PI0019559 (gene) Melon (PI 482460) v1

Overview
NamePI0019559
Typegene
OrganismCucumis metuliferus (Melon (PI 482460) v1)
DescriptionRetrotransposon gag protein
Locationchr05: 11995133 .. 12000863 (+)
RNA-Seq ExpressionPI0019559
SyntenyPI0019559
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAGCAACAAATTACTCATCTCACAACCGTTATTAGTAAGTTGGAAGGAAAAGGTAAACTTCTGGCCCAACCGGATCATGCAAATGTAAGTACCATCCCACTTAGAAGTGGTAAGACTCTTGAAACCCCTTCAAGTGAAGAAAAAAAGGTAACTTCCAACCCTATCCTTCTTGAAAATAATAGTGAGACTAAGGAAGAAAAAATTGAAACAAATGCTTTACCATCTAATTCTAATAAAGGTAAATCTCCTCTTTATGATTTTACTCCTTATGTACCTAAAGCTCATTTTCCTTCTAGGTTGGCTCCAAAGAAAAGGAATCACCAAAGGAAGAAGAACTCTTGGAAATGTTTAGAAAGGTGCAAATCAAATTGCCTTTACTTGATGCAATCCAACAAGTTCCAAGGTATGCAAAGTTTCTTAAGGAGTTGTGTACCAATAAGAGGAAAATCAAAGAAAAACCAATGGTAAGTCATAATGTTTCGACTCTTTTCAAAAACAATATTCCGGAAAAATGCAATGATCCCGGTATGTTTTCTCTTCCTTGTATAATAGGCAATAGATTAATTTCTCATGCAATGCTTGACTTAGGAGCATCCATAAATGTCATGCCATTTAATGTTTTCAAAGATCTAGAACTCAATAATTTGCAAAAAACTAGTGTATGCATACAACTAGCGGATAGATCTTTTATTTCACCGTTAGGAATAGTTGAAGATGTCCTTGTAAAAATTGACAAACTAATTTTTCCGGCGGACTTTTACATTTTAGAAATGAATAAAGAATGTAAAAAATCATCTCATTCTATTTTGTTAGGAAGACATTTTCTTAAAACCGCTAAAGCTATCATAAATGTTGATAAAGGCTCCCTAAGCGTAGAGTTTGATGGAGACATTGTTACATTCAATATTTTTTAACCTATAAAAAATACGGATAAATCTTTGTCTTTATATTCATTAGAATTGCATGATGAGATTAATAAGTTGTCTATGCAAAATGTACTCTTTGAAAAAGAAATTGTTGAAAATAAAAAGTTGCTAGAATCTAATATTGACTTTGCATTAGAAAAAAATAATTGTGACAATTTTTTCTCTTCTCCACAAAAATCAATAATTGAACTTAACTCTACCTTCTTTTTCCTCCTTGACTTTTTTAATAAAATTGCTTGTCTACTTGCTTCTACTAACCTTGTCAATTTAAAGCACAAGCAAGCAAAGACAAGAACAATAAAGATGAATGGAGGAACCAAACCCAAGATCATAGATCCGGGTTGAAAGAAACCAAAGCACGGTCGAGCATACGACCTTAAAAATTTGCGGTTCCTGGAGGCAGCCAGGCGTCAAAATTTTATCGCTTTCCGTCTTTACTTTTTTAAAATTCTGTCTTTTTAATTCTCTAGCTTAGTTTAGCATTTAATAAAATTGAGAGAAGTTTTTTTTTTGACATATAGGAAATTCCACTTAAAGAAATCAAGGGATAAAAAAGGAAGCAACCACTTCGTTTTGAAGCAAGCCTAAAGTTCTCAAAATTCAGGAGTTTTTCTGTTCCTCGGTATTATTCATACTTTTATTTTTTATGCTTTGAGGATCAAGCAACCTTTTAAGTGGGGGGTGGGTATAAATTTTTGCTTTACTTTACACTTGCATGCCATTTGGGTAGAATCCAAAAATGCATATCATGTATAAAAAATTATGCTCCAAAAAAAAAAAAAAAGTATGCATTTATTCAATGGAAGGCATTTTTTAATTCTTTCGAAGCATGTCTAGTGAGTCGAAATAGCAAAACTTAGATGTTTTATCTAAACATGACTTCCATTGAATAAATCTTCTTAAAAATCAACCTCCAATTTACCATTTGCTTCAATTGAACATTTAACTGAAATTCAAAGATTACTAAGTTGAATTGTTAAGGCATGAGTAACTTTCTTTGCATATTTGTTTGAAAACATCATAAAGAAAAAAGTTGCATGATTGTTTGAATTTCATTTTTGCAAAGTAATGCATGATTCCCTTGCATGATGAATGAATGAGTGTTGGCATATTTTTAATTTTTCTTAATCGGGACGATCAAGTCTTAAGTGGGGGGTTTTTTATAGAACCATTTTTACTAAAAATATCTAGCATAATTCTACCCATTATCATTCAAATACTAACTAATATGACATTTTTATGTAGAATATGATAGTAGACCCCAATAAAAACCCAACGACACTAAAATTAACTAAATCGGAGTTCTAACGAACAAAAACGGTAAAAAACAAGGTCAATGGCAAATCAGTAATTTCCCAAAAGAAATTCAAAGCAATTCCGCGCGGCAAAATTCCCAAGCCCACATGCTTCCTTCTCTACAAAGCTCATTTTGCTTCACATCAAGCCCAAATGCCAAGCCCATAATTTTGGCCCAAGGCCTAGTGTAACAAAATAACTACCAATTGGTAGTTATTTCTTGAAATAACTTCCCTTTTACTTCCTATAAATACCCCTTTGTAATTCATTTCAACAACACTTCACATTCCAAAATTAATATACAAAATCTATAGAATTTTGATTTCTCTACACTTTTTGCATATCAAATTTCTTTCCCTTACTCTCTTTAATTTTCCATAGAAATTTCCTTATTAAGTCTTTAGTCAATTTGCTACAAATGGCTAATTTCTCACCAATTTTCCACCAAGTTTCTATGGTGTAATTCTTTCAATAAGGACTAGAGGGCTAGTCTCACTTTCTTTGAGATGTAAGAGGTACTCTTTCTTCCCTTCTTTAATTTCTTTGATTGTTCACTTTCTTTCACAATTTTATTTTGAGTTTGAATGTTAAAATAAATTTCAAGGGTCCAAAACTTTCATCCAAATTCATGTCTTTAATTTTTAAAGCGCTGAGCTTATCATTAAATTGTGAATGCTTAATAGGCTAGATGAATTGGTAAAATTGTCTATAATTTCTACTAACCAATCTTGCATGTTAATAATTAAGTGAACTCTAATTTTGTTAAGGGTAGTGGCTGTCCTCCTTAACAAATCTTGAATGAATAATTTTTGTTTTAATTAGGACATGTTTTGATTGTTGAAACAATTCATGTTCTAATTAATTCCTCTTAAATTCTCATGCCCAATTCATTCTTGTCATTTCTCTAAAGAAGACTCAATTTTAATTTCTTTTCCTCTTACTTCCATGATAGGAAAAGTGACTAGCTAGTCCTCACAAGTCCTTATCTCATATCAATTGTTTACAAAAATTTGATAAAATTCTATTGATCATATTAATTACTTCCTTTACATTTTTTTTGCAATTTTTGTTTCTTACATGAACAATCTCCCCCCCCCCCCCCTATTACTAATAAGTTTGTTTGTATCTTGAAGCTTTCTTTTCATATTTGAACCTACGTAATTCATCTTGAAGTCGCAAGTTGCTCCCTTGGGTACGACAACCCTACTCTCTAATATTTTACCACCAAACTTACACCTCACATTCGCATACTGCCCATTGATTGCAGTCAACTTCATCTCGCCTCGCATCATTCTGTCAACCGCCAAATTAAGCCCAAAATCTAGCCCAAGGCCCAGTGTAACAAAATAACTGCTAATTGGCAGTTTTTTCTTGAAATAACTTCCATTTCATTCCATATAAATACCTCATTTGTAATCAACTTCATAATCATAAAATATATTCAATCAATAGAATTTTGATTTCTCTCTACACTTTTCATATCAAATTTTCTTCCTTTCTCTTTAATTGTCAATTTTCCATAGAAGTTCTCAATAAAATTTGAGTCATTTTGCTACAAAATGGCCAAATTTTCATCAATTTTCCACCAATCTTCCATGGAATAAGCTCTTCACTAAGGACTTGAGGGTTAGTACTACTATCCTTGAGATCTAAAAGGTATTTTTCTTTTCTTCTTTAATCATTTTGATTGATTTACTTTCATTTACGATTTCACTTTGAATTTGAATATTAAGAAAAGGTTTCTAGGGCCAAAAATTTGCATTTAGATTCATTTCTCTAATTCCCAAGTGCTAAACTTGATTTTAATTTGTAAATGTTTGATATGCTAATTCAATTAGTAGAATTGTCTTTAATTTTCACTAGTTGATCTTGCATATTAATCTTGAAGTAAACCTTAATTTTGCTAAGGGTAGTGGCTATCCTCTCCTTAGCAAATCTTGAATGAATGAAATTTGTTTTAATTGAAGTATGCTTTAATTGCTACAATGAATCATATTCTAGTTAATTCCAAATAATTTTTCCATGGTTTATTCATTCTTGTGCATCTTTAAGGAAGTCTTGATTGCAATTTCCTTCCCTTTTATTTCAATGATAGGAAAAGTATGCTAACTAACCCTTACAAAGTCCTTATTTCACCATTTGAAGTCCTCATCACTTTGATATAATTCAATTGATACATCTTGATTCCTCTCTTTTTTTTATAATTTGTTCCAAAATCAACAACCCCCCCCCCCCTTTTATTACTAATAATCTTGTTTACATCTTGAAGCTCCCACGATTCATTTGATCTTTTTTTCTTGCAACCTTGAAATCGCAAGTTGCTCTCTTGGGTACGACATCCCACCTACCACTATACTACAAACTCACTACAAACAACCGTGTGGTTCCATGTTTCCATCACATACCAATCCTGGAAGCATGTACCAAAGGATCTTAAGGATAAAATCTACAAACTAATTTGAGGTATTTTTTTTATTTCTAAGTTAATAATGAAGTATGTCTAAATATCTGACTACTGTTAATTGTGTGATCCCATGTAATAGGGTGGGTTCGAAGTAGATCCCAGATCGAAGAAGAGCATCCTACAGAATGCGAGTGTTTGCTACCGCCAATTCAAGTCATCAGTAACTACGAAGTATGTACTACCATTTAAGGACGACTTGAAAAAACTGAAAAGTCCACCTACGGATTACTCTTTTATCGAGCGAGGAACACATTTGTCTCTTACAATTTAAGTCAAGAATTTGAGGTAACTATAATGACCAAAACCTTTTTCCGTATGTGTCCTCACTTATGGTACATATGACTTTATGTGTGACACATAATGAAGATGATTAGCAGCAAGGGTCGGGAGTGACGAAAGAACAACAAATACAACCATAGAATAGTTAGTAAAGGTTATGCAAACCTTGTTGAAGAGATGGTAGGAATTTTGAATAGTACATATTGGTTTCGATAATACTAATCCTAATGTATTGTGACTGTGCTTTATTTTTGTTTATTTTTGTAAGAAATCGAGTACATCCAGTGGTCTAAGATTGATCGTGCTTTAGTATGGAAGAAAGCACGAACAAACAAAGACGAGGACATTCCTGACAAGGACATGAAAGAGGTGGTCGGTCGTATTGTAAGTACTTTCCTTAACGTTATTGTTAGTTTTTTTAATTGGTACTTACTAATACTACAACCTTTCCATGATAGGACGAACTACTTATTTCACGTACTGTGACTGATTTAATGGACAACTCAACTTCAGGTATACTATTACAAACTAGGAGGGGATGATCCATTGGGAAGGATTCGAGGGGTTGGTAAATGTCACACACGAAAAATACTTTCACACTGTTAGGGAGAAAAGAAAGAAAAAGGCAACCAAAGAAGAAGATTACGCCGAAGAACGAGCTAGAATGTCAACTCGAACATTGGAATTTGAAGCAGAATTAATGAACCATAGGAGGGTTCAAGAAATGCTAACGATTGGAGACGTTGTTTTAAGAGCAAGGTAA

mRNA sequence

ATGAAGCAACAAATTACTCATCTCACAACCGTTATTAGTAAGTTGGAAGGAAAAGGTAAACTTCTGGCCCAACCGGATCATGCAAATGTAAGTACCATCCCACTTAGAAGTGGTAAGACTCTTGAAACCCCTTCAAGTGAAGAAAAAAAGGTAACTTCCAACCCTATCCTTCTTGAAAATAATAGTGAGACTAAGGAAGAAAAAATTGAAACAAATGCTTTACCATCTAATTCTAATAAAGGGTGGGTTCGAAGTAGATCCCAGATCGAAGAAGAGCATCCTACAGAATGCGAGTGTTTGCTACCGCCAATTCAAGTCATCAAAATCGAGTACATCCAGTGGTCTAAGATTGATCGTGCTTTAGTATGGAAGAAAGCACGAACAAACAAAGACGAGGACATTCCTGACAAGGACATGAAAGAGGTGGTCGGTCGTATTGAGGGGATGATCCATTGGGAAGGATTCGAGGGGTTGGTAAATGTCACACACGAAAAATACTTTCACACTGTTAGGGAGAAAAGAAAGAAAAAGGCAACCAAAGAAGAAGATTACGCCGAAGAACGAGCTAGAATGTCAACTCGAACATTGGAATTTGAAGCAGAATTAATGAACCATAGGAGGGTTCAAGAAATGCTAACGATTGGAGACGTTGTTTTAAGAGCAAGGTAA

Coding sequence (CDS)

ATGAAGCAACAAATTACTCATCTCACAACCGTTATTAGTAAGTTGGAAGGAAAAGGTAAACTTCTGGCCCAACCGGATCATGCAAATGTAAGTACCATCCCACTTAGAAGTGGTAAGACTCTTGAAACCCCTTCAAGTGAAGAAAAAAAGGTAACTTCCAACCCTATCCTTCTTGAAAATAATAGTGAGACTAAGGAAGAAAAAATTGAAACAAATGCTTTACCATCTAATTCTAATAAAGGGTGGGTTCGAAGTAGATCCCAGATCGAAGAAGAGCATCCTACAGAATGCGAGTGTTTGCTACCGCCAATTCAAGTCATCAAAATCGAGTACATCCAGTGGTCTAAGATTGATCGTGCTTTAGTATGGAAGAAAGCACGAACAAACAAAGACGAGGACATTCCTGACAAGGACATGAAAGAGGTGGTCGGTCGTATTGAGGGGATGATCCATTGGGAAGGATTCGAGGGGTTGGTAAATGTCACACACGAAAAATACTTTCACACTGTTAGGGAGAAAAGAAAGAAAAAGGCAACCAAAGAAGAAGATTACGCCGAAGAACGAGCTAGAATGTCAACTCGAACATTGGAATTTGAAGCAGAATTAATGAACCATAGGAGGGTTCAAGAAATGCTAACGATTGGAGACGTTGTTTTAAGAGCAAGGTAA

Protein sequence

MKQQITHLTTVISKLEGKGKLLAQPDHANVSTIPLRSGKTLETPSSEEKKVTSNPILLENNSETKEEKIETNALPSNSNKGWVRSRSQIEEEHPTECECLLPPIQVIKIEYIQWSKIDRALVWKKARTNKDEDIPDKDMKEVVGRIEGMIHWEGFEGLVNVTHEKYFHTVREKRKKKATKEEDYAEERARMSTRTLEFEAELMNHRRVQEMLTIGDVVLRAR
Homology
[Close]
BLAST of PI0019559 vs. ExPASy TrEMBL
Match: A0A5D3C4I5 (Retrotransposon gag protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold572G00210 PE=4 SV=1)

HSP 1 Score: 107.1 bits (266), Expect = 9.8e-20
Identity = 54/78 (69.23%), Postives = 66/78 (84.62%), Query Frame = 0 

Query: 1   MKQQITHLTTVISKLEGKGKLLAQPDHANVSTIPLRSGKTLETPSSEEKKVTSNPILLEN 60
           MKQQ+T LTT ISK++GKGKL  QPDHANVS I LRSGK L+TP+++EKKVTS P+ L +
Sbjct: 126 MKQQMTQLTTAISKMDGKGKLSTQPDHANVSAISLRSGKILDTPTTKEKKVTSKPLPLNS 185

Query: 61  NSETKEEKIETNALPSNS 79
            +E+KEEK+ETN LPSNS
Sbjct: 186 KNESKEEKVETNPLPSNS 203

[Close]
BLAST of PI0019559 vs. ExPASy TrEMBL
Match: A0A5D3DIP6 (Retrotrans_gag domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold605G00340 PE=4 SV=1)

HSP 1 Score: 107.1 bits (266), Expect = 9.8e-20
Identity = 56/78 (71.79%), Postives = 65/78 (83.33%), Query Frame = 0 

Query: 1   MKQQITHLTTVISKLEGKGKLLAQPDHANVSTIPLRSGKTLETPSSEEKKVTSNPILLEN 60
           MKQQIT LTT ISK+EGKGKLLAQ DHANVS I LRSGK L TP+++EKKVTS P+ L +
Sbjct: 325 MKQQITQLTTAISKMEGKGKLLAQQDHANVSAISLRSGKILNTPTTKEKKVTSEPLPLNS 384

Query: 61  NSETKEEKIETNALPSNS 79
            +E+KEEK+ETN  PSNS
Sbjct: 385 KNESKEEKVETNPSPSNS 402

[Close]
BLAST of PI0019559 vs. ExPASy TrEMBL
Match: A0A5D3DS57 (Retrotransposon gag protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold313G002030 PE=4 SV=1)

HSP 1 Score: 105.9 bits (263), Expect = 2.2e-19
Identity = 54/78 (69.23%), Postives = 66/78 (84.62%), Query Frame = 0 

Query: 1   MKQQITHLTTVISKLEGKGKLLAQPDHANVSTIPLRSGKTLETPSSEEKKVTSNPILLEN 60
           MKQQ+T LTT ISK++GKGKL AQPDHANVS I LRSGK L+TP+++EKKVTS P+ L +
Sbjct: 228 MKQQMTQLTTAISKMDGKGKLPAQPDHANVSAISLRSGKILDTPTTKEKKVTSKPLPLNS 287

Query: 61  NSETKEEKIETNALPSNS 79
            +E+KEEK+ETN  PSNS
Sbjct: 288 KNESKEEKVETNPSPSNS 305

[Close]
BLAST of PI0019559 vs. ExPASy TrEMBL
Match: A0A5A7V594 (Retrotransposon gag protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold154G001880 PE=4 SV=1)

HSP 1 Score: 105.9 bits (263), Expect = 2.2e-19
Identity = 54/78 (69.23%), Postives = 66/78 (84.62%), Query Frame = 0 

Query: 1   MKQQITHLTTVISKLEGKGKLLAQPDHANVSTIPLRSGKTLETPSSEEKKVTSNPILLEN 60
           MKQQ+T LTT ISK++GKGKL AQPDHANVS I LRSGK L+TP+++EKKVTS P+ L +
Sbjct: 228 MKQQMTQLTTAISKMDGKGKLPAQPDHANVSAISLRSGKILDTPTTKEKKVTSKPLPLNS 287

Query: 61  NSETKEEKIETNALPSNS 79
            +E+KEEK+ETN  PSNS
Sbjct: 288 KNESKEEKVETNPSPSNS 305

[Close]
BLAST of PI0019559 vs. ExPASy TrEMBL
Match: A0A5D3DCG3 (Retrotransposon gag protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold860G00100 PE=4 SV=1)

HSP 1 Score: 104.8 bits (260), Expect = 4.9e-19
Identity = 55/78 (70.51%), Postives = 66/78 (84.62%), Query Frame = 0 

Query: 1   MKQQITHLTTVISKLEGKGKLLAQPDHANVSTIPLRSGKTLETPSSEEKKVTSNPILLEN 60
           MKQQ+T LTTVISK++GKGKLLAQPDHANVS I LRS K L+TP+++EKKVTS P+ L +
Sbjct: 103 MKQQMTQLTTVISKMDGKGKLLAQPDHANVSVISLRSDKILDTPTTKEKKVTSKPLPLNS 162

Query: 61  NSETKEEKIETNALPSNS 79
            +E+KEEK ETN  PSNS
Sbjct: 163 KNESKEEKGETNPSPSNS 180

[Close]
BLAST of PI0019559 vs. NCBI nr
Match: KAA0025369.1 (uncharacterized protein E6C27_scaffold1204G00530 [Cucumis melo var. makuwa] >TYK23432.1 uncharacterized protein E5676_scaffold605G00340 [Cucumis melo var. makuwa])

HSP 1 Score: 107.1 bits (266), Expect = 2.0e-19
Identity = 56/78 (71.79%), Postives = 65/78 (83.33%), Query Frame = 0 

Query: 1   MKQQITHLTTVISKLEGKGKLLAQPDHANVSTIPLRSGKTLETPSSEEKKVTSNPILLEN 60
           MKQQIT LTT ISK+EGKGKLLAQ DHANVS I LRSGK L TP+++EKKVTS P+ L +
Sbjct: 325 MKQQITQLTTAISKMEGKGKLLAQQDHANVSAISLRSGKILNTPTTKEKKVTSEPLPLNS 384

Query: 61  NSETKEEKIETNALPSNS 79
            +E+KEEK+ETN  PSNS
Sbjct: 385 KNESKEEKVETNPSPSNS 402

[Close]
BLAST of PI0019559 vs. NCBI nr
Match: KAA0066512.1 (retrotransposon gag protein [Cucumis melo var. makuwa] >TYK06128.1 retrotransposon gag protein [Cucumis melo var. makuwa])

HSP 1 Score: 107.1 bits (266), Expect = 2.0e-19
Identity = 54/78 (69.23%), Postives = 66/78 (84.62%), Query Frame = 0 

Query: 1   MKQQITHLTTVISKLEGKGKLLAQPDHANVSTIPLRSGKTLETPSSEEKKVTSNPILLEN 60
           MKQQ+T LTT ISK++GKGKL  QPDHANVS I LRSGK L+TP+++EKKVTS P+ L +
Sbjct: 126 MKQQMTQLTTAISKMDGKGKLSTQPDHANVSAISLRSGKILDTPTTKEKKVTSKPLPLNS 185

Query: 61  NSETKEEKIETNALPSNS 79
            +E+KEEK+ETN LPSNS
Sbjct: 186 KNESKEEKVETNPLPSNS 203

[Close]
BLAST of PI0019559 vs. NCBI nr
Match: TYK26581.1 (retrotransposon gag protein [Cucumis melo var. makuwa])

HSP 1 Score: 105.9 bits (263), Expect = 4.5e-19
Identity = 54/78 (69.23%), Postives = 66/78 (84.62%), Query Frame = 0 

Query: 1   MKQQITHLTTVISKLEGKGKLLAQPDHANVSTIPLRSGKTLETPSSEEKKVTSNPILLEN 60
           MKQQ+T LTT ISK++GKGKL AQPDHANVS I LRSGK L+TP+++EKKVTS P+ L +
Sbjct: 228 MKQQMTQLTTAISKMDGKGKLPAQPDHANVSAISLRSGKILDTPTTKEKKVTSKPLPLNS 287

Query: 61  NSETKEEKIETNALPSNS 79
            +E+KEEK+ETN  PSNS
Sbjct: 288 KNESKEEKVETNPSPSNS 305

[Close]
BLAST of PI0019559 vs. NCBI nr
Match: KAA0062400.1 (retrotransposon gag protein [Cucumis melo var. makuwa])

HSP 1 Score: 105.9 bits (263), Expect = 4.5e-19
Identity = 54/78 (69.23%), Postives = 66/78 (84.62%), Query Frame = 0 

Query: 1   MKQQITHLTTVISKLEGKGKLLAQPDHANVSTIPLRSGKTLETPSSEEKKVTSNPILLEN 60
           MKQQ+T LTT ISK++GKGKL AQPDHANVS I LRSGK L+TP+++EKKVTS P+ L +
Sbjct: 228 MKQQMTQLTTAISKMDGKGKLPAQPDHANVSAISLRSGKILDTPTTKEKKVTSKPLPLNS 287

Query: 61  NSETKEEKIETNALPSNS 79
            +E+KEEK+ETN  PSNS
Sbjct: 288 KNESKEEKVETNPSPSNS 305

[Close]
BLAST of PI0019559 vs. NCBI nr
Match: XP_016902871.1 (PREDICTED: uncharacterized protein LOC107991910 [Cucumis melo])

HSP 1 Score: 104.8 bits (260), Expect = 1.0e-18
Identity = 55/78 (70.51%), Postives = 66/78 (84.62%), Query Frame = 0 

Query: 1   MKQQITHLTTVISKLEGKGKLLAQPDHANVSTIPLRSGKTLETPSSEEKKVTSNPILLEN 60
           MKQQ+T LTTVISK++GKGKLLAQPDHANVS I LRS K L+TP+++EKKVTS P+ L +
Sbjct: 103 MKQQMTQLTTVISKMDGKGKLLAQPDHANVSVISLRSDKILDTPTTKEKKVTSKPLPLNS 162

Query: 61  NSETKEEKIETNALPSNS 79
            +E+KEEK ETN  PSNS
Sbjct: 163 KNESKEEKGETNPSPSNS 180

The following BLAST results are available for this feature:
BLAST of PI0019559 vs.
Match NameE-valueIdentityDescription
BLAST of PI0019559 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5D3C4I59.8e-2069.23Retrotransposon gag protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaf... [more]
A0A5D3DIP69.8e-2071.79Retrotrans_gag domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 ... [more]
A0A5D3DS572.2e-1969.23Retrotransposon gag protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaf... [more]
A0A5A7V5942.2e-1969.23Retrotransposon gag protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaf... [more]
A0A5D3DCG34.9e-1970.51Retrotransposon gag protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaf... [more]
BLAST of PI0019559 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0025369.12.0e-1971.79uncharacterized protein E6C27_scaffold1204G00530 [Cucumis melo var. makuwa] >TYK... [more]
KAA0066512.12.0e-1969.23retrotransposon gag protein [Cucumis melo var. makuwa] >TYK06128.1 retrotranspos... [more]
TYK26581.14.5e-1969.23retrotransposon gag protein [Cucumis melo var. makuwa][more]
KAA0062400.14.5e-1969.23retrotransposon gag protein [Cucumis melo var. makuwa][more]
XP_016902871.11.0e-1870.51PREDICTED: uncharacterized protein LOC107991910 [Cucumis melo][more]
BLAST of PI0019559 vs. NCBI nr
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 170..190
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 36..55

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
PI0019559.1PI0019559.1mRNA