PI0019564 (gene) Melon (PI 482460) v1

Overview


Name	PI0019564
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	protodermal factor 1-like
Location	chr11: 9323534 .. 9325861 (+)
RNA-Seq Expression	PI0019564
Synteny	PI0019564

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TAAAATATATGGACCAAAATGAATCAAAGTTGGAAAAATAAGGACCAAAATAATCATTCTGAAAATATATACAAAAATGAACCAGAACCAAAATGGACCAGAGTAGCATCACAATTTTGAATTATATATCATAATAGCTATACTATGGAGACTATATCTAATAAATTTATCAGGAGAAGTGAGAGGTTCAAAATTTCATAGGCATGCATGTGATTTCACCTCCCTCCCCAATGAATTCATCCCTGGAAAATCTGAACATTATTTGAAACAATTAAAAGCAGCAAGCAATATGAATAAATGCACCAATAAAACAGCAACTAACCACATACTCTCCACCTGTAAGAAGTAACTTCACTTTCCCTCAACCCCCCCTTCTATATATTCCCCCATTTGTTCTAAACATTCCATCCATCACCATTCCCATTCCTTCCCTTCTTTCCCATCTCTAATCCCTTTGCTCCCCCAATCAGAAAAACAGCCAACCGAAGAAACAACCATGAGAAGCAAACAAGCTCCTGCTCTCCTTTTCACTTTGCTTGCTGGGCTGCTTTCTCAAAGCCTACTCATCCCTGTATTGTCCACCTCCATTGCTGATCAGAAAAGCTACTACTCTCCTCCAGACCCACATTCTGGATCTCCCCCATCAGGTTATTGCACATTCACAATGAATCTCACACATACAGTATCAGTATAGTTGTAATGGTAGTGGTTAGTAGGCTTACAGCATTATATGTTTACTTTGCATTGCAGGTTCACATGGCAGCCCTATCCCACCATCACATGGTAATGGAGGAACGCCACATTACTCCACACCAACTCCTTCCACACCGTCAAATCCGCCGTCTGGTGGTGGTGGATACTACAACCCTCCGTCTTCTGGTGGTAGCCCACCAAGCACCCCTGTAGATCCAGGCACTCCTAGCACTCCAAGCACTCCTAGTGTTCCTAGCACACCAAGCACACCAAGCACACCTACCATTCCCACTACTCCATTTACCTGCAAGTAAGTCAAGGGTTTATAGTAACTGTTTTCCATGGAGAAGATAACATATTTGTTTATTAAAATGTGTTTGTTACTTTGTTTGCAGTTATTGGCTGAATCATCCAGGATTGATATGGGGAGTATTGGGATGGTGGGGAACATTAGGAAATGCCTTCGGAGCAACCAATGTTCCAGGGTTTGGAACAAATCTGAACTTGCTCCAAGCACTTTCTAACACAAGGAATGATGGGTATGGGGCCCTTTTGAGAGAAGGAACTGCTTCGTACCTCAACTCTCTTGCTAGTAACAGATTCCCCTACACAACCAAGCAAGTTAGGACAAGTTTCGTCTCGGCACTCAACTCCAACAAAGCAGCAGCTGATCAGGCCAACACGTTCAAGTTAGCCAACGAGGGCAAAATTAAACCCAGAGCTTGATTTCCCCCCTTTTTCCTACCATTTACCATCTTAATAACTAATGAGTGTGCCTTAGCAGTTAGTAGTGAGACAGTGAGACCAATTTACCATTGCATGTGTTGTTTTGTTTTATTTTGTTCTTGTTTCTAGTTTCTTGCAATCTCTTTTGTTCATGTATTTGAACATAGAGATGCTCGTCTTTGTTATCCAAATTCATTGTGAAATCAAGATTTGTTTCAAGTAGTTATATTTGTTTAATCAGATTATCCAAAAGGGGGTTGAAAATTAAAAGTTCAGATGCTTGTTATCTACACTAATCTATAGTTTCTATCACTATGCTTTAAAAGGGTAGCAAAATCCATGAAGTGTTGTATTTATGGCGCATTAATGAGGAAATCCACTACATTCAATAAGGTTAACCTACAAAAGAACAAACAACTTGGGATGCCCTTGGGTTGAATTTAATGACCAGAGCTTGATTTTGTGAACAGTATAAATGCTAAATCTCAAATATCAACGGTGCAAAAAGAAGACATAATAGAGTAAGTGCAGTAAACAAACTCATATAGATGGAAGAAGCCAACAGCCATAAGGAAACGTCCGGTCCGGTGCTCTGAGAAGGTGGGTCCGCTAGTTAAGAACTCCCATTAAGCCAACCACCCAAGATATTTTACCTTGAAAAACAGCAGGAAAAGTAATAATAGGAACATAAACTCATGTCTTTAACAAAAAGTTCAGTTGTTCATAGCCATAAATTTAGCCTGATAATCTTCTCACACCAATGGAGATTCTATTGTTCCTTGGATGGAAGAACAATATGACAGTATTTCAAATTAAGTACCAAACAACATTTCACATTGAAGATTAGATTGTAGACCACCAAGCACCAGCCAGAACAACAAAATGGGAGTTGAAATTTATCATTTATTC

mRNA sequence

TAAAATATATGGACCAAAATGAATCAAAGTTGGAAAAATAAGGACCAAAATAATCATTCTGAAAATATATACAAAAATGAACCAGAACCAAAATGGACCAGAGTAGCATCACAATTTTGAATTATATATCATAATAGCTATACTATGGAGACTATATCTAATAAATTTATCAGGAGAAGTGAGAGGTTCAAAATTTCATAGGCATGCATGTGATTTCACCTCCCTCCCCAATGAATTCATCCCTGGAAAATCTGAACATTATTTGAAACAATTAAAAGCAGCAAGCAATATGAATAAATGCACCAATAAAACAGCAACTAACCACATACTCTCCACCTGTAAGAAGTAACTTCACTTTCCCTCAACCCCCCCTTCTATATATTCCCCCATTTGTTCTAAACATTCCATCCATCACCATTCCCATTCCTTCCCTTCTTTCCCATCTCTAATCCCTTTGCTCCCCCAATCAGAAAAACAGCCAACCGAAGAAACAACCATGAGAAGCAAACAAGCTCCTGCTCTCCTTTTCACTTTGCTTGCTGGGCTGCTTTCTCAAAGCCTACTCATCCCTGTATTGTCCACCTCCATTGCTGATCAGAAAAGCTACTACTCTCCTCCAGACCCACATTCTGGATCTCCCCCATCAGGTTCACATGGCAGCCCTATCCCACCATCACATGGTAATGGAGGAACGCCACATTACTCCACACCAACTCCTTCCACACCGTCAAATCCGCCGTCTGGTGGTGGTGGATACTACAACCCTCCGTCTTCTGGTGGTAGCCCACCAAGCACCCCTGTAGATCCAGGCACTCCTAGCACTCCAAGCACTCCTAGTGTTCCTAGCACACCAAGCACACCAAGCACACCTACCATTCCCACTACTCCATTTACCTGCAATTATTGGCTGAATCATCCAGGATTGATATGGGGAGTATTGGGATGGTGGGGAACATTAGGAAATGCCTTCGGAGCAACCAATGTTCCAGGGTTTGGAACAAATCTGAACTTGCTCCAAGCACTTTCTAACACAAGGAATGATGGGTATGGGGCCCTTTTGAGAGAAGGAACTGCTTCGTACCTCAACTCTCTTGCTAGTAACAGATTCCCCTACACAACCAAGCAAGTTAGGACAAGTTTCGTCTCGGCACTCAACTCCAACAAAGCAGCAGCTGATCAGGCCAACACGTTCAAGTTAGCCAACGAGGGCAAAATTAAACCCAGAGCTTGATTTCCCCCCTTTTTCCTACCATTTACCATCTTAATAACTAATGAGTGTGCCTTAGCAGTTAGTAGTGAGACAGTGAGACCAATTTACCATTGCATGTGTTGTTTTGTTTTATTTTGTTCTTGTTTCTAGTTTCTTGCAATCTCTTTTGTTCATGTATTTGAACATAGAGATGCTCGTCTTTGTTATCCAAATTCATTGTGAAATCAAGATTTGTTTCAAGTAGTTATATTTGTTTAATCAGATTATCCAAAAGGGGGTTGAAAATTAAAAGTTCAGATGCTTGTTATCTACACTAATCTATAGTTTCTATCACTATGCTTTAAAAGGGTAGCAAAATCCATGAAGTGTTGTATTTATGGCGCATTAATGAGGAAATCCACTACATTCAATAAGGTTAACCTACAAAAGAACAAACAACTTGGGATGCCCTTGGGTTGAATTTAATGACCAGAGCTTGATTTTGTGAACAGTATAAATGCTAAATCTCAAATATCAACGGTGCAAAAAGAAGACATAATAGAGTAAGTGCAGTAAACAAACTCATATAGATGGAAGAAGCCAACAGCCATAAGGAAACGTCCGGTCCGGTGCTCTGAGAAGGTGGGTCCGCTAGTTAAGAACTCCCATTAAGCCAACCACCCAAGATATTTTACCTTGAAAAACAGCAGGAAAAGTAATAATAGGAACATAAACTCATGTCTTTAACAAAAAGTTCAGTTGTTCATAGCCATAAATTTAGCCTGATAATCTTCTCACACCAATGGAGATTCTATTGTTCCTTGGATGGAAGAACAATATGACAGTATTTCAAATTAAGTACCAAACAACATTTCACATTGAAGATTAGATTGTAGACCACCAAGCACCAGCCAGAACAACAAAATGGGAGTTGAAATTTATCATTTATTC

Coding sequence (CDS)

ATGAGAAGCAAACAAGCTCCTGCTCTCCTTTTCACTTTGCTTGCTGGGCTGCTTTCTCAAAGCCTACTCATCCCTGTATTGTCCACCTCCATTGCTGATCAGAAAAGCTACTACTCTCCTCCAGACCCACATTCTGGATCTCCCCCATCAGGTTCACATGGCAGCCCTATCCCACCATCACATGGTAATGGAGGAACGCCACATTACTCCACACCAACTCCTTCCACACCGTCAAATCCGCCGTCTGGTGGTGGTGGATACTACAACCCTCCGTCTTCTGGTGGTAGCCCACCAAGCACCCCTGTAGATCCAGGCACTCCTAGCACTCCAAGCACTCCTAGTGTTCCTAGCACACCAAGCACACCAAGCACACCTACCATTCCCACTACTCCATTTACCTGCAATTATTGGCTGAATCATCCAGGATTGATATGGGGAGTATTGGGATGGTGGGGAACATTAGGAAATGCCTTCGGAGCAACCAATGTTCCAGGGTTTGGAACAAATCTGAACTTGCTCCAAGCACTTTCTAACACAAGGAATGATGGGTATGGGGCCCTTTTGAGAGAAGGAACTGCTTCGTACCTCAACTCTCTTGCTAGTAACAGATTCCCCTACACAACCAAGCAAGTTAGGACAAGTTTCGTCTCGGCACTCAACTCCAACAAAGCAGCAGCTGATCAGGCCAACACGTTCAAGTTAGCCAACGAGGGCAAAATTAAACCCAGAGCTTGA

Protein sequence

MRSKQAPALLFTLLAGLLSQSLLIPVLSTSIADQKSYYSPPDPHSGSPPSGSHGSPIPPSHGNGGTPHYSTPTPSTPSNPPSGGGGYYNPPSSGGSPPSTPVDPGTPSTPSTPSVPSTPSTPSTPTIPTTPFTCNYWLNHPGLIWGVLGWWGTLGNAFGATNVPGFGTNLNLLQALSNTRNDGYGALLREGTASYLNSLASNRFPYTTKQVRTSFVSALNSNKAAADQANTFKLANEGKIKPRA

Homology

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BLAST of PI0019564 vs. ExPASy Swiss-Prot
Match: Q9S728 (Protodermal factor 1 OS=Arabidopsis thaliana OX=3702 GN=PDF1 PE=2 SV=1)

HSP 1 Score: 186.4 bits (472), Expect = 3.8e-46
Identity = 141/300 (47.00%), Postives = 172/300 (57.33%), Query Frame = 0


Query: 10  LFTLLAGLLSQSLLIPVLSTSIADQKSYY-SPPD-----PHSGSPPSGSHGS-------- 69
           ++ L A LLSQ L   V S    D K+YY SPP      P S +PPS + GS        
Sbjct: 9   VWALFAALLSQQLFASVASVRFEDAKTYYLSPPSGSHGTPPSHTPPSSNCGSPPYDPSPS 68

Query: 70  ----PIPPSHG--------------------------NGGTP--------HYSTPTPSTP 129
               P PPSH                           N G+P        H STP+  TP
Sbjct: 69  TPSHPSPPSHTPTPSTPSHTPTPHTPSHTPTPHTPPCNCGSPPSHPSTPSHPSTPSHPTP 128

Query: 130 SNPPSGGGGYYNPPSSGG----SPPSTPVDPGTPSTPSTPSVP-STPSTPSTPTIPTTPF 189
           S+PPS  GGYY+ P        +PPS  VDPGTP    +P  P   P TP TP IP  PF
Sbjct: 129 SHPPS--GGYYSSPPPRTPVVVTPPSPIVDPGTPIIGGSPPTPIIDPGTPGTPFIP-APF 188

Query: 190 -----TCNYWLNHPGLIWGVLGWWGTLGNAFGA----TNVPGFGTNLNLLQALSNTRNDG 244
                TC+YW NHP LIWG+LGWWGT+G AFG     +++PGF  ++NLLQALSNTR+D 
Sbjct: 189 PPITGTCDYWRNHPTLIWGLLGWWGTVGGAFGTVSIPSSIPGFDPHMNLLQALSNTRSDP 248

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BLAST of PI0019564 vs. ExPASy TrEMBL
Match: A0A5A7UHX0 (Protodermal factor 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold22G00090 PE=4 SV=1)

HSP 1 Score: 436.0 bits (1120), Expect = 1.0e-118
Identity = 233/244 (95.49%), Postives = 234/244 (95.90%), Query Frame = 0


Query: 1   MRSKQAPALLFTLLAGLLSQSLLIPVLSTSIADQKSYYSPPDPHSGSPPSGSHGSPIPPS 60
           MRSKQA ALLFTLLAGLLSQSLLIPVLSTSI DQKSYYSPPDPHSGSPPSGSHGSPIPPS
Sbjct: 1   MRSKQASALLFTLLAGLLSQSLLIPVLSTSITDQKSYYSPPDPHSGSPPSGSHGSPIPPS 60

Query: 61  HGNGGTPHYSTPTPSTPSNPPSGGGGYYNPPSSGGSPPSTPVDPGTPSTPSTPSVPSTPS 120
           HGNGGTPHYSTPTPST    PSGGGGYYNPPSSGGSPPSTPVDPGTPSTPSTPSV   PS
Sbjct: 61  HGNGGTPHYSTPTPST----PSGGGGYYNPPSSGGSPPSTPVDPGTPSTPSTPSV---PS 120

Query: 121 TPSTPTIPTTPFTCNYWLNHPGLIWGVLGWWGTLGNAFGATNVPGFGTNLNLLQALSNTR 180
           TPSTPTIPTTPFTCNYWLNHPGLIWGVLGWWGTLGNAFGATNVPGFGTNLNLLQALSNTR
Sbjct: 121 TPSTPTIPTTPFTCNYWLNHPGLIWGVLGWWGTLGNAFGATNVPGFGTNLNLLQALSNTR 180

Query: 181 NDGYGALLREGTASYLNSLASNRFPYTTKQVRTSFVSALNSNKAAADQANTFKLANEGKI 240
           NDGYGALLREGTASYLNSLASNRFPYTTKQVRTSFVSAL+SNKAA DQANTFKLANEGKI
Sbjct: 181 NDGYGALLREGTASYLNSLASNRFPYTTKQVRTSFVSALSSNKAAGDQANTFKLANEGKI 237

Query: 241 KPRA 245
           KPRA
Sbjct: 241 KPRA 237

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BLAST of PI0019564 vs. ExPASy TrEMBL
Match: A0A1S3C4A9 (protodermal factor 1-like OS=Cucumis melo OX=3656 GN=LOC103496321 PE=4 SV=1)

HSP 1 Score: 436.0 bits (1120), Expect = 1.0e-118
Identity = 233/244 (95.49%), Postives = 234/244 (95.90%), Query Frame = 0


Query: 1   MRSKQAPALLFTLLAGLLSQSLLIPVLSTSIADQKSYYSPPDPHSGSPPSGSHGSPIPPS 60
           MRSKQA ALLFTLLAGLLSQSLLIPVLSTSI DQKSYYSPPDPHSGSPPSGSHGSPIPPS
Sbjct: 1   MRSKQASALLFTLLAGLLSQSLLIPVLSTSITDQKSYYSPPDPHSGSPPSGSHGSPIPPS 60

Query: 61  HGNGGTPHYSTPTPSTPSNPPSGGGGYYNPPSSGGSPPSTPVDPGTPSTPSTPSVPSTPS 120
           HGNGGTPHYSTPTPST    PSGGGGYYNPPSSGGSPPSTPVDPGTPSTPSTPSV   PS
Sbjct: 61  HGNGGTPHYSTPTPST----PSGGGGYYNPPSSGGSPPSTPVDPGTPSTPSTPSV---PS 120

Query: 121 TPSTPTIPTTPFTCNYWLNHPGLIWGVLGWWGTLGNAFGATNVPGFGTNLNLLQALSNTR 180
           TPSTPTIPTTPFTCNYWLNHPGLIWGVLGWWGTLGNAFGATNVPGFGTNLNLLQALSNTR
Sbjct: 121 TPSTPTIPTTPFTCNYWLNHPGLIWGVLGWWGTLGNAFGATNVPGFGTNLNLLQALSNTR 180

Query: 181 NDGYGALLREGTASYLNSLASNRFPYTTKQVRTSFVSALNSNKAAADQANTFKLANEGKI 240
           NDGYGALLREGTASYLNSLASNRFPYTTKQVRTSFVSAL+SNKAA DQANTFKLANEGKI
Sbjct: 181 NDGYGALLREGTASYLNSLASNRFPYTTKQVRTSFVSALSSNKAAGDQANTFKLANEGKI 237

Query: 241 KPRA 245
           KPRA
Sbjct: 241 KPRA 237

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BLAST of PI0019564 vs. ExPASy TrEMBL
Match: A0A0A0KF76 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G178950 PE=4 SV=1)

HSP 1 Score: 434.9 bits (1117), Expect = 2.3e-118
Identity = 229/244 (93.85%), Postives = 235/244 (96.31%), Query Frame = 0


Query: 1   MRSKQAPALLFTLLAGLLSQSLLIPVLSTSIADQKSYYSPPDPHSGSPPSGSHGSPIPPS 60
           MRSKQ  AL+FTLLAGLLSQSLLIPVLSTSIADQKSYYSPPDPHSGSPPSGSH SP+PPS
Sbjct: 1   MRSKQVSALVFTLLAGLLSQSLLIPVLSTSIADQKSYYSPPDPHSGSPPSGSHSSPMPPS 60

Query: 61  HGNGGTPHYSTPTPSTPSNPPSGGGGYYNPPSSGGSPPSTPVDPGTPSTPSTPSVPSTPS 120
           HG+GGTPHYSTPTPSTPSNPPSGGGGYYNPPSSGGSPPSTPVDPGTPSTPSTPSV   PS
Sbjct: 61  HGSGGTPHYSTPTPSTPSNPPSGGGGYYNPPSSGGSPPSTPVDPGTPSTPSTPSV---PS 120

Query: 121 TPSTPTIPTTPFTCNYWLNHPGLIWGVLGWWGTLGNAFGATNVPGFGTNLNLLQALSNTR 180
           TP+TPTIPT PFTC YWLNHPGLIWGVLGWWGTLGNAFGATNVPGFGTNLNLLQALSNTR
Sbjct: 121 TPTTPTIPTIPFTCTYWLNHPGLIWGVLGWWGTLGNAFGATNVPGFGTNLNLLQALSNTR 180

Query: 181 NDGYGALLREGTASYLNSLASNRFPYTTKQVRTSFVSALNSNKAAADQANTFKLANEGKI 240
           NDGYGALLREGTASYLNSLASNRFPYTTKQVRTSFVSAL+SNKAA +QANTFKLANEGKI
Sbjct: 181 NDGYGALLREGTASYLNSLASNRFPYTTKQVRTSFVSALSSNKAAGNQANTFKLANEGKI 240

Query: 241 KPRA 245
           KPRA
Sbjct: 241 KPRA 241

[Close]

BLAST of PI0019564 vs. ExPASy TrEMBL
Match: A0A6J1I3W1 (protodermal factor 1-like OS=Cucurbita maxima OX=3661 GN=LOC111469672 PE=4 SV=1)

HSP 1 Score: 395.2 bits (1014), Expect = 2.0e-106
Identity = 212/251 (84.46%), Postives = 227/251 (90.44%), Query Frame = 0


Query: 1   MRSKQAPALLFTLLAGLLSQSLLIPVLSTSIADQKSYYSPPDPHSGSPPSGSHGSPIPPS 60
           MR+KQA  LLFTLLAGLLSQSLLIPVLST+IADQKSYYSPPDPH+G+PP+GSH +PIPPS
Sbjct: 1   MRTKQASPLLFTLLAGLLSQSLLIPVLSTTIADQKSYYSPPDPHAGTPPTGSHSNPIPPS 60

Query: 61  HGNGGT-PHYSTPTPSTPSNPPSGGGGYYNPPSSGGSPPSTPVDPGTPSTPSTPSVPSTP 120
           HG GGT PHYSTPTPSTPS  PSG  GYYNPPSSGGS P+TPVDPGTPSTPSTPS PSTP
Sbjct: 61  HGYGGTPPHYSTPTPSTPSKSPSGRSGYYNPPSSGGSTPTTPVDPGTPSTPSTPSTPSTP 120

Query: 121 STPSTPT---------IPTTPFTCNYWLNHPGLIWGVLGWWGTLGNAFGATNVPGFGTNL 180
           STPSTP+          PTTPFTCN+WLNHPG+IWGVLGWWGTLGN FGATNVPGFGTNL
Sbjct: 121 STPSTPSTPSTPSTPGTPTTPFTCNFWLNHPGMIWGVLGWWGTLGNCFGATNVPGFGTNL 180

Query: 181 NLLQALSNTRNDGYGALLREGTASYLNSLASNRFPYTTKQVRTSFVSALNSNKAAADQAN 240
           NLLQALSNTR DG+GALLREGTASYLNSLASNRFP+TTKQV++SFVSALNSN+AAADQAN
Sbjct: 181 NLLQALSNTRADGFGALLREGTASYLNSLASNRFPFTTKQVQSSFVSALNSNRAAADQAN 240

Query: 241 TFKLANEGKIK 242
            FKLANEGKIK
Sbjct: 241 IFKLANEGKIK 251

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BLAST of PI0019564 vs. ExPASy TrEMBL
Match: A0A6J1G5M6 (protodermal factor 1-like OS=Cucurbita moschata OX=3662 GN=LOC111451018 PE=4 SV=1)

HSP 1 Score: 392.1 bits (1006), Expect = 1.7e-105
Identity = 211/248 (85.08%), Postives = 227/248 (91.53%), Query Frame = 0


Query: 1   MRSKQAPALLFTLLAGLLSQSLLIPVLSTSIADQKSYYSPPDPHSGSPPSGSHGSPIPPS 60
           MR+KQA  LLFTLLAGLLSQSLLIPVLST+IADQKSYYSPPDPH+G+PP+GSH +PIPPS
Sbjct: 1   MRTKQASPLLFTLLAGLLSQSLLIPVLSTTIADQKSYYSPPDPHAGTPPTGSHSNPIPPS 60

Query: 61  HGNGGT-PHYSTPTPSTPSNPPSGGGGYYNPPSSGGSPPSTPVDPGTPSTPSTPSVPSTP 120
           HG GGT PHYSTPTPSTP+  PSGG GYYNPP SGGS P+TPVDPGTPSTPSTPS PSTP
Sbjct: 61  HGYGGTPPHYSTPTPSTPTKSPSGGSGYYNPP-SGGSTPTTPVDPGTPSTPSTPSTPSTP 120

Query: 121 STPSTPT------IPTTPFTCNYWLNHPGLIWGVLGWWGTLGNAFGATNVPGFGTNLNLL 180
           STPSTP+       PTTPFTCN+WLNHPG+IWGVLGWWGTLGN FGATNVPGFGTNLNLL
Sbjct: 121 STPSTPSTPSTPGTPTTPFTCNFWLNHPGMIWGVLGWWGTLGNCFGATNVPGFGTNLNLL 180

Query: 181 QALSNTRNDGYGALLREGTASYLNSLASNRFPYTTKQVRTSFVSALNSNKAAADQANTFK 240
           QALSNTR DG+GALLREGTASYLNSLASNRFP+TTKQV++SFVSALNSN+AAADQAN FK
Sbjct: 181 QALSNTRADGFGALLREGTASYLNSLASNRFPFTTKQVQSSFVSALNSNRAAADQANIFK 240

Query: 241 LANEGKIK 242
           LANEGKIK
Sbjct: 241 LANEGKIK 247

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BLAST of PI0019564 vs. NCBI nr
Match: XP_008456355.1 (PREDICTED: protodermal factor 1-like [Cucumis melo] >KAA0054578.1 protodermal factor 1-like [Cucumis melo var. makuwa] >TYK27542.1 protodermal factor 1-like [Cucumis melo var. makuwa])

HSP 1 Score: 436.0 bits (1120), Expect = 2.1e-118
Identity = 233/244 (95.49%), Postives = 234/244 (95.90%), Query Frame = 0


Query: 1   MRSKQAPALLFTLLAGLLSQSLLIPVLSTSIADQKSYYSPPDPHSGSPPSGSHGSPIPPS 60
           MRSKQA ALLFTLLAGLLSQSLLIPVLSTSI DQKSYYSPPDPHSGSPPSGSHGSPIPPS
Sbjct: 1   MRSKQASALLFTLLAGLLSQSLLIPVLSTSITDQKSYYSPPDPHSGSPPSGSHGSPIPPS 60

Query: 61  HGNGGTPHYSTPTPSTPSNPPSGGGGYYNPPSSGGSPPSTPVDPGTPSTPSTPSVPSTPS 120
           HGNGGTPHYSTPTPST    PSGGGGYYNPPSSGGSPPSTPVDPGTPSTPSTPSV   PS
Sbjct: 61  HGNGGTPHYSTPTPST----PSGGGGYYNPPSSGGSPPSTPVDPGTPSTPSTPSV---PS 120

Query: 121 TPSTPTIPTTPFTCNYWLNHPGLIWGVLGWWGTLGNAFGATNVPGFGTNLNLLQALSNTR 180
           TPSTPTIPTTPFTCNYWLNHPGLIWGVLGWWGTLGNAFGATNVPGFGTNLNLLQALSNTR
Sbjct: 121 TPSTPTIPTTPFTCNYWLNHPGLIWGVLGWWGTLGNAFGATNVPGFGTNLNLLQALSNTR 180

Query: 181 NDGYGALLREGTASYLNSLASNRFPYTTKQVRTSFVSALNSNKAAADQANTFKLANEGKI 240
           NDGYGALLREGTASYLNSLASNRFPYTTKQVRTSFVSAL+SNKAA DQANTFKLANEGKI
Sbjct: 181 NDGYGALLREGTASYLNSLASNRFPYTTKQVRTSFVSALSSNKAAGDQANTFKLANEGKI 237

Query: 241 KPRA 245
           KPRA
Sbjct: 241 KPRA 237

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BLAST of PI0019564 vs. NCBI nr
Match: XP_004143175.1 (protodermal factor 1 [Cucumis sativus] >KGN47037.1 hypothetical protein Csa_020699 [Cucumis sativus])

HSP 1 Score: 434.9 bits (1117), Expect = 4.7e-118
Identity = 229/244 (93.85%), Postives = 235/244 (96.31%), Query Frame = 0


Query: 1   MRSKQAPALLFTLLAGLLSQSLLIPVLSTSIADQKSYYSPPDPHSGSPPSGSHGSPIPPS 60
           MRSKQ  AL+FTLLAGLLSQSLLIPVLSTSIADQKSYYSPPDPHSGSPPSGSH SP+PPS
Sbjct: 1   MRSKQVSALVFTLLAGLLSQSLLIPVLSTSIADQKSYYSPPDPHSGSPPSGSHSSPMPPS 60

Query: 61  HGNGGTPHYSTPTPSTPSNPPSGGGGYYNPPSSGGSPPSTPVDPGTPSTPSTPSVPSTPS 120
           HG+GGTPHYSTPTPSTPSNPPSGGGGYYNPPSSGGSPPSTPVDPGTPSTPSTPSV   PS
Sbjct: 61  HGSGGTPHYSTPTPSTPSNPPSGGGGYYNPPSSGGSPPSTPVDPGTPSTPSTPSV---PS 120

Query: 121 TPSTPTIPTTPFTCNYWLNHPGLIWGVLGWWGTLGNAFGATNVPGFGTNLNLLQALSNTR 180
           TP+TPTIPT PFTC YWLNHPGLIWGVLGWWGTLGNAFGATNVPGFGTNLNLLQALSNTR
Sbjct: 121 TPTTPTIPTIPFTCTYWLNHPGLIWGVLGWWGTLGNAFGATNVPGFGTNLNLLQALSNTR 180

Query: 181 NDGYGALLREGTASYLNSLASNRFPYTTKQVRTSFVSALNSNKAAADQANTFKLANEGKI 240
           NDGYGALLREGTASYLNSLASNRFPYTTKQVRTSFVSAL+SNKAA +QANTFKLANEGKI
Sbjct: 181 NDGYGALLREGTASYLNSLASNRFPYTTKQVRTSFVSALSSNKAAGNQANTFKLANEGKI 240

Query: 241 KPRA 245
           KPRA
Sbjct: 241 KPRA 241

[Close]

BLAST of PI0019564 vs. NCBI nr
Match: XP_038900371.1 (protodermal factor 1-like [Benincasa hispida])

HSP 1 Score: 410.6 bits (1054), Expect = 9.4e-111
Identity = 223/247 (90.28%), Postives = 232/247 (93.93%), Query Frame = 0


Query: 1   MRSKQAPALLFTLLAGLLSQSLLIPVLSTSIADQKSYYSPP-DPHSGSPPSGSHGSPIPP 60
           MR+KQA  LLFTLLAGLLSQSLLIPV STSIADQKSYYSPP DPHSG+PP+GSH SPIPP
Sbjct: 1   MRTKQASVLLFTLLAGLLSQSLLIPVFSTSIADQKSYYSPPSDPHSGTPPTGSHSSPIPP 60

Query: 61  SHGNGGT-PHYSTPTPSTPSNPPSGGGGYYNPPSS-GGSPPSTPVDPGTPSTPSTPSVPS 120
           SHG GG+ PHYSTPTPSTPS PPS GGGYYNPPSS GGSPP+TPVDPGTPSTPSTP VPS
Sbjct: 61  SHGYGGSPPHYSTPTPSTPSKPPSSGGGYYNPPSSGGGSPPTTPVDPGTPSTPSTPGVPS 120

Query: 121 TPSTPSTPTIPTTPFTCNYWLNHPGLIWGVLGWWGTLGNAFGATNVPGFGTNLNLLQALS 180
           TPSTPS   IPTTPFTCNYWLNHPG+IWGVLGWWGTLGNAFGATNVPGFGTNLNLLQALS
Sbjct: 121 TPSTPS---IPTTPFTCNYWLNHPGMIWGVLGWWGTLGNAFGATNVPGFGTNLNLLQALS 180

Query: 181 NTRNDGYGALLREGTASYLNSLASNRFPYTTKQVRTSFVSALNSNKAAADQANTFKLANE 240
           NTR DG+GALLREGTASYLNSLASNRFP+TTKQVRTSFVSAL+SNKAAADQANTFKLANE
Sbjct: 181 NTRTDGFGALLREGTASYLNSLASNRFPFTTKQVRTSFVSALSSNKAAADQANTFKLANE 240

Query: 241 GKIKPRA 245
           GKIKPRA
Sbjct: 241 GKIKPRA 244

[Close]

BLAST of PI0019564 vs. NCBI nr
Match: XP_022970795.1 (protodermal factor 1-like [Cucurbita maxima])

HSP 1 Score: 395.2 bits (1014), Expect = 4.1e-106
Identity = 212/251 (84.46%), Postives = 227/251 (90.44%), Query Frame = 0


Query: 1   MRSKQAPALLFTLLAGLLSQSLLIPVLSTSIADQKSYYSPPDPHSGSPPSGSHGSPIPPS 60
           MR+KQA  LLFTLLAGLLSQSLLIPVLST+IADQKSYYSPPDPH+G+PP+GSH +PIPPS
Sbjct: 1   MRTKQASPLLFTLLAGLLSQSLLIPVLSTTIADQKSYYSPPDPHAGTPPTGSHSNPIPPS 60

Query: 61  HGNGGT-PHYSTPTPSTPSNPPSGGGGYYNPPSSGGSPPSTPVDPGTPSTPSTPSVPSTP 120
           HG GGT PHYSTPTPSTPS  PSG  GYYNPPSSGGS P+TPVDPGTPSTPSTPS PSTP
Sbjct: 61  HGYGGTPPHYSTPTPSTPSKSPSGRSGYYNPPSSGGSTPTTPVDPGTPSTPSTPSTPSTP 120

Query: 121 STPSTPT---------IPTTPFTCNYWLNHPGLIWGVLGWWGTLGNAFGATNVPGFGTNL 180
           STPSTP+          PTTPFTCN+WLNHPG+IWGVLGWWGTLGN FGATNVPGFGTNL
Sbjct: 121 STPSTPSTPSTPSTPGTPTTPFTCNFWLNHPGMIWGVLGWWGTLGNCFGATNVPGFGTNL 180

Query: 181 NLLQALSNTRNDGYGALLREGTASYLNSLASNRFPYTTKQVRTSFVSALNSNKAAADQAN 240
           NLLQALSNTR DG+GALLREGTASYLNSLASNRFP+TTKQV++SFVSALNSN+AAADQAN
Sbjct: 181 NLLQALSNTRADGFGALLREGTASYLNSLASNRFPFTTKQVQSSFVSALNSNRAAADQAN 240

Query: 241 TFKLANEGKIK 242
            FKLANEGKIK
Sbjct: 241 IFKLANEGKIK 251

[Close]

BLAST of PI0019564 vs. NCBI nr
Match: XP_022947015.1 (protodermal factor 1-like [Cucurbita moschata])

HSP 1 Score: 392.1 bits (1006), Expect = 3.5e-105
Identity = 211/248 (85.08%), Postives = 227/248 (91.53%), Query Frame = 0


Query: 1   MRSKQAPALLFTLLAGLLSQSLLIPVLSTSIADQKSYYSPPDPHSGSPPSGSHGSPIPPS 60
           MR+KQA  LLFTLLAGLLSQSLLIPVLST+IADQKSYYSPPDPH+G+PP+GSH +PIPPS
Sbjct: 1   MRTKQASPLLFTLLAGLLSQSLLIPVLSTTIADQKSYYSPPDPHAGTPPTGSHSNPIPPS 60

Query: 61  HGNGGT-PHYSTPTPSTPSNPPSGGGGYYNPPSSGGSPPSTPVDPGTPSTPSTPSVPSTP 120
           HG GGT PHYSTPTPSTP+  PSGG GYYNPP SGGS P+TPVDPGTPSTPSTPS PSTP
Sbjct: 61  HGYGGTPPHYSTPTPSTPTKSPSGGSGYYNPP-SGGSTPTTPVDPGTPSTPSTPSTPSTP 120

Query: 121 STPSTPT------IPTTPFTCNYWLNHPGLIWGVLGWWGTLGNAFGATNVPGFGTNLNLL 180
           STPSTP+       PTTPFTCN+WLNHPG+IWGVLGWWGTLGN FGATNVPGFGTNLNLL
Sbjct: 121 STPSTPSTPSTPGTPTTPFTCNFWLNHPGMIWGVLGWWGTLGNCFGATNVPGFGTNLNLL 180

Query: 181 QALSNTRNDGYGALLREGTASYLNSLASNRFPYTTKQVRTSFVSALNSNKAAADQANTFK 240
           QALSNTR DG+GALLREGTASYLNSLASNRFP+TTKQV++SFVSALNSN+AAADQAN FK
Sbjct: 181 QALSNTRADGFGALLREGTASYLNSLASNRFPFTTKQVQSSFVSALNSNRAAADQANIFK 240

Query: 241 LANEGKIK 242
           LANEGKIK
Sbjct: 241 LANEGKIK 247

[Close]

BLAST of PI0019564 vs. TAIR 10
Match: AT2G42840.1 (protodermal factor 1 )

HSP 1 Score: 186.4 bits (472), Expect = 2.7e-47
Identity = 141/300 (47.00%), Postives = 172/300 (57.33%), Query Frame = 0


Query: 10  LFTLLAGLLSQSLLIPVLSTSIADQKSYY-SPPD-----PHSGSPPSGSHGS-------- 69
           ++ L A LLSQ L   V S    D K+YY SPP      P S +PPS + GS        
Sbjct: 9   VWALFAALLSQQLFASVASVRFEDAKTYYLSPPSGSHGTPPSHTPPSSNCGSPPYDPSPS 68

Query: 70  ----PIPPSHG--------------------------NGGTP--------HYSTPTPSTP 129
               P PPSH                           N G+P        H STP+  TP
Sbjct: 69  TPSHPSPPSHTPTPSTPSHTPTPHTPSHTPTPHTPPCNCGSPPSHPSTPSHPSTPSHPTP 128

Query: 130 SNPPSGGGGYYNPPSSGG----SPPSTPVDPGTPSTPSTPSVP-STPSTPSTPTIPTTPF 189
           S+PPS  GGYY+ P        +PPS  VDPGTP    +P  P   P TP TP IP  PF
Sbjct: 129 SHPPS--GGYYSSPPPRTPVVVTPPSPIVDPGTPIIGGSPPTPIIDPGTPGTPFIP-APF 188

Query: 190 -----TCNYWLNHPGLIWGVLGWWGTLGNAFGA----TNVPGFGTNLNLLQALSNTRNDG 244
                TC+YW NHP LIWG+LGWWGT+G AFG     +++PGF  ++NLLQALSNTR+D 
Sbjct: 189 PPITGTCDYWRNHPTLIWGLLGWWGTVGGAFGTVSIPSSIPGFDPHMNLLQALSNTRSDP 248

The following BLAST results are available for this feature:

BLAST of PI0019564 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9S728	3.8e-46	47.00	Protodermal factor 1 OS=Arabidopsis thaliana OX=3702 GN=PDF1 PE=2 SV=1	[more]

BLAST of PI0019564 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UHX0	1.0e-118	95.49	Protodermal factor 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffo...	[more]
A0A1S3C4A9	1.0e-118	95.49	protodermal factor 1-like OS=Cucumis melo OX=3656 GN=LOC103496321 PE=4 SV=1	[more]
A0A0A0KF76	2.3e-118	93.85	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G178950 PE=4 SV=1	[more]
A0A6J1I3W1	2.0e-106	84.46	protodermal factor 1-like OS=Cucurbita maxima OX=3661 GN=LOC111469672 PE=4 SV=1	[more]
A0A6J1G5M6	1.7e-105	85.08	protodermal factor 1-like OS=Cucurbita moschata OX=3662 GN=LOC111451018 PE=4 SV=...	[more]

BLAST of PI0019564 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008456355.1	2.1e-118	95.49	PREDICTED: protodermal factor 1-like [Cucumis melo] >KAA0054578.1 protodermal fa...	[more]
XP_004143175.1	4.7e-118	93.85	protodermal factor 1 [Cucumis sativus] >KGN47037.1 hypothetical protein Csa_0206...	[more]
XP_038900371.1	9.4e-111	90.28	protodermal factor 1-like [Benincasa hispida]	[more]
XP_022970795.1	4.1e-106	84.46	protodermal factor 1-like [Cucurbita maxima]	[more]
XP_022947015.1	3.5e-105	85.08	protodermal factor 1-like [Cucurbita moschata]	[more]

BLAST of PI0019564 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G42840.1	2.7e-47	47.00	protodermal factor 1	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 94..126
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 56..72
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 36..127
None	No IPR available	PANTHER	PTHR33210:SF18	PROTODERMAL FACTOR 1	coord: 1..244
IPR039923	Protodermal factor 1	PANTHER	PTHR33210	PROTODERMAL FACTOR 1	coord: 1..244

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0019564.1	PI0019564.1	mRNA