PI0019655 (gene) Melon (PI 482460) v1

Overview


Name	PI0019655
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	NBS-LRR type resistance protein
Location	chr06: 17197938 .. 17200366 (+)
RNA-Seq Expression	PI0019655
Synteny	PI0019655

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCAGAAAGGCGAAGACAGAAAAAGTAGGCGAGCTACATTGCAATTAGGCGTTCAAAAGAGCATCTGGCGAATAACCAGTACAACACTATGCGATGCTGACTCGATAAAAGACAAGAATGGTAGTTCGAGATTATGTGACCTATCTTCAATGATTTCGGTGCGAGAAAGACACTATACAGAAGAGCATTAAATGCTTCCTGCCAAGAGCATACTTATAAATACTCCCAACTCCAAGTGTATAGTATCAAGAGGAGACCATCACTAGGATGGCCGGGGTAGAACGCCTATTAGAGTTTTTCCCATTTGCAGCATCAATCCTCCACCCTTTTTCCAATCATCAATCCGACAAGAGCTCAAGAGAAAAGATTAGAGAGAAAGAATTTCCCATACACTATCCGCCTAACTTGTAAAAGAGCCAAAGAATGCAAGTAATTGCATTCTGCGGCTTGACACATCCCTTTTCCTATTCATTTTATGTATTTTGTTGTATTGTATAAAAATATGTATGTCATGGCCGCAAGGCCTACAGTCTTAATACAATACAGTTCATCCACTTCCAGTCTACCATCTCTATACTTTCAAATTGCATGTTTTACATTTTAAGTAGTTGAATTGTATATCGCGTGTTTGATAAGGAATTCCCTTATAACTGTCATCATGCTTAGGCGAGCTAATTCGCTTGGCCAGCGTTGGTCGTCAACTACTCGAGAGAGTAAGTAGCAAGGACATAACTAAGCATGCGTGGAATGAAGTTTGGAAACAAACTTCATTCTGACGTTTTAACTCTATCATTTGCATTCCTAGAGGAAGTAAGTGTGGCATTAGGAGCCGAAAGGATGACCGCCTTAATTAGAGAGTTAAGTATGACGTTTATAATCAGGAACGTCTAGGTAAGAAAGTAGAATTATCTTAATCATTTGCGTCCCAAACGACAAGCAAGTGTGGCGTTTGGTACCGAGAGGTGCTCGCCTTAATTATGAGATCATCTCCATAATCTTATCGCATTGAACATTAACCATATATGTAGATCGCCTAATGTGTAGCATGTTCCTTCTCATTCTCACACAAGTTAGATCGCATATTCATAACCCATTCCCCTACAAATATCTCTTTGTAAATAAGTAGTTTAGGGTCTCATATAAGTTTACGTTGCTTTATACATTTGATCTACACCGCCTGGTAAGCACATATTTCACTTAGCTCCTTTGATAGACATTCCCTAAGTTTGACCCTGGCCTTGCTAGAAAACCTCTTGCTCTGCTTATACTTGGGCGAGAAAGAGGAAAACTTGTACGTTAAATGACATATTATTAGATTCAGCAACGCGTAAGTAGGAATAACCTCATCGCATAACCATAGTCCTACAACCTAATAAGTTATCATTTCACCATCGCATGAACTTAACATTCATGTAACGACCCGACTCTCTAAAGTACAAGATTGCTACTGAGACTCTAGTGAAAATAAGGATTTGAAGAACTTCAAGGCTTTCCCAAAAGAAATATCATTTAAATAATTTTATAACATTTAAAGCAGAAGACAAAGTGTGGGCCCCAGTTTCAAATACAAAATACCACTGTAATAAACGTCATTCAAATCTAGTGTAGTTAAGAAGTTTTAAGCGTAAAATAAATACATCATATGACAAAAGAACCGACATGACTGATAGCGGAAGCAACGATTACGCCTATGACCATCACGTGTCCTTCCTGCCTCTCGCCGGTCTGCCGCCCATCTTAACTTTGCCTGTAAAAGTTAAACATGAAAAGGGTGAGTATACACATATACTCAGTAAGGGGGAAACTACAATCAAGCTAAGGTTGAACAGTTATCTTCCTATGGGTATCCTGCAGCAATATCAGTCTAGGAATCCCGAAGGAGTTCCACAATATAGTCTGGCGGCTCGAAAGCTCACTTAATCAGTCTGGTGGTTCCGAAGAAAGCACCCATCAGTCTGGTGATTCCGAAGAAAGCACCCATCAGTCTGGTGATCCCGAAGGAAACACCCATCAGTCTGGTGATCCCGAAGGAAACACCCATCAGTCTGGTGATCCCGAAGGAAACACCCATCAGTCTGGTGATCCCGAAAGAAACACCCATCAGTCTGGTGATCCCGAAGGAAGCACCCATCAGTCTGGTGATCCCGAAGAAAGCACCCATCAGTCTGGTGATCCCGAAGGAAGCACCCATCAGTCTGGTGATCCCGAAGGAAACACCCACAGTCTGGTGATCCCGAAGGAAACACCTATCAGTCTGGTGATCCCAAAGGAAACAAATCAGTCTGGTGATCCCAAAGGAAGCACCCATCAGTCTGGTGATCCCGAAGGAAACACCGATCAGTCTAGTGATCCCAAAGAAAACACCTATCAGTCTGGTGATCCCAAAGGAAACACCTATCAGTCTGGTGATCCCGAAGGAAACACCTAA

mRNA sequence

ATGCAGAAAGGCGAAGACAGAAAAAGTAGGCGAGCTACATTGCAATTAGGCGTTCAAAAGAGCATCTGGCGAATAACCAGTACAACACTATGCGATGCTGACTCGATAAAAGACAAGAATGGTAGTTCGAGATTATGTGACCTATCTTCAATGATTTCGCATCAATCCTCCACCCTTTTTCCAATCATCAATCCGACAAGAGCTCAAGAGAAAAGATTAGAGAGAAAGAATTTCCCATACACTATCCGCCTAACTTGTAAAAGAGCCAAAGAATGCAAAAACACCCATCAGTCTGGTGATCCCGAAGGAAGCACCCATCAGTCTGGTGATCCCGAAGAAAGCACCCATCAGTCTGGTGATCCCGAAGGAAGCACCCATCAGTCTGGTGATCCCGAAGGAAACACCCACAGTCTGGTGATCCCGAAGGAAACACCTATCAGTCTGGTGATCCCAAAGGAAACAAATCAGTCTGGTGATCCCAAAGGAAGCACCCATCAGTCTGGTGATCCCGAAGGAAACACCGATCAGTCTAGTGATCCCAAAGAAAACACCTATCAGTCTGGTGATCCCAAAGGAAACACCTATCAGTCTGGTGATCCCGAAGGAAACACCTAA

Coding sequence (CDS)

ATGCAGAAAGGCGAAGACAGAAAAAGTAGGCGAGCTACATTGCAATTAGGCGTTCAAAAGAGCATCTGGCGAATAACCAGTACAACACTATGCGATGCTGACTCGATAAAAGACAAGAATGGTAGTTCGAGATTATGTGACCTATCTTCAATGATTTCGCATCAATCCTCCACCCTTTTTCCAATCATCAATCCGACAAGAGCTCAAGAGAAAAGATTAGAGAGAAAGAATTTCCCATACACTATCCGCCTAACTTGTAAAAGAGCCAAAGAATGCAAAAACACCCATCAGTCTGGTGATCCCGAAGGAAGCACCCATCAGTCTGGTGATCCCGAAGAAAGCACCCATCAGTCTGGTGATCCCGAAGGAAGCACCCATCAGTCTGGTGATCCCGAAGGAAACACCCACAGTCTGGTGATCCCGAAGGAAACACCTATCAGTCTGGTGATCCCAAAGGAAACAAATCAGTCTGGTGATCCCAAAGGAAGCACCCATCAGTCTGGTGATCCCGAAGGAAACACCGATCAGTCTAGTGATCCCAAAGAAAACACCTATCAGTCTGGTGATCCCAAAGGAAACACCTATCAGTCTGGTGATCCCGAAGGAAACACCTAA

Protein sequence

MQKGEDRKSRRATLQLGVQKSIWRITSTTLCDADSIKDKNGSSRLCDLSSMISHQSSTLFPIINPTRAQEKRLERKNFPYTIRLTCKRAKECKNTHQSGDPEGSTHQSGDPEESTHQSGDPEGSTHQSGDPEGNTHSLVIPKETPISLVIPKETNQSGDPKGSTHQSGDPEGNTDQSSDPKENTYQSGDPKGNTYQSGDPEGNT

Homology

[Close]

BLAST of PI0019655 vs. ExPASy TrEMBL
Match: A0A5D3CSH9 (Foot protein 1 variant 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1779G00090 PE=4 SV=1)

HSP 1 Score: 97.1 bits (240), Expect = 9.3e-17
Identity = 64/111 (57.66%), Postives = 75/111 (67.57%), Query Frame = 0


Query: 95  THQSGDPEGSTHQSGDPEESTHQSGDPEGSTHQSGDPEGNTHSLVIPKETPISLVIPKET 154
           T+QS DPEG T+QS DPE ST+QS DPEG T+QS DPEG T     P+        P+  
Sbjct: 40  TYQSRDPEGCTYQSSDPEGSTYQSSDPEGCTYQSRDPEGYTLQSREPEGYTYQFRDPEGY 99

Query: 155 N-QSGDPKGSTHQSGDPEGNTDQSSDPKENTYQSGDPKGNTYQSGDPEGNT 205
             QS DP+G T+QS DPEG T QS DP+  TYQS DP+G+TYQS DPEG T
Sbjct: 100 KYQSRDPEGCTYQSSDPEGCTYQSRDPEGCTYQSSDPEGSTYQSSDPEGCT 150

[Close]

BLAST of PI0019655 vs. ExPASy TrEMBL
Match: A0A5A7T025 (Mucin-3A-like isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold20G001740 PE=4 SV=1)

HSP 1 Score: 96.7 bits (239), Expect = 1.2e-16
Identity = 61/109 (55.96%), Postives = 71/109 (65.14%), Query Frame = 0


Query: 96  HQSGDPEGSTHQSGDPEESTHQSGDPEGSTHQSGDPEGNTHSLVIPKETPISLVIPKETN 155
           +QS DPEG T+QS DPE  T+QS DPEG T+QS DPEG     +     P   + P    
Sbjct: 50  YQSSDPEGCTYQSSDPEGCTYQSSDPEGCTYQSSDPEG----CIYQSSDPEGCIYP---- 109

Query: 156 QSGDPKGSTHQSGDPEGNTDQSSDPKENTYQSGDPKGNTYQSGDPEGNT 205
            S DP+G T+QS DPEG TDQSSDP+  TYQ  DP+G TYQS DPEG T
Sbjct: 110 -SSDPEGCTYQSSDPEGCTDQSSDPEGCTYQYSDPEGCTYQSSDPEGYT 149

[Close]

BLAST of PI0019655 vs. ExPASy TrEMBL
Match: A0A5A7UPP1 (NBS-LRR type resistance protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold221G001030 PE=4 SV=1)

HSP 1 Score: 96.3 bits (238), Expect = 1.6e-16
Identity = 63/112 (56.25%), Postives = 72/112 (64.29%), Query Frame = 0


Query: 93  KNTHQSGDPEGSTHQSGDPEESTHQSGDPEGSTHQSGDPEGNTHSLVIPKETPISLVIPK 152
           + THQS DPEG T+QS DPE  T+QS DPEG T+Q  DPEG T+    P+          
Sbjct: 53  ERTHQSRDPEGCTYQSSDPEGYTYQSSDPEGCTYQCSDPEGCTYQSSDPEGC-------- 112

Query: 153 ETNQSGDPKGSTHQSGDPEGNTDQSSDPKENTYQSGDPKGNTYQSGDPEGNT 205
              QS DP+G T+QS DPEG T QSSDP+  TYQS DPKG TYQ  DPEG T
Sbjct: 113 -IYQSSDPEGYTYQSSDPEGYTYQSSDPEGCTYQSSDPKGCTYQFSDPEGYT 155

[Close]

BLAST of PI0019655 vs. ExPASy TrEMBL
Match: A0A5D3BBI9 (NBS-LRR type resistance protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold282G00300 PE=4 SV=1)

HSP 1 Score: 96.3 bits (238), Expect = 1.6e-16
Identity = 63/112 (56.25%), Postives = 72/112 (64.29%), Query Frame = 0


Query: 93  KNTHQSGDPEGSTHQSGDPEESTHQSGDPEGSTHQSGDPEGNTHSLVIPKETPISLVIPK 152
           + THQS DPEG T+QS DPE  T+QS DPEG T+Q  DPEG T+    P+          
Sbjct: 53  ERTHQSRDPEGCTYQSSDPEGYTYQSSDPEGCTYQCSDPEGCTYQSSDPEGC-------- 112

Query: 153 ETNQSGDPKGSTHQSGDPEGNTDQSSDPKENTYQSGDPKGNTYQSGDPEGNT 205
              QS DP+G T+QS DPEG T QSSDP+  TYQS DPKG TYQ  DPEG T
Sbjct: 113 -IYQSSDPEGYTYQSSDPEGYTYQSSDPEGCTYQSSDPKGCTYQFSDPEGYT 155

[Close]

BLAST of PI0019655 vs. ExPASy TrEMBL
Match: A0A5A7T115 (NBS-LRR type resistance protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold191G00990 PE=4 SV=1)

HSP 1 Score: 95.5 bits (236), Expect = 2.7e-16
Identity = 65/126 (51.59%), Postives = 76/126 (60.32%), Query Frame = 0


Query: 79  PYTIRLTCKRAKECKNTHQSGDPEGSTHQSGDPEESTHQSGDPEGSTHQSGDPEGNTHSL 138
           P  + L  K  K  + THQS DPEG T+QS DPE  T+QS DPEG T+QS DP+G T+  
Sbjct: 2   PLAVPLPEKLKKRKERTHQSRDPEGCTYQSSDPEGYTYQSSDPEGCTYQSSDPKGCTY-- 61

Query: 139 VIPKETPISLVIPKETNQSGDPKGSTHQSGDPEGNTDQSSDPKENTYQSGDPKGNTYQSG 198
                            QS DP+G T+QS DPEG T QSSDP+  TYQS D +G TYQS 
Sbjct: 62  -----------------QSSDPEGCTYQSSDPEGCTYQSSDPEGCTYQSSDLEGCTYQSS 108

Query: 199 DPEGNT 205
           DPEG T
Sbjct: 122 DPEGYT 108

[Close]

BLAST of PI0019655 vs. NCBI nr
Match: TYK14897.1 (foot protein 1 variant 1-like [Cucumis melo var. makuwa])

HSP 1 Score: 97.1 bits (240), Expect = 1.9e-16
Identity = 64/111 (57.66%), Postives = 75/111 (67.57%), Query Frame = 0


Query: 95  THQSGDPEGSTHQSGDPEESTHQSGDPEGSTHQSGDPEGNTHSLVIPKETPISLVIPKET 154
           T+QS DPEG T+QS DPE ST+QS DPEG T+QS DPEG T     P+        P+  
Sbjct: 40  TYQSRDPEGCTYQSSDPEGSTYQSSDPEGCTYQSRDPEGYTLQSREPEGYTYQFRDPEGY 99

Query: 155 N-QSGDPKGSTHQSGDPEGNTDQSSDPKENTYQSGDPKGNTYQSGDPEGNT 205
             QS DP+G T+QS DPEG T QS DP+  TYQS DP+G+TYQS DPEG T
Sbjct: 100 KYQSRDPEGCTYQSSDPEGCTYQSRDPEGCTYQSSDPEGSTYQSSDPEGCT 150

[Close]

BLAST of PI0019655 vs. NCBI nr
Match: KAA0036864.1 (mucin-3A-like isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 96.7 bits (239), Expect = 2.5e-16
Identity = 61/109 (55.96%), Postives = 71/109 (65.14%), Query Frame = 0


Query: 96  HQSGDPEGSTHQSGDPEESTHQSGDPEGSTHQSGDPEGNTHSLVIPKETPISLVIPKETN 155
           +QS DPEG T+QS DPE  T+QS DPEG T+QS DPEG     +     P   + P    
Sbjct: 50  YQSSDPEGCTYQSSDPEGCTYQSSDPEGCTYQSSDPEG----CIYQSSDPEGCIYP---- 109

Query: 156 QSGDPKGSTHQSGDPEGNTDQSSDPKENTYQSGDPKGNTYQSGDPEGNT 205
            S DP+G T+QS DPEG TDQSSDP+  TYQ  DP+G TYQS DPEG T
Sbjct: 110 -SSDPEGCTYQSSDPEGCTDQSSDPEGCTYQYSDPEGCTYQSSDPEGYT 149

[Close]

BLAST of PI0019655 vs. NCBI nr
Match: TYJ95728.1 (NBS-LRR type resistance protein [Cucumis melo var. makuwa])

HSP 1 Score: 96.3 bits (238), Expect = 3.3e-16
Identity = 63/112 (56.25%), Postives = 72/112 (64.29%), Query Frame = 0


Query: 93  KNTHQSGDPEGSTHQSGDPEESTHQSGDPEGSTHQSGDPEGNTHSLVIPKETPISLVIPK 152
           + THQS DPEG T+QS DPE  T+QS DPEG T+Q  DPEG T+    P+          
Sbjct: 53  ERTHQSRDPEGCTYQSSDPEGYTYQSSDPEGCTYQCSDPEGCTYQSSDPEGC-------- 112

Query: 153 ETNQSGDPKGSTHQSGDPEGNTDQSSDPKENTYQSGDPKGNTYQSGDPEGNT 205
              QS DP+G T+QS DPEG T QSSDP+  TYQS DPKG TYQ  DPEG T
Sbjct: 113 -IYQSSDPEGYTYQSSDPEGYTYQSSDPEGCTYQSSDPKGCTYQFSDPEGYT 155

[Close]

BLAST of PI0019655 vs. NCBI nr
Match: KAA0055521.1 (NBS-LRR type resistance protein [Cucumis melo var. makuwa])

HSP 1 Score: 96.3 bits (238), Expect = 3.3e-16
Identity = 63/112 (56.25%), Postives = 72/112 (64.29%), Query Frame = 0


Query: 93  KNTHQSGDPEGSTHQSGDPEESTHQSGDPEGSTHQSGDPEGNTHSLVIPKETPISLVIPK 152
           + THQS DPEG T+QS DPE  T+QS DPEG T+Q  DPEG T+    P+          
Sbjct: 53  ERTHQSRDPEGCTYQSSDPEGYTYQSSDPEGCTYQCSDPEGCTYQSSDPEGC-------- 112

Query: 153 ETNQSGDPKGSTHQSGDPEGNTDQSSDPKENTYQSGDPKGNTYQSGDPEGNT 205
              QS DP+G T+QS DPEG T QSSDP+  TYQS DPKG TYQ  DPEG T
Sbjct: 113 -IYQSSDPEGYTYQSSDPEGYTYQSSDPEGCTYQSSDPKGCTYQFSDPEGYT 155

[Close]

BLAST of PI0019655 vs. NCBI nr
Match: KAA0036583.1 (NBS-LRR type resistance protein [Cucumis melo var. makuwa])

HSP 1 Score: 95.5 bits (236), Expect = 5.6e-16
Identity = 65/126 (51.59%), Postives = 76/126 (60.32%), Query Frame = 0


Query: 79  PYTIRLTCKRAKECKNTHQSGDPEGSTHQSGDPEESTHQSGDPEGSTHQSGDPEGNTHSL 138
           P  + L  K  K  + THQS DPEG T+QS DPE  T+QS DPEG T+QS DP+G T+  
Sbjct: 2   PLAVPLPEKLKKRKERTHQSRDPEGCTYQSSDPEGYTYQSSDPEGCTYQSSDPKGCTY-- 61

Query: 139 VIPKETPISLVIPKETNQSGDPKGSTHQSGDPEGNTDQSSDPKENTYQSGDPKGNTYQSG 198
                            QS DP+G T+QS DPEG T QSSDP+  TYQS D +G TYQS 
Sbjct: 62  -----------------QSSDPEGCTYQSSDPEGCTYQSSDPEGCTYQSSDLEGCTYQSS 108

Query: 199 DPEGNT 205
           DPEG T
Sbjct: 122 DPEGYT 108

The following BLAST results are available for this feature:

BLAST of PI0019655 vs.


Match Name	E-value	Identity	Description

BLAST of PI0019655 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CSH9	9.3e-17	57.66	Foot protein 1 variant 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sc...	[more]
A0A5A7T025	1.2e-16	55.96	Mucin-3A-like isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffol...	[more]
A0A5A7UPP1	1.6e-16	56.25	NBS-LRR type resistance protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_...	[more]
A0A5D3BBI9	1.6e-16	56.25	NBS-LRR type resistance protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_...	[more]
A0A5A7T115	2.7e-16	51.59	NBS-LRR type resistance protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_...	[more]

BLAST of PI0019655 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK14897.1	1.9e-16	57.66	foot protein 1 variant 1-like [Cucumis melo var. makuwa]	[more]
KAA0036864.1	2.5e-16	55.96	mucin-3A-like isoform X2 [Cucumis melo var. makuwa]	[more]
TYJ95728.1	3.3e-16	56.25	NBS-LRR type resistance protein [Cucumis melo var. makuwa]	[more]
KAA0055521.1	3.3e-16	56.25	NBS-LRR type resistance protein [Cucumis melo var. makuwa]	[more]
KAA0036583.1	5.6e-16	51.59	NBS-LRR type resistance protein [Cucumis melo var. makuwa]	[more]

BLAST of PI0019655 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 120..134
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 149..204
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 91..204

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0019655.1	PI0019655.1	mRNA