Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGGAGATACATTATATGTACGATGTACCTATTGTACCTCCACCAGTTAACAGGGGACGTGTTCGAGTGGAAGAACCTGAACTCGATGAAGTTTACCATAACGTAGAAGAAATACCTCCAGTGACACAAACACAGAGCCAAACTGGTTATGGTAGCCCGATGATGATGATGCCAGCTTTTGGAGCAGGATATTGTGATTCTGAGGTCGGTACAGGATATAATGACTCAGGGGTCGGTCCATCGTCTTCATACATGAATGCCGGACCATCAACTTCTTACATGCATGGACATGGACACGGACGCAACCACGGAGAACATAACGAATATCTGTACTATGAAGCACCTACAGACGTTCCAGATCCACAAGAGTACCAACAAGAACCAAAGAATCAAGAGGAGCTAAAGCAACCAAGAGTTCAGAGTCGACGACGACAACCAACCCGAAATCGACGACGTCCGGGTTGTGGAACACATTGA
mRNA sequence
ATGGAGGAGATACATTATATGTACGATGTACCTATTGTACCTCCACCAGTTAACAGGGGACGTGTTCGAGTGGAAGAACCTGAACTCGATGAAGTTTACCATAACGTAGAAGAAATACCTCCAGTGACACAAACACAGAGCCAAACTGGTTATGGTAGCCCGATGATGATGATGCCAGCTTTTGGAGCAGGATATTGTGATTCTGAGGTCGGTACAGGATATAATGACTCAGGGGTCGGTCCATCGTCTTCATACATGAATGCCGGACCATCAACTTCTTACATGCATGGACATGGACACGGACGCAACCACGGAGAACATAACGAATATCTGTACTATGAAGCACCTACAGACGTTCCAGATCCACAAGAGTACCAACAAGAACCAAAGAATCAAGAGGAGCTAAAGCAACCAAGAGTTCAGAGTCGACGACGACAACCAACCCGAAATCGACGACGTCCGGGTTGTGGAACACATTGA
Coding sequence (CDS)
ATGGAGGAGATACATTATATGTACGATGTACCTATTGTACCTCCACCAGTTAACAGGGGACGTGTTCGAGTGGAAGAACCTGAACTCGATGAAGTTTACCATAACGTAGAAGAAATACCTCCAGTGACACAAACACAGAGCCAAACTGGTTATGGTAGCCCGATGATGATGATGCCAGCTTTTGGAGCAGGATATTGTGATTCTGAGGTCGGTACAGGATATAATGACTCAGGGGTCGGTCCATCGTCTTCATACATGAATGCCGGACCATCAACTTCTTACATGCATGGACATGGACACGGACGCAACCACGGAGAACATAACGAATATCTGTACTATGAAGCACCTACAGACGTTCCAGATCCACAAGAGTACCAACAAGAACCAAAGAATCAAGAGGAGCTAAAGCAACCAAGAGTTCAGAGTCGACGACGACAACCAACCCGAAATCGACGACGTCCGGGTTGTGGAACACATTGA
Protein sequence
MEEIHYMYDVPIVPPPVNRGRVRVEEPELDEVYHNVEEIPPVTQTQSQTGYGSPMMMMPAFGAGYCDSEVGTGYNDSGVGPSSSYMNAGPSTSYMHGHGHGRNHGEHNEYLYYEAPTDVPDPQEYQQEPKNQEELKQPRVQSRRRQPTRNRRRPGCGTH
Homology
BLAST of PI0019779 vs. ExPASy TrEMBL
Match:
A0A5A7V342 (Mediator of RNA polymerase II transcription subunit 12-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold79G001560 PE=4 SV=1)
HSP 1 Score: 246.1 bits (627), Expect = 9.7e-62
Identity = 125/159 (78.62%), Postives = 137/159 (86.16%), Query Frame = 0
Query: 1 MEEIHYMYDVPIVPPPVNRGRVRVEEPELDEVYHNVEEIPPVTQTQSQTGYGSPMMMMPA 60
MEEIH MYD+PIVPPPV+RG VRVEE ELD+VYHNVEE+P TQTQSQTGYGSPM MMP
Sbjct: 66 MEEIHNMYDLPIVPPPVHRGCVRVEEAELDKVYHNVEEVPSTTQTQSQTGYGSPMTMMPT 125
Query: 61 FGAGYCDSEVGTGYNDSGVGPSSSYMNAGPSTSYMHGHGHGRNHGEHNEYLYYEAPTDVP 120
F AGYCD EVG GY D+GVGPSSSY++ PSTSYMHGH G +GEHNEYLY+EAP DV
Sbjct: 126 FEAGYCDFEVGIGYYDAGVGPSSSYVDVSPSTSYMHGHSRG--YGEHNEYLYHEAPADVS 185
Query: 121 DPQEYQQEPKNQEELKQPRVQSRRRQPTRNRRRPGCGTH 160
D QEYQQEP+NQE+ +Q RVQSRRRQPTRNRRRPGCGTH
Sbjct: 186 DRQEYQQEPENQEDREQHRVQSRRRQPTRNRRRPGCGTH 222
BLAST of PI0019779 vs. ExPASy TrEMBL
Match:
A0A5D3BSG8 (GATA zinc finger domain-containing protein 10-like isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold2044G00130 PE=4 SV=1)
HSP 1 Score: 242.3 bits (617), Expect = 1.4e-60
Identity = 124/159 (77.99%), Postives = 136/159 (85.53%), Query Frame = 0
Query: 1 MEEIHYMYDVPIVPPPVNRGRVRVEEPELDEVYHNVEEIPPVTQTQSQTGYGSPMMMMPA 60
MEEIH MYD+PIVPPPV+RG VRVEE ELD+VYHNVEE+P TQTQSQTGYGSPM MMP
Sbjct: 54 MEEIHNMYDLPIVPPPVHRGCVRVEEAELDKVYHNVEEVPSTTQTQSQTGYGSPMTMMPT 113
Query: 61 FGAGYCDSEVGTGYNDSGVGPSSSYMNAGPSTSYMHGHGHGRNHGEHNEYLYYEAPTDVP 120
F AGYCD EVG GY D+GVGPSSSY++ PSTSYMHGH G +GEHNEYLY+EAP DV
Sbjct: 114 FEAGYCDFEVGIGYYDAGVGPSSSYVDVSPSTSYMHGHRRG--YGEHNEYLYHEAPADVS 173
Query: 121 DPQEYQQEPKNQEELKQPRVQSRRRQPTRNRRRPGCGTH 160
D QEYQQEP+NQE+ +Q RVQSRRRQPTRNRR PGCGTH
Sbjct: 174 DRQEYQQEPENQEDREQHRVQSRRRQPTRNRRCPGCGTH 210
BLAST of PI0019779 vs. ExPASy TrEMBL
Match:
A0A5D3CXX3 (GATA zinc finger domain-containing protein 10-like isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold209G001390 PE=4 SV=1)
HSP 1 Score: 241.1 bits (614), Expect = 3.1e-60
Identity = 122/153 (79.74%), Postives = 133/153 (86.93%), Query Frame = 0
Query: 7 MYDVPIVPPPVNRGRVRVEEPELDEVYHNVEEIPPVTQTQSQTGYGSPMMMMPAFGAGYC 66
MYD+PIVPP V+RGRVRVEE ELDEVYHNVEE+PP TQTQSQTGYGSPMMMMP FGAGYC
Sbjct: 1 MYDLPIVPPRVHRGRVRVEEVELDEVYHNVEEVPPTTQTQSQTGYGSPMMMMPTFGAGYC 60
Query: 67 DSEVGTGYNDSGVGPSSSYMNAGPSTSYMHGHGHGRNHGEHNEYLYYEAPTDVPDPQEYQ 126
DSEV TGY D+G+GP SSYM+ GPS SYMHGHG G +GEHNEYLY+EAP DV D QEYQ
Sbjct: 61 DSEVSTGYYDAGIGPLSSYMDVGPSNSYMHGHGRG--YGEHNEYLYHEAPADVSDRQEYQ 120
Query: 127 QEPKNQEELKQPRVQSRRRQPTRNRRRPGCGTH 160
QEP+NQE+ +Q RVQSRRRQPTRNRR CGTH
Sbjct: 121 QEPENQEDREQHRVQSRRRQPTRNRRHLSCGTH 151
BLAST of PI0019779 vs. ExPASy TrEMBL
Match:
A0A5D3DJV7 (Serine/threonine-protein phosphatase 7 long form-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold419G00060 PE=4 SV=1)
HSP 1 Score: 240.7 bits (613), Expect = 4.1e-60
Identity = 123/159 (77.36%), Postives = 136/159 (85.53%), Query Frame = 0
Query: 1 MEEIHYMYDVPIVPPPVNRGRVRVEEPELDEVYHNVEEIPPVTQTQSQTGYGSPMMMMPA 60
ME+IH +YD+PIVPPPV+R R RVEE ELDEVYHNVEE+PP TQTQSQTGYGSPM MMP
Sbjct: 344 MEKIHNIYDLPIVPPPVHRERFRVEEAELDEVYHNVEEVPPTTQTQSQTGYGSPMTMMPT 403
Query: 61 FGAGYCDSEVGTGYNDSGVGPSSSYMNAGPSTSYMHGHGHGRNHGEHNEYLYYEAPTDVP 120
FGAGYCDSEV GY D+ VGP SSYM+ GPSTSYM+GHG G +GEHNEYLY+EAPTDV
Sbjct: 404 FGAGYCDSEVSIGYYDAVVGPLSSYMDVGPSTSYMYGHGRG--YGEHNEYLYHEAPTDVS 463
Query: 121 DPQEYQQEPKNQEELKQPRVQSRRRQPTRNRRRPGCGTH 160
D QEYQQEPKNQE+ +Q RVQSRRRQP RNR+ GCGTH
Sbjct: 464 DRQEYQQEPKNQEDREQHRVQSRRRQPARNRQCSGCGTH 500
BLAST of PI0019779 vs. ExPASy TrEMBL
Match:
A0A5A7SLF8 (Mediator of RNA polymerase II transcription subunit 12-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold34G002870 PE=4 SV=1)
HSP 1 Score: 215.3 bits (547), Expect = 1.8e-52
Identity = 109/143 (76.22%), Postives = 123/143 (86.01%), Query Frame = 0
Query: 1 MEEIHYMYDVPIVPPPVNRGRVRVEEPELDEVYHNVEEIPPVTQTQSQTGYGSPMMMMPA 60
MEEIH MY +PIVPP ++RGRV+VEE ELDEVYHNVEE+ P TQ Q+QTGYGSPM+MMP
Sbjct: 63 MEEIHNMYHLPIVPPQIHRGRVQVEEAELDEVYHNVEEMTPTTQKQNQTGYGSPMIMMPT 122
Query: 61 FGAGYCDSEVGTGYNDSGVGPSSSYMNAGPSTSYMHGHGHGRNHGEHNEYLYYEAPTDVP 120
FG GYCD EV T Y DSGVGPSSSYM+ GPSTSYMHGH H ++GEHNEYLY+EAPT+V
Sbjct: 123 FGVGYCDFEVNTEYYDSGVGPSSSYMDVGPSTSYMHGHRH--DYGEHNEYLYHEAPTEVS 182
Query: 121 DPQEYQQEPKNQEELKQPRVQSR 144
D QEYQQEP+NQEEL+Q RVQSR
Sbjct: 183 DRQEYQQEPENQEELEQHRVQSR 203
BLAST of PI0019779 vs. NCBI nr
Match:
KAA0062642.1 (mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa])
HSP 1 Score: 246.1 bits (627), Expect = 2.0e-61
Identity = 125/159 (78.62%), Postives = 137/159 (86.16%), Query Frame = 0
Query: 1 MEEIHYMYDVPIVPPPVNRGRVRVEEPELDEVYHNVEEIPPVTQTQSQTGYGSPMMMMPA 60
MEEIH MYD+PIVPPPV+RG VRVEE ELD+VYHNVEE+P TQTQSQTGYGSPM MMP
Sbjct: 66 MEEIHNMYDLPIVPPPVHRGCVRVEEAELDKVYHNVEEVPSTTQTQSQTGYGSPMTMMPT 125
Query: 61 FGAGYCDSEVGTGYNDSGVGPSSSYMNAGPSTSYMHGHGHGRNHGEHNEYLYYEAPTDVP 120
F AGYCD EVG GY D+GVGPSSSY++ PSTSYMHGH G +GEHNEYLY+EAP DV
Sbjct: 126 FEAGYCDFEVGIGYYDAGVGPSSSYVDVSPSTSYMHGHSRG--YGEHNEYLYHEAPADVS 185
Query: 121 DPQEYQQEPKNQEELKQPRVQSRRRQPTRNRRRPGCGTH 160
D QEYQQEP+NQE+ +Q RVQSRRRQPTRNRRRPGCGTH
Sbjct: 186 DRQEYQQEPENQEDREQHRVQSRRRQPTRNRRRPGCGTH 222
BLAST of PI0019779 vs. NCBI nr
Match:
TYK01176.1 (GATA zinc finger domain-containing protein 10-like isoform X2 [Cucumis melo var. makuwa])
HSP 1 Score: 242.3 bits (617), Expect = 2.9e-60
Identity = 124/159 (77.99%), Postives = 136/159 (85.53%), Query Frame = 0
Query: 1 MEEIHYMYDVPIVPPPVNRGRVRVEEPELDEVYHNVEEIPPVTQTQSQTGYGSPMMMMPA 60
MEEIH MYD+PIVPPPV+RG VRVEE ELD+VYHNVEE+P TQTQSQTGYGSPM MMP
Sbjct: 54 MEEIHNMYDLPIVPPPVHRGCVRVEEAELDKVYHNVEEVPSTTQTQSQTGYGSPMTMMPT 113
Query: 61 FGAGYCDSEVGTGYNDSGVGPSSSYMNAGPSTSYMHGHGHGRNHGEHNEYLYYEAPTDVP 120
F AGYCD EVG GY D+GVGPSSSY++ PSTSYMHGH G +GEHNEYLY+EAP DV
Sbjct: 114 FEAGYCDFEVGIGYYDAGVGPSSSYVDVSPSTSYMHGHRRG--YGEHNEYLYHEAPADVS 173
Query: 121 DPQEYQQEPKNQEELKQPRVQSRRRQPTRNRRRPGCGTH 160
D QEYQQEP+NQE+ +Q RVQSRRRQPTRNRR PGCGTH
Sbjct: 174 DRQEYQQEPENQEDREQHRVQSRRRQPTRNRRCPGCGTH 210
BLAST of PI0019779 vs. NCBI nr
Match:
KAA0049532.1 (GATA zinc finger domain-containing protein 10-like isoform X2 [Cucumis melo var. makuwa] >TYK16210.1 GATA zinc finger domain-containing protein 10-like isoform X2 [Cucumis melo var. makuwa])
HSP 1 Score: 241.1 bits (614), Expect = 6.4e-60
Identity = 122/153 (79.74%), Postives = 133/153 (86.93%), Query Frame = 0
Query: 7 MYDVPIVPPPVNRGRVRVEEPELDEVYHNVEEIPPVTQTQSQTGYGSPMMMMPAFGAGYC 66
MYD+PIVPP V+RGRVRVEE ELDEVYHNVEE+PP TQTQSQTGYGSPMMMMP FGAGYC
Sbjct: 1 MYDLPIVPPRVHRGRVRVEEVELDEVYHNVEEVPPTTQTQSQTGYGSPMMMMPTFGAGYC 60
Query: 67 DSEVGTGYNDSGVGPSSSYMNAGPSTSYMHGHGHGRNHGEHNEYLYYEAPTDVPDPQEYQ 126
DSEV TGY D+G+GP SSYM+ GPS SYMHGHG G +GEHNEYLY+EAP DV D QEYQ
Sbjct: 61 DSEVSTGYYDAGIGPLSSYMDVGPSNSYMHGHGRG--YGEHNEYLYHEAPADVSDRQEYQ 120
Query: 127 QEPKNQEELKQPRVQSRRRQPTRNRRRPGCGTH 160
QEP+NQE+ +Q RVQSRRRQPTRNRR CGTH
Sbjct: 121 QEPENQEDREQHRVQSRRRQPTRNRRHLSCGTH 151
BLAST of PI0019779 vs. NCBI nr
Match:
TYK23842.1 (serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa])
HSP 1 Score: 240.7 bits (613), Expect = 8.4e-60
Identity = 123/159 (77.36%), Postives = 136/159 (85.53%), Query Frame = 0
Query: 1 MEEIHYMYDVPIVPPPVNRGRVRVEEPELDEVYHNVEEIPPVTQTQSQTGYGSPMMMMPA 60
ME+IH +YD+PIVPPPV+R R RVEE ELDEVYHNVEE+PP TQTQSQTGYGSPM MMP
Sbjct: 344 MEKIHNIYDLPIVPPPVHRERFRVEEAELDEVYHNVEEVPPTTQTQSQTGYGSPMTMMPT 403
Query: 61 FGAGYCDSEVGTGYNDSGVGPSSSYMNAGPSTSYMHGHGHGRNHGEHNEYLYYEAPTDVP 120
FGAGYCDSEV GY D+ VGP SSYM+ GPSTSYM+GHG G +GEHNEYLY+EAPTDV
Sbjct: 404 FGAGYCDSEVSIGYYDAVVGPLSSYMDVGPSTSYMYGHGRG--YGEHNEYLYHEAPTDVS 463
Query: 121 DPQEYQQEPKNQEELKQPRVQSRRRQPTRNRRRPGCGTH 160
D QEYQQEPKNQE+ +Q RVQSRRRQP RNR+ GCGTH
Sbjct: 464 DRQEYQQEPKNQEDREQHRVQSRRRQPARNRQCSGCGTH 500
BLAST of PI0019779 vs. NCBI nr
Match:
KAA0025972.1 (mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa])
HSP 1 Score: 215.3 bits (547), Expect = 3.8e-52
Identity = 109/143 (76.22%), Postives = 123/143 (86.01%), Query Frame = 0
Query: 1 MEEIHYMYDVPIVPPPVNRGRVRVEEPELDEVYHNVEEIPPVTQTQSQTGYGSPMMMMPA 60
MEEIH MY +PIVPP ++RGRV+VEE ELDEVYHNVEE+ P TQ Q+QTGYGSPM+MMP
Sbjct: 63 MEEIHNMYHLPIVPPQIHRGRVQVEEAELDEVYHNVEEMTPTTQKQNQTGYGSPMIMMPT 122
Query: 61 FGAGYCDSEVGTGYNDSGVGPSSSYMNAGPSTSYMHGHGHGRNHGEHNEYLYYEAPTDVP 120
FG GYCD EV T Y DSGVGPSSSYM+ GPSTSYMHGH H ++GEHNEYLY+EAPT+V
Sbjct: 123 FGVGYCDFEVNTEYYDSGVGPSSSYMDVGPSTSYMHGHRH--DYGEHNEYLYHEAPTEVS 182
Query: 121 DPQEYQQEPKNQEELKQPRVQSR 144
D QEYQQEP+NQEEL+Q RVQSR
Sbjct: 183 DRQEYQQEPENQEELEQHRVQSR 203
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A5A7V342 | 9.7e-62 | 78.62 | Mediator of RNA polymerase II transcription subunit 12-like isoform X1 OS=Cucumi... | [more] |
| A0A5D3BSG8 | 1.4e-60 | 77.99 | GATA zinc finger domain-containing protein 10-like isoform X2 OS=Cucumis melo va... | [more] |
| A0A5D3CXX3 | 3.1e-60 | 79.74 | GATA zinc finger domain-containing protein 10-like isoform X2 OS=Cucumis melo va... | [more] |
| A0A5D3DJV7 | 4.1e-60 | 77.36 | Serine/threonine-protein phosphatase 7 long form-like protein OS=Cucumis melo va... | [more] |
| A0A5A7SLF8 | 1.8e-52 | 76.22 | Mediator of RNA polymerase II transcription subunit 12-like isoform X1 OS=Cucumi... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| KAA0062642.1 | 2.0e-61 | 78.62 | mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis ... | [more] |
| TYK01176.1 | 2.9e-60 | 77.99 | GATA zinc finger domain-containing protein 10-like isoform X2 [Cucumis melo var.... | [more] |
| KAA0049532.1 | 6.4e-60 | 79.74 | GATA zinc finger domain-containing protein 10-like isoform X2 [Cucumis melo var.... | [more] |
| TYK23842.1 | 8.4e-60 | 77.36 | serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var.... | [more] |
| KAA0025972.1 | 3.8e-52 | 76.22 | mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis ... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
