PI0019639 (gene) Melon (PI 482460) v1

Overview
NamePI0019639
Typegene
OrganismCucumis metuliferus (Melon (PI 482460) v1)
DescriptionUnknown protein
Locationchr02: 20869532 .. 20870359 (-)
RNA-Seq ExpressionPI0019639
SyntenyPI0019639
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAACATTTGTTTGTGTCTTCAAGTCTACCAGCCCCCAGATATAGCCAATATTCCTGTCCCGACTCTTGCTCACAATGTATATTGGTAAGCTTTCGTTATTCACATCCATGCCATGCTCATCTGATCAAATGTTTATACATACATACATACATACATATATATATTTATATATTTCATTTCTGCCTCATATTGTAAATCTAGGTCACATGCACGGCATGGACACCCTTATTAAAAATATACGTTTTTAAGAATGTATATCATTTCATACTAGAAGAAAAATTCAAAGTAAATGGGTTGATGATTTATATGCTTAAAAATTAATTTGATGTATTTCACGCAAAATTTATTATTATAGTCATTTATATGCCATTTTAGTCTACTAAAACAAGTGCTCTATGCATGTCTAAGATATTTCTTGCACTAAGAAGTGTCCAACAAGCATTGAAGTGTCAAAGTGTGTTCTTCTTAGAATATGAGTGACATTTTTTAACACACCTTGCTAGGGTAGGCCATAATGAATAGGGTATATGTCAATGCAAACTGCATACAGCTTGTAACAATCATAAAAATATTAACATTCAGCTAGCTGTAGCTGGAACGTCTGCTCGATCAATACGTTTGGTCCAGTTCATAGGATTTGAGAAGAAAGAAAGAATAGAATAACATAGCAACATTGAGATTAACAGAATATTATTGTTGTTGCCCTAATAATGGCCTTCTTTTTCTTTCTTCTGTTGTCTGTAATGTAGAGGAAACATCAGAGACTGTTTGGTTACTGAGAAAATCCATGGTTTCCTTATAATGCTGCTGCTTGTTGCAAAGTAA

mRNA sequence

ATGAAACATTTGTTTGTGTCTTCAAGTCTACCAGCCCCCAGATATAGCCAATATTCCTGTCCCGACTCTTGCTCACAATGTATATTGGTAAGCTTTCGAAACATCAGAGACTGTTTGGTTACTGAGAAAATCCATGGTTTCCTTATAATGCTGCTGCTTGTTGCAAAGTAA

Coding sequence (CDS)

ATGAAACATTTGTTTGTGTCTTCAAGTCTACCAGCCCCCAGATATAGCCAATATTCCTGTCCCGACTCTTGCTCACAATGTATATTGGTAAGCTTTCGAAACATCAGAGACTGTTTGGTTACTGAGAAAATCCATGGTTTCCTTATAATGCTGCTGCTTGTTGCAAAGTAA

Protein sequence

MKHLFVSSSLPAPRYSQYSCPDSCSQCILVSFRNIRDCLVTEKIHGFLIMLLLVAK
Homology
[Close]
BLAST of PI0019639 vs. ExPASy TrEMBL
Match: A0A0A0LWH1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G257880 PE=4 SV=1)

HSP 1 Score: 86.7 bits (213), Expect = 3.5e-14
Identity = 48/57 (84.21%), Postives = 48/57 (84.21%), Query Frame = 0 

Query: 1  MKHLFVSSSLPAPRYSQYS-CPDSCSQCILVSFRNIRDCLVTEKIHGFLIMLLLVAK 57
          MK LFVSSSLPAPRYSQ S CPDSCSQCIL    NIRDC VTEKIHGFL MLLLVAK
Sbjct: 1  MKQLFVSSSLPAPRYSQCSLCPDSCSQCIL-RRGNIRDCFVTEKIHGFLTMLLLVAK 56

[Close]
BLAST of PI0019639 vs. NCBI nr
Match: KGN65182.1 (hypothetical protein Csa_019553 [Cucumis sativus])

HSP 1 Score: 86.7 bits (213), Expect = 7.1e-14
Identity = 48/57 (84.21%), Postives = 48/57 (84.21%), Query Frame = 0 

Query: 1  MKHLFVSSSLPAPRYSQYS-CPDSCSQCILVSFRNIRDCLVTEKIHGFLIMLLLVAK 57
          MK LFVSSSLPAPRYSQ S CPDSCSQCIL    NIRDC VTEKIHGFL MLLLVAK
Sbjct: 1  MKQLFVSSSLPAPRYSQCSLCPDSCSQCIL-RRGNIRDCFVTEKIHGFLTMLLLVAK 56

The following BLAST results are available for this feature:
BLAST of PI0019639 vs.
Match NameE-valueIdentityDescription
BLAST of PI0019639 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LWH13.5e-1484.21Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G257880 PE=4 SV=1[more]
BLAST of PI0019639 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN65182.17.1e-1484.21hypothetical protein Csa_019553 [Cucumis sativus][more]
BLAST of PI0019639 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
PI0019639.1PI0019639.1mRNA