PI0019576 (gene) Melon (PI 482460) v1

Overview


Name	PI0019576
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	LOB domain-containing protein
Location	chr04: 854127 .. 854726 (-)
RNA-Seq Expression	PI0019576
Synteny	PI0019576

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGTTCCTCTAACTCACAACCCCAAAAGACTTACGGCTCACCATGTGCATCATGTAAGTATCTAAGAAGAAAGTGTGATCCATACTGCATTTTCGCCCCCCATTTTCCAGCAGACCAACCTCAAAAATTCTATGTCGTACATGCGGTTTACGGCGCAAGTAACGTCTCTAAAATTCTTAAGACATTGAGGTATGATGAGCGAGAAGAAGCTGTCAAGTCTCTAGTCTTTGAGGCAGAGGCTCGGCTGAAAGATCCTGTGCACGGTTGCGTTGCCATTATATCAATTCTTCAGGTTAGGCTTCAAAGGCTTCGAACTGAACTCTCCATCGTTCGACAAGAGCTTTCGTCTTACATGTTACCAGAGCTTCCGCCAAACTCGTCTTACATGGTATCTAAGATTCCGTCTTCGTGGAGTCAACGACCAATGATGGAGGGTCAATCATCACGTCAACGGGTTGATGGCTTTGGTACTTCTAATTACGACGGAATAAACACTGATGATGACAGACCATATGTAGTGCTTCAACACCCAACAACGACGGAGCAGTTGCTGCCGGCGACAAAGCAGCCACCGTCTCAAGATAGTACTGATTTTTAG

mRNA sequence

ATGAGTTCCTCTAACTCACAACCCCAAAAGACTTACGGCTCACCATGTGCATCATGTAAGTATCTAAGAAGAAAGTGTGATCCATACTGCATTTTCGCCCCCCATTTTCCAGCAGACCAACCTCAAAAATTCTATGTCGTACATGCGGTTTACGGCGCAAGTAACGTCTCTAAAATTCTTAAGACATTGAGGTATGATGAGCGAGAAGAAGCTGTCAAGTCTCTAGTCTTTGAGGCAGAGGCTCGGCTGAAAGATCCTGTGCACGGTTGCGTTGCCATTATATCAATTCTTCAGGTTAGGCTTCAAAGGCTTCGAACTGAACTCTCCATCGTTCGACAAGAGCTTTCGTCTTACATGTTACCAGAGCTTCCGCCAAACTCGTCTTACATGGTATCTAAGATTCCGTCTTCGTGGAGTCAACGACCAATGATGGAGGGTCAATCATCACGTCAACGGGTTGATGGCTTTGGTACTTCTAATTACGACGGAATAAACACTGATGATGACAGACCATATGTAGTGCTTCAACACCCAACAACGACGGAGCAGTTGCTGCCGGCGACAAAGCAGCCACCGTCTCAAGATAGTACTGATTTTTAG

Coding sequence (CDS)

ATGAGTTCCTCTAACTCACAACCCCAAAAGACTTACGGCTCACCATGTGCATCATGTAAGTATCTAAGAAGAAAGTGTGATCCATACTGCATTTTCGCCCCCCATTTTCCAGCAGACCAACCTCAAAAATTCTATGTCGTACATGCGGTTTACGGCGCAAGTAACGTCTCTAAAATTCTTAAGACATTGAGGTATGATGAGCGAGAAGAAGCTGTCAAGTCTCTAGTCTTTGAGGCAGAGGCTCGGCTGAAAGATCCTGTGCACGGTTGCGTTGCCATTATATCAATTCTTCAGGTTAGGCTTCAAAGGCTTCGAACTGAACTCTCCATCGTTCGACAAGAGCTTTCGTCTTACATGTTACCAGAGCTTCCGCCAAACTCGTCTTACATGGTATCTAAGATTCCGTCTTCGTGGAGTCAACGACCAATGATGGAGGGTCAATCATCACGTCAACGGGTTGATGGCTTTGGTACTTCTAATTACGACGGAATAAACACTGATGATGACAGACCATATGTAGTGCTTCAACACCCAACAACGACGGAGCAGTTGCTGCCGGCGACAAAGCAGCCACCGTCTCAAGATAGTACTGATTTTTAG

Protein sequence

MSSSNSQPQKTYGSPCASCKYLRRKCDPYCIFAPHFPADQPQKFYVVHAVYGASNVSKILKTLRYDEREEAVKSLVFEAEARLKDPVHGCVAIISILQVRLQRLRTELSIVRQELSSYMLPELPPNSSYMVSKIPSSWSQRPMMEGQSSRQRVDGFGTSNYDGINTDDDRPYVVLQHPTTTEQLLPATKQPPSQDSTDF

Homology

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BLAST of PI0019576 vs. ExPASy Swiss-Prot
Match: O04479 (Protein ASYMMETRIC LEAVES 2 OS=Arabidopsis thaliana OX=3702 GN=AS2 PE=1 SV=1)

HSP 1 Score: 137.9 bits (346), Expect = 1.3e-31
Identity = 63/105 (60.00%), Postives = 84/105 (80.00%), Query Frame = 0


Query: 14  SPCASCKYLRRKCDPYCIFAPHFPADQPQKFYVVHAVYGASNVSKILKTLRYDEREEAVK 73
           SPCA+CK+LRRKC P C+FAP+FP DQPQKF  VH V+GASNV+K+L  L   +RE+AV 
Sbjct: 8   SPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPSQREDAVN 67

Query: 74  SLVFEAEARLKDPVHGCVAIISILQVRLQRLRTELSIVRQELSSY 119
           SL +EA+ RL+DPV+GCV +IS+LQ +L++L+ +LS  + ELS Y
Sbjct: 68  SLAYEADMRLRDPVYGCVGVISLLQHQLRQLQIDLSCAKSELSKY 112

[Close]

BLAST of PI0019576 vs. ExPASy Swiss-Prot
Match: Q9FKZ3 (LOB domain-containing protein 36 OS=Arabidopsis thaliana OX=3702 GN=LBD36 PE=2 SV=1)

HSP 1 Score: 137.5 bits (345), Expect = 1.6e-31
Identity = 72/137 (52.55%), Postives = 98/137 (71.53%), Query Frame = 0


Query: 14  SPCASCKYLRRKCDPYCIFAPHFPADQPQKFYVVHAVYGASNVSKILKTLRYDEREEAVK 73
           SPCA+CK+LRRKC   C+FAP+FP DQPQKF  VH V+GASNV+K+L  L  ++RE+AV 
Sbjct: 6   SPCAACKFLRRKCTQECVFAPYFPPDQPQKFAFVHKVFGASNVAKLLNELASNQREDAVN 65

Query: 74  SLVFEAEARLKDPVHGCVAIISILQVRLQRLRTELSIVRQELSSYMLPE--LPPNSSYMV 133
           SL +EAEARL+DPV+GCV +ISILQ RL+++  +L   ++EL++Y+ P+  LP    + +
Sbjct: 66  SLFYEAEARLRDPVYGCVGLISILQHRLKQVNHDLENAKKELATYVGPQAMLPILQPHFM 125

Query: 134 SKIPSSWSQRPMMEGQS 149
           S  P    QRP     S
Sbjct: 126 SLPPQ--PQRPSSSSAS 140

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BLAST of PI0019576 vs. ExPASy Swiss-Prot
Match: A2WXT0 (LOB domain-containing protein 6 OS=Oryza sativa subsp. indica OX=39946 GN=LBD6 PE=3 SV=1)

HSP 1 Score: 136.3 bits (342), Expect = 3.7e-31
Identity = 65/106 (61.32%), Postives = 84/106 (79.25%), Query Frame = 0


Query: 13  GSPCASCKYLRRKCDPYCIFAPHFPADQPQKFYVVHAVYGASNVSKILKTLRYDEREEAV 72
           GSPCA+CK+LRRKC P C+FAP+FP D PQKF  VH V+GASNV+K+L  L   +RE+AV
Sbjct: 36  GSPCAACKFLRRKCQPDCVFAPYFPPDNPQKFVHVHRVFGASNVTKLLNELHPYQREDAV 95

Query: 73  KSLVFEAEARLKDPVHGCVAIISILQVRLQRLRTELSIVRQELSSY 119
            SL +EA+ RL+DPV+GCVAIISILQ  L++L+ +L+  + ELS Y
Sbjct: 96  NSLAYEADMRLRDPVYGCVAIISILQRNLRQLQQDLARAKFELSKY 141

[Close]

BLAST of PI0019576 vs. ExPASy Swiss-Prot
Match: Q8LQH4 (LOB domain-containing protein 6 OS=Oryza sativa subsp. japonica OX=39947 GN=LBD6 PE=2 SV=1)

HSP 1 Score: 136.3 bits (342), Expect = 3.7e-31
Identity = 65/106 (61.32%), Postives = 84/106 (79.25%), Query Frame = 0


Query: 13  GSPCASCKYLRRKCDPYCIFAPHFPADQPQKFYVVHAVYGASNVSKILKTLRYDEREEAV 72
           GSPCA+CK+LRRKC P C+FAP+FP D PQKF  VH V+GASNV+K+L  L   +RE+AV
Sbjct: 36  GSPCAACKFLRRKCQPDCVFAPYFPPDNPQKFVHVHRVFGASNVTKLLNELHPYQREDAV 95

Query: 73  KSLVFEAEARLKDPVHGCVAIISILQVRLQRLRTELSIVRQELSSY 119
            SL +EA+ RL+DPV+GCVAIISILQ  L++L+ +L+  + ELS Y
Sbjct: 96  NSLAYEADMRLRDPVYGCVAIISILQRNLRQLQQDLARAKFELSKY 141

[Close]

BLAST of PI0019576 vs. ExPASy Swiss-Prot
Match: Q32SG3 (LOB domain-containing protein 6 OS=Zea mays OX=4577 GN=LBD6 PE=1 SV=1)

HSP 1 Score: 135.2 bits (339), Expect = 8.2e-31
Identity = 63/106 (59.43%), Postives = 83/106 (78.30%), Query Frame = 0


Query: 13  GSPCASCKYLRRKCDPYCIFAPHFPADQPQKFYVVHAVYGASNVSKILKTLRYDEREEAV 72
           GSPCA+CK+LRRKC P C+FAP+FP D PQKF  VH V+GASNV+K+L  L   +RE+AV
Sbjct: 31  GSPCAACKFLRRKCQPDCVFAPYFPPDNPQKFVHVHRVFGASNVTKLLNELHPFQREDAV 90

Query: 73  KSLVFEAEARLKDPVHGCVAIISILQVRLQRLRTELSIVRQELSSY 119
            SL +EA+ RL+DPV+GCV +ISILQ  L++L+ +L+  + ELS Y
Sbjct: 91  NSLAYEADMRLRDPVYGCVGVISILQHNLRQLQQDLARAKYELSKY 136

[Close]

BLAST of PI0019576 vs. ExPASy TrEMBL
Match: A0A5D3CQL4 (LOB domain-containing protein 12-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G009370 PE=3 SV=1)

HSP 1 Score: 297.7 bits (761), Expect = 3.5e-77
Identity = 164/240 (68.33%), Postives = 176/240 (73.33%), Query Frame = 0


Query: 1   MSSSNSQPQKTYGSPCASCKYLRRKCDPYCIFAPHFPADQPQKFYVVHAVYGASNVSKIL 60
           MSS NSQPQKTYGSPCASCK+LRRKCD  CIFAPHFPADQP+KF VVH +YGASNVSKIL
Sbjct: 1   MSSFNSQPQKTYGSPCASCKFLRRKCDADCIFAPHFPADQPKKFEVVHRIYGASNVSKIL 60

Query: 61  KTLRYDEREEAVKSLVFEAEARLKDPVHGCVAIISILQVRLQRLRTELSIVRQELSSYML 120
           K LRYDEREE V SLVFEAEARL+DPV GCVA+IS LQ RLQ L+TELSI R+ELSSYM 
Sbjct: 61  KALRYDEREETVNSLVFEAEARLRDPVRGCVALISDLQDRLQMLQTELSIARRELSSYMP 120

Query: 121 PELPPN-SSYMVSKIPSSW---------------------------------------SQ 180
            ELPPN SSYM SK+P +W                                       SQ
Sbjct: 121 SELPPNYSSYMASKLPPNWSCMASKLRPNSSYMASKLRPNSSYMISELLPKWPGESSTSQ 180

Query: 181 RPMMEGQSSRQRVDGFGTSNYDGINTDDDRPYVVLQHP-TTTEQLLPATKQPPSQDSTDF 200
           RPMMEGQSS QRVDGFGT+NY GIN DDDR +VV QHP TTTEQLLPAT+QPPSQDS DF
Sbjct: 181 RPMMEGQSSSQRVDGFGTTNYYGINNDDDRRHVVFQHPVTTTEQLLPATEQPPSQDSIDF 240

[Close]

BLAST of PI0019576 vs. ExPASy TrEMBL
Match: A0A1S3AYN9 (LOB domain-containing protein 12-like OS=Cucumis melo OX=3656 GN=LOC103484334 PE=3 SV=1)

HSP 1 Score: 297.7 bits (761), Expect = 3.5e-77
Identity = 164/240 (68.33%), Postives = 176/240 (73.33%), Query Frame = 0


Query: 1   MSSSNSQPQKTYGSPCASCKYLRRKCDPYCIFAPHFPADQPQKFYVVHAVYGASNVSKIL 60
           MSS NSQPQKTYGSPCASCK+LRRKCD  CIFAPHFPADQP+KF VVH +YGASNVSKIL
Sbjct: 1   MSSFNSQPQKTYGSPCASCKFLRRKCDADCIFAPHFPADQPKKFEVVHRIYGASNVSKIL 60

Query: 61  KTLRYDEREEAVKSLVFEAEARLKDPVHGCVAIISILQVRLQRLRTELSIVRQELSSYML 120
           K LRYDEREE V SLVFEAEARL+DPV GCVA+IS LQ RLQ L+TELSI R+ELSSYM 
Sbjct: 61  KALRYDEREETVNSLVFEAEARLRDPVRGCVALISDLQDRLQMLQTELSIARRELSSYMP 120

Query: 121 PELPPN-SSYMVSKIPSSW---------------------------------------SQ 180
            ELPPN SSYM SK+P +W                                       SQ
Sbjct: 121 SELPPNYSSYMASKLPPNWSYMASKLRPNSSYMASKLRPNLSYMISELLPKWPGESSTSQ 180

Query: 181 RPMMEGQSSRQRVDGFGTSNYDGINTDDDRPYVVLQHP-TTTEQLLPATKQPPSQDSTDF 200
           RPMMEGQSS QRVDGFGT+NY GIN DDDR +VV QHP TTTEQLLPAT+QPPSQDS DF
Sbjct: 181 RPMMEGQSSSQRVDGFGTTNYYGINNDDDRRHVVFQHPVTTTEQLLPATEQPPSQDSIDF 240

[Close]

BLAST of PI0019576 vs. ExPASy TrEMBL
Match: A0A0A0KIS2 (LOB domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G525240 PE=3 SV=1)

HSP 1 Score: 296.6 bits (758), Expect = 7.8e-77
Identity = 155/216 (71.76%), Postives = 176/216 (81.48%), Query Frame = 0


Query: 1   MSSSNSQPQKTYGSPCASCKYLRRKCDPYCIFAPHFPADQPQKFYVVHAVYGASNVSKIL 60
           MSSSNSQ QK YGSPCASCK+LRRKCD  CIFAP+FPADQPQKF VVH +YGASNVSKIL
Sbjct: 1   MSSSNSQSQKIYGSPCASCKFLRRKCDVDCIFAPYFPADQPQKFEVVHRIYGASNVSKIL 60

Query: 61  KTLRYDEREEAVKSLVFEAEARLKDPVHGCVAIISILQVRLQRLRTELSIVRQELSSYML 120
           K  RYDEREE VKSLVFEAEARL+DPVHGCVA I+ LQ RLQRL+TEL+IV+Q+L SYM 
Sbjct: 61  KASRYDEREETVKSLVFEAEARLEDPVHGCVAFIAGLQQRLQRLQTELAIVQQQLLSYMA 120

Query: 121 PELPPNSSYMVSKIP-----------------SSWSQRPMMEGQSSRQRVDGFGTSNYDG 180
            +LPPNSSYM S++P                 SS SQ+PMME QSS +RVDG+GT+NY G
Sbjct: 121 SQLPPNSSYMASELPPNSSYMLSELLPKWPRESSLSQQPMMEDQSSCRRVDGYGTTNYYG 180

Query: 181 INTDDDRPYVVLQHPTTTEQLLPATKQPPSQDSTDF 200
           INTDDD+ +VV QHP TTEQ+LPAT+QPPS+DSTDF
Sbjct: 181 INTDDDKRHVVRQHPITTEQVLPATEQPPSKDSTDF 216

[Close]

BLAST of PI0019576 vs. ExPASy TrEMBL
Match: A0A6J5VJB6 (LOB domain-containing protein OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS45407 PE=3 SV=1)

HSP 1 Score: 145.6 bits (366), Expect = 2.2e-31
Identity = 84/188 (44.68%), Postives = 118/188 (62.77%), Query Frame = 0


Query: 1   MSSSNSQPQKTYGSPCASCKYLRRKCDPYCIFAPHFPADQPQKFYVVHAVYGASNVSKIL 60
           MSSSN        SPCA+CK+LRRKC   C+FAP+FP DQPQKF  VH V+GASNV+KIL
Sbjct: 1   MSSSN--------SPCAACKFLRRKCTQECVFAPYFPPDQPQKFANVHKVFGASNVAKIL 60

Query: 61  KTLRYDEREEAVKSLVFEAEARLKDPVHGCVAIISILQVRLQRLRTELSIVRQELSSYML 120
             L   +RE+AV SL +EAEARL+DPV+GCV +ISILQ RL++++ +L   ++EL++YM 
Sbjct: 61  NELNATQREDAVNSLAYEAEARLRDPVYGCVGLISILQQRLKQVQADLYNAKKELATYMG 120

Query: 121 PE-----LPPNSSYMVSKIPSSWSQRPMMEGQSSRQRVDGFGTSNYDGINTDDDRPYVVL 180
           P+     L P  +YM  +          ++G +S   V  +  S   GI+T      +++
Sbjct: 121 PQAMLSILQPPPTYMPQQ----------LQGNASSSAVSPYTMSPMMGISTGPTSGQLMI 170

Query: 181 QHPTTTEQ 184
           + P   +Q
Sbjct: 181 REPQQQQQ 170

[Close]

BLAST of PI0019576 vs. ExPASy TrEMBL
Match: A0A6P5EHI1 (LOB domain-containing protein 25-like OS=Ananas comosus OX=4615 GN=LOC109706404 PE=3 SV=1)

HSP 1 Score: 144.8 bits (364), Expect = 3.8e-31
Identity = 72/124 (58.06%), Postives = 92/124 (74.19%), Query Frame = 0


Query: 1   MSSSNSQPQKTYGSPCASCKYLRRKCDPYCIFAPHFPADQPQKFYVVHAVYGASNVSKIL 60
           MSSS+S    T  SPCA+CK+LRRKC P CIFAP+FP ++PQKF  VH V+GASNV+K+L
Sbjct: 1   MSSSSSSSSSTSNSPCAACKFLRRKCMPGCIFAPYFPPEEPQKFINVHKVFGASNVTKLL 60

Query: 61  KTLRYDEREEAVKSLVFEAEARLKDPVHGCVAIISILQVRLQRLRTELSIVRQELSSYML 120
             L   +RE+AV SL +EAEAR+KDPV+GCV  IS+LQ ++QRL+ EL I   +L  Y  
Sbjct: 61  NELLPHQREDAVNSLAYEAEARVKDPVYGCVGAISVLQRQVQRLQKELEIAHADLLRYAC 120

Query: 121 PELP 125
            E+P
Sbjct: 121 GEIP 124

[Close]

BLAST of PI0019576 vs. NCBI nr
Match: XP_008439580.1 (PREDICTED: LOB domain-containing protein 12-like [Cucumis melo])

HSP 1 Score: 297.7 bits (761), Expect = 7.2e-77
Identity = 164/240 (68.33%), Postives = 176/240 (73.33%), Query Frame = 0


Query: 1   MSSSNSQPQKTYGSPCASCKYLRRKCDPYCIFAPHFPADQPQKFYVVHAVYGASNVSKIL 60
           MSS NSQPQKTYGSPCASCK+LRRKCD  CIFAPHFPADQP+KF VVH +YGASNVSKIL
Sbjct: 1   MSSFNSQPQKTYGSPCASCKFLRRKCDADCIFAPHFPADQPKKFEVVHRIYGASNVSKIL 60

Query: 61  KTLRYDEREEAVKSLVFEAEARLKDPVHGCVAIISILQVRLQRLRTELSIVRQELSSYML 120
           K LRYDEREE V SLVFEAEARL+DPV GCVA+IS LQ RLQ L+TELSI R+ELSSYM 
Sbjct: 61  KALRYDEREETVNSLVFEAEARLRDPVRGCVALISDLQDRLQMLQTELSIARRELSSYMP 120

Query: 121 PELPPN-SSYMVSKIPSSW---------------------------------------SQ 180
            ELPPN SSYM SK+P +W                                       SQ
Sbjct: 121 SELPPNYSSYMASKLPPNWSYMASKLRPNSSYMASKLRPNLSYMISELLPKWPGESSTSQ 180

Query: 181 RPMMEGQSSRQRVDGFGTSNYDGINTDDDRPYVVLQHP-TTTEQLLPATKQPPSQDSTDF 200
           RPMMEGQSS QRVDGFGT+NY GIN DDDR +VV QHP TTTEQLLPAT+QPPSQDS DF
Sbjct: 181 RPMMEGQSSSQRVDGFGTTNYYGINNDDDRRHVVFQHPVTTTEQLLPATEQPPSQDSIDF 240

[Close]

BLAST of PI0019576 vs. NCBI nr
Match: KAA0052511.1 (LOB domain-containing protein 12-like [Cucumis melo var. makuwa] >TYK13314.1 LOB domain-containing protein 12-like [Cucumis melo var. makuwa])

HSP 1 Score: 297.7 bits (761), Expect = 7.2e-77
Identity = 164/240 (68.33%), Postives = 176/240 (73.33%), Query Frame = 0


Query: 1   MSSSNSQPQKTYGSPCASCKYLRRKCDPYCIFAPHFPADQPQKFYVVHAVYGASNVSKIL 60
           MSS NSQPQKTYGSPCASCK+LRRKCD  CIFAPHFPADQP+KF VVH +YGASNVSKIL
Sbjct: 1   MSSFNSQPQKTYGSPCASCKFLRRKCDADCIFAPHFPADQPKKFEVVHRIYGASNVSKIL 60

Query: 61  KTLRYDEREEAVKSLVFEAEARLKDPVHGCVAIISILQVRLQRLRTELSIVRQELSSYML 120
           K LRYDEREE V SLVFEAEARL+DPV GCVA+IS LQ RLQ L+TELSI R+ELSSYM 
Sbjct: 61  KALRYDEREETVNSLVFEAEARLRDPVRGCVALISDLQDRLQMLQTELSIARRELSSYMP 120

Query: 121 PELPPN-SSYMVSKIPSSW---------------------------------------SQ 180
            ELPPN SSYM SK+P +W                                       SQ
Sbjct: 121 SELPPNYSSYMASKLPPNWSCMASKLRPNSSYMASKLRPNSSYMISELLPKWPGESSTSQ 180

Query: 181 RPMMEGQSSRQRVDGFGTSNYDGINTDDDRPYVVLQHP-TTTEQLLPATKQPPSQDSTDF 200
           RPMMEGQSS QRVDGFGT+NY GIN DDDR +VV QHP TTTEQLLPAT+QPPSQDS DF
Sbjct: 181 RPMMEGQSSSQRVDGFGTTNYYGINNDDDRRHVVFQHPVTTTEQLLPATEQPPSQDSIDF 240

[Close]

BLAST of PI0019576 vs. NCBI nr
Match: XP_004134907.3 (protein LATERAL ORGAN BOUNDARIES [Cucumis sativus])

HSP 1 Score: 285.0 bits (728), Expect = 4.9e-73
Identity = 158/249 (63.45%), Postives = 178/249 (71.49%), Query Frame = 0


Query: 1   MSSSNSQPQKTYGSPCASCKYLRRKCDPYCIFAPHFPADQPQKFYVVHAVYGASNVSKIL 60
           MSSSNSQ QK YGSPCASCK+LRRKCD  CIFAP+FPADQPQKF VVH +YGASNVSKIL
Sbjct: 1   MSSSNSQSQKIYGSPCASCKFLRRKCDVDCIFAPYFPADQPQKFEVVHRIYGASNVSKIL 60

Query: 61  KTLRYDEREEAVKSLVFEAEARLKDPVHGCVAIISILQVRLQRLRTELSIVRQEL----- 120
           K  RYDEREE VKSLVFEAEARL+DPVHGCVA I+ LQ RLQRL+TEL+IV+Q+L     
Sbjct: 61  KASRYDEREETVKSLVFEAEARLEDPVHGCVAFIAGLQQRLQRLQTELAIVQQQLLSYMA 120

Query: 121 ----------------------------SSYMLPELPPNSSYMVSKIP------------ 180
                                       SSYML ELPPNSSYM S++P            
Sbjct: 121 SQLPPNSSYMASELPPNSSYMASELPPNSSYMLSELPPNSSYMASELPLNSSYMLSELLP 180

Query: 181 -----SSWSQRPMMEGQSSRQRVDGFGTSNYDGINTDDDRPYVVLQHPTTTEQLLPATKQ 200
                SS SQ+PMME QSS +RVDG+GT+NY GINTDDD+ +VV QHP TTEQ+LPAT+Q
Sbjct: 181 KWPRESSLSQQPMMEDQSSCRRVDGYGTTNYYGINTDDDKRHVVRQHPITTEQVLPATEQ 240

[Close]

BLAST of PI0019576 vs. NCBI nr
Match: KAE8647756.1 (hypothetical protein Csa_003034 [Cucumis sativus])

HSP 1 Score: 218.4 bits (555), Expect = 5.6e-53
Identity = 128/228 (56.14%), Postives = 147/228 (64.47%), Query Frame = 0


Query: 1   MSSSNSQPQKTYGSPCASCKYLRRKCDPYCIFAPHFPADQPQKFYVVHAVYGASNVSKIL 60
           MSSSNSQ QK YGSPCASCK+LRRKCD  CIFAP+FPADQPQKF VVH +YGASNVSKIL
Sbjct: 1   MSSSNSQSQKIYGSPCASCKFLRRKCDVDCIFAPYFPADQPQKFEVVHRIYGASNVSKIL 60

Query: 61  KTLRYDEREEAVKSLVFEAEARLKDPVHGCVAIISILQVRLQRLRTELSIVRQEL----- 120
           K  RYDEREE VKSLVFEAEARL+DPVHGCVA I+ LQ RLQRL+TEL+IV+Q+L     
Sbjct: 61  KASRYDEREETVKSLVFEAEARLEDPVHGCVAFIAGLQQRLQRLQTELAIVQQQLLSYMA 120

Query: 121 ----------------------------SSYMLPELPPNSSYMVSKIP------------ 179
                                       SSYML ELPPNSSYM S++P            
Sbjct: 121 SQLPPNSSYMASELPPNSSYMASELPPNSSYMLSELPPNSSYMASELPLNSSYMLSELLP 180

[Close]

BLAST of PI0019576 vs. NCBI nr
Match: XP_038881578.1 (protein ASYMMETRIC LEAVES 2-like [Benincasa hispida])

HSP 1 Score: 168.3 bits (425), Expect = 6.6e-38
Identity = 83/133 (62.41%), Postives = 104/133 (78.20%), Query Frame = 0


Query: 1   MSSSNS-----QPQKTYGSPCASCKYLRRKCDPYCIFAPHFPADQPQKFYVVHAVYGASN 60
           MSSSNS     +P   YGSPCA+CK+LRRKC P CIFAPHFPADQP+KF  +H +YGASN
Sbjct: 1   MSSSNSHSQSQKPSINYGSPCAACKFLRRKCLPDCIFAPHFPADQPKKFEAIHTIYGASN 60

Query: 61  VSKILKTLRYDEREEAVKSLVFEAEARLKDPVHGCVAIISILQVRLQRLRTELSIVRQEL 120
           VSK+L  L YDER++A KSL++EAEA  +DPVHGCV  ISILQ RL  L+ EL+I R+EL
Sbjct: 61  VSKLLNQLSYDERDKAAKSLIYEAEAWQRDPVHGCVGFISILQKRLNELQIELAIARREL 120

Query: 121 SSYMLPELPPNSS 129
           S+Y++ E P +++
Sbjct: 121 STYIVSEAPQDAN 133

[Close]

BLAST of PI0019576 vs. TAIR 10
Match: AT1G65620.1 (Lateral organ boundaries (LOB) domain family protein )

HSP 1 Score: 137.9 bits (346), Expect = 8.9e-33
Identity = 63/105 (60.00%), Postives = 84/105 (80.00%), Query Frame = 0


Query: 14  SPCASCKYLRRKCDPYCIFAPHFPADQPQKFYVVHAVYGASNVSKILKTLRYDEREEAVK 73
           SPCA+CK+LRRKC P C+FAP+FP DQPQKF  VH V+GASNV+K+L  L   +RE+AV 
Sbjct: 8   SPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPSQREDAVN 67

Query: 74  SLVFEAEARLKDPVHGCVAIISILQVRLQRLRTELSIVRQELSSY 119
           SL +EA+ RL+DPV+GCV +IS+LQ +L++L+ +LS  + ELS Y
Sbjct: 68  SLAYEADMRLRDPVYGCVGVISLLQHQLRQLQIDLSCAKSELSKY 112

[Close]

BLAST of PI0019576 vs. TAIR 10
Match: AT1G65620.2 (Lateral organ boundaries (LOB) domain family protein )

HSP 1 Score: 137.9 bits (346), Expect = 8.9e-33
Identity = 63/105 (60.00%), Postives = 84/105 (80.00%), Query Frame = 0


Query: 14  SPCASCKYLRRKCDPYCIFAPHFPADQPQKFYVVHAVYGASNVSKILKTLRYDEREEAVK 73
           SPCA+CK+LRRKC P C+FAP+FP DQPQKF  VH V+GASNV+K+L  L   +RE+AV 
Sbjct: 8   SPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPSQREDAVN 67

Query: 74  SLVFEAEARLKDPVHGCVAIISILQVRLQRLRTELSIVRQELSSY 119
           SL +EA+ RL+DPV+GCV +IS+LQ +L++L+ +LS  + ELS Y
Sbjct: 68  SLAYEADMRLRDPVYGCVGVISLLQHQLRQLQIDLSCAKSELSKY 112

[Close]

BLAST of PI0019576 vs. TAIR 10
Match: AT1G65620.3 (Lateral organ boundaries (LOB) domain family protein )

HSP 1 Score: 137.9 bits (346), Expect = 8.9e-33
Identity = 63/105 (60.00%), Postives = 84/105 (80.00%), Query Frame = 0


Query: 14  SPCASCKYLRRKCDPYCIFAPHFPADQPQKFYVVHAVYGASNVSKILKTLRYDEREEAVK 73
           SPCA+CK+LRRKC P C+FAP+FP DQPQKF  VH V+GASNV+K+L  L   +RE+AV 
Sbjct: 8   SPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPSQREDAVN 67

Query: 74  SLVFEAEARLKDPVHGCVAIISILQVRLQRLRTELSIVRQELSSY 119
           SL +EA+ RL+DPV+GCV +IS+LQ +L++L+ +LS  + ELS Y
Sbjct: 68  SLAYEADMRLRDPVYGCVGVISLLQHQLRQLQIDLSCAKSELSKY 112

[Close]

BLAST of PI0019576 vs. TAIR 10
Match: AT1G65620.4 (Lateral organ boundaries (LOB) domain family protein )

HSP 1 Score: 137.9 bits (346), Expect = 8.9e-33
Identity = 63/105 (60.00%), Postives = 84/105 (80.00%), Query Frame = 0


Query: 14  SPCASCKYLRRKCDPYCIFAPHFPADQPQKFYVVHAVYGASNVSKILKTLRYDEREEAVK 73
           SPCA+CK+LRRKC P C+FAP+FP DQPQKF  VH V+GASNV+K+L  L   +RE+AV 
Sbjct: 8   SPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPSQREDAVN 67

Query: 74  SLVFEAEARLKDPVHGCVAIISILQVRLQRLRTELSIVRQELSSY 119
           SL +EA+ RL+DPV+GCV +IS+LQ +L++L+ +LS  + ELS Y
Sbjct: 68  SLAYEADMRLRDPVYGCVGVISLLQHQLRQLQIDLSCAKSELSKY 112

[Close]

BLAST of PI0019576 vs. TAIR 10
Match: AT5G66870.1 (ASYMMETRIC LEAVES 2-like 1 )

HSP 1 Score: 137.5 bits (345), Expect = 1.2e-32
Identity = 72/137 (52.55%), Postives = 98/137 (71.53%), Query Frame = 0


Query: 14  SPCASCKYLRRKCDPYCIFAPHFPADQPQKFYVVHAVYGASNVSKILKTLRYDEREEAVK 73
           SPCA+CK+LRRKC   C+FAP+FP DQPQKF  VH V+GASNV+K+L  L  ++RE+AV 
Sbjct: 6   SPCAACKFLRRKCTQECVFAPYFPPDQPQKFAFVHKVFGASNVAKLLNELASNQREDAVN 65

Query: 74  SLVFEAEARLKDPVHGCVAIISILQVRLQRLRTELSIVRQELSSYMLPE--LPPNSSYMV 133
           SL +EAEARL+DPV+GCV +ISILQ RL+++  +L   ++EL++Y+ P+  LP    + +
Sbjct: 66  SLFYEAEARLRDPVYGCVGLISILQHRLKQVNHDLENAKKELATYVGPQAMLPILQPHFM 125

Query: 134 SKIPSSWSQRPMMEGQS 149
           S  P    QRP     S
Sbjct: 126 SLPPQ--PQRPSSSSAS 140

The following BLAST results are available for this feature:

BLAST of PI0019576 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O04479	1.3e-31	60.00	Protein ASYMMETRIC LEAVES 2 OS=Arabidopsis thaliana OX=3702 GN=AS2 PE=1 SV=1	[more]
Q9FKZ3	1.6e-31	52.55	LOB domain-containing protein 36 OS=Arabidopsis thaliana OX=3702 GN=LBD36 PE=2 S...	[more]
A2WXT0	3.7e-31	61.32	LOB domain-containing protein 6 OS=Oryza sativa subsp. indica OX=39946 GN=LBD6 P...	[more]
Q8LQH4	3.7e-31	61.32	LOB domain-containing protein 6 OS=Oryza sativa subsp. japonica OX=39947 GN=LBD6...	[more]
Q32SG3	8.2e-31	59.43	LOB domain-containing protein 6 OS=Zea mays OX=4577 GN=LBD6 PE=1 SV=1	[more]

BLAST of PI0019576 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CQL4	3.5e-77	68.33	LOB domain-containing protein 12-like OS=Cucumis melo var. makuwa OX=1194695 GN=...	[more]
A0A1S3AYN9	3.5e-77	68.33	LOB domain-containing protein 12-like OS=Cucumis melo OX=3656 GN=LOC103484334 PE...	[more]
A0A0A0KIS2	7.8e-77	71.76	LOB domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G525240 PE=3 SV...	[more]
A0A6J5VJB6	2.2e-31	44.68	LOB domain-containing protein OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS45407 ...	[more]
A0A6P5EHI1	3.8e-31	58.06	LOB domain-containing protein 25-like OS=Ananas comosus OX=4615 GN=LOC109706404 ...	[more]

BLAST of PI0019576 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008439580.1	7.2e-77	68.33	PREDICTED: LOB domain-containing protein 12-like [Cucumis melo]	[more]
KAA0052511.1	7.2e-77	68.33	LOB domain-containing protein 12-like [Cucumis melo var. makuwa] >TYK13314.1 LOB...	[more]
XP_004134907.3	4.9e-73	63.45	protein LATERAL ORGAN BOUNDARIES [Cucumis sativus]	[more]
KAE8647756.1	5.6e-53	56.14	hypothetical protein Csa_003034 [Cucumis sativus]	[more]
XP_038881578.1	6.6e-38	62.41	protein ASYMMETRIC LEAVES 2-like [Benincasa hispida]	[more]

BLAST of PI0019576 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G65620.1	8.9e-33	60.00	Lateral organ boundaries (LOB) domain family protein	[more]
AT1G65620.2	8.9e-33	60.00	Lateral organ boundaries (LOB) domain family protein	[more]
AT1G65620.3	8.9e-33	60.00	Lateral organ boundaries (LOB) domain family protein	[more]
AT1G65620.4	8.9e-33	60.00	Lateral organ boundaries (LOB) domain family protein	[more]
AT5G66870.1	1.2e-32	52.55	ASYMMETRIC LEAVES 2-like 1	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 94..114
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 176..199
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 140..199
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 140..165
None	No IPR available	PANTHER	PTHR31301:SF68	LOB DOMAIN-CONTAINING PROTEIN 32-RELATED	coord: 13..147
None	No IPR available	PANTHER	PTHR31301	LOB DOMAIN-CONTAINING PROTEIN 4-RELATED	coord: 13..147
IPR004883	Lateral organ boundaries, LOB	PFAM	PF03195	LOB	coord: 15..112 e-value: 4.1E-36 score: 123.5
IPR004883	Lateral organ boundaries, LOB	PROSITE	PS50891	LOB	coord: 14..115 score: 24.726667

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0019576.1	PI0019576.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016020	membrane