PI0019878 (gene) Melon (PI 482460) v1

Overview


Name	PI0019878
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	C2H2-type domain-containing protein
Location	chr08: 16610593 .. 16612909 (+)
RNA-Seq Expression	PI0019878
Synteny	PI0019878

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTTTTTCCTTTTATTTGAGAAAGAGAGGAACAATTTTTGCAGATAAAATAAACATGAAATATTCTGTTTCAGGTCATCATAGTTTTTGGAGCTTTCTTTTTAAGCCAAACAAACAAACCACACCCAAAACTCATCTCTTTTTCCCTTTCTTTACTACACTCTCTCCATCTCCAAAGAAAAAACAAACTTTTCTCTTTTATATATTCATCGTCTTCTTCTTCTTCTTCTTCTTTCTGAGGTTCCTTTTCTTCTTTGTCTTTGAGCCAAAAAAATTTCATTTTTCTGTTTGATTTATTTGGGGACTTCTCATCAAAACCATACAGAATCTTTGAGCTGCTATTTGGTTTGAATTTGTTTTTGTGTAAGGGTTTAGGCTTTTTTTTTGGTGATGATGATGTCTGGTATTGACTTTTCTGTTTCTTCTAATTGTATTGGAGAATTTGGTGATCATCATCGTCATCAACAACAAACTTCTCAACTTTATCATCATCATCAGCATCATCTTCTTCCTCTTAACCCTAACCCTAATCCTAACCCTATTATTCAAAATCTTGATTCTTCTTCTTCTCTTCCTCCTTCTCTCCCCAAGAAGAAGAGAAATTTGCCAGGAAAACCAGGTCTGTTTTTTCTCTCTCTTGATATTTTGTTCTTTATTTTCAGCTTATTTAAATATTTGATTTATGCGATACCTATTTGGAAAAGTTCATCGGCTTGATTCACTGTTTATTGAAAATAGGAAAATATATCTCTTGAAACAAATACAAGGATTTTAGATTAGAATCCTTTGTTTTTTATGAGTTTAATGGTGGTGATTTTGTTTTTTATTCTCTGTTTGCAAAATTATGTTTGCGAAAATTAAGCTAACGTTACTTTTACTATAGTTCTTTTTACCACCTACCTTTCATCGTTTAAAATCTAAGTAAAACTTAAAACCTCAAAAAAATAATAATAATAAATAAATAAATAAAATATATATATATATATATATATATAGCTTTTATAAACTTGATTTTACTTTTGAAATTTGGATTAGAATTAAAATAGGCCAATACTTTAAAATGTAAATAAATGATACAATTGGATAACTATTGAGTTTTTTAGTTTTTTCTTTTTTTTTTTTTTGCAAATTATGTTTATCAAAATTATTTCCCTATAAGTTTTTATGCTGTCATCCACTTTTAATAAAACAAATATTGAGGTGCATATCGGAGTACACCAATCTTAATTTGTATATCCCAACAAGTTGTCCAAATTATAATTATCATTGGATAATTTCTTCTTACTTCCTTTATATAATATTTTAATTTACTGTTTGTGTATAATGAGTGGGATGAAAAAAATGAATGTAATGGATGGATGCATTGAAGCATTGCTCTTTAATAACATTTTAAAAAATCAAGTCAGATTTTGATTTTGATTTTTTAAAAAAAGTTTTATTTTTAGAATTTGACTAGAAAAGAAAACCATAAATAAAAATATATAAATATAAAAAACAAAATCGTTAGCAGATAGAACCTAATGATATATTTATATGACGTATCTTTATGCAGATCCAGATGCAGAGGTAATTGCTTTATCTCCAAACACACTAATGGCAACTAACAGATTCGTGTGTGAATATGCAACAAAGGGTTTCAAAGAGACCAAAACTTACAACTACACAGAAGAGGACACAATTTACCATGGAAGCTAAGACAAAGAAGCAACAAAGAAGCAGTAGTAGTGAAGAAGAAAGTATATTTGCCCTGAAAAATGTTGTGTTCATCACGATCCAAGCAGAGCACTTGGGGACCTAACAGGAATTAAAAAACATTATAGTAGAAAACATGGGGAGAAGAAATGGAAGTGTGAGAAATGTTGTAAGAAATATGCTGTTCAATCTGATGGAAAGCTCACTCTAAGACTTGTGGTACTAGAGACTACAAATGTGACTGTGGAACACTCTTTCAAGGTCATTTCTATTTCTTTACTCTACCTCTCTTTCTTTATTTTATTATTATAACGTTCTCCTTCGTTTTTGAGTTTGTCGTGGTTTAGTTAACTTTTGGTCTAGCTGATATAAGACTTTGATTAATTGAACATTCTTGCTGCTTGAATACATATACTGTTGAAAAGGAAGCTTGATGTTTGTTTTGATACATATTATTTAATAATTATAGTACTAAATCTATTTGGATTAACTTTTTCGTTTTGAAAATTTGGGTTTGACATTGGTAATTAGATTTTAAAGTATTTTGAAGGTCAATTCAAATAGGTTAATGTTTTTGGTTTACATATTAATTTTAATAATAAAATATGATAATAAATAGTTTCGGG

mRNA sequence

TTTTTTTCCTTTTATTTGAGAAAGAGAGGAACAATTTTTGCAGATAAAATAAACATGAAATATTCTGTTTCAGGTCATCATAGTTTTTGGAGCTTTCTTTTTAAGCCAAACAAACAAACCACACCCAAAACTCATCTCTTTTTCCCTTTCTTTACTACACTCTCTCCATCTCCAAAGAAAAAACAAACTTTTCTCTTTTATATATTCATCGTCTTCTTCTTCTTCTTCTTCTTTCTGAGGTTCCTTTTCTTCTTTGTCTTTGAGCCAAAAAAATTTCATTTTTCTGTTTGATTTATTTGGGGACTTCTCATCAAAACCATACAGAATCTTTGAGCTGCTATTTGGTTTGAATTTGTTTTTGTGTAAGGGTTTAGGCTTTTTTTTTGGTGATGATGATGTCTGGTATTGACTTTTCTGTTTCTTCTAATTGTATTGGAGAATTTGGTGATCATCATCGTCATCAACAACAAACTTCTCAACTTTATCATCATCATCAGCATCATCTTCTTCCTCTTAACCCTAACCCTAATCCTAACCCTATTATTCAAAATCTTGATTCTTCTTCTTCTCTTCCTCCTTCTCTCCCCAAGAAGAAGAGAAATTTGCCAGGAAAACCAGATCCAGATGCAGAGGTAATTGCTTTATCTCCAAACACACTAATGGCAACTAACAGATTCGTGTGTGAATATGCAACAAAGGGTTTCAAAGAGACCAAAACTTACAACTACACAGAAGAGGACACAATTTACCATGGAAGCTAAGACAAAGAAGCAACAAAGAAGCAGTAGTAGTGAAGAAGAAAGTATATTTGCCCTGAAAAATGTTGTGTTCATCACGATCCAAGCAGAGCACTTGGGGACCTAACAGGAATTAAAAAACATTATAGTAGAAAACATGGGGAGAAGAAATGGAAGTGTGAGAAATGTTGTAAGAAATATGCTGTTCAATCTGATGGAAAGCTCACTCTAAGACTTGTGGTACTAGAGACTACAAATGTGACTGTGGAACACTCTTTCAAGGTCATTTCTATTTCTTTACTCTACCTCTCTTTCTTTATTTTATTATTATAACGTTCTCCTTCGTTTTTGAGTTTGTCGTGGTTTAGTTAACTTTTGGTCTAGCTGATATAAGACTTTGATTAATTGAACATTCTTGCTGCTTGAATACATATACTGTTGAAAAGGAAGCTTGATGTTTGTTTTGATACATATTATTTAATAATTATAGTACTAAATCTATTTGGATTAACTTTTTCGTTTTGAAAATTTGGGTTTGACATTGGTAATTAGATTTTAAAGTATTTTGAAGGTCAATTCAAATAGGTTAATGTTTTTGGTTTACATATTAATTTTAATAATAAAATATGATAATAAATAGTTTCGGG

Coding sequence (CDS)

ATGATGATGTCTGGTATTGACTTTTCTGTTTCTTCTAATTGTATTGGAGAATTTGGTGATCATCATCGTCATCAACAACAAACTTCTCAACTTTATCATCATCATCAGCATCATCTTCTTCCTCTTAACCCTAACCCTAATCCTAACCCTATTATTCAAAATCTTGATTCTTCTTCTTCTCTTCCTCCTTCTCTCCCCAAGAAGAAGAGAAATTTGCCAGGAAAACCAGATCCAGATGCAGAGGTAATTGCTTTATCTCCAAACACACTAATGGCAACTAACAGATTCGTGTGTGAATATGCAACAAAGGGTTTCAAAGAGACCAAAACTTACAACTACACAGAAGAGGACACAATTTACCATGGAAGCTAA

Protein sequence

MMMSGIDFSVSSNCIGEFGDHHRHQQQTSQLYHHHQHHLLPLNPNPNPNPIIQNLDSSSSLPPSLPKKKRNLPGKPDPDAEVIALSPNTLMATNRFVCEYATKGFKETKTYNYTEEDTIYHGS

Homology

[Close]

BLAST of PI0019878 vs. ExPASy Swiss-Prot
Match: Q700D2 (Zinc finger protein JACKDAW OS=Arabidopsis thaliana OX=3702 GN=JKD PE=1 SV=1)

HSP 1 Score: 85.5 bits (210), Expect = 4.6e-16
Identity = 54/105 (51.43%), Postives = 63/105 (60.00%), Query Frame = 0


Query: 2   MMSGIDFSVSSNCIGEFGDHHRHQQQTSQLYHHHQHHLLPLNPNPNPNPIIQNLDSSSSL 61
           M+ G  FS+SS+ +G F     H        HH Q  +  LNPN NPNP  +   SS+  
Sbjct: 3   MIPGDPFSISSS-MGGFVHQETH-------LHHLQQQIPDLNPNSNPNPNAKPNSSSA-- 62

Query: 62  PPSLPKKKRNLPGKPDPDAEVIALSPNTLMATNRFVCEYATKGFK 107
                KKKRN PG PDPDA+VIALSP TLMATNRFVCE   KGF+
Sbjct: 63  -----KKKRNQPGTPDPDADVIALSPTTLMATNRFVCEICNKGFQ 92

[Close]

BLAST of PI0019878 vs. ExPASy Swiss-Prot
Match: Q944L3 (Zinc finger protein BALDIBIS OS=Arabidopsis thaliana OX=3702 GN=BIB PE=1 SV=1)

HSP 1 Score: 85.1 bits (209), Expect = 6.0e-16
Identity = 47/83 (56.63%), Postives = 52/83 (62.65%), Query Frame = 0


Query: 24  HQQQTSQLYHHHQHHLLPLNPNPNPNPIIQNLDSSSSLPPSLPKKKRNLPGKPDPDAEVI 83
           H   +   Y  HQ H+ P NPNPNPNP   N            K+KRNLPG PDPDAEVI
Sbjct: 7   HHPLSFPSYVLHQEHIAP-NPNPNPNPTSSN----------SAKRKRNLPGNPDPDAEVI 66

Query: 84  ALSPNTLMATNRFVCEYATKGFK 107
           ALSPN+LM TNRF+CE   KGFK
Sbjct: 67  ALSPNSLMTTNRFICEVCNKGFK 78

[Close]

BLAST of PI0019878 vs. ExPASy Swiss-Prot
Match: Q9LVQ7 (Zinc finger protein ENHYDROUS OS=Arabidopsis thaliana OX=3702 GN=ENY PE=1 SV=1)

HSP 1 Score: 75.5 bits (184), Expect = 4.7e-13
Identity = 36/55 (65.45%), Postives = 42/55 (76.36%), Query Frame = 0


Query: 52  IQNLDSSSSLPPSLPKKKRNLPGKPDPDAEVIALSPNTLMATNRFVCEYATKGFK 107
           + +  + +  P S+ KKKRNLPG PDPDAEVIALSP TLMATNRFVCE   KGF+
Sbjct: 17  VSSTGNQNLTPKSVGKKKRNLPGMPDPDAEVIALSPKTLMATNRFVCEICNKGFQ 71

[Close]

BLAST of PI0019878 vs. ExPASy Swiss-Prot
Match: Q9SCQ6 (Zinc finger protein GAI-ASSOCIATED FACTOR 1 OS=Arabidopsis thaliana OX=3702 GN=GAF1 PE=1 SV=1)

HSP 1 Score: 73.2 bits (178), Expect = 2.4e-12
Identity = 35/55 (63.64%), Postives = 42/55 (76.36%), Query Frame = 0


Query: 52  IQNLDSSSSLPPSLPKKKRNLPGKPDPDAEVIALSPNTLMATNRFVCEYATKGFK 107
           I +  + + LP S  KKKRNLPG PDP++EVIALSP TL+ATNRFVCE   KGF+
Sbjct: 19  ISSTGNQNPLPNSTGKKKRNLPGMPDPESEVIALSPKTLLATNRFVCEICNKGFQ 73

[Close]

BLAST of PI0019878 vs. ExPASy Swiss-Prot
Match: Q9ZWA6 (Zinc finger protein MAGPIE OS=Arabidopsis thaliana OX=3702 GN=MGP PE=1 SV=1)

HSP 1 Score: 72.8 bits (177), Expect = 3.1e-12
Identity = 43/92 (46.74%), Postives = 49/92 (53.26%), Query Frame = 0


Query: 15  IGEFGDHHRHQQQTSQLYHHHQHHLLPLNPNPNPNPIIQNLDSSSSLPPSLPKKKRNLPG 74
           I   G + +    T  + HHH                    D   SL P L KKKRNLPG
Sbjct: 8   ISSSGGYVQSSSTTDHVDHHHH-------------------DQHESLNPPLVKKKRNLPG 67

Query: 75  KPDPDAEVIALSPNTLMATNRFVCEYATKGFK 107
            PDP+AEVIALSP TLMATNRF+CE   KGF+
Sbjct: 68  NPDPEAEVIALSPKTLMATNRFLCEICGKGFQ 80

[Close]

BLAST of PI0019878 vs. ExPASy TrEMBL
Match: A0A1S3BM97 (protein indeterminate-domain 9 OS=Cucumis melo OX=3656 GN=LOC103491197 PE=4 SV=1)

HSP 1 Score: 197.2 bits (500), Expect = 4.0e-47
Identity = 96/106 (90.57%), Postives = 100/106 (94.34%), Query Frame = 0


Query: 1   MMMSGIDFSVSSNCIGEFGDHHRHQQQTSQLYHHHQHHLLPLNPNPNPNPIIQNLDSSSS 60
           MMMSGIDFSVSSNCIGEFGDHHRHQQQTSQLYH+H H LLPLNPNP PNPIIQN+DSSSS
Sbjct: 1   MMMSGIDFSVSSNCIGEFGDHHRHQQQTSQLYHNHHHLLLPLNPNPIPNPIIQNVDSSSS 60

Query: 61  LPPSLPKKKRNLPGKPDPDAEVIALSPNTLMATNRFVCEYATKGFK 107
           LPPSLPKKKRNLPGKPDPDAEVIALSPNTLMATNRF+CE   KGF+
Sbjct: 61  LPPSLPKKKRNLPGKPDPDAEVIALSPNTLMATNRFICEVCNKGFQ 106

[Close]

BLAST of PI0019878 vs. ExPASy TrEMBL
Match: A0A0A0KIB8 (C2H2-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G445020 PE=4 SV=1)

HSP 1 Score: 190.7 bits (483), Expect = 3.7e-45
Identity = 96/108 (88.89%), Postives = 99/108 (91.67%), Query Frame = 0


Query: 1   MMMSGIDFSVSSNCIGEFGDHHRHQQQTSQLYHHHQHHLLPLNPNPNPNPIIQNLDSS-- 60
           MMMSGIDFSVSSNCIGEFGDHHRHQQQTSQL H+H HHLL LNPNP PNPIIQNLDSS  
Sbjct: 1   MMMSGIDFSVSSNCIGEFGDHHRHQQQTSQLSHNHHHHLLRLNPNPIPNPIIQNLDSSSA 60

Query: 61  SSLPPSLPKKKRNLPGKPDPDAEVIALSPNTLMATNRFVCEYATKGFK 107
           SSLPPSLPKKKRNLPGKPDPDAEVIALSPNTLMATNRF+CE   KGF+
Sbjct: 61  SSLPPSLPKKKRNLPGKPDPDAEVIALSPNTLMATNRFICEICNKGFQ 108

[Close]

BLAST of PI0019878 vs. ExPASy TrEMBL
Match: A0A6J1CRP6 (protein indeterminate-domain 9-like OS=Momordica charantia OX=3673 GN=LOC111013576 PE=4 SV=1)

HSP 1 Score: 117.9 bits (294), Expect = 3.1e-23
Identity = 67/105 (63.81%), Postives = 73/105 (69.52%), Query Frame = 0


Query: 2   MMSGIDFSVSSNCIGEFGDHHRHQQQTSQLYHHHQHHLLPLNPNPNPNPIIQNLDSSSSL 61
           MMSGIDF    + +GE         Q+SQLY       LP NPNPNPNP   N +S S L
Sbjct: 1   MMSGIDFCAVPSSVGEL--------QSSQLY-------LPPNPNPNPNP-NPNPNSDSQL 60

Query: 62  PPSLPKKKRNLPGKPDPDAEVIALSPNTLMATNRFVCEYATKGFK 107
            PSLPKKKRNLPGKPDPDAEVIALSPNTLMATNRF+CE   KGF+
Sbjct: 61  LPSLPKKKRNLPGKPDPDAEVIALSPNTLMATNRFICEICNKGFQ 89

[Close]

BLAST of PI0019878 vs. ExPASy TrEMBL
Match: A0A6J1HDF4 (protein indeterminate-domain 9-like OS=Cucurbita moschata OX=3662 GN=LOC111463149 PE=4 SV=1)

HSP 1 Score: 92.8 bits (229), Expect = 1.1e-15
Identity = 50/81 (61.73%), Postives = 54/81 (66.67%), Query Frame = 0


Query: 26  QQTSQLYHHHQHHLLPLNPNPNPNPIIQNLDSSSSLPPSLPKKKRNLPGKPDPDAEVIAL 85
           +Q+SQLYH      LP NPNPNPNP               PKKKRN PGKPDPDAEVIAL
Sbjct: 3   EQSSQLYH------LPHNPNPNPNP--------------NPKKKRNFPGKPDPDAEVIAL 62

Query: 86  SPNTLMATNRFVCEYATKGFK 107
           SPN LMATNRF+CE   KGF+
Sbjct: 63  SPNALMATNRFICEICNKGFQ 63

[Close]

BLAST of PI0019878 vs. ExPASy TrEMBL
Match: R0HJJ2 (C2H2-type domain-containing protein OS=Capsella rubella OX=81985 GN=CARUB_v10017213mg PE=4 SV=1)

HSP 1 Score: 89.7 bits (221), Expect = 9.0e-15
Identity = 48/87 (55.17%), Postives = 54/87 (62.07%), Query Frame = 0


Query: 20  DHHRHQQQTSQLYHHHQHHLLPLNPNPNPNPIIQNLDSSSSLPPSLPKKKRNLPGKPDPD 79
           D H H   +   Y  HQ H+ P +PNPNPN    N            K+KRNLPG PDPD
Sbjct: 5   DDHHHHHLSFPSYVLHQEHITPNDPNPNPNATSSN----------SAKRKRNLPGNPDPD 64

Query: 80  AEVIALSPNTLMATNRFVCEYATKGFK 107
           AEVIALSPN+LMATNRF+CE   KGFK
Sbjct: 65  AEVIALSPNSLMATNRFICEVCNKGFK 81

[Close]

BLAST of PI0019878 vs. NCBI nr
Match: XP_008449264.1 (PREDICTED: protein indeterminate-domain 9 [Cucumis melo])

HSP 1 Score: 197.2 bits (500), Expect = 8.2e-47
Identity = 96/106 (90.57%), Postives = 100/106 (94.34%), Query Frame = 0


Query: 1   MMMSGIDFSVSSNCIGEFGDHHRHQQQTSQLYHHHQHHLLPLNPNPNPNPIIQNLDSSSS 60
           MMMSGIDFSVSSNCIGEFGDHHRHQQQTSQLYH+H H LLPLNPNP PNPIIQN+DSSSS
Sbjct: 1   MMMSGIDFSVSSNCIGEFGDHHRHQQQTSQLYHNHHHLLLPLNPNPIPNPIIQNVDSSSS 60

Query: 61  LPPSLPKKKRNLPGKPDPDAEVIALSPNTLMATNRFVCEYATKGFK 107
           LPPSLPKKKRNLPGKPDPDAEVIALSPNTLMATNRF+CE   KGF+
Sbjct: 61  LPPSLPKKKRNLPGKPDPDAEVIALSPNTLMATNRFICEVCNKGFQ 106

[Close]

BLAST of PI0019878 vs. NCBI nr
Match: XP_004143353.2 (zinc finger protein BALDIBIS [Cucumis sativus] >KGN48137.1 hypothetical protein Csa_004051 [Cucumis sativus])

HSP 1 Score: 190.7 bits (483), Expect = 7.7e-45
Identity = 96/108 (88.89%), Postives = 99/108 (91.67%), Query Frame = 0


Query: 1   MMMSGIDFSVSSNCIGEFGDHHRHQQQTSQLYHHHQHHLLPLNPNPNPNPIIQNLDSS-- 60
           MMMSGIDFSVSSNCIGEFGDHHRHQQQTSQL H+H HHLL LNPNP PNPIIQNLDSS  
Sbjct: 1   MMMSGIDFSVSSNCIGEFGDHHRHQQQTSQLSHNHHHHLLRLNPNPIPNPIIQNLDSSSA 60

Query: 61  SSLPPSLPKKKRNLPGKPDPDAEVIALSPNTLMATNRFVCEYATKGFK 107
           SSLPPSLPKKKRNLPGKPDPDAEVIALSPNTLMATNRF+CE   KGF+
Sbjct: 61  SSLPPSLPKKKRNLPGKPDPDAEVIALSPNTLMATNRFICEICNKGFQ 108

[Close]

BLAST of PI0019878 vs. NCBI nr
Match: XP_038883199.1 (zinc finger protein BALDIBIS-like [Benincasa hispida])

HSP 1 Score: 137.1 bits (344), Expect = 1.0e-28
Identity = 77/105 (73.33%), Postives = 85/105 (80.95%), Query Frame = 0


Query: 2   MMSGIDFSVSSNCIGEFGDHHRHQQQTSQLYHHHQHHLLPLNPNPNPNPIIQNLDSSSSL 61
           MMSGIDFSVSS+ IGEFG+   +QQQ+SQLY+HH    LP +PNPN     QNLD  SSL
Sbjct: 1   MMSGIDFSVSSSSIGEFGN---NQQQSSQLYYHH----LPHSPNPN-----QNLD--SSL 60

Query: 62  PPSLPKKKRNLPGKPDPDAEVIALSPNTLMATNRFVCEYATKGFK 107
           PP LPKKKRNLPGKPDPDAEVIALSPNTLMATNRF+CE   KGF+
Sbjct: 61  PPPLPKKKRNLPGKPDPDAEVIALSPNTLMATNRFICEICNKGFQ 91

[Close]

BLAST of PI0019878 vs. NCBI nr
Match: XP_022143732.1 (protein indeterminate-domain 9-like [Momordica charantia])

HSP 1 Score: 117.9 bits (294), Expect = 6.4e-23
Identity = 67/105 (63.81%), Postives = 73/105 (69.52%), Query Frame = 0


Query: 2   MMSGIDFSVSSNCIGEFGDHHRHQQQTSQLYHHHQHHLLPLNPNPNPNPIIQNLDSSSSL 61
           MMSGIDF    + +GE         Q+SQLY       LP NPNPNPNP   N +S S L
Sbjct: 1   MMSGIDFCAVPSSVGEL--------QSSQLY-------LPPNPNPNPNP-NPNPNSDSQL 60

Query: 62  PPSLPKKKRNLPGKPDPDAEVIALSPNTLMATNRFVCEYATKGFK 107
            PSLPKKKRNLPGKPDPDAEVIALSPNTLMATNRF+CE   KGF+
Sbjct: 61  LPSLPKKKRNLPGKPDPDAEVIALSPNTLMATNRFICEICNKGFQ 89

[Close]

BLAST of PI0019878 vs. NCBI nr
Match: XP_023518386.1 (protein indeterminate-domain 9-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 92.8 bits (229), Expect = 2.2e-15
Identity = 50/81 (61.73%), Postives = 54/81 (66.67%), Query Frame = 0


Query: 26  QQTSQLYHHHQHHLLPLNPNPNPNPIIQNLDSSSSLPPSLPKKKRNLPGKPDPDAEVIAL 85
           +Q+SQLYH      LP NPNPNPNP               PKKKRN PGKPDPDAEVIAL
Sbjct: 3   EQSSQLYH------LPHNPNPNPNP--------------NPKKKRNFPGKPDPDAEVIAL 62

Query: 86  SPNTLMATNRFVCEYATKGFK 107
           SPN LMATNRF+CE   KGF+
Sbjct: 63  SPNALMATNRFICEICNKGFQ 63

[Close]

BLAST of PI0019878 vs. TAIR 10
Match: AT5G03150.1 (C2H2-like zinc finger protein )

HSP 1 Score: 85.5 bits (210), Expect = 3.3e-17
Identity = 54/105 (51.43%), Postives = 63/105 (60.00%), Query Frame = 0


Query: 2   MMSGIDFSVSSNCIGEFGDHHRHQQQTSQLYHHHQHHLLPLNPNPNPNPIIQNLDSSSSL 61
           M+ G  FS+SS+ +G F     H        HH Q  +  LNPN NPNP  +   SS+  
Sbjct: 3   MIPGDPFSISSS-MGGFVHQETH-------LHHLQQQIPDLNPNSNPNPNAKPNSSSA-- 62

Query: 62  PPSLPKKKRNLPGKPDPDAEVIALSPNTLMATNRFVCEYATKGFK 107
                KKKRN PG PDPDA+VIALSP TLMATNRFVCE   KGF+
Sbjct: 63  -----KKKRNQPGTPDPDADVIALSPTTLMATNRFVCEICNKGFQ 92

[Close]

BLAST of PI0019878 vs. TAIR 10
Match: AT3G45260.1 (C2H2-like zinc finger protein )

HSP 1 Score: 85.1 bits (209), Expect = 4.3e-17
Identity = 47/83 (56.63%), Postives = 52/83 (62.65%), Query Frame = 0


Query: 24  HQQQTSQLYHHHQHHLLPLNPNPNPNPIIQNLDSSSSLPPSLPKKKRNLPGKPDPDAEVI 83
           H   +   Y  HQ H+ P NPNPNPNP   N            K+KRNLPG PDPDAEVI
Sbjct: 7   HHPLSFPSYVLHQEHIAP-NPNPNPNPTSSN----------SAKRKRNLPGNPDPDAEVI 66

Query: 84  ALSPNTLMATNRFVCEYATKGFK 107
           ALSPN+LM TNRF+CE   KGFK
Sbjct: 67  ALSPNSLMTTNRFICEVCNKGFK 78

[Close]

BLAST of PI0019878 vs. TAIR 10
Match: AT5G66730.1 (C2H2-like zinc finger protein )

HSP 1 Score: 75.5 bits (184), Expect = 3.4e-14
Identity = 36/55 (65.45%), Postives = 42/55 (76.36%), Query Frame = 0


Query: 52  IQNLDSSSSLPPSLPKKKRNLPGKPDPDAEVIALSPNTLMATNRFVCEYATKGFK 107
           + +  + +  P S+ KKKRNLPG PDPDAEVIALSP TLMATNRFVCE   KGF+
Sbjct: 17  VSSTGNQNLTPKSVGKKKRNLPGMPDPDAEVIALSPKTLMATNRFVCEICNKGFQ 71

[Close]

BLAST of PI0019878 vs. TAIR 10
Match: AT3G50700.1 (indeterminate(ID)-domain 2 )

HSP 1 Score: 73.2 bits (178), Expect = 1.7e-13
Identity = 35/55 (63.64%), Postives = 42/55 (76.36%), Query Frame = 0


Query: 52  IQNLDSSSSLPPSLPKKKRNLPGKPDPDAEVIALSPNTLMATNRFVCEYATKGFK 107
           I +  + + LP S  KKKRNLPG PDP++EVIALSP TL+ATNRFVCE   KGF+
Sbjct: 19  ISSTGNQNPLPNSTGKKKRNLPGMPDPESEVIALSPKTLLATNRFVCEICNKGFQ 73

[Close]

BLAST of PI0019878 vs. TAIR 10
Match: AT1G03840.1 (C2H2 and C2HC zinc fingers superfamily protein )

HSP 1 Score: 72.8 bits (177), Expect = 2.2e-13
Identity = 43/92 (46.74%), Postives = 49/92 (53.26%), Query Frame = 0


Query: 15  IGEFGDHHRHQQQTSQLYHHHQHHLLPLNPNPNPNPIIQNLDSSSSLPPSLPKKKRNLPG 74
           I   G + +    T  + HHH                    D   SL P L KKKRNLPG
Sbjct: 8   ISSSGGYVQSSSTTDHVDHHHH-------------------DQHESLNPPLVKKKRNLPG 67

Query: 75  KPDPDAEVIALSPNTLMATNRFVCEYATKGFK 107
            PDP+AEVIALSP TLMATNRF+CE   KGF+
Sbjct: 68  NPDPEAEVIALSPKTLMATNRFLCEICGKGFQ 80

The following BLAST results are available for this feature:

BLAST of PI0019878 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q700D2	4.6e-16	51.43	Zinc finger protein JACKDAW OS=Arabidopsis thaliana OX=3702 GN=JKD PE=1 SV=1	[more]
Q944L3	6.0e-16	56.63	Zinc finger protein BALDIBIS OS=Arabidopsis thaliana OX=3702 GN=BIB PE=1 SV=1	[more]
Q9LVQ7	4.7e-13	65.45	Zinc finger protein ENHYDROUS OS=Arabidopsis thaliana OX=3702 GN=ENY PE=1 SV=1	[more]
Q9SCQ6	2.4e-12	63.64	Zinc finger protein GAI-ASSOCIATED FACTOR 1 OS=Arabidopsis thaliana OX=3702 GN=G...	[more]
Q9ZWA6	3.1e-12	46.74	Zinc finger protein MAGPIE OS=Arabidopsis thaliana OX=3702 GN=MGP PE=1 SV=1	[more]

BLAST of PI0019878 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BM97	4.0e-47	90.57	protein indeterminate-domain 9 OS=Cucumis melo OX=3656 GN=LOC103491197 PE=4 SV=1	[more]
A0A0A0KIB8	3.7e-45	88.89	C2H2-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G445020 P...	[more]
A0A6J1CRP6	3.1e-23	63.81	protein indeterminate-domain 9-like OS=Momordica charantia OX=3673 GN=LOC1110135...	[more]
A0A6J1HDF4	1.1e-15	61.73	protein indeterminate-domain 9-like OS=Cucurbita moschata OX=3662 GN=LOC11146314...	[more]
R0HJJ2	9.0e-15	55.17	C2H2-type domain-containing protein OS=Capsella rubella OX=81985 GN=CARUB_v10017...	[more]

BLAST of PI0019878 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008449264.1	8.2e-47	90.57	PREDICTED: protein indeterminate-domain 9 [Cucumis melo]	[more]
XP_004143353.2	7.7e-45	88.89	zinc finger protein BALDIBIS [Cucumis sativus] >KGN48137.1 hypothetical protein ...	[more]
XP_038883199.1	1.0e-28	73.33	zinc finger protein BALDIBIS-like [Benincasa hispida]	[more]
XP_022143732.1	6.4e-23	63.81	protein indeterminate-domain 9-like [Momordica charantia]	[more]
XP_023518386.1	2.2e-15	61.73	protein indeterminate-domain 9-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of PI0019878 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G03150.1	3.3e-17	51.43	C2H2-like zinc finger protein	[more]
AT3G45260.1	4.3e-17	56.63	C2H2-like zinc finger protein	[more]
AT5G66730.1	3.4e-14	65.45	C2H2-like zinc finger protein	[more]
AT3G50700.1	1.7e-13	63.64	indeterminate(ID)-domain 2	[more]
AT1G03840.1	2.2e-13	46.74	C2H2 and C2HC zinc fingers superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 49..65
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 25..80
None	No IPR available	PANTHER	PTHR10593:SF155	BNAA03G00770D PROTEIN	coord: 2..109
None	No IPR available	PANTHER	PTHR10593	SERINE/THREONINE-PROTEIN KINASE RIO	coord: 2..109

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0019878.1	PI0019878.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003700	DNA-binding transcription factor activity
molecular_function	GO:0046872	metal ion binding