PI0019772 (gene) Melon (PI 482460) v1

Overview
NamePI0019772
Typegene
OrganismCucumis metuliferus (Melon (PI 482460) v1)
DescriptionUnknown protein
Locationchr03: 5177588 .. 5183441 (-)
RNA-Seq ExpressionPI0019772
SyntenyPI0019772
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCGAGGATTTAACAACATTCAATTTTCTAGAGATTCAAATGCACATCTGCTCGGATTCACGTTGCTCAACATGGTAACAAGATGATCACCTGGGTTTTCATTTACTTGCACTTGAAATTCTCCATTCTCCGTTCCCACATTTTTCAATTGTGTATTGTAAATTAAACACAATACAAAGTCATTTACAGAGTGCTTTTCTTATTTTCATGAAAGGAACTCGATTAATTTATTCCCCACGATGGAATTTAGGGGGGAAAAGAAAAAGAATATCTATTTCAGACTTTCAGTGGCCTATTATAATTCATTTGGTGGTCTGCATCTTCTTTACAGCTTATATCTCGTAATTATGAAGTTACAGTGAAAACGATCAAGTGTTTCCAAACTAGTCATGTTTATAAGCATAGGGATGTTTCATCTGGGGTTACATGCTCTGAAAACCGACACTAAAATTCTTAATTATTATTGTCTGAGGAGGAATATCTTTCTCTTCTTTTCTAGTTCTTGGGGAAGTAAAATAAAATCATTATTTCTGATGATTATTGAAAAGCAAAGTGTGCTTTGCTTAAAGGGCTTTAGGGAGCTGTTTGCGATCAGGCGTTTGCCAGAATTTGTTTCTGAATGGCTGGCCTCTATTACAATACAATACAATACAGTACAGCGAAGCCTGGTTAGTTTATTTCCTTCCTTTCCCACCCTCTGTTTATTTATATATCTGTTGCGTTGCATTTTGCTTACTCTTTTTGGAACCCTTTAATTTAGGCTATGCATGAAATTCCTGCAAGAGACAAAAAGCATGAGAGACAGTTGCGACCTACAAAGTGAGCAATTCAAAGCTTTCTTTTTTTCCAATTCTTATGTTATATGTTTATATTTGTGTTTCCTTCAAAACCCATTTAGAAAAATCAGCGAAAGAATAAACCAAAATTAGTAGAGAGAGAAAGTCAGGAGATGTCAGGAAGAAGGGATGTGAAAGGGGAACTTTCATCATCAGTCTCCATAGCTTTCAAAGAGAACCGAATCAGACAAAAGCTTGGGGTTAAGAAAAGGATGTTGCTTTTGGGGGAAAAATATAATATAATATTTTTACAAAAATAAAAAAAAGAAACCAGGAATCTCACTGTATACATTGCTTTTTACAGCCCTCTAAGCCCCCACTTTTCATCATTCTTTCACCGCTAGAATGATTAGTCATATTTACTATCCCAACTAAAAGTCTTAAAAGACACCCTCTCTGCCTGAACTGAACTGGAGAGAGAGGGACATCACTTCTACTAGAAAACCTAACGCCCAAAAAGAAGATAGAAATTTTTGGATGTTTCCCCCTCTTCCTCTTCTATTGGAATATTGACCCATCCTTCTCTCTCTCTTTGAAAACTACAAAGAAGCTTCTTCCTTTCTATTCCATTCCTTTTGTTCACTCAACTTTCGTTTTCTTCTTTTCTGTACAAATTTGAGTATATATATCTATATGTATAATGTATTTTCATGGGTCAGTCTTATTGGACTTGGGTGTTACATTACATGTTGAGATGAATCAACTCATTTGACTTTCTTTTCCGTTTTTTGTAATCTTTTTGACTTGTCAGCTAGTCAAAACTTTCAATTCAAATAAACAATAAAAAATATTGTTTATATTGTGGCAAATTTGTTTTTACTGTTTACCAATTCATTTTATATTCTCATTACTTGACCTTAACGCTTGATTAGATATTTCGGCAATAAAAAGAATAAGAATAGATTTGATAATACTTTTTAGTATTAATTAATATATGGGTTTCTCATCTATTTTTTCTTTTGTCCCTTTATTTACCTGTTGATTGTTTTTACTTTTTTGAGGATTAAAGAAAAATCTGGAAACGAGAAGCAGGGAAGGGTTAAAAGGTACAACAACTCCATCAATTGATTCTTCTACTTGTTTTTTTTTCCTTTTTCTTTTTCTTTTTCTTTTTTTTTTAAGATTTTTTTTTTCTTTTGGCCTTTGAACCATAACAACTACAATATTTTCCCATCTCTGTCTACCTGTGGCTACAAAAGTCCAAAAGCTTCTTCCTGCCTTCAACGATTTCATCAATGAAATCATCAAGTTGGCAAACAATATTCTCAGCTCCAGATCTCAGTACCCCAAAACAAGCTCTCAAATTTTCAACCCTTTCTCTAATTCCAATCTCTGTTTCCCATTCCACCACTCCCTGTGACCCCATCCCCACCCTTCTCTCCAATTCCGCCCTCAATTCCTCCATCGCCATCTTCGACCTTCTAAACTCGTACAGCAAAATCCCAGGCCTTCCGTTCATCTGGTTGATCTCTCCGGCGACTCTCTCCTGCAATCTCGCCGTCGAAATCATAAAAGCTGAACCGAAAAACAGACATCCTTCATACCCTCCTCTTACAAAATTCGATTCCGGCCAACAGTAAACCAGCCCGTAGAGCAAGATCATTAGGAGGAGTGAGCTCACATTTCTCATTGCGTACAGAACTCCCCTGAATCCATTGAATCCGTTCAGCTTTGATTCGATCGATACTTTCTCATCGAACCTCAGAGATAAAGGTTGAATTCTTGCTTCCATCAGTGCTCGATTCTCCTCCTCCAATCCCACCGCTTCCCTTCGACACCCTGATATTGCCCTAATCACCTGTATTTCAAGAGTTGGAGAACTTTTAGATGATGAACCCAATGCTTCCAAACAAAACAGAACCGAACAGAACAAAACAAAAACAATAAAAACAAAATACACGAGCAAAATTTAGATTGAGATTATGATTTTTGAGATGGACCTGGCGAGAAAGTTGTGGACTCAGATGGCGATGAGTTTCAAGAGAGGAAGTGATATTGAAGCCAGCAGAGTAGAAATTTTCAATTCCAGAAATGCCTGACTTGAGGACATGACAGGCGTCCCAAAGCTTAGAACTTTCATCCATGTACTCATCCAACCACTTCTCCCCCACCGGCAAATGAAGCTTTTGGACAAGAAGTGTCAATTGGGAATGAAATGATCGGAGAAGTGAAAGAACCCTTTGAAGGAATTGGATTGACATGAAATTGTTTGAAAGGTAAACCCGTTCAAGATCATCGATCCCTCGAGTCAGAAAAGTATAGAAGCCATTGACAGAGTTGGTGGAGGAGGGATCCATTGTGACCTTGTGGGAACTAAAAGGAAAAGGCAGAGAGAGAGAGAGAAAGAGAAAGAGAGAGAGAGAGAGAAAGAGAGAGAATTTTGGAGGGGGGGGGGGGGGGTAGAAGTAGAAGAGGGAGAGAAAAGGTTATTAAGAAGGCTGGTATTTAAATTGAAGAAGCATTGAGAAAATTAAAAGGAAGGGAATGGGAAGAATGGGAATTAGAAACCCAATTCTATATCTTTTTAGAAGCTCAGGTTTCTAAGGTTGAAAAGGATTGTTGGGAGCAATGATGGGTGTTTCCTATAGGGGGGAAAGGATGATTGGTAATATGCCATTTTCATTGTTAAATGGGCAGAAAGAAAGAGAACCCAAAAAATATTCTAAAATTCTCAGATATTAATTAATTTAAAACACTAAGAGAATTTATGCAGAGGAAGAGGAAAATAAATAAATAAATAACCCCCCAAAAAGTGAATAAAGAAGAAAAAAAAATCACCTAAACTAAAGTTTGGGCACATTGGACCACAAATTCCCTATGAACTCCCTTCCAATTTCTTCCTTTTATCCTCTGCCCTCTAAAGTAGCCCTCATTTATTATTTTTTCATACATAAAGTTGAGAAAGATAGAGATAGAGAGAGAGAAAGAGAAAGAGAATGGTTGTGGCATTTAAGTATTGGGAATTCATATATTTAAGAAAGTGAGATTTGAGTTTTTATTGGGTTGGGAAAATGATTTAATCAAGAGGATTCAAACCAGTTTTGATCAGAGTGCTGTTTGGATTCTTGTTTCCCATTCTTTTTTTTTTTTTTCCAATCCCTCGAGCAACTGAATTTTGCTTCTTTAATCTCCAATCTTCCATTCCATTGAAATTTGTGGGTATGATATAGAGAAGGGGAAGGTTTTTCTTATTTATTTATTATTTATTATTTATTATTTTTAATAATCCTAGATTTTCTTAATTTCTTTTATTTTCTTTCATTGATTTTTTCAAAAGAGTGAAGTTGGAATGATGAGGTTCCTTGTATATAATGCATTTTTGCAACTTTCTACTATGCAGAATCATTCTTTTTAGGTTTCAATTTTTTTCATTCTTCATACTTTTTTTATTAAAACAAAATTATTTATTTGTATTGCTCTTTATTCTTTGAGGGACAAAATGGATATGCTCATCTCCCCAAGTTCTCTAGCCCACCCCCTTCCTTCAACTAATGTTTTCTTACATTTTTTATTTTATCCCACACTATAAAGGTGCATTAACCTTCAACTTTTAAATTTGAAATTAAGGATAAATAATAGTAAAATATATATATGTATGTATTGATAACCAAGCTCAAATTCCATTGTTTGATTCTAGTTAAAGAAATTGAGTATTTTTGTTTAAAAAGAAAATATTAAAATTCAAACATTTTTCTATTTATTTTGAATTATATGGTCGAAATTTTATCCTCAATTTGAGAGAGAGAGATCCCCTTCACAAATAAGCCCATAACTTTGGTAGGTCTTAACTGCGACCTATCAACTGCAAATCTACAAATGAAATTTCATGGGTACGATTAGATGGGTCCCAATTATTTGTTCTATCTTCACCCTTATACAAGTCAATTTACTAAATTAAACTGTAGCTATACCAGATTTTATTTTTATGCTTATTTTTACTGTATTGAATTATTCATATAATATTTAAAAATCTTTATTTATCTTGAACTCTTAGTCTTAGGACTGTGGACCTTGTTATCTTAAACTGTATTGGTATTAGGAAAAAAAAAAAAAAAAAAAAAGAAAAGAAAGAAAGAAAGAAAAGAAAAGTGTATATAAAATATTTAATTTTAAGAATGAATTAATAATAAAAGGAGTGGCTGAGTCGAATGCTCGTGGGTTTTTGAAGAATGGGACGTGTGGAGAGTATGTTGGTCTTTTGAGATTTTCATTGGAAAGTGAATTATTATAAATAAAAAGTAGGCAAGGTTGCATTATTTAAGGGTATTGATTTGGGCACCTTCCCTTTCTTTTCTCCTTATGCTGCACCTCCTCTCCAACATTTACTTCATAACCTCCCTTACTGTCCTTTTCAAATTTTATTAAGATTTCATCAGCATTCTTACCCATAACACTATTTTTATGGTAATTGTGAACTTTGATATATTCCTGGAACAATTGTTTTACGTGAGGATTACAACTATCATGGGTTTGCCTAGTGATAAATATGGTGCATGATCTTGATGAGATCATGAGTTCAATTCATGATAGTCATCTACCTAGAATTTAATGTCCAATGAGTTTTTTTTACAATGGTCGGGAGGATTGTCTCATTGAATTATATTCTAATATGCTAAATTATAACACAACACATGGTAACACCCTCCAAACTTTAGGTGGTATAGTGAAGATCAACATGAGTTTGTGAACATGAGTTTGTGAAGCAACTAAGAGAAGCAATCAAATGATAAAGATAAAGCTTTTGTGGAAGGTATATGTTGGTTGTTCTATACCGAAGGATGAATCCTACAAAAATAAGAAGAAAATTGAAGCTCATAACCAAGAGTGCATTTTATATAATGAAGAATGCGAAGTACAATGGTAAAGTGGATGGTTCATGAAGTGGCCATGAGCAGACTAATAACATGAACAATGTAGGCAAGTATCTGGCGAGTCACAATCAAATAAATAAGGTTACCAACAAGTTTTTAGTGTGGATGAAAAGTATCGAGTGATGGTTTTATACTTTTAGAGAGCG

mRNA sequence

ATGCGAGGATTTAACAACATTCAATTTTCTAGAGATTCAAATGCACATCTGCTCGGATTCACGTTGCTCAACATGGGCTTTAGGGAGCTGTTTGCGATCAGGCGTTTGCCAGAATTTGTTTCTGAATGGCTGGCCTCTATTACAATACAATACAATACAGTACAGCGAAGCCTGGCTATGCATGAAATTCCTGCAAGAGACAAAAAGCATGAGAGACAGTTGCGACCTACAAAGTGGTATAGTGAAGATCAACATGAGTTTGTGAACATGAGTTTGTGAAGCAACTAAGAGAAGCAATCAAATGATAAAGATAAAGCTTTTGTGGAAGGTATATGTTGGTTGTTCTATACCGAAGGATGAATCCTACAAAAATAAGAAGAAAATTGAAGCTCATAACCAAGAGTGCATTTTATATAATGAAGAATGCGAAGTACAATGGTAAAGTGGATGGTTCATGAAGTGGCCATGAGCAGACTAATAACATGAACAATGTAGGCAAGTATCTGGCGAGTCACAATCAAATAAATAAGGTTACCAACAAGTTTTTAGTGTGGATGAAAAGTATCGAGTGATGGTTTTATACTTTTAGAGAGCG

Coding sequence (CDS)

ATGCGAGGATTTAACAACATTCAATTTTCTAGAGATTCAAATGCACATCTGCTCGGATTCACGTTGCTCAACATGGGCTTTAGGGAGCTGTTTGCGATCAGGCGTTTGCCAGAATTTGTTTCTGAATGGCTGGCCTCTATTACAATACAATACAATACAGTACAGCGAAGCCTGGCTATGCATGAAATTCCTGCAAGAGACAAAAAGCATGAGAGACAGTTGCGACCTACAAAGTGGTATAGTGAAGATCAACATGAGTTTGTGAACATGAGTTTGTGA

Protein sequence

MRGFNNIQFSRDSNAHLLGFTLLNMGFRELFAIRRLPEFVSEWLASITIQYNTVQRSLAMHEIPARDKKHERQLRPTKWYSEDQHEFVNMSL
Homology
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BLAST of PI0019772 vs. NCBI nr
Match: KAG7029608.1 (hypothetical protein SDJN02_07948, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 60.5 bits (145), Expect = 9.0e-06
Identity = 29/35 (82.86%), Postives = 34/35 (97.14%), Query Frame = 0 

Query: 44  LASITIQYNTVQRSLAMHEIPARDKKHERQLRPTK 79
           LASITIQY+TVQRSLAMHE+PARDKKHE+QL+ +K
Sbjct: 77  LASITIQYSTVQRSLAMHEMPARDKKHEKQLQLSK 111

The following BLAST results are available for this feature:
BLAST of PI0019772 vs.
Match NameE-valueIdentityDescription
BLAST of PI0019772 vs.
Match NameE-valueIdentityDescription
BLAST of PI0019772 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG7029608.19.0e-0682.86hypothetical protein SDJN02_07948, partial [Cucurbita argyrosperma subsp. argyro... [more]
BLAST of PI0019772 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
PI0019772.1PI0019772.1mRNA