PI0019527 (gene) Melon (PI 482460) v1

Overview


Name	PI0019527
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	RNA exonuclease 4
Location	chr07: 21764186 .. 21767270 (-)
RNA-Seq Expression	PI0019527
Synteny	PI0019527

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAATCTCAGCTCAAGAAGAACCCTAAACCCAAATTACTCAACCCCAATTGGGCACTACTCCAACAAGTACTTCTTCTTCTTCCCTCCATTCCTCGTTTTCCCATCTCTTTCCATCACTGATTTCTATCTGTTTTGATCCTGCAGAAGCTGAAACCCCATGGTTCAAATCATTCAAAGTCCTCTACTATCCCGAAATCCGAAGCTTCATCGAAGACCGTTTTAGGTAAGAGTTCTTCTTCTACCCCTCGGTTCAAAGTTGCTTACCATTTACAGATCATTATGAAATTTCATGCTCTTGTTCGATGAACTTTGTCTTACCTATTATCTTTACTTCTATGTGATTGTATGAGCCTCACTAGTTCAAACAAAGAAATTGAGAAGTGGGTTTTGCTGCAATCGTCGCTTGAGATAGTGTGCTTTTGATTTTAGGAACTTGGGTTTCCTTATTATTTTATTTGGAAGTTCTTAGTTCATGAAATGTTTAGAATAACCAAACAAGTTCTTTTTTTGGTTACATTCTGATGAATCCACGTAGCTTTTGTTGTCTTAATGTAGTGATTTAGTTAACTGGTGCGACATGGGTTTACAGGGAAACGCAAGGAAAGATCTGATGTGGAGTCAAATCATTCCCAGAAGAATATTCTCATTCCAGTGAATGATGACTTTAGGTAATCTTATAGAATTATTTTTATTACTTGAAGAACATTGTAAATTGTTGTCCAGTTACTTTAGATGCAAATTGAATATATTTTCTAATTGTTTTACTTAATCACCAACGACTGGAGTGGTATTGATAAATGCTTAATGATAATTCAATCCTCGATAATCATAAGTAGCAAGTTTATGTGACTAAATTATGCTATAAAATTATGATTGCACTTGGCATTAGACATATCAAGTTCTTTGTATGGCGTCTAATCCTGTAGTATTGGCGAATGGCAAATTGTGAAATACATTGTAGTACTACATCTTCTCATAGTTCAAAGATTTAACTTTTAAGTTCTTCATTTCTCCAAAAAAAAAAAAAAAAAAAAAAAAGAAGAAGAAAGAGAAAAAGAGAAAGCTCAAAGTTACTTGATTCCCTGCTTTTGTAATCTTTGCCAAAAAATTTGAATTTTATACTCTGTCTGAAGATAGTACTGACTTTATACTTTTGCCAGTCTTACAGATGAAGTAGCTATGGATTGTGAAATGGTTGGCGTGGGTCAAGGTAACAAAGTGCCCTTGGACGAGTTACACTGGTATTCATTCCTTTTTGAATTTGATCACCTGTTATTCGTGTCCATGTATTTGGTTTTTTTGCATACACATGGAGAGAGAGCCTCTTTACACCTCTTCAATCAGGAAAGAGGATGGGTTATTATTATTGTTTTTTTTTTTTTTTGGAGGGGTTGATAGTTCAACTTGCATTCTCATAACTAGCAGCTTCTTAGAGCACCAAAGCATGACGTTTAACTTTTCTATATTATTAGTTGCTAACTGTACTGCCAATTAATGGCAGGTAAACAAATGGGGGAATGTTATATACGATGAGTTTGTACGCCCGATAGAGCGTGTGGTTGACTTTCGGACCCAAATTAGTGGCATAAGACCCTGCGACTTGAAGAAAGGTCGCGTTTGTTTTCCTTCTTTCCTTTAATATGTATATTTTGTTGTTTACTCAGCTGTTTCCTTAAAGAGTTTTAACGATGTTGAAGACTCTAATTTCTAGCTATGTACGATTGTACCATTATATCTGTTAGAAAATTAATGCTTTGCAGTAATATACAAGTGGAATTTTGAGTAGGTAGATTAATGATGGTCTGGGATTTGAATTTTTTAGGTTTCTTGCTCCCAATCAGTCTTTTGTCCTCCGATTTCCAGTTAGGATTTATATTCGTTACGTTAATTGAGGTTTTATAAATGTCATTAACTTATTGATTTAATTTTTTTAATTTCAGCTAAGGATTTTCCAACTGTCCAGAAGAGAGTGGCAGAGTTGATTAAAGGAAAGATTCTTGTTGGCCATGCCTTGCGTAATGATCTTAAGGTATCTAGATTAAAATGGTTTGAAGTATAAACCTGAAAAGTTATAGTAAAGTTCTCTATTGATTTGACAGGCATTACTCTTGAGTCATCCCAAGAAGGACGTGAGAGACACCTGCGAGTACCAATTCTTTCAGAAGTAATAATTTGCTCCCCATTGCACTTCATAACTTCCACCTTTTAAGTTCTACTTTGAAATTCATCCATTCTCAATTGTTTGATGAAACAGGGAAGGATCTAAAAGAGCTCTCCGCCATCTTGCAGCCGAGTTTCTTGGTGTTGAGATCCAAAATGGGGAGCACTGTCCTGTAAGTTTTCTGATCTTTTCGTCTTTTATATTTCTAGTCTCTTTTGTTAAACTGGAGAGAAATCGGGGTATTGATCATAAAACCACTTGGGTTGACCTAATGGTCAATAAGGGTCATGAAAATAATGAAGGGACTTAAATAGAGCGGGTTCAAGCCACTTCTAATTTTATATTCTATGAGTTTTCTTGAATAGCCTAATATTATAGAGTTGAGAGTTCAACACTTATCTCTCGAGAAACTGACATAAACTTGAAAGTTTAAGAATTAAACTTGTAATTTAACCGAAAAAATTTACGTTACCCCTGATATTTTATGGTAGTTACAACTTACAAGGGTCCCACTTAACCACCATGTTACAACTTCCAAGAGTCCTACTACACAACCATATTACTTGGATTCATCCTAAGATTCATGATCTCCCATCTTGGTGCAAATTAAGTACCATATCTGACCTCAATTTGCAAATTCTGGGAATCCATATATATCATTCTGGCTTCCTCTATTGAATTTTGTCCATCTGGTATCTAATATTATTGATATGTTTTCATGGGACATTTTGTTTTGATAAGTTTGTGAAATTTTGATGTAACTTTCTTTTGTAGGTAGAAGATGCTCGTTCTGCAATGCTGCTCTATCAGAAGAAAAGAAAAGAGTGGGAAAAGAGTGTTAAAGCTGAACTAAAGCTTAAATTGAAGCAGAAAAAACGCAAGCCAAGGAAGAAATCCAAGGATGGAGGAGGTTTTGAATGA

mRNA sequence

ATGGAATCTCAGCTCAAGAAGAACCCTAAACCCAAATTACTCAACCCCAATTGGGCACTACTCCAACAAAAGCTGAAACCCCATGGTTCAAATCATTCAAAGTCCTCTACTATCCCGAAATCCGAAGCTTCATCGAAGACCGTTTTAGGGAAACGCAAGGAAAGATCTGATGTGGAGTCAAATCATTCCCAGAAGAATATTCTCATTCCAGTGAATGATGACTTTAGTCTTACAGATGAAGTAGCTATGGATTGTGAAATGGTTGGCGTGGGTCAAGGTAACAAAGTAAACAAATGGGGGAATGTTATATACGATGAGTTTGTACGCCCGATAGAGCGTGTGGTTGACTTTCGGACCCAAATTAGTGGCATAAGACCCTGCGACTTGAAGAAAGCTAAGGATTTTCCAACTGTCCAGAAGAGAGTGGCAGAGTTGATTAAAGGAAAGATTCTTGTTGGCCATGCCTTGCGTAATGATCTTAAGGCATTACTCTTGAGTCATCCCAAGAAGGACGTGAGAGACACCTGCGAGTACCAATTCTTTCAGAAGGAAGGATCTAAAAGAGCTCTCCGCCATCTTGCAGCCGAGTTTCTTGGTGTTGAGATCCAAAATGGGGAGCACTGTCCTGTAGAAGATGCTCGTTCTGCAATGCTGCTCTATCAGAAGAAAAGAAAAGAGTGGGAAAAGAGTGTTAAAGCTGAACTAAAGCTTAAATTGAAGCAGAAAAAACGCAAGCCAAGGAAGAAATCCAAGGATGGAGGAGGTTTTGAATGA

Coding sequence (CDS)

ATGGAATCTCAGCTCAAGAAGAACCCTAAACCCAAATTACTCAACCCCAATTGGGCACTACTCCAACAAAAGCTGAAACCCCATGGTTCAAATCATTCAAAGTCCTCTACTATCCCGAAATCCGAAGCTTCATCGAAGACCGTTTTAGGGAAACGCAAGGAAAGATCTGATGTGGAGTCAAATCATTCCCAGAAGAATATTCTCATTCCAGTGAATGATGACTTTAGTCTTACAGATGAAGTAGCTATGGATTGTGAAATGGTTGGCGTGGGTCAAGGTAACAAAGTAAACAAATGGGGGAATGTTATATACGATGAGTTTGTACGCCCGATAGAGCGTGTGGTTGACTTTCGGACCCAAATTAGTGGCATAAGACCCTGCGACTTGAAGAAAGCTAAGGATTTTCCAACTGTCCAGAAGAGAGTGGCAGAGTTGATTAAAGGAAAGATTCTTGTTGGCCATGCCTTGCGTAATGATCTTAAGGCATTACTCTTGAGTCATCCCAAGAAGGACGTGAGAGACACCTGCGAGTACCAATTCTTTCAGAAGGAAGGATCTAAAAGAGCTCTCCGCCATCTTGCAGCCGAGTTTCTTGGTGTTGAGATCCAAAATGGGGAGCACTGTCCTGTAGAAGATGCTCGTTCTGCAATGCTGCTCTATCAGAAGAAAAGAAAAGAGTGGGAAAAGAGTGTTAAAGCTGAACTAAAGCTTAAATTGAAGCAGAAAAAACGCAAGCCAAGGAAGAAATCCAAGGATGGAGGAGGTTTTGAATGA

Protein sequence

MESQLKKNPKPKLLNPNWALLQQKLKPHGSNHSKSSTIPKSEASSKTVLGKRKERSDVESNHSQKNILIPVNDDFSLTDEVAMDCEMVGVGQGNKVNKWGNVIYDEFVRPIERVVDFRTQISGIRPCDLKKAKDFPTVQKRVAELIKGKILVGHALRNDLKALLLSHPKKDVRDTCEYQFFQKEGSKRALRHLAAEFLGVEIQNGEHCPVEDARSAMLLYQKKRKEWEKSVKAELKLKLKQKKRKPRKKSKDGGGFE

Homology

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BLAST of PI0019527 vs. ExPASy Swiss-Prot
Match: Q91560 (RNA exonuclease 4 OS=Xenopus laevis OX=8355 GN=rexo4 PE=2 SV=2)

HSP 1 Score: 163.7 bits (413), Expect = 2.8e-39
Identity = 85/185 (45.95%), Postives = 126/185 (68.11%), Query Frame = 0


Query: 77  LTDEVAMDCEMVGVGQGNK---------VNKWGNVIYDEFVRPIERVVDFRTQISGIRPC 136
           LT  VAMDCEMVGVG   +         VN +G  +YD++V+P ERV D+RT +SGIRP 
Sbjct: 231 LTRTVAMDCEMVGVGMDGEESILARVSIVNLFGKCVYDKYVKPTERVTDYRTAVSGIRPE 290

Query: 137 DLKKAKDFPTVQKRVAELIKGKILVGHALRNDLKALLLSHPKKDVRDTCEYQFFQK--EG 196
           D+KK + F  VQK V+E+++G+ LVGHA+ NDLK L L HPKK +RDT +Y+ F++  + 
Sbjct: 291 DVKKGEPFKVVQKEVSEILRGRTLVGHAVHNDLKILFLDHPKKAIRDTQKYKPFKQKVKS 350

Query: 197 SKRALRHLAAEFLGVEIQNGEHCPVEDARSAMLLYQKKRKEWEKSVKAELK--LKLKQKK 249
            + +L+ L  + L V++Q GEHC V+DA++AM LY  ++K WE ++KA+    + + +K 
Sbjct: 351 GRPSLKLLCEKILNVKVQTGEHCSVQDAQAAMRLYTMEKKSWEVAIKAKYTGVMPVDRKS 410

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BLAST of PI0019527 vs. ExPASy Swiss-Prot
Match: Q9GZR2 (RNA exonuclease 4 OS=Homo sapiens OX=9606 GN=REXO4 PE=1 SV=2)

HSP 1 Score: 162.9 bits (411), Expect = 4.7e-39
Identity = 80/167 (47.90%), Postives = 115/167 (68.86%), Query Frame = 0


Query: 77  LTDEVAMDCEMVGVGQGNK---------VNKWGNVIYDEFVRPIERVVDFRTQISGIRPC 136
           LT  +A+DCEMVGVG   +         VN++G  +YD++V+P E V D+RT +SGIRP 
Sbjct: 240 LTRALALDCEMVGVGPKGEESMAARVSIVNQYGKCVYDKYVKPTEPVTDYRTAVSGIRPE 299

Query: 137 DLKKAKDFPTVQKRVAELIKGKILVGHALRNDLKALLLSHPKKDVRDTCEYQFF--QKEG 196
           +LK+ ++   VQK VAE++KG+ILVGHAL NDLK L L HPKK +RDT +Y+ F  Q + 
Sbjct: 300 NLKQGEELEVVQKEVAEMLKGRILVGHALHNDLKVLFLDHPKKKIRDTQKYKPFKSQVKS 359

Query: 197 SKRALRHLAAEFLGVEIQNGEHCPVEDARSAMLLYQKKRKEWEKSVK 233
            + +LR L+ + LG+++Q  EHC ++DA++AM LY   +KEWE   +
Sbjct: 360 GRPSLRLLSEKILGLQVQQAEHCSIQDAQAAMRLYVMVKKEWESMAR 406

[Close]

BLAST of PI0019527 vs. ExPASy Swiss-Prot
Match: Q6PAQ4 (RNA exonuclease 4 OS=Mus musculus OX=10090 GN=Rexo4 PE=2 SV=2)

HSP 1 Score: 162.5 bits (410), Expect = 6.2e-39
Identity = 77/165 (46.67%), Postives = 115/165 (69.70%), Query Frame = 0


Query: 77  LTDEVAMDCEMVGVGQGNK---------VNKWGNVIYDEFVRPIERVVDFRTQISGIRPC 136
           LT  +A+DCEMVGVG   +         VN++G  +YD++V+P E V D+RT +SGIRP 
Sbjct: 250 LTKALALDCEMVGVGPKGEESIAARVSIVNQYGKCVYDKYVKPTEPVTDYRTAVSGIRPE 309

Query: 137 DLKKAKDFPTVQKRVAELIKGKILVGHALRNDLKALLLSHPKKDVRDTCEYQFFQK--EG 196
           +LK+ ++F  V+K VAE++KG+ILVGHAL NDLK L L HPKK +RDT +++ F+   + 
Sbjct: 310 NLKQGEEFEVVKKEVAEMLKGRILVGHALHNDLKVLFLDHPKKKIRDTQKFKPFRSRVKS 369

Query: 197 SKRALRHLAAEFLGVEIQNGEHCPVEDARSAMLLYQKKRKEWEKS 231
            + +L+ L+ + LG+ +Q  EHC ++DA++AM LY   ++EWE S
Sbjct: 370 GRPSLKRLSEKILGIRVQQAEHCSIQDAQAAMRLYVMVKREWESS 414

[Close]

BLAST of PI0019527 vs. ExPASy Swiss-Prot
Match: Q6DEW6 (RNA exonuclease 4 OS=Xenopus tropicalis OX=8364 GN=rexo4 PE=2 SV=1)

HSP 1 Score: 160.2 bits (404), Expect = 3.1e-38
Identity = 85/183 (46.45%), Postives = 121/183 (66.12%), Query Frame = 0


Query: 77  LTDEVAMDCEMVGVGQGNK---------VNKWGNVIYDEFVRPIERVVDFRTQISGIRPC 136
           LT  VAMDCEMVGVG   +         VN +G  +YD++VRP ERV D+RT +SGIRP 
Sbjct: 225 LTRTVAMDCEMVGVGLDGEESMLARVSIVNLFGKCVYDKYVRPTERVTDYRTAVSGIRPD 284

Query: 137 DLKKAKDFPTVQKRVAELIKGKILVGHALRNDLKALLLSHPKKDVRDTCEYQFFQK--EG 196
           D+K  + F  VQ  VAE+++G+ LVGHA+ NDLK L L HPKK +RDT +Y+ F++  + 
Sbjct: 285 DIKNGEAFKDVQAEVAEILRGRTLVGHAVHNDLKILFLDHPKKAIRDTQKYKPFKEKVKS 344

Query: 197 SKRALRHLAAEFLGVEIQNGEHCPVEDARSAMLLYQKKRKEWEKSVKAELKLKLKQKKRK 249
            + +L+ L  + L V++Q GEHC V+DA++AM LY  ++K WE ++KA+       K + 
Sbjct: 345 GRPSLKLLCEKILNVKVQTGEHCSVQDAQAAMRLYTMEKKCWEAAIKAKYAGVTAAKAKG 404

[Close]

BLAST of PI0019527 vs. ExPASy Swiss-Prot
Match: Q4WHF8 (RNA exonuclease 4 OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) OX=330879 GN=rex4 PE=3 SV=1)

HSP 1 Score: 147.9 bits (372), Expect = 1.6e-34
Identity = 103/251 (41.04%), Postives = 144/251 (57.37%), Query Frame = 0


Query: 28  HGSNHSKSSTIPKSEASSKTVLGKRKERSDVESNHSQKNILIPVNDDFSLTDE----VAM 87
           HG + S    + K+  S K+      E+S  ES  ++      VN+  S T E    VAM
Sbjct: 67  HGGDESAQEPMVKT-ISHKSSTATISEQSRTESKPTK------VNEGRSPTAEIGKYVAM 126

Query: 88  DCEMVGVGQG----------NKVNKWGNVIYDEFVRPIERVVDFRTQISGIRPCDLKKAK 147
           DCEMVGVG            + VN  G  +YD +VRP E + D+RT +SGI P  + +A+
Sbjct: 127 DCEMVGVGPNPDNDSALARVSIVNFNGEQVYDSYVRPKEMITDWRTHVSGISPKHMAEAR 186

Query: 148 DFPTVQKRVAELIKGKILVGHALRNDLKALLLSHPKKDVRDTCEYQFFQK--EGSKRALR 207
               VQK VAE++ G+ILVGHA+ NDL ALLL HPK+D+RDT ++  ++K   G    L+
Sbjct: 187 SLEQVQKDVAEILDGRILVGHAVSNDLDALLLGHPKRDIRDTSKHPPYRKIAGGGSPRLK 246

Query: 208 HLAAEFLGVEIQNGEHCPVEDARSAMLLYQKKR--------KEWEKSVKAELK-----LK 250
            LA+EFLG+ IQ+G H  VEDA++ MLLY++ +        K+W   V  + K      K
Sbjct: 247 ILASEFLGLNIQDGAHSSVEDAKATMLLYRRDKEAFEREHLKKWPIRVVVDKKENGEDQK 306

[Close]

BLAST of PI0019527 vs. ExPASy TrEMBL
Match: E5GBF8 (RNA exonuclease 4 OS=Cucumis melo subsp. melo OX=412675 PE=3 SV=1)

HSP 1 Score: 479.6 bits (1233), Expect = 8.4e-132
Identity = 247/265 (93.21%), Postives = 252/265 (95.09%), Query Frame = 0


Query: 1   MESQLKKNPKPKLLNPNWALLQQKLKPHGSNHSKSSTIPKSEASSKTVLGKRKERSDVES 60
           M SQLKKNPKPKLLNPNWA+LQQKLKPHGSNHSK+ST+PKSEASSKT+LGKRKERSDVES
Sbjct: 1   MTSQLKKNPKPKLLNPNWAILQQKLKPHGSNHSKASTVPKSEASSKTLLGKRKERSDVES 60

Query: 61  NHSQKNILIPVNDDFSLTDEVAMDCEMVGVGQGNK--------VNKWGNVIYDEFVRPIE 120
           NHSQKNILIPVNDDFSLTDEVAMDCEMVGVGQGNK        VNKWGNVIYDEFVRPIE
Sbjct: 61  NHSQKNILIPVNDDFSLTDEVAMDCEMVGVGQGNKSALGRVTLVNKWGNVIYDEFVRPIE 120

Query: 121 RVVDFRTQISGIRPCDLKKAKDFPTVQKRVAELIKGKILVGHALRNDLKALLLSHPKKDV 180
           RVVDFRTQISGIRPCDLKKAKDFPTVQKRVAELIKGKILVGHALRNDLKALLLSHPK DV
Sbjct: 121 RVVDFRTQISGIRPCDLKKAKDFPTVQKRVAELIKGKILVGHALRNDLKALLLSHPKNDV 180

Query: 181 RDTCEYQFFQKEGSKRALRHLAAEFLGVEIQNGEHCPVEDARSAMLLYQKKRKEWEKSVK 240
           RDT EYQFFQKEG KRALRHLAAEFLGV+IQNGEHCPVEDARSAMLLYQKKRKEWEKSVK
Sbjct: 181 RDTSEYQFFQKEGCKRALRHLAAEFLGVQIQNGEHCPVEDARSAMLLYQKKRKEWEKSVK 240

Query: 241 AELKLKLKQKKRKPRKKSKDGGGFE 258
           AE KLKLKQKKRKPRKKSKDGGGFE
Sbjct: 241 AEQKLKLKQKKRKPRKKSKDGGGFE 265

[Close]

BLAST of PI0019527 vs. ExPASy TrEMBL
Match: A0A1S3CJW0 (RNA exonuclease 4 OS=Cucumis melo OX=3656 GN=LOC103501792 PE=3 SV=1)

HSP 1 Score: 479.6 bits (1233), Expect = 8.4e-132
Identity = 247/265 (93.21%), Postives = 252/265 (95.09%), Query Frame = 0


Query: 1   MESQLKKNPKPKLLNPNWALLQQKLKPHGSNHSKSSTIPKSEASSKTVLGKRKERSDVES 60
           M SQLKKNPKPKLLNPNWA+LQQKLKPHGSNHSK+ST+PKSEASSKT+LGKRKERSDVES
Sbjct: 1   MTSQLKKNPKPKLLNPNWAILQQKLKPHGSNHSKASTVPKSEASSKTLLGKRKERSDVES 60

Query: 61  NHSQKNILIPVNDDFSLTDEVAMDCEMVGVGQGNK--------VNKWGNVIYDEFVRPIE 120
           NHSQKNILIPVNDDFSLTDEVAMDCEMVGVGQGNK        VNKWGNVIYDEFVRPIE
Sbjct: 61  NHSQKNILIPVNDDFSLTDEVAMDCEMVGVGQGNKSALGRVTLVNKWGNVIYDEFVRPIE 120

Query: 121 RVVDFRTQISGIRPCDLKKAKDFPTVQKRVAELIKGKILVGHALRNDLKALLLSHPKKDV 180
           RVVDFRTQISGIRPCDLKKAKDFPTVQKRVAELIKGKILVGHALRNDLKALLLSHPK DV
Sbjct: 121 RVVDFRTQISGIRPCDLKKAKDFPTVQKRVAELIKGKILVGHALRNDLKALLLSHPKNDV 180

Query: 181 RDTCEYQFFQKEGSKRALRHLAAEFLGVEIQNGEHCPVEDARSAMLLYQKKRKEWEKSVK 240
           RDT EYQFFQKEG KRALRHLAAEFLGV+IQNGEHCPVEDARSAMLLYQKKRKEWEKSVK
Sbjct: 181 RDTSEYQFFQKEGCKRALRHLAAEFLGVQIQNGEHCPVEDARSAMLLYQKKRKEWEKSVK 240

Query: 241 AELKLKLKQKKRKPRKKSKDGGGFE 258
           AE KLKLKQKKRKPRKKSKDGGGFE
Sbjct: 241 AEQKLKLKQKKRKPRKKSKDGGGFE 265

[Close]

BLAST of PI0019527 vs. ExPASy TrEMBL
Match: A0A0A0KZK3 (RNA exonuclease 4 OS=Cucumis sativus OX=3659 GN=Csa_4G628920 PE=3 SV=1)

HSP 1 Score: 465.3 bits (1196), Expect = 1.6e-127
Identity = 243/265 (91.70%), Postives = 248/265 (93.58%), Query Frame = 0


Query: 1   MESQLKKNPKPKLLNPNWALLQQKLKPHGSNHSKSSTIPKSEASSKTVLGKRKERSDVES 60
           M+SQLKKNPKPKLLNPNWALLQQKL PHGSNH  S+T+ KSEASSKT+LGKRKERSDVES
Sbjct: 1   MKSQLKKNPKPKLLNPNWALLQQKLNPHGSNH--SNTVLKSEASSKTLLGKRKERSDVES 60

Query: 61  NHSQKNILIPVNDDFSLTDEVAMDCEMVGVGQGNK--------VNKWGNVIYDEFVRPIE 120
           NHSQKNILIPVNDDFSLTDEVAMDCEMVGVGQGNK        VNKWGNVIYDEFVRPIE
Sbjct: 61  NHSQKNILIPVNDDFSLTDEVAMDCEMVGVGQGNKSALGRVTLVNKWGNVIYDEFVRPIE 120

Query: 121 RVVDFRTQISGIRPCDLKKAKDFPTVQKRVAELIKGKILVGHALRNDLKALLLSHPKKDV 180
           RVVDFRTQISGIRPCDLKKAKDFPTVQKRVAELIKGK+LVGHALRNDLKALLLSHPK DV
Sbjct: 121 RVVDFRTQISGIRPCDLKKAKDFPTVQKRVAELIKGKLLVGHALRNDLKALLLSHPKNDV 180

Query: 181 RDTCEYQFFQKEGSKRALRHLAAEFLGVEIQNGEHCPVEDARSAMLLYQKKRKEWEKSVK 240
           RDT EYQFFQKEG KRALRHLAAEFL VEIQNGEHCPVEDARSAMLLYQKKRKEWEKSVK
Sbjct: 181 RDTSEYQFFQKEGCKRALRHLAAEFLSVEIQNGEHCPVEDARSAMLLYQKKRKEWEKSVK 240

Query: 241 AELKLKLKQKKRKPRKKSKDGGGFE 258
           AE KLKLKQKKRKPRKKSKDGGGFE
Sbjct: 241 AEQKLKLKQKKRKPRKKSKDGGGFE 263

[Close]

BLAST of PI0019527 vs. ExPASy TrEMBL
Match: A0A5A7VEJ2 (RNA exonuclease 4 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold384G001270 PE=3 SV=1)

HSP 1 Score: 437.6 bits (1124), Expect = 3.7e-119
Identity = 226/242 (93.39%), Postives = 230/242 (95.04%), Query Frame = 0


Query: 24  KLKPHGSNHSKSSTIPKSEASSKTVLGKRKERSDVESNHSQKNILIPVNDDFSLTDEVAM 83
           KLKPHGSNHSK+ST+PKSEASSKT+LGKRKERSDVESNHSQKNILIPVNDDFSLTDEVAM
Sbjct: 6   KLKPHGSNHSKASTVPKSEASSKTLLGKRKERSDVESNHSQKNILIPVNDDFSLTDEVAM 65

Query: 84  DCEMVGVGQGNK--------VNKWGNVIYDEFVRPIERVVDFRTQISGIRPCDLKKAKDF 143
           DCEMVGVGQGNK        VNKWGNVIYDEFVRPIERVVDFRTQISGIRPCDLKKAKDF
Sbjct: 66  DCEMVGVGQGNKSALGRVTLVNKWGNVIYDEFVRPIERVVDFRTQISGIRPCDLKKAKDF 125

Query: 144 PTVQKRVAELIKGKILVGHALRNDLKALLLSHPKKDVRDTCEYQFFQKEGSKRALRHLAA 203
           PTVQKRVAELIKGKILVGHALRNDLKALLLSHPK DVRDT EYQFFQKEG KRALRHLAA
Sbjct: 126 PTVQKRVAELIKGKILVGHALRNDLKALLLSHPKNDVRDTSEYQFFQKEGCKRALRHLAA 185

Query: 204 EFLGVEIQNGEHCPVEDARSAMLLYQKKRKEWEKSVKAELKLKLKQKKRKPRKKSKDGGG 258
           EFLGV+IQNGEHCPVEDARSAMLLYQKKRKEWEKSVKAE KLKLKQKKRKPRKKSKDGGG
Sbjct: 186 EFLGVQIQNGEHCPVEDARSAMLLYQKKRKEWEKSVKAEQKLKLKQKKRKPRKKSKDGGG 245

[Close]

BLAST of PI0019527 vs. ExPASy TrEMBL
Match: A0A6J1FBB2 (RNA exonuclease 4 OS=Cucurbita moschata OX=3662 GN=LOC111442550 PE=3 SV=1)

HSP 1 Score: 437.2 bits (1123), Expect = 4.8e-119
Identity = 228/265 (86.04%), Postives = 242/265 (91.32%), Query Frame = 0


Query: 1   MESQLKKNPKPKLLNPNWALLQQKLKPHGSNHSKSSTIPKSEASSKTVLGKRKERSDVES 60
           MESQLKK+ KPKLLNPNWALLQQKL PHGS   +SS++PKSEASSKT+LGKRK+RSD ES
Sbjct: 1   MESQLKKSAKPKLLNPNWALLQQKLNPHGS--KRSSSVPKSEASSKTLLGKRKDRSDEES 60

Query: 61  NHSQKNILIPVNDDFSLTDEVAMDCEMVGVGQGNK--------VNKWGNVIYDEFVRPIE 120
           +HS K +LIPVNDDFSLTD VAMDCEMVGVGQGNK        VNKWGNVIYDEFVRPIE
Sbjct: 61  DHSNKKLLIPVNDDFSLTDVVAMDCEMVGVGQGNKSALGRVTVVNKWGNVIYDEFVRPIE 120

Query: 121 RVVDFRTQISGIRPCDLKKAKDFPTVQKRVAELIKGKILVGHALRNDLKALLLSHPKKDV 180
           RVVDFRT+ISGIRPCDL+KAKDFPTVQKRVAELIKG+ILVGHALRNDLKALLLSHPKKDV
Sbjct: 121 RVVDFRTEISGIRPCDLRKAKDFPTVQKRVAELIKGRILVGHALRNDLKALLLSHPKKDV 180

Query: 181 RDTCEYQFFQKEGSKRALRHLAAEFLGVEIQNGEHCPVEDARSAMLLYQKKRKEWEKSVK 240
           RDT EYQFFQ+ G +RALRHLAAE LGVEIQNGEHCPVEDARSAMLLYQKK KEWEKSVK
Sbjct: 181 RDTSEYQFFQRGGCRRALRHLAAEVLGVEIQNGEHCPVEDARSAMLLYQKKSKEWEKSVK 240

Query: 241 AELKLKLKQKKRKPRKKSKDGGGFE 258
           AE+KLKLKQKKRKPRKKSKDGGG E
Sbjct: 241 AEVKLKLKQKKRKPRKKSKDGGGVE 263

[Close]

BLAST of PI0019527 vs. NCBI nr
Match: XP_008463709.1 (PREDICTED: RNA exonuclease 4 [Cucumis melo] >ADN33800.1 RNA exonuclease [Cucumis melo subsp. melo])

HSP 1 Score: 479.6 bits (1233), Expect = 1.7e-131
Identity = 247/265 (93.21%), Postives = 252/265 (95.09%), Query Frame = 0


Query: 1   MESQLKKNPKPKLLNPNWALLQQKLKPHGSNHSKSSTIPKSEASSKTVLGKRKERSDVES 60
           M SQLKKNPKPKLLNPNWA+LQQKLKPHGSNHSK+ST+PKSEASSKT+LGKRKERSDVES
Sbjct: 1   MTSQLKKNPKPKLLNPNWAILQQKLKPHGSNHSKASTVPKSEASSKTLLGKRKERSDVES 60

Query: 61  NHSQKNILIPVNDDFSLTDEVAMDCEMVGVGQGNK--------VNKWGNVIYDEFVRPIE 120
           NHSQKNILIPVNDDFSLTDEVAMDCEMVGVGQGNK        VNKWGNVIYDEFVRPIE
Sbjct: 61  NHSQKNILIPVNDDFSLTDEVAMDCEMVGVGQGNKSALGRVTLVNKWGNVIYDEFVRPIE 120

Query: 121 RVVDFRTQISGIRPCDLKKAKDFPTVQKRVAELIKGKILVGHALRNDLKALLLSHPKKDV 180
           RVVDFRTQISGIRPCDLKKAKDFPTVQKRVAELIKGKILVGHALRNDLKALLLSHPK DV
Sbjct: 121 RVVDFRTQISGIRPCDLKKAKDFPTVQKRVAELIKGKILVGHALRNDLKALLLSHPKNDV 180

Query: 181 RDTCEYQFFQKEGSKRALRHLAAEFLGVEIQNGEHCPVEDARSAMLLYQKKRKEWEKSVK 240
           RDT EYQFFQKEG KRALRHLAAEFLGV+IQNGEHCPVEDARSAMLLYQKKRKEWEKSVK
Sbjct: 181 RDTSEYQFFQKEGCKRALRHLAAEFLGVQIQNGEHCPVEDARSAMLLYQKKRKEWEKSVK 240

Query: 241 AELKLKLKQKKRKPRKKSKDGGGFE 258
           AE KLKLKQKKRKPRKKSKDGGGFE
Sbjct: 241 AEQKLKLKQKKRKPRKKSKDGGGFE 265

[Close]

BLAST of PI0019527 vs. NCBI nr
Match: XP_004146040.1 (RNA exonuclease 4 [Cucumis sativus])

HSP 1 Score: 465.3 bits (1196), Expect = 3.4e-127
Identity = 243/265 (91.70%), Postives = 248/265 (93.58%), Query Frame = 0


Query: 1   MESQLKKNPKPKLLNPNWALLQQKLKPHGSNHSKSSTIPKSEASSKTVLGKRKERSDVES 60
           M+SQLKKNPKPKLLNPNWALLQQKL PHGSNH  S+T+ KSEASSKT+LGKRKERSDVES
Sbjct: 1   MKSQLKKNPKPKLLNPNWALLQQKLNPHGSNH--SNTVLKSEASSKTLLGKRKERSDVES 60

Query: 61  NHSQKNILIPVNDDFSLTDEVAMDCEMVGVGQGNK--------VNKWGNVIYDEFVRPIE 120
           NHSQKNILIPVNDDFSLTDEVAMDCEMVGVGQGNK        VNKWGNVIYDEFVRPIE
Sbjct: 61  NHSQKNILIPVNDDFSLTDEVAMDCEMVGVGQGNKSALGRVTLVNKWGNVIYDEFVRPIE 120

Query: 121 RVVDFRTQISGIRPCDLKKAKDFPTVQKRVAELIKGKILVGHALRNDLKALLLSHPKKDV 180
           RVVDFRTQISGIRPCDLKKAKDFPTVQKRVAELIKGK+LVGHALRNDLKALLLSHPK DV
Sbjct: 121 RVVDFRTQISGIRPCDLKKAKDFPTVQKRVAELIKGKLLVGHALRNDLKALLLSHPKNDV 180

Query: 181 RDTCEYQFFQKEGSKRALRHLAAEFLGVEIQNGEHCPVEDARSAMLLYQKKRKEWEKSVK 240
           RDT EYQFFQKEG KRALRHLAAEFL VEIQNGEHCPVEDARSAMLLYQKKRKEWEKSVK
Sbjct: 181 RDTSEYQFFQKEGCKRALRHLAAEFLSVEIQNGEHCPVEDARSAMLLYQKKRKEWEKSVK 240

Query: 241 AELKLKLKQKKRKPRKKSKDGGGFE 258
           AE KLKLKQKKRKPRKKSKDGGGFE
Sbjct: 241 AEQKLKLKQKKRKPRKKSKDGGGFE 263

[Close]

BLAST of PI0019527 vs. NCBI nr
Match: XP_038897122.1 (RNA exonuclease 4 isoform X3 [Benincasa hispida])

HSP 1 Score: 460.3 bits (1183), Expect = 1.1e-125
Identity = 241/265 (90.94%), Postives = 247/265 (93.21%), Query Frame = 0


Query: 1   MESQLKKNPKPKLLNPNWALLQQKLKPHGSNHSKSSTIPKSEASSKTVLGKRKERSDVES 60
           MESQLKK  KPKLLNPNWALLQQKLKP GSNHS+SST+PKSEASSKT+LGKRKERSDVES
Sbjct: 1   MESQLKKTSKPKLLNPNWALLQQKLKPLGSNHSRSSTVPKSEASSKTLLGKRKERSDVES 60

Query: 61  NHSQKNILIPVNDDFSLTDEVAMDCEMVGVGQGNK--------VNKWGNVIYDEFVRPIE 120
           NHSQKNILIPVNDDFSLTD VAMDCEMVGVGQGNK        VNKWGNVIYDEFVRPIE
Sbjct: 61  NHSQKNILIPVNDDFSLTDVVAMDCEMVGVGQGNKSALGRVTLVNKWGNVIYDEFVRPIE 120

Query: 121 RVVDFRTQISGIRPCDLKKAKDFPTVQKRVAELIKGKILVGHALRNDLKALLLSHPKKDV 180
           RVVDFRTQISGIRP DLKKAKDF TVQKRVAELIKGKILVGHALRNDLKALLLSHPK+DV
Sbjct: 121 RVVDFRTQISGIRPSDLKKAKDFSTVQKRVAELIKGKILVGHALRNDLKALLLSHPKQDV 180

Query: 181 RDTCEYQFFQKEGSKRALRHLAAEFLGVEIQNGEHCPVEDARSAMLLYQKKRKEWEKSVK 240
           RDT EYQFFQKEG +RALRHLAAEFLGVEIQNGEHCPVEDARSAMLLYQKKRKEWEKSVK
Sbjct: 181 RDTSEYQFFQKEGCRRALRHLAAEFLGVEIQNGEHCPVEDARSAMLLYQKKRKEWEKSVK 240

Query: 241 AELKLKLKQKKRKPRKKSKDGGGFE 258
            E+KLKLKQKKRK RKKSKDGGGFE
Sbjct: 241 GEIKLKLKQKKRKRRKKSKDGGGFE 265

[Close]

BLAST of PI0019527 vs. NCBI nr
Match: KAE8649831.1 (hypothetical protein Csa_012901 [Cucumis sativus])

HSP 1 Score: 458.8 bits (1179), Expect = 3.2e-125
Identity = 240/262 (91.60%), Postives = 245/262 (93.51%), Query Frame = 0


Query: 1   MESQLKKNPKPKLLNPNWALLQQKLKPHGSNHSKSSTIPKSEASSKTVLGKRKERSDVES 60
           M+SQLKKNPKPKLLNPNWALLQQKL PHGSNH  S+T+ KSEASSKT+LGKRKERSDVES
Sbjct: 1   MKSQLKKNPKPKLLNPNWALLQQKLNPHGSNH--SNTVLKSEASSKTLLGKRKERSDVES 60

Query: 61  NHSQKNILIPVNDDFSLTDEVAMDCEMVGVGQGNK--------VNKWGNVIYDEFVRPIE 120
           NHSQKNILIPVNDDFSLTDEVAMDCEMVGVGQGNK        VNKWGNVIYDEFVRPIE
Sbjct: 61  NHSQKNILIPVNDDFSLTDEVAMDCEMVGVGQGNKSALGRVTLVNKWGNVIYDEFVRPIE 120

Query: 121 RVVDFRTQISGIRPCDLKKAKDFPTVQKRVAELIKGKILVGHALRNDLKALLLSHPKKDV 180
           RVVDFRTQISGIRPCDLKKAKDFPTVQKRVAELIKGK+LVGHALRNDLKALLLSHPK DV
Sbjct: 121 RVVDFRTQISGIRPCDLKKAKDFPTVQKRVAELIKGKLLVGHALRNDLKALLLSHPKNDV 180

Query: 181 RDTCEYQFFQKEGSKRALRHLAAEFLGVEIQNGEHCPVEDARSAMLLYQKKRKEWEKSVK 240
           RDT EYQFFQKEG KRALRHLAAEFL VEIQNGEHCPVEDARSAMLLYQKKRKEWEKSVK
Sbjct: 181 RDTSEYQFFQKEGCKRALRHLAAEFLSVEIQNGEHCPVEDARSAMLLYQKKRKEWEKSVK 240

Query: 241 AELKLKLKQKKRKPRKKSKDGG 255
           AE KLKLKQKKRKPRKKSKDGG
Sbjct: 241 AEQKLKLKQKKRKPRKKSKDGG 260

[Close]

BLAST of PI0019527 vs. NCBI nr
Match: XP_038897121.1 (RNA exonuclease 4 isoform X2 [Benincasa hispida])

HSP 1 Score: 453.4 bits (1165), Expect = 1.3e-123
Identity = 241/272 (88.60%), Postives = 247/272 (90.81%), Query Frame = 0


Query: 1   MESQLKKNPKPKLLNPNWALLQQ-------KLKPHGSNHSKSSTIPKSEASSKTVLGKRK 60
           MESQLKK  KPKLLNPNWALLQQ       KLKP GSNHS+SST+PKSEASSKT+LGKRK
Sbjct: 1   MESQLKKTSKPKLLNPNWALLQQVLLVVVVKLKPLGSNHSRSSTVPKSEASSKTLLGKRK 60

Query: 61  ERSDVESNHSQKNILIPVNDDFSLTDEVAMDCEMVGVGQGNK--------VNKWGNVIYD 120
           ERSDVESNHSQKNILIPVNDDFSLTD VAMDCEMVGVGQGNK        VNKWGNVIYD
Sbjct: 61  ERSDVESNHSQKNILIPVNDDFSLTDVVAMDCEMVGVGQGNKSALGRVTLVNKWGNVIYD 120

Query: 121 EFVRPIERVVDFRTQISGIRPCDLKKAKDFPTVQKRVAELIKGKILVGHALRNDLKALLL 180
           EFVRPIERVVDFRTQISGIRP DLKKAKDF TVQKRVAELIKGKILVGHALRNDLKALLL
Sbjct: 121 EFVRPIERVVDFRTQISGIRPSDLKKAKDFSTVQKRVAELIKGKILVGHALRNDLKALLL 180

Query: 181 SHPKKDVRDTCEYQFFQKEGSKRALRHLAAEFLGVEIQNGEHCPVEDARSAMLLYQKKRK 240
           SHPK+DVRDT EYQFFQKEG +RALRHLAAEFLGVEIQNGEHCPVEDARSAMLLYQKKRK
Sbjct: 181 SHPKQDVRDTSEYQFFQKEGCRRALRHLAAEFLGVEIQNGEHCPVEDARSAMLLYQKKRK 240

Query: 241 EWEKSVKAELKLKLKQKKRKPRKKSKDGGGFE 258
           EWEKSVK E+KLKLKQKKRK RKKSKDGGGFE
Sbjct: 241 EWEKSVKGEIKLKLKQKKRKRRKKSKDGGGFE 272

[Close]

BLAST of PI0019527 vs. TAIR 10
Match: AT3G15080.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )

HSP 1 Score: 320.1 bits (819), Expect = 1.6e-87
Identity = 171/267 (64.04%), Postives = 207/267 (77.53%), Query Frame = 0


Query: 1   MESQLKKNPKPKL------LNPNWALLQQKLKPHGSNHSKSSTIPKSEASSKTVLGKRKE 60
           M S LK+ PK K+      LNPNW+LLQQKLK     +++ S+ P++ +S   +LGKRKE
Sbjct: 1   MSSDLKRKPKKKITPKPVQLNPNWSLLQQKLKSDSHGNTRKSSNPENPSS---ILGKRKE 60

Query: 61  RSDVESNHSQKNILIPVNDDFSLTDEVAMDCEMVGVGQGNK--------VNKWGNVIYDE 120
           R D E +  + N L PVNDD SLTDEVAMDCEMVGV QG K        VNKWGNV+YDE
Sbjct: 61  RPDSEVDVPKINPLAPVNDDSSLTDEVAMDCEMVGVSQGTKSALGRVTLVNKWGNVLYDE 120

Query: 121 FVRPIERVVDFRTQISGIRPCDLKKAKDFPTVQKRVAELIKGKILVGHALRNDLKALLLS 180
           FVRP+E VVDFRT ISGIRP DL+KAKDF   Q +VAELIKGKILVGHAL NDLKALLL+
Sbjct: 121 FVRPVEHVVDFRTSISGIRPRDLRKAKDFRVAQTKVAELIKGKILVGHALHNDLKALLLT 180

Query: 181 HPKKDVRDTCEYQFFQKEGSKRALRHLAAEFLGVEIQNGEHCPVEDARSAMLLYQKKRKE 240
           HPKKD+RDT EYQ F K  ++++L+HLA+E LG +IQNGEHCP++DAR+AM+LYQK RKE
Sbjct: 181 HPKKDIRDTGEYQPFLKGKTRKSLKHLASEILGADIQNGEHCPIDDARAAMMLYQKNRKE 240

Query: 241 WEKSVKAELKLKLKQKKRKPRKKSKDG 254
           WEK+VK + ++ LKQKKRKP+KK+K G
Sbjct: 241 WEKTVKDQTRMWLKQKKRKPKKKAKYG 264

[Close]

BLAST of PI0019527 vs. TAIR 10
Match: AT3G27970.1 (Exonuclease family protein )

HSP 1 Score: 84.3 bits (207), Expect = 1.5e-16
Identity = 53/173 (30.64%), Postives = 84/173 (48.55%), Query Frame = 0


Query: 81  VAMDCEMVGVGQGNKV---------NKWGNVIYDEFVRPIERVVDFRTQISGIRPCDLKK 140
           VA+ C+MVG G    +         ++  NVI+  +V+P   V  +R + +GIRP +L+ 
Sbjct: 136 VALSCKMVGGGSDGSLDLCARVCITDESDNVIFHTYVKPSMAVTSYRYETTGIRPENLRD 195

Query: 141 AKDFPTVQKRVAELI--------------KGKILVGHALRNDLKALLLSHPKKDVRDTCE 200
           A     VQ+++ E +              K +ILVGH L +DL  L L +P   +RDT +
Sbjct: 196 AMPLKQVQRKIQEFLCNGEPMWKIRPRGGKARILVGHGLDHDLDRLQLEYPSSMIRDTAK 255

Query: 201 YQFFQKEGS-KRALRHLAAEFLGVEIQNGEHCPVEDARSAMLLYQKKRKEWEK 230
           Y    K      +L++L   +LG ++  G   P ED  + M LY + R +  K
Sbjct: 256 YPPLMKTSKLSNSLKYLTQAYLGYDVHFGIQDPYEDCVATMRLYTRMRYQKHK 308

[Close]

BLAST of PI0019527 vs. TAIR 10
Match: AT5G40310.1 (Exonuclease family protein )

HSP 1 Score: 82.8 bits (203), Expect = 4.4e-16
Identity = 52/168 (30.95%), Postives = 82/168 (48.81%), Query Frame = 0


Query: 81  VAMDCEMVGVGQGNKV---------NKWGNVIYDEFVRPIERVVDFRTQISGIRPCDLKK 140
           VA+ C+MVG G    +         ++  NV++  +V+P   V ++R +++GIRP +L+ 
Sbjct: 127 VALSCKMVGGGSDGSLDLCARVCITDESENVVFHTYVKPTIPVTNYRYEMTGIRPENLRD 186

Query: 141 AKDFPTVQKRVAELI--------------KGKILVGHALRNDLKALLLSHPKKDVRDTCE 200
           A      Q++V E +              K +ILVGH L N L +L L +    +RDT E
Sbjct: 187 AMRLKHAQRKVQEFLCNGEPMWKIRPRNGKARILVGHGLDNHLDSLQLEYSSSMIRDTAE 246

Query: 201 YQFFQKEGS-KRALRHLAAEFLGVEIQNGEHCPVEDARSAMLLYQKKR 225
           Y    K      +L++L   +LG +I  G   P ED  + M LY + R
Sbjct: 247 YPPLMKSSKLSNSLKYLTQAYLGYDIHVGIQDPYEDCVATMRLYTRMR 294

[Close]

BLAST of PI0019527 vs. TAIR 10
Match: AT3G50100.1 (small RNA degrading nuclease 1 )

HSP 1 Score: 74.7 bits (182), Expect = 1.2e-13
Identity = 57/155 (36.77%), Postives = 85/155 (54.84%), Query Frame = 0


Query: 78  TDEVAMDCEMV-------GVGQGNKVNKWGNVIYDEFVRPIERVVDFRTQISGIRPCDLK 137
           T+ VA+DCEMV       G+ +   V++   VI DEFV+P + VVD+RT I+GI   D++
Sbjct: 138 TNMVAVDCEMVLCEDGTEGLVRVGVVDRDLKVILDEFVKPNKPVVDYRTDITGITAEDIE 197

Query: 138 KAK-DFPTVQKRVAELIK-GKILVGHALRNDLKALLLSHPKKDVRDTC-EYQFFQKEGSK 197
            A      +Q+ +   +  G ILVGH+L  DL+ L + HPK  V DT   +++      +
Sbjct: 198 NASLSVVDIQETLQPFLSTGTILVGHSLNRDLEVLKIDHPK--VIDTALVFKYPNTRKLR 257

Query: 198 R-ALRHLAAEFLGVEIQNG--EHCPVEDARSAMLL 220
           R +L +L    LG E++     H  V DA +AM L
Sbjct: 258 RPSLNNLCKSILGYEVRKTGVPHDCVHDASAAMKL 290

[Close]

BLAST of PI0019527 vs. TAIR 10
Match: AT5G05540.1 (small RNA degrading nuclease 2 )

HSP 1 Score: 73.6 bits (179), Expect = 2.7e-13
Identity = 57/157 (36.31%), Postives = 85/157 (54.14%), Query Frame = 0


Query: 81  VAMDCEMVGVGQGNK-------VNKWGNVIYDEFVRPIERVVDFRTQISGIRPCDLKKAK 140
           +A+DCEMV    G++       V++   VI DEFV+P + VVD+RT I+G+   DL+KA 
Sbjct: 143 IAIDCEMVLCEDGSEAVVRVAAVDRDLKVILDEFVKPNQPVVDYRTFITGLTAQDLEKAT 202

Query: 141 -DFPTVQKRVAELI-KGKILVGHALRNDLKALLLSHPKKDVRDTCEYQFFQKEGSKRALR 200
                +Q+++   I +  ILVG +L +DLK L + H +  V DT     +  +G++R LR
Sbjct: 203 ISVVDIQEKLLMFISEDTILVGQSLNHDLKVLKVDHAR--VIDTSLVFKYNYDGTRRPLR 262

Query: 201 -------HLAAEFLGVEIQNG--EHCPVEDARSAMLL 220
                  +L    LG E+Q     H  V DA +AM L
Sbjct: 263 LKRPSLNYLCKCILGYEVQKEGVPHNCVHDAEAAMKL 297

The following BLAST results are available for this feature:

BLAST of PI0019527 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q91560	2.8e-39	45.95	RNA exonuclease 4 OS=Xenopus laevis OX=8355 GN=rexo4 PE=2 SV=2	[more]
Q9GZR2	4.7e-39	47.90	RNA exonuclease 4 OS=Homo sapiens OX=9606 GN=REXO4 PE=1 SV=2	[more]
Q6PAQ4	6.2e-39	46.67	RNA exonuclease 4 OS=Mus musculus OX=10090 GN=Rexo4 PE=2 SV=2	[more]
Q6DEW6	3.1e-38	46.45	RNA exonuclease 4 OS=Xenopus tropicalis OX=8364 GN=rexo4 PE=2 SV=1	[more]
Q4WHF8	1.6e-34	41.04	RNA exonuclease 4 OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 10...	[more]

BLAST of PI0019527 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
E5GBF8	8.4e-132	93.21	RNA exonuclease 4 OS=Cucumis melo subsp. melo OX=412675 PE=3 SV=1	[more]
A0A1S3CJW0	8.4e-132	93.21	RNA exonuclease 4 OS=Cucumis melo OX=3656 GN=LOC103501792 PE=3 SV=1	[more]
A0A0A0KZK3	1.6e-127	91.70	RNA exonuclease 4 OS=Cucumis sativus OX=3659 GN=Csa_4G628920 PE=3 SV=1	[more]
A0A5A7VEJ2	3.7e-119	93.39	RNA exonuclease 4 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold384G00...	[more]
A0A6J1FBB2	4.8e-119	86.04	RNA exonuclease 4 OS=Cucurbita moschata OX=3662 GN=LOC111442550 PE=3 SV=1	[more]

BLAST of PI0019527 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008463709.1	1.7e-131	93.21	PREDICTED: RNA exonuclease 4 [Cucumis melo] >ADN33800.1 RNA exonuclease [Cucumis...	[more]
XP_004146040.1	3.4e-127	91.70	RNA exonuclease 4 [Cucumis sativus]	[more]
XP_038897122.1	1.1e-125	90.94	RNA exonuclease 4 isoform X3 [Benincasa hispida]	[more]
KAE8649831.1	3.2e-125	91.60	hypothetical protein Csa_012901 [Cucumis sativus]	[more]
XP_038897121.1	1.3e-123	88.60	RNA exonuclease 4 isoform X2 [Benincasa hispida]	[more]

BLAST of PI0019527 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G15080.1	1.6e-87	64.04	Polynucleotidyl transferase, ribonuclease H-like superfamily protein	[more]
AT3G27970.1	1.5e-16	30.64	Exonuclease family protein	[more]
AT5G40310.1	4.4e-16	30.95	Exonuclease family protein	[more]
AT3G50100.1	1.2e-13	36.77	small RNA degrading nuclease 1	[more]
AT5G05540.1	2.7e-13	36.31	small RNA degrading nuclease 2	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013520	Exonuclease, RNase T/DNA polymerase III	SMART	SM00479	exoiiiendus	coord: 79..229 e-value: 1.2E-34 score: 131.1
IPR013520	Exonuclease, RNase T/DNA polymerase III	PFAM	PF00929	RNase_T	coord: 104..220 e-value: 3.0E-10 score: 40.9
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 78..247 e-value: 2.8E-50 score: 172.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 238..257
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..63
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 46..61
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 24..44
None	No IPR available	PANTHER	PTHR12801:SF135	RNA EXONUCLEASE 4	coord: 36..248
None	No IPR available	PANTHER	PTHR12801	RNA EXONUCLEASE REXO1 / RECO3 FAMILY MEMBER-RELATED	coord: 36..248
IPR037431	RNA exonuclease 4, DEDDh 3'-5' exonuclease domain	CDD	cd06144	REX4_like	coord: 81..221 e-value: 5.00228E-85 score: 248.585
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 80..229

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0019527.1	PI0019527.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0090305	nucleic acid phosphodiester bond hydrolysis
biological_process	GO:0006364	rRNA processing
cellular_component	GO:0005634	nucleus
molecular_function	GO:0008408	3'-5' exonuclease activity
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0016740	transferase activity