match NameE-valueIdentityDescription
AT2G40435.11.9e-1953.01BEST Arabidopsis thaliana protein match is: transcription regulators (TAIR:AT3G5... [more]
AT3G56220.11.4e-1742.73transcription regulators [more]
InterPro
Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..29
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..22
NoneNo IPR availablePANTHERPTHR31945:SF45TRANSCRIPTION FACTOR BHLH FAMILY-RELATEDcoord: 29..113
NoneNo IPR availablePANTHERPTHR31945TRANSCRIPTION FACTOR SCREAM2-RELATEDcoord: 29..113

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
PI0020219.1PI0020219.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
cellular_component GO:0005634 nucleus
molecular_function GO:0003700 DNA-binding transcription factor activity
molecular_function GO:0043565 sequence-specific DNA binding