PI0019496 (gene) Melon (PI 482460) v1

Overview


Name	PI0019496
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	serine/threonine-protein phosphatase 7 long form homolog isoform X1
Location	chr10: 4055846 .. 4056803 (+)
RNA-Seq Expression	PI0019496
Synteny	PI0019496

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACAGGTTCCCTATTTGGTCGACCTTTGAGTTTCAGGTATAATTTTATTTATATATTGTTTTTTTATTACAATTTGTCCTATCTATAACTTATTGTTCATTTTTTTCACACATTAGATGGAATGGTGTTCTAGCTGCATCAGAACAGTCAGCGAATATGTTGTTGACGTATCGACAAATATTTGACCAACTCATACACTCGCAGGTAGTAAAGTATTATACGAATGTTGTCTACTTATTTTTTGTTGTCTACTTACGTTCTTTTTTCAACAGATTATTTGGACACCATACATGTCCGACATTGTGACATTGCTTCATGATCGATGTCATAATGGTCAAGATGTGGACGTACATGGATCCCATGATTTGCTTTCATATCGTTGAGATGCATCAACCAAATCGTGTGTTGCGACAATTCGATATGCTGCAAATGCGACTAATAATTAGCTTTACAGATCCGACATTACACCAAATTGATTTATGAGGTAAACACGATCAAGATTGTCGTCGGATCCATGCAGAGCATATCACATTGTGGCATTTGTGAAATGATTTTCGTGCACAAGAAGTAGCAACACACGAGCCAACAGTATCAGATGACTATTTCCCCTGGTACTCGTCAATTACAAGACGCTTCGTCACACCTGATGGAGCTTACTATTATTGCATGGTAAGAATTTTAATATGATTTATTTTATAATTTTATAACATGCACATTGTTTAATTATATTATTTGGAATCTTTCAGAATAATTTTATTCAAGACGTACATGCTTACTCAATGGAACACAACTCACAAGATTTGAACTCAATGTGTGATCAAACGTTGGAAAATATAGAACAAATTATTCAGCAGACCAGACGACTCAATGTTGCCGACACAGATCAAAGACGCATTCGACGTAGACGACAACGACAAGGCGATGGTGTCGTAGAGGGAGATCAAGATAATGCTTAG

mRNA sequence

ATGACAGGTTCCCTATTTGGTCGACCTTTGAGTTTCAGATGGAATGGTGTTCTAGCTGCATCAGAACAGTCAGCGAATATGTTGTTGACGTATCGACAAATATTTGACCAACTCATACACTCGCAGATTATTTGGACACCATACATGTCCGACATTGTGACATTGCTTCATGATCGATGTCATAATGGTCAAGATGTGGACAATAATTTTATTCAAGACGTACATGCTTACTCAATGGAACACAACTCACAAGATTTGAACTCAATGTGTGATCAAACGTTGGAAAATATAGAACAAATTATTCAGCAGACCAGACGACTCAATGTTGCCGACACAGATCAAAGACGCATTCGACGTAGACGACAACGACAAGGCGATGGTGTCGTAGAGGGAGATCAAGATAATGCTTAG

Coding sequence (CDS)

ATGACAGGTTCCCTATTTGGTCGACCTTTGAGTTTCAGATGGAATGGTGTTCTAGCTGCATCAGAACAGTCAGCGAATATGTTGTTGACGTATCGACAAATATTTGACCAACTCATACACTCGCAGATTATTTGGACACCATACATGTCCGACATTGTGACATTGCTTCATGATCGATGTCATAATGGTCAAGATGTGGACAATAATTTTATTCAAGACGTACATGCTTACTCAATGGAACACAACTCACAAGATTTGAACTCAATGTGTGATCAAACGTTGGAAAATATAGAACAAATTATTCAGCAGACCAGACGACTCAATGTTGCCGACACAGATCAAAGACGCATTCGACGTAGACGACAACGACAAGGCGATGGTGTCGTAGAGGGAGATCAAGATAATGCTTAG

Protein sequence

MTGSLFGRPLSFRWNGVLAASEQSANMLLTYRQIFDQLIHSQIIWTPYMSDIVTLLHDRCHNGQDVDNNFIQDVHAYSMEHNSQDLNSMCDQTLENIEQIIQQTRRLNVADTDQRRIRRRRQRQGDGVVEGDQDNA

Homology

[Close]

BLAST of PI0019496 vs. ExPASy TrEMBL
Match: A0A1S4E383 (serine/threonine-protein phosphatase 7 long form homolog isoform X1 OS=Cucumis melo OX=3656 GN=LOC103498663 PE=4 SV=1)

HSP 1 Score: 148.7 bits (374), Expect = 1.8e-32
Identity = 102/245 (41.63%), Postives = 114/245 (46.53%), Query Frame = 0


Query: 4   SLFGRPLSFRWNGVLAASEQSANMLLTYRQIFDQLIHSQIIWTPYMSDIVTLLHDRCHNG 63
           +L  RPL FRW+GV   SEQSANMLLTYRQIFD+L H+QI WTPY SD++TLL DRCHNG
Sbjct: 276 ALVDRPLGFRWSGVQPKSEQSANMLLTYRQIFDRLTHTQINWTPYTSDVMTLLPDRCHNG 335

Query: 64  Q----------------------------------------------------DVD---- 123
           Q                                                    D D    
Sbjct: 336 QLIWTYVGPLICFHIVELHAPDRVLRQFGMHQPLPSFCNTNPALHRIDLRGKHDQDWCKI 395

Query: 124 ----------------------------------------------------NNFIQDVH 137
                                                               NNF+QDV 
Sbjct: 396 HVEYITKWHSRNEFCVKGVATNEPTVSDDYFSWYSSITRRFITTDGAYYYRVNNFVQDVR 455

[Close]

BLAST of PI0019496 vs. ExPASy TrEMBL
Match: A0A1S3CBQ7 (serine/threonine-protein phosphatase 7 long form homolog isoform X2 OS=Cucumis melo OX=3656 GN=LOC103498663 PE=4 SV=1)

HSP 1 Score: 148.7 bits (374), Expect = 1.8e-32
Identity = 102/245 (41.63%), Postives = 114/245 (46.53%), Query Frame = 0


Query: 4   SLFGRPLSFRWNGVLAASEQSANMLLTYRQIFDQLIHSQIIWTPYMSDIVTLLHDRCHNG 63
           +L  RPL FRW+GV   SEQSANMLLTYRQIFD+L H+QI WTPY SD++TLL DRCHNG
Sbjct: 258 ALVDRPLGFRWSGVQPKSEQSANMLLTYRQIFDRLTHTQINWTPYTSDVMTLLPDRCHNG 317

Query: 64  Q----------------------------------------------------DVD---- 123
           Q                                                    D D    
Sbjct: 318 QLIWTYVGPLICFHIVELHAPDRVLRQFGMHQPLPSFCNTNPALHRIDLRGKHDQDWCKI 377

Query: 124 ----------------------------------------------------NNFIQDVH 137
                                                               NNF+QDV 
Sbjct: 378 HVEYITKWHSRNEFCVKGVATNEPTVSDDYFSWYSSITRRFITTDGAYYYRVNNFVQDVR 437

[Close]

BLAST of PI0019496 vs. ExPASy TrEMBL
Match: A0A5A7TSW1 (Serine/threonine-protein phosphatase 7 long form-like protein isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold201G00240 PE=4 SV=1)

HSP 1 Score: 111.7 bits (278), Expect = 2.4e-21
Identity = 81/237 (34.18%), Postives = 101/237 (42.62%), Query Frame = 0


Query: 7   GRPLSFRWNGVLAASEQSANMLLTYRQIFDQLIHSQIIWTPYMSDIVTLLHDRCHNGQDV 66
           GRPLSFRW+GV AASEQS NMLL YR  FD+L  SQI WTPY  DI+  L  RC +GQ V
Sbjct: 261 GRPLSFRWSGVQAASEQSGNMLLIYRWTFDRLSRSQINWTPYTPDIMASLPVRCQSGQAV 320

Query: 67  ------------------------------------------------------------ 126
                                                                       
Sbjct: 321 WTYVGPLICFHLVEKHQPDRVLRQFNMLQTPPAISYTDQRLHQIDLRGKHDQDWRRIHAE 380

Query: 127 ------------------------DN------------------------NFIQDVHAYS 136
                                   +N                        +F+ +V  +S
Sbjct: 381 HIGVWNSRYDFRVEAPTTSEPTVSENYFVWYRSITRRFITQEGAFYHCMYDFVDEVQTFS 440

[Close]

BLAST of PI0019496 vs. ExPASy TrEMBL
Match: A0A5D3BUF5 (Serine/threonine-protein phosphatase 7 long form-like protein isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold298G001440 PE=4 SV=1)

HSP 1 Score: 111.7 bits (278), Expect = 2.4e-21
Identity = 81/237 (34.18%), Postives = 101/237 (42.62%), Query Frame = 0


Query: 7   GRPLSFRWNGVLAASEQSANMLLTYRQIFDQLIHSQIIWTPYMSDIVTLLHDRCHNGQDV 66
           GRPLSFRW+GV AASEQS NMLL YR  FD+L  SQI WTPY  DI+  L  RC +GQ V
Sbjct: 343 GRPLSFRWSGVQAASEQSGNMLLIYRWTFDRLSRSQINWTPYTPDIMASLPVRCQSGQAV 402

Query: 67  ------------------------------------------------------------ 126
                                                                       
Sbjct: 403 WTYVGPLICFHLVEKHQPDRVLRQFNMLQTPPAISYTDQRLHQIDLRGKHDQDWRRIHAE 462

Query: 127 ------------------------DN------------------------NFIQDVHAYS 136
                                   +N                        +F+ +V  +S
Sbjct: 463 HIGVWNSRYDFRVEAPTTSEPTVSENYFVWYRSITRRFITQEGAFYHCMYDFVDEVQTFS 522

[Close]

BLAST of PI0019496 vs. ExPASy TrEMBL
Match: A0A5A7TI34 (Serine/threonine-protein phosphatase 7 long form-like protein isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold75G00540 PE=4 SV=1)

HSP 1 Score: 111.7 bits (278), Expect = 2.4e-21
Identity = 81/237 (34.18%), Postives = 101/237 (42.62%), Query Frame = 0


Query: 7   GRPLSFRWNGVLAASEQSANMLLTYRQIFDQLIHSQIIWTPYMSDIVTLLHDRCHNGQDV 66
           GRPLSFRW+GV AASEQS NMLL YR  FD+L  SQI WTPY  DI+  L  RC +GQ V
Sbjct: 696 GRPLSFRWSGVQAASEQSGNMLLIYRWTFDRLSRSQINWTPYTPDIMASLPVRCQSGQAV 755

Query: 67  ------------------------------------------------------------ 126
                                                                       
Sbjct: 756 WTYVGPLICFHLVEKHQPDRVLRQFNMLQTPPAISYTDQRLHQIDLRGKHDQDWRRIHAE 815

Query: 127 ------------------------DN------------------------NFIQDVHAYS 136
                                   +N                        +F+ +V  +S
Sbjct: 816 HIGVWNSRYDFRVEAPTTSEPTISENYFVWYRSITRRFITQEGAFYHCMYDFVDEVQTFS 875

[Close]

BLAST of PI0019496 vs. NCBI nr
Match: XP_016902435.1 (PREDICTED: serine/threonine-protein phosphatase 7 long form homolog isoform X1 [Cucumis melo])

HSP 1 Score: 148.7 bits (374), Expect = 3.7e-32
Identity = 102/245 (41.63%), Postives = 114/245 (46.53%), Query Frame = 0


Query: 4   SLFGRPLSFRWNGVLAASEQSANMLLTYRQIFDQLIHSQIIWTPYMSDIVTLLHDRCHNG 63
           +L  RPL FRW+GV   SEQSANMLLTYRQIFD+L H+QI WTPY SD++TLL DRCHNG
Sbjct: 276 ALVDRPLGFRWSGVQPKSEQSANMLLTYRQIFDRLTHTQINWTPYTSDVMTLLPDRCHNG 335

Query: 64  Q----------------------------------------------------DVD---- 123
           Q                                                    D D    
Sbjct: 336 QLIWTYVGPLICFHIVELHAPDRVLRQFGMHQPLPSFCNTNPALHRIDLRGKHDQDWCKI 395

Query: 124 ----------------------------------------------------NNFIQDVH 137
                                                               NNF+QDV 
Sbjct: 396 HVEYITKWHSRNEFCVKGVATNEPTVSDDYFSWYSSITRRFITTDGAYYYRVNNFVQDVR 455

[Close]

BLAST of PI0019496 vs. NCBI nr
Match: XP_008459571.1 (PREDICTED: serine/threonine-protein phosphatase 7 long form homolog isoform X2 [Cucumis melo])

HSP 1 Score: 148.7 bits (374), Expect = 3.7e-32
Identity = 102/245 (41.63%), Postives = 114/245 (46.53%), Query Frame = 0


Query: 4   SLFGRPLSFRWNGVLAASEQSANMLLTYRQIFDQLIHSQIIWTPYMSDIVTLLHDRCHNG 63
           +L  RPL FRW+GV   SEQSANMLLTYRQIFD+L H+QI WTPY SD++TLL DRCHNG
Sbjct: 258 ALVDRPLGFRWSGVQPKSEQSANMLLTYRQIFDRLTHTQINWTPYTSDVMTLLPDRCHNG 317

Query: 64  Q----------------------------------------------------DVD---- 123
           Q                                                    D D    
Sbjct: 318 QLIWTYVGPLICFHIVELHAPDRVLRQFGMHQPLPSFCNTNPALHRIDLRGKHDQDWCKI 377

Query: 124 ----------------------------------------------------NNFIQDVH 137
                                                               NNF+QDV 
Sbjct: 378 HVEYITKWHSRNEFCVKGVATNEPTVSDDYFSWYSSITRRFITTDGAYYYRVNNFVQDVR 437

[Close]

BLAST of PI0019496 vs. NCBI nr
Match: TYK03303.1 (serine/threonine-protein phosphatase 7 long form-like protein isoform X1 [Cucumis melo var. makuwa] >TYK12342.1 serine/threonine-protein phosphatase 7 long form-like protein isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 111.7 bits (278), Expect = 5.0e-21
Identity = 81/237 (34.18%), Postives = 101/237 (42.62%), Query Frame = 0


Query: 7   GRPLSFRWNGVLAASEQSANMLLTYRQIFDQLIHSQIIWTPYMSDIVTLLHDRCHNGQDV 66
           GRPLSFRW+GV AASEQS NMLL YR  FD+L  SQI WTPY  DI+  L  RC +GQ V
Sbjct: 343 GRPLSFRWSGVQAASEQSGNMLLIYRWTFDRLSRSQINWTPYTPDIMASLPVRCQSGQAV 402

Query: 67  ------------------------------------------------------------ 126
                                                                       
Sbjct: 403 WTYVGPLICFHLVEKHQPDRVLRQFNMLQTPPAISYTDQRLHQIDLRGKHDQDWRRIHAE 462

Query: 127 ------------------------DN------------------------NFIQDVHAYS 136
                                   +N                        +F+ +V  +S
Sbjct: 463 HIGVWNSRYDFRVEAPTTSEPTVSENYFVWYRSITRRFITQEGAFYHCMYDFVDEVQTFS 522

[Close]

BLAST of PI0019496 vs. NCBI nr
Match: KAA0042980.1 (serine/threonine-protein phosphatase 7 long form-like protein isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 111.7 bits (278), Expect = 5.0e-21
Identity = 81/237 (34.18%), Postives = 101/237 (42.62%), Query Frame = 0


Query: 7   GRPLSFRWNGVLAASEQSANMLLTYRQIFDQLIHSQIIWTPYMSDIVTLLHDRCHNGQDV 66
           GRPLSFRW+GV AASEQS NMLL YR  FD+L  SQI WTPY  DI+  L  RC +GQ V
Sbjct: 696 GRPLSFRWSGVQAASEQSGNMLLIYRWTFDRLSRSQINWTPYTPDIMASLPVRCQSGQAV 755

Query: 67  ------------------------------------------------------------ 126
                                                                       
Sbjct: 756 WTYVGPLICFHLVEKHQPDRVLRQFNMLQTPPAISYTDQRLHQIDLRGKHDQDWRRIHAE 815

Query: 127 ------------------------DN------------------------NFIQDVHAYS 136
                                   +N                        +F+ +V  +S
Sbjct: 816 HIGVWNSRYDFRVEAPTTSEPTISENYFVWYRSITRRFITQEGAFYHCMYDFVDEVQTFS 875

[Close]

BLAST of PI0019496 vs. NCBI nr
Match: KAA0051993.1 (serine/threonine-protein phosphatase 7 long form-like protein isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 111.7 bits (278), Expect = 5.0e-21
Identity = 81/237 (34.18%), Postives = 101/237 (42.62%), Query Frame = 0


Query: 7   GRPLSFRWNGVLAASEQSANMLLTYRQIFDQLIHSQIIWTPYMSDIVTLLHDRCHNGQDV 66
           GRPLSFRW+GV AASEQS NMLL YR  FD+L  SQI WTPY  DI+  L  RC +GQ V
Sbjct: 304 GRPLSFRWSGVQAASEQSGNMLLIYRWTFDRLSRSQINWTPYTPDIMASLPVRCQSGQAV 363

Query: 67  ------------------------------------------------------------ 126
                                                                       
Sbjct: 364 WTYVGPLICFHLVEKHQPDRVLRQFNMLQTPPAISYTDQRLHQIDLRGKHDQDWRRIHAE 423

Query: 127 ------------------------DN------------------------NFIQDVHAYS 136
                                   +N                        +F+ +V  +S
Sbjct: 424 HIGVWNSRYDFRVEAPTTSEPTVSENYFVWYRSITRRFITQEGAFYHCMYDFVDEVQTFS 483

The following BLAST results are available for this feature:

BLAST of PI0019496 vs.


Match Name	E-value	Identity	Description

BLAST of PI0019496 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S4E383	1.8e-32	41.63	serine/threonine-protein phosphatase 7 long form homolog isoform X1 OS=Cucumis m...	[more]
A0A1S3CBQ7	1.8e-32	41.63	serine/threonine-protein phosphatase 7 long form homolog isoform X2 OS=Cucumis m...	[more]
A0A5A7TSW1	2.4e-21	34.18	Serine/threonine-protein phosphatase 7 long form-like protein isoform X1 OS=Cucu...	[more]
A0A5D3BUF5	2.4e-21	34.18	Serine/threonine-protein phosphatase 7 long form-like protein isoform X1 OS=Cucu...	[more]
A0A5A7TI34	2.4e-21	34.18	Serine/threonine-protein phosphatase 7 long form-like protein isoform X1 OS=Cucu...	[more]

BLAST of PI0019496 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_016902435.1	3.7e-32	41.63	PREDICTED: serine/threonine-protein phosphatase 7 long form homolog isoform X1 [...	[more]
XP_008459571.1	3.7e-32	41.63	PREDICTED: serine/threonine-protein phosphatase 7 long form homolog isoform X2 [...	[more]
TYK03303.1	5.0e-21	34.18	serine/threonine-protein phosphatase 7 long form-like protein isoform X1 [Cucumi...	[more]
KAA0042980.1	5.0e-21	34.18	serine/threonine-protein phosphatase 7 long form-like protein isoform X1 [Cucumi...	[more]
KAA0051993.1	5.0e-21	34.18	serine/threonine-protein phosphatase 7 long form-like protein isoform X1 [Cucumi...	[more]

BLAST of PI0019496 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 112..128
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 112..136

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0019496.1	PI0019496.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010073	meristem maintenance