PI0019952 (gene) Melon (PI 482460) v1

Overview


Name	PI0019952
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	Unknown protein
Location	chr06: 12763420 .. 12763950 (+)
RNA-Seq Expression	PI0019952
Synteny	PI0019952

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACCGGATCTTCAAGCCACCAAGACCAGATTAGAGTGCGTTCCGATGGTCCTGAATCAGAACGTCCTACAACGCGAGGAAGTGGCGAGCAAAGAACGCCACAGTACACCCACCTGAAACATGGCAAAGGTAAGGTGTTACTTAAACCTCCGCCGAAAGCATATGACAATTTCTTGAAGGTAGAGGTTGACAATTTGGATCAAGATGCGGTGCTCGAATTTCTCAACGAGCGGATGAAAAAGAGGAAGGATGCTCACATCAAGAGGAAGAAGGAAGCTTGTCGCAGGAAGGACGACCGCGAGCAAATGAGACTTGAAGAAACTCGAAAGGCGAAGAGCACATTAGAAATACGCTCACCGTCTAACGAGGTTGCAGAGCTACACAAAAAGATCTCTGACAAGCTTGCACAGGTCTCGTTTGCCAAAATGAGGAAAACAATTGAGGCAGTTAAGACTGCCTTAAAAAGGAAGGAAGAAAAGAAAAAGATGCTTGCGGACCTGATCGAGTGGCGGAGCTCCCCGCGAAAGTAA

mRNA sequence

ATGACCGGATCTTCAAGCCACCAAGACCAGATTAGAGTGCGTTCCGATGGTCCTGAATCAGAACGTCCTACAACGCGAGGAAGTGGCGAGCAAAGAACGCCACAGTACACCCACCTGAAACATGGCAAAGGTAAGGTGTTACTTAAACCTCCGCCGAAAGCATATGACAATTTCTTGAAGGTAGAGGTTGACAATTTGGATCAAGATGCGGTGCTCGAATTTCTCAACGAGCGGATGAAAAAGAGGAAGGATGCTCACATCAAGAGGAAGAAGGAAGCTTGTCGCAGGAAGGACGACCGCGAGCAAATGAGACTTGAAGAAACTCGAAAGGCGAAGAGCACATTAGAAATACGCTCACCGTCTAACGAGGTTGCAGAGCTACACAAAAAGATCTCTGACAAGCTTGCACAGGTCTCGTTTGCCAAAATGAGGAAAACAATTGAGGCAGTTAAGACTGCCTTAAAAAGGAAGGAAGAAAAGAAAAAGATGCTTGCGGACCTGATCGAGTGGCGGAGCTCCCCGCGAAAGTAA

Coding sequence (CDS)

ATGACCGGATCTTCAAGCCACCAAGACCAGATTAGAGTGCGTTCCGATGGTCCTGAATCAGAACGTCCTACAACGCGAGGAAGTGGCGAGCAAAGAACGCCACAGTACACCCACCTGAAACATGGCAAAGGTAAGGTGTTACTTAAACCTCCGCCGAAAGCATATGACAATTTCTTGAAGGTAGAGGTTGACAATTTGGATCAAGATGCGGTGCTCGAATTTCTCAACGAGCGGATGAAAAAGAGGAAGGATGCTCACATCAAGAGGAAGAAGGAAGCTTGTCGCAGGAAGGACGACCGCGAGCAAATGAGACTTGAAGAAACTCGAAAGGCGAAGAGCACATTAGAAATACGCTCACCGTCTAACGAGGTTGCAGAGCTACACAAAAAGATCTCTGACAAGCTTGCACAGGTCTCGTTTGCCAAAATGAGGAAAACAATTGAGGCAGTTAAGACTGCCTTAAAAAGGAAGGAAGAAAAGAAAAAGATGCTTGCGGACCTGATCGAGTGGCGGAGCTCCCCGCGAAAGTAA

Protein sequence

MTGSSSHQDQIRVRSDGPESERPTTRGSGEQRTPQYTHLKHGKGKVLLKPPPKAYDNFLKVEVDNLDQDAVLEFLNERMKKRKDAHIKRKKEACRRKDDREQMRLEETRKAKSTLEIRSPSNEVAELHKKISDKLAQVSFAKMRKTIEAVKTALKRKEEKKKMLADLIEWRSSPRK

Homology

The following BLAST results are available for this feature:

BLAST of PI0019952 vs.


Match Name	E-value	Identity	Description

BLAST of PI0019952 vs.


Match Name	E-value	Identity	Description

BLAST of PI0019952 vs.


Match Name	E-value	Identity	Description

BLAST of PI0019952 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 140..167
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 81..113
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..48
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 12..26
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 91..113

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0019952.1	PI0019952.1	mRNA