PI0020153 (gene) Melon (PI 482460) v1

Overview


Name	PI0020153
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	Ribonuclease T(2)
Location	chr08: 21957373 .. 21958160 (-)
RNA-Seq Expression	PI0020153
Synteny	PI0020153

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACTCAACATCTTTTCATTTTCTATCTTTTAAGTTTGTTGTTGGTTGTGAATGGTGATCCATTCGACTTCTTCCAACTAGTTGAACAATGGGGTCCAAACACATGTAATGACACTCTTGGCACCCGGTGTCATGCTCAACCTCAACCCATGTTCACTATTCATGGACTATGGCCGAGTAATTTTCAAATGTCCATCTTTCTTGTGTAGTTCATATGAAATTTAAACCTACACAGGTTCCCATCTTCTTCGATTATTTTTTTGTGTGTGTTTTTTCTATCATTAGCATTTTAATCATTGTTTCAACATTCTTTTATTTTATTTTAGGTTACTGCAATTGAACAAGATCTAAATATATATTGGCCAAATGTAATATGGGGGAAAAACAAGCTATTTTGGGGATATGAATGGAGAAAGCACGGGGCATGTACAAACCCTCCTTATACCGTACTTCAGTATTTTCAAATTGCTTTGAATCTCCGAAGAATAAAAATTATGATCTGTTGGCAATTTTAAATGATGCTGGGCTCAGCCCCCAAATGCCCAAAGATCTCGTATCTCAAGACATCCTAAACCCCATTAAAAATGCAACAGGAAAGAATCCAGGCATCCATTGCAACAACAATGGTATAACTGGGAAGTTGCAATTGTATGAAATTGTACTGTGTTTTGACAAGAATCCAGTTACCCTCATTGACTGCCCTCGGTTTGTTAGCAACAGTTGTCCATCTACATTCGTGTGGCTCCTCCCACAACAGAGTTCAGTTGGTGTTCCAGATTTTCCATGA

mRNA sequence

ATGACTCAACATCTTTTCATTTTCTATCTTTTAAGTTTGTTGTTGGTTGTGAATGGTGATCCATTCGACTTCTTCCAACTAGTTGAACAATGGGATCTAAATATATATTGGCCAAATGTAATATGGGGGAAAAACAAGCTATTTTGGGGATATGAATGGAGAAAGCACGGGGCATGTACAAACCCTCCTTATACCAATAAAAATTATGATCTGTTGGCAATTTTAAATGATGCTGGGCTCAGCCCCCAAATGCCCAAAGATCTCGTATCTCAAGACATCCTAAACCCCATTAAAAATGCAACAGGAAAGAATCCAGGCATCCATTGCAACAACAATGGTATAACTGGGAAGTTGCAATTGTATGAAATTGTACTGTGTTTTGACAAGAATCCAGTTACCCTCATTGACTGCCCTCGGTTTGTTAGCAACAGTTGTCCATCTACATTCGTGTGGCTCCTCCCACAACAGAGTTCAGTTGGTGTTCCAGATTTTCCATGA

Coding sequence (CDS)

ATGACTCAACATCTTTTCATTTTCTATCTTTTAAGTTTGTTGTTGGTTGTGAATGGTGATCCATTCGACTTCTTCCAACTAGTTGAACAATGGGATCTAAATATATATTGGCCAAATGTAATATGGGGGAAAAACAAGCTATTTTGGGGATATGAATGGAGAAAGCACGGGGCATGTACAAACCCTCCTTATACCAATAAAAATTATGATCTGTTGGCAATTTTAAATGATGCTGGGCTCAGCCCCCAAATGCCCAAAGATCTCGTATCTCAAGACATCCTAAACCCCATTAAAAATGCAACAGGAAAGAATCCAGGCATCCATTGCAACAACAATGGTATAACTGGGAAGTTGCAATTGTATGAAATTGTACTGTGTTTTGACAAGAATCCAGTTACCCTCATTGACTGCCCTCGGTTTGTTAGCAACAGTTGTCCATCTACATTCGTGTGGCTCCTCCCACAACAGAGTTCAGTTGGTGTTCCAGATTTTCCATGA

Protein sequence

MTQHLFIFYLLSLLLVVNGDPFDFFQLVEQWDLNIYWPNVIWGKNKLFWGYEWRKHGACTNPPYTNKNYDLLAILNDAGLSPQMPKDLVSQDILNPIKNATGKNPGIHCNNNGITGKLQLYEIVLCFDKNPVTLIDCPRFVSNSCPSTFVWLLPQQSSVGVPDFP

Homology

[Close]

BLAST of PI0020153 vs. ExPASy Swiss-Prot
Match: P23540 (Ribonuclease MC OS=Momordica charantia OX=3673 PE=1 SV=1)

HSP 1 Score: 82.4 bits (202), Expect = 5.2e-15
Identity = 48/152 (31.58%), Postives = 70/152 (46.05%), Query Frame = 0


Query: 12  SLLLVVNGDPFDFFQLVE-QWDLNIYWPNVIWGKNKLFWGYEWRKHGACTNPPYT----- 71
           SL     G PFD  ++   Q  LN  WPNV+   N+ FW +EW KHG C+   +      
Sbjct: 44  SLTNCPQGSPFDITKISHLQSQLNTLWPNVLRANNQQFWSHEWTKHGTCSESTFNQAAYF 103

Query: 72  ------NKNYDLLAILNDAGLSPQMPKDLVSQDILNPIKNATGKNPGIHCNNNGITGKLQ 131
                   NYD++  L      P   +    Q I   +K   GK PG+ C  +  T    
Sbjct: 104 KLAVDMRNNYDIIGALRPHAAGPN-GRTKSRQAIKGFLKAKFGKFPGLRCRTDPQTKVSY 163

Query: 132 LYEIVLCFDKNPVTLIDCPRFVSNSCPSTFVW 152
           L ++V CF ++  TLIDC R   ++C + F++
Sbjct: 164 LVQVVACFAQDGSTLIDCTR---DTCGANFIF 191

[Close]

BLAST of PI0020153 vs. ExPASy Swiss-Prot
Match: P80022 (Extracellular ribonuclease LE OS=Solanum lycopersicum OX=4081 PE=1 SV=2)

HSP 1 Score: 75.9 bits (185), Expect = 4.9e-13
Identity = 45/124 (36.29%), Postives = 61/124 (49.19%), Query Frame = 0


Query: 37  WPNVIW--GKNKLFWGYEWRKHGACTNPPYTNKN------------YDLLAILNDAGLSP 96
           WP +    G    FW +EW KHG C     TN++             DLL+IL  A + P
Sbjct: 101 WPTLACPSGSGSTFWSHEWEKHGTCAESVLTNQHAYFKKALDLKNQIDLLSILQGADIHP 160

Query: 97  QMPK-DLVSQDILNPIKNATGKNPGIHCNNNGITGKLQLYEIVLCFDKNPVTLIDCPRFV 146
                DLV  +I N IK+A G  P I CN +  +G  QLY++ +C D +  +LI+CP F 
Sbjct: 161 DGESYDLV--NIRNAIKSAIGYTPWIQCNVDQ-SGNSQLYQVYICVDGSGSSLIECPIFP 220

[Close]

BLAST of PI0020153 vs. ExPASy Swiss-Prot
Match: P93460 (Ribonuclease S-5 OS=Pyrus pyrifolia OX=3767 PE=1 SV=1)

HSP 1 Score: 73.2 bits (178), Expect = 3.2e-12
Identity = 48/122 (39.34%), Postives = 59/122 (48.36%), Query Frame = 0


Query: 33  LNIYWPNVI-WGKNKLFWGYEWRKHGACTNPPYTNKNY--------------DLLAILND 92
           L I WPNV    KNKLFW  EW KHG C  P   N+N+              ++  IL+ 
Sbjct: 91  LAIIWPNVFDRTKNKLFWDKEWMKHGTCGYPTIDNENHYFETVIKMYISKKQNVSRILSK 150

Query: 93  AGLSPQMPKDLVSQDILNPIKN-ATGKNPGIHCNNNGITGKLQLYEIVLCFDKNPVTLID 139
           A + P   K  +  DI N I+N A  K P + C   G T   +L EI LC DK+    ID
Sbjct: 151 AKIEPDGKKRAL-LDIENAIRNGADNKKPKLKCQKKGTT--TELVEITLCSDKSGEHFID 209

[Close]

BLAST of PI0020153 vs. ExPASy Swiss-Prot
Match: O80323 (Ribonuclease S-3 OS=Pyrus pyrifolia OX=3767 PE=1 SV=1)

HSP 1 Score: 72.4 bits (176), Expect = 5.4e-12
Identity = 47/122 (38.52%), Postives = 59/122 (48.36%), Query Frame = 0


Query: 33  LNIYWPNVI-WGKNKLFWGYEWRKHGACTNPPYTNKNY--------------DLLAILND 92
           L I WPNV    KN LFW  EW KHG+C  P   N+N+              ++  IL+ 
Sbjct: 86  LEIIWPNVFDRTKNNLFWDKEWMKHGSCGYPTIDNENHYFETVIKMYISKKQNVSRILSK 145

Query: 93  AGLSPQMPKDLVSQDILNPIKN-ATGKNPGIHCNNNGITGKLQLYEIVLCFDKNPVTLID 139
           A + P   K  +  DI N I+N A  K P + C   G T   +L EI LC DK+    ID
Sbjct: 146 AKIEPDGKKRAL-LDIENAIRNGADNKKPKLKCQKKGTT--TELVEITLCSDKSGEHFID 204

[Close]

BLAST of PI0020153 vs. ExPASy Swiss-Prot
Match: Q38717 (Ribonuclease S-4 OS=Antirrhinum hispanicum OX=49039 GN=S4 PE=2 SV=1)

HSP 1 Score: 69.3 bits (168), Expect = 4.6e-11
Identity = 37/118 (31.36%), Postives = 57/118 (48.31%), Query Frame = 0


Query: 37  WPNV----IWGKNKLFWGYEWRKHGACTNPPYTNKNY-----------DLLAILNDAGLS 96
           WP++    I G +  FW  +WRKHG+C  PP+ ++ Y           D+L IL +   +
Sbjct: 102 WPDLKQQSIAGLSYNFWQDQWRKHGSCCFPPHESEIYFLKALELKDRLDVLTILENNNFN 161

Query: 97  PQMPKDLVSQDILNPIKNATGKNPGIHCNNNGITGKLQLYEIVLCFDKNPVTLIDCPR 140
           P  P+      + N I  A GK P + C       +  L E+V+C D N  +++ CPR
Sbjct: 162 PGTPQPFSVLRVFNTISRAIGKTPILKC------AQSYLKEVVICVDNNGASVVHCPR 213

[Close]

BLAST of PI0020153 vs. ExPASy TrEMBL
Match: A0A0A0LAB0 (Ribonuclease T(2) OS=Cucumis sativus OX=3659 GN=Csa_3G736680 PE=3 SV=1)

HSP 1 Score: 213.4 bits (542), Expect = 7.2e-52
Identity = 119/234 (50.85%), Postives = 132/234 (56.41%), Query Frame = 0


Query: 1   MTQHLFIFYLLSLLLVVNGDPFDFFQLVEQW----------------------------- 60
           M QH+FI  LLS LL VNG PFDFFQLV+QW                             
Sbjct: 1   MAQHIFILCLLSSLLFVNGIPFDFFQLVQQWGPNICSPAGSKCYAQPQPMFTIHGLWPSN 60

Query: 61  -------------------------DLNIYWPNVIWGKNKLFWGYEWRKHGACTNPPYT- 120
                                     LN YWP+VI GKN  FW +EWRKH  C +PP+T 
Sbjct: 61  FSTVPILCPRTKKLFPQGKVTSLEQHLNKYWPDVISGKNSNFWEHEWRKHADCIDPPFTI 120

Query: 121 ------------NKNYDLLAILNDAGLSPQMPKDLVSQDILNPIKNATGKNPGIHCNNNG 166
                       NK YDLL ILNDAGLS Q  KDL+SQ++L+PIKNATG  PGI CN NG
Sbjct: 121 FWYFDISLRHRMNKTYDLLTILNDAGLSHQTHKDLISQNVLDPIKNATGMEPGIRCNING 180

[Close]

BLAST of PI0020153 vs. ExPASy TrEMBL
Match: A0A5D3DP91 (Ribonuclease T(2) OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G002140 PE=3 SV=1)

HSP 1 Score: 191.8 bits (486), Expect = 2.2e-45
Identity = 112/230 (48.70%), Postives = 126/230 (54.78%), Query Frame = 0


Query: 1   MTQHLFIFYLLSLLLVVNGDPFDFFQLVEQW----------------------------- 60
           M QH FI  LLSLLL VNG PFDFFQLVEQW                             
Sbjct: 1   MAQHTFILCLLSLLLFVNGYPFDFFQLVEQWGPNTCNDGTQCHAQPQPEFTIHGLWPSNF 60

Query: 61  -----------------------DLNIYWPNVIWGKNKLFWGYEWRKHGACTNPPYT--- 120
                                  DL+ YWP+VI G N+ FW  EW+KHGAC +PP+    
Sbjct: 61  SNARLFCATRKLFDNGQISLLEGDLDRYWPDVINGNNRGFWSNEWKKHGACIDPPFNITQ 120

Query: 121 --------NKNYDLLAILNDA-GLSPQMPKD-LVSQDILNPIKNATGKNPGIHCNNNGIT 165
                   ++ YDLL ILN     + QMP + L  +DILNPI NAT K  GI CN NGIT
Sbjct: 121 YFQLSLDHHRTYDLLKILNGVWHRNRQMPNNGLAPKDILNPIFNATNKTAGIRCNKNGIT 180

[Close]

BLAST of PI0020153 vs. ExPASy TrEMBL
Match: A0A0A0LAN6 (Ribonuclease T(2) OS=Cucumis sativus OX=3659 GN=Csa_3G745530 PE=3 SV=1)

HSP 1 Score: 152.1 bits (383), Expect = 2.0e-33
Identity = 85/216 (39.35%), Postives = 109/216 (50.46%), Query Frame = 0


Query: 1   MTQHLFIFYLLSLLLVVNGD-PFDFFQLVEQW---------------------------- 60
           MTQ + I Y LSL++ VNG  PF+FFQ VEQW                            
Sbjct: 1   MTQSILIIYFLSLVVFVNGGVPFEFFQFVEQWGPNVCNTGARVSPCHTPPQAKFTIHGLW 60

Query: 61  -------------------------DLNIYWPNVIWGKNKLFWGYEWRKHGACTNPPYT- 120
                                     LNI WP++ +G N  FWG+EW  HG C++PP++ 
Sbjct: 61  PSNHSNAHLLCQSKTIYSKVISLEGQLNISWPDLKYGNNDKFWGHEWDTHGKCSDPPFSL 120

Query: 121 ----------NKNYDLLAILNDAGLSPQMPKDLVSQDILNPIKNATGKNPGIHCNNNGIT 152
                      + +DLL IL  AGL+PQ  ++L  Q+I+ PI+  T K PGI CN N  T
Sbjct: 121 FQYFQISLNLLRKFDLLTILKAAGLNPQTSQNLAIQNIMAPIQRTTKKYPGIRCNKNVKT 180

[Close]

BLAST of PI0020153 vs. ExPASy TrEMBL
Match: A0A6J1IAR7 (Ribonuclease T(2) OS=Cucurbita maxima OX=3661 GN=LOC111472844 PE=3 SV=1)

HSP 1 Score: 149.4 bits (376), Expect = 1.3e-32
Identity = 76/158 (48.10%), Postives = 94/158 (59.49%), Query Frame = 0


Query: 16  VVNGDPFDFFQLVE-QWDLNIYWPNVIWGKNKLFWGYEWRKHGACTNPPY---------- 75
           V  G PFD  Q+   +  LN YWP+VI G N+ FW +EW  HG C++PP+          
Sbjct: 68  VCAGQPFDRAQIATLEPQLNTYWPDVINGNNQRFWKHEWDNHGTCSDPPFNQLQYFQTTL 127

Query: 76  ---TNKNYDLLAILNDAGLSPQMPKDLVSQDILNPIKNATGKNPGIHCNNNGITGKLQLY 135
              TN NYDLLAILN AGL P        Q I   I+ ATGK PG+ CN N  + + QL+
Sbjct: 128 NIRTNHNYDLLAILNTAGLGPTATTTRQYQAIEGAIQAATGKKPGLRCNKNAQSKRKQLF 187

Query: 136 EIVLCFDKNPVTLIDCPRFVSNSCPSTFVWLLPQQSSV 160
           EI+LCFDKN VTLI+C +F   +CPS FVWL  Q  S+
Sbjct: 188 EIILCFDKNGVTLINCTQFAGITCPSQFVWLDRQPLSL 225

[Close]

BLAST of PI0020153 vs. ExPASy TrEMBL
Match: A0A6J1EXD5 (Ribonuclease T(2) OS=Cucurbita moschata OX=3662 GN=LOC111439251 PE=3 SV=1)

HSP 1 Score: 148.3 bits (373), Expect = 2.9e-32
Identity = 78/154 (50.65%), Postives = 92/154 (59.74%), Query Frame = 0


Query: 15  LVVNGDPFDFFQ---LVEQWDLNIYWPNVIWGKNKLFWGYEWRKHGACTNPPY------- 74
           LV  G PF+  Q   LV Q  LN YWP+VI G N+ FW +EW  HG C++PP+       
Sbjct: 66  LVCAGQPFNPAQIATLVPQ--LNTYWPDVISGNNQRFWKHEWDSHGTCSDPPFNQLQYFQ 125

Query: 75  ------TNKNYDLLAILNDAGLSPQMPKDLVSQDILNPIKNATGKNPGIHCNNNGITGKL 134
                 TN NYDLLAILN AGL P          I   I+ ATGK PG+ CN N  + K 
Sbjct: 126 TTLNIRTNHNYDLLAILNTAGLGPTATNTRQYGAIEGAIQAATGKKPGLRCNKNAQSKKK 185

Query: 135 QLYEIVLCFDKNPVTLIDCPRFVSNSCPSTFVWL 153
           QL+EI+LCFDKN VTLIDC +F   +CPS FVWL
Sbjct: 186 QLFEIILCFDKNGVTLIDCTQFAGITCPSQFVWL 217

[Close]

BLAST of PI0020153 vs. NCBI nr
Match: XP_011651927.1 (ribonuclease MC [Cucumis sativus] >KGN58920.1 hypothetical protein Csa_001884 [Cucumis sativus])

HSP 1 Score: 213.4 bits (542), Expect = 1.5e-51
Identity = 119/234 (50.85%), Postives = 132/234 (56.41%), Query Frame = 0


Query: 1   MTQHLFIFYLLSLLLVVNGDPFDFFQLVEQW----------------------------- 60
           M QH+FI  LLS LL VNG PFDFFQLV+QW                             
Sbjct: 1   MAQHIFILCLLSSLLFVNGIPFDFFQLVQQWGPNICSPAGSKCYAQPQPMFTIHGLWPSN 60

Query: 61  -------------------------DLNIYWPNVIWGKNKLFWGYEWRKHGACTNPPYT- 120
                                     LN YWP+VI GKN  FW +EWRKH  C +PP+T 
Sbjct: 61  FSTVPILCPRTKKLFPQGKVTSLEQHLNKYWPDVISGKNSNFWEHEWRKHADCIDPPFTI 120

Query: 121 ------------NKNYDLLAILNDAGLSPQMPKDLVSQDILNPIKNATGKNPGIHCNNNG 166
                       NK YDLL ILNDAGLS Q  KDL+SQ++L+PIKNATG  PGI CN NG
Sbjct: 121 FWYFDISLRHRMNKTYDLLTILNDAGLSHQTHKDLISQNVLDPIKNATGMEPGIRCNING 180

[Close]

BLAST of PI0020153 vs. NCBI nr
Match: TYK25090.1 (S-RNase [Cucumis melo var. makuwa])

HSP 1 Score: 191.8 bits (486), Expect = 4.6e-45
Identity = 112/230 (48.70%), Postives = 126/230 (54.78%), Query Frame = 0


Query: 1   MTQHLFIFYLLSLLLVVNGDPFDFFQLVEQW----------------------------- 60
           M QH FI  LLSLLL VNG PFDFFQLVEQW                             
Sbjct: 1   MAQHTFILCLLSLLLFVNGYPFDFFQLVEQWGPNTCNDGTQCHAQPQPEFTIHGLWPSNF 60

Query: 61  -----------------------DLNIYWPNVIWGKNKLFWGYEWRKHGACTNPPYT--- 120
                                  DL+ YWP+VI G N+ FW  EW+KHGAC +PP+    
Sbjct: 61  SNARLFCATRKLFDNGQISLLEGDLDRYWPDVINGNNRGFWSNEWKKHGACIDPPFNITQ 120

Query: 121 --------NKNYDLLAILNDA-GLSPQMPKD-LVSQDILNPIKNATGKNPGIHCNNNGIT 165
                   ++ YDLL ILN     + QMP + L  +DILNPI NAT K  GI CN NGIT
Sbjct: 121 YFQLSLDHHRTYDLLKILNGVWHRNRQMPNNGLAPKDILNPIFNATNKTAGIRCNKNGIT 180

[Close]

BLAST of PI0020153 vs. NCBI nr
Match: XP_038906187.1 (ribonuclease MC-like [Benincasa hispida])

HSP 1 Score: 153.7 bits (387), Expect = 1.4e-33
Identity = 81/161 (50.31%), Postives = 95/161 (59.01%), Query Frame = 0


Query: 15  LVVNGDPFDFFQLVE-QWDLNIYWPNVIWGKNKLFWGYEWRKHGACTNPPYT-------- 74
           LV  G PFD  Q+   +  LN YWP+VI G N+ FW +EW  HG C++PP+         
Sbjct: 68  LVCTGLPFDPTQIAAIRPQLNTYWPDVIRGNNQRFWQHEWDAHGTCSDPPFNQRQYFQTT 127

Query: 75  -----NKNYDLLAILNDAGLSPQMPKDLVSQDILNPIKNATGKNPGIHCNNNGITGKLQL 134
                N NYDLLAILN AGL P        Q I N I+ ATGK PG+ CN N  TG  QL
Sbjct: 128 LNIRMNHNYDLLAILNAAGLGPTATMVRQYQAIENAIQAATGKIPGLRCNTNAQTGSRQL 187

Query: 135 YEIVLCFDKNPVTLIDCPRFVSNSCPSTFVWLLPQQSSVGV 162
           +EI+LCFDKN VTLIDC  F   +CP  FVWL  Q  S+GV
Sbjct: 188 FEIILCFDKNGVTLIDCTPFAGITCPLQFVWLHRQPWSLGV 228

[Close]

BLAST of PI0020153 vs. NCBI nr
Match: KAE8651058.1 (hypothetical protein Csa_002465 [Cucumis sativus])

HSP 1 Score: 152.1 bits (383), Expect = 4.1e-33
Identity = 85/216 (39.35%), Postives = 109/216 (50.46%), Query Frame = 0


Query: 1   MTQHLFIFYLLSLLLVVNGD-PFDFFQLVEQW---------------------------- 60
           MTQ + I Y LSL++ VNG  PF+FFQ VEQW                            
Sbjct: 1   MTQSILIIYFLSLVVFVNGGVPFEFFQFVEQWGPNVCNTGARVSPCHTPPQAKFTIHGLW 60

Query: 61  -------------------------DLNIYWPNVIWGKNKLFWGYEWRKHGACTNPPYT- 120
                                     LNI WP++ +G N  FWG+EW  HG C++PP++ 
Sbjct: 61  PSNHSNAHLLCQSKTIYSKVISLEGQLNISWPDLKYGNNDKFWGHEWDTHGKCSDPPFSL 120

Query: 121 ----------NKNYDLLAILNDAGLSPQMPKDLVSQDILNPIKNATGKNPGIHCNNNGIT 152
                      + +DLL IL  AGL+PQ  ++L  Q+I+ PI+  T K PGI CN N  T
Sbjct: 121 FQYFQISLNLLRKFDLLTILKAAGLNPQTSQNLAIQNIMAPIQRTTKKYPGIRCNKNVKT 180

[Close]

BLAST of PI0020153 vs. NCBI nr
Match: XP_031738690.1 (ribonuclease MC-like [Cucumis sativus])

HSP 1 Score: 152.1 bits (383), Expect = 4.1e-33
Identity = 85/216 (39.35%), Postives = 109/216 (50.46%), Query Frame = 0


Query: 1   MTQHLFIFYLLSLLLVVNGD-PFDFFQLVEQW---------------------------- 60
           MTQ + I Y LSL++ VNG  PF+FFQ VEQW                            
Sbjct: 1   MTQSILIIYFLSLVVFVNGGVPFEFFQFVEQWGPNVCNTGARVSPCHTPPQAKFTIHGLW 60

Query: 61  -------------------------DLNIYWPNVIWGKNKLFWGYEWRKHGACTNPPYT- 120
                                     LNI WP++ +G N  FWG+EW  HG C++PP++ 
Sbjct: 61  PSNHSNAHLLCQSKTIYSKVISLEGQLNISWPDLKYGNNDKFWGHEWDTHGKCSDPPFSL 120

Query: 121 ----------NKNYDLLAILNDAGLSPQMPKDLVSQDILNPIKNATGKNPGIHCNNNGIT 152
                      + +DLL IL  AGL+PQ  ++L  Q+I+ PI+  T K PGI CN N  T
Sbjct: 121 FQYFQISLNLLRKFDLLTILKAAGLNPQTSQNLAIQNIMAPIQRTTKKYPGIRCNKNVKT 180

[Close]

BLAST of PI0020153 vs. TAIR 10
Match: AT2G39780.1 (ribonuclease 2 )

HSP 1 Score: 47.0 bits (110), Expect = 1.7e-05
Identity = 38/140 (27.14%), Postives = 56/140 (40.00%), Query Frame = 0


Query: 33  LNIYWPNVIWGK-------NKLFWGYEWRKHGACTNPPYTNK-NYDLLA----------- 92
           L  YWP++  G           FWG+EW KHG C++P + ++ NY L             
Sbjct: 103 LEKYWPSLSCGSPSSCNGGKGSFWGHEWEKHGTCSSPVFHDEYNYFLTTLNLYLKHNVTD 162

Query: 93  ILNDAGLSPQMPKDLVSQDILNPIKNATGKNPGIHCNNNGITGKLQLYEIVLCF--DKNP 143
           +L  AG      +      I+  I+NA    P + C  + I       EI +CF  D  P
Sbjct: 163 VLYQAGYVASNSEKYPLGGIVTAIQNAFHITPEVVCKRDAID------EIRICFYKDFKP 222

The following BLAST results are available for this feature:

BLAST of PI0020153 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P23540	5.2e-15	31.58	Ribonuclease MC OS=Momordica charantia OX=3673 PE=1 SV=1	[more]
P80022	4.9e-13	36.29	Extracellular ribonuclease LE OS=Solanum lycopersicum OX=4081 PE=1 SV=2	[more]
P93460	3.2e-12	39.34	Ribonuclease S-5 OS=Pyrus pyrifolia OX=3767 PE=1 SV=1	[more]
O80323	5.4e-12	38.52	Ribonuclease S-3 OS=Pyrus pyrifolia OX=3767 PE=1 SV=1	[more]
Q38717	4.6e-11	31.36	Ribonuclease S-4 OS=Antirrhinum hispanicum OX=49039 GN=S4 PE=2 SV=1	[more]

BLAST of PI0020153 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LAB0	7.2e-52	50.85	Ribonuclease T(2) OS=Cucumis sativus OX=3659 GN=Csa_3G736680 PE=3 SV=1	[more]
A0A5D3DP91	2.2e-45	48.70	Ribonuclease T(2) OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G00...	[more]
A0A0A0LAN6	2.0e-33	39.35	Ribonuclease T(2) OS=Cucumis sativus OX=3659 GN=Csa_3G745530 PE=3 SV=1	[more]
A0A6J1IAR7	1.3e-32	48.10	Ribonuclease T(2) OS=Cucurbita maxima OX=3661 GN=LOC111472844 PE=3 SV=1	[more]
A0A6J1EXD5	2.9e-32	50.65	Ribonuclease T(2) OS=Cucurbita moschata OX=3662 GN=LOC111439251 PE=3 SV=1	[more]

BLAST of PI0020153 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011651927.1	1.5e-51	50.85	ribonuclease MC [Cucumis sativus] >KGN58920.1 hypothetical protein Csa_001884 [C...	[more]
TYK25090.1	4.6e-45	48.70	S-RNase [Cucumis melo var. makuwa]	[more]
XP_038906187.1	1.4e-33	50.31	ribonuclease MC-like [Benincasa hispida]	[more]
KAE8651058.1	4.1e-33	39.35	hypothetical protein Csa_002465 [Cucumis sativus]	[more]
XP_031738690.1	4.1e-33	39.35	ribonuclease MC-like [Cucumis sativus]	[more]

BLAST of PI0020153 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G39780.1	1.7e-05	27.14	ribonuclease 2	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25

Position :

Zoom :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001568	Ribonuclease T2-like	PFAM	PF00445	Ribonuclease_T2	coord: 32..137 e-value: 6.7E-16 score: 59.0
IPR001568	Ribonuclease T2-like	PANTHER	PTHR11240	RIBONUCLEASE T2	coord: 32..148
IPR036430	Ribonuclease T2-like superfamily	GENE3D	3.90.730.10		coord: 30..160 e-value: 1.5E-22 score: 82.4
IPR036430	Ribonuclease T2-like superfamily	SUPERFAMILY	55895	Ribonuclease Rh-like	coord: 22..150
None	No IPR available	PANTHER	PTHR11240:SF46	INTRACELLULAR RIBONUCLEASE LX-LIKE	coord: 32..148
IPR033130	Ribonuclease T2, His active site 2	PROSITE	PS00531	RNASE_T2_2	coord: 48..59

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0020153.1	PI0020153.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0090305	nucleic acid phosphodiester bond hydrolysis
biological_process	GO:0016070	RNA metabolic process
cellular_component	GO:0110165	cellular anatomical entity
molecular_function	GO:0033897	ribonuclease T2 activity
molecular_function	GO:0003723	RNA binding