PI0020125 (gene) Melon (PI 482460) v1

Overview
NamePI0020125
Typegene
OrganismCucumis metuliferus (Melon (PI 482460) v1)
DescriptionUnknown protein
Locationchr01: 28666894 .. 28668475 (+)
RNA-Seq ExpressionPI0020125
SyntenyPI0020125
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCGTGATAAGACGACGCGGTTTTTGGTTGTTATAAGATGTTTTTTGTTTTTGTTTTGTTTTATTTTAAAATGTTGATATTTTATTGTCACTGTCAACATTAAAATAGTAATGGCAAATTTATATGCACAAAATGGGCGCATTAGCTGTCAGTTTTTGGACTAAAATCAAATCACTGTGCTAAGCTTTGGTTGTAAGTTTGACCCTTTAAAATTGACCATTTAAATTTTAAACTCATTTGTAGTTAAGCAAGTTGATTTAGAAGCTTTGTTATTGGGACACCTAATCTTCACTTTAAAGTATTTTATTGTAGCTGTTTGAAGTTCAAGCATGGATTATAGACCTCTTATAGCTTTTAGTATGTTTGGACATTCAATTCATCATCGCAGTATTTAGGTTATAATATAGTTTGTTTTTGGAAACAAAATATGTTAGCACAAGCAATAAATAATAAATAATGTAACAATTCATCATCACAGTATTTAGATTATAATATAGTTTGTTTTTTGAAACAAAATATGTTAGCACGAGCAATAAATAATAAATAATGTAACAAAAAGAGAAAGAGATAATTAGTAGAAAATAGTAGACATTGGAATTTCATTTGGAAATCAAGTATAGTAACTATATAGCGATGACCTAAATGATGTAGTGATCCAAATTCTCGTGGTAGGTCATTGTCACTAGTCACTAGAGAGATCATGATATATCGGAAAATCAACTTGATTGACCGAACGAAAGTCGATTAGTCGAAGAATAAGAGGGGTCGGTCGGAATTAGTTTGAGAAAATTTCAAACAAATTTTTTTTAAAAATAATCTAAAGAATTAAACCGACATATCAACTTTTACTCCTTGATGATGAAGGTTGGTTCAAACATCAATTAAATCGACCATAGTCAGTTTGGTCGAACAATCGACTCCGACCGATCGATCATCATCTCTAATTGTCACACAAATTCACAAAACTTTCGAGACATTTAGTAAAATTCAAAGGTAATATTGTAATTTATGAAAATAAAAAGATATTTTTGAAGCAAATGACAAAACTCGGGTTGTTTTTTTTTTGTAATTTTACCAAAATTTATTTTATGGTTGGCTAAAACCCTCAAGAAACCCCTCACACACACAAAGGTAGTAAATTACAAATTTTCACCAAAATGGGCTAAATTCGCAATTAAACAATAAAAGAAAAAGAAGAAAAAAAAAGCCCCTAAACCCTTCGTTTCCCCCCCGCTCACTTTCTCTCTCTTCTCCTCCTTCTCCTTCTCTCATATTATTTTGCCGCCGCAAACTCACCGGCACGCCTCCCAGGCTGCTACGCCAATAACAAATCGCCGTCGATGTATGTCTGAATCAAATGTTTTTTCCTTTTATTTGTCATTTTTTCGATTTAAGATTCGTAACTAGTAAATTTGGAGCGATTCTAATGGTTTCTTTTTTGTATTTGTTCTTTTCATGGACGACCCGACCCTTCTTTGCCCTTGTTTCCTCACTCAGCGTGTCTTGCTTCAACCGCTGCAGCCGCTCCCAGTACCGCTGGAAAATAAGTCTCCGCCGTCGTCCATTGCTGACGGACTGTAA

mRNA sequence

ATGCGTGATAAGACGACGCGGTTTTTGGCTGCTACGCCAATAACAAATCGCCGTCGATGTATGTCTGAATCAAATCGTGTCTTGCTTCAACCGCTGCAGCCGCTCCCAGTACCGCTGGAAAATAAGTCTCCGCCGTCGTCCATTGCTGACGGACTGTAA

Coding sequence (CDS)

ATGCGTGATAAGACGACGCGGTTTTTGGCTGCTACGCCAATAACAAATCGCCGTCGATGTATGTCTGAATCAAATCGTGTCTTGCTTCAACCGCTGCAGCCGCTCCCAGTACCGCTGGAAAATAAGTCTCCGCCGTCGTCCATTGCTGACGGACTGTAA

Protein sequence

MRDKTTRFLAATPITNRRRCMSESNRVLLQPLQPLPVPLENKSPPSSIADGL
Homology
[Close]
BLAST of PI0020125 vs. ExPASy TrEMBL
Match: A0A0A0K754 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G450670 PE=4 SV=1)

HSP 1 Score: 69.3 bits (168), Expect = 5.3e-09
Identity = 37/52 (71.15%), Postives = 41/52 (78.85%), Query Frame = 0 

Query: 1  MRDKTTRFLAATPITNRRRCMSESNRVLLQPLQPLPVPLENKSPPSSIADGL 53
          MRDKTTRFLAATP+   R+     +RVLLQPL+P PVP ENKSPPSSIA GL
Sbjct: 1  MRDKTTRFLAATPLRPPRQPRIAFDRVLLQPLKPPPVPTENKSPPSSIAVGL 52

[Close]
BLAST of PI0020125 vs. NCBI nr
Match: KGN45510.1 (hypothetical protein Csa_016688 [Cucumis sativus])

HSP 1 Score: 69.3 bits (168), Expect = 1.1e-08
Identity = 37/52 (71.15%), Postives = 41/52 (78.85%), Query Frame = 0 

Query: 1  MRDKTTRFLAATPITNRRRCMSESNRVLLQPLQPLPVPLENKSPPSSIADGL 53
          MRDKTTRFLAATP+   R+     +RVLLQPL+P PVP ENKSPPSSIA GL
Sbjct: 1  MRDKTTRFLAATPLRPPRQPRIAFDRVLLQPLKPPPVPTENKSPPSSIAVGL 52

The following BLAST results are available for this feature:
BLAST of PI0020125 vs.
Match NameE-valueIdentityDescription
BLAST of PI0020125 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K7545.3e-0971.15Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G450670 PE=4 SV=1[more]
BLAST of PI0020125 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN45510.11.1e-0871.15hypothetical protein Csa_016688 [Cucumis sativus][more]
BLAST of PI0020125 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
PI0020125.1PI0020125.1mRNA