PI0019451 (gene) Melon (PI 482460) v1

Overview


Name	PI0019451
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	Glycine-rich RNA-binding protein 2
Location	chr02: 23336031 .. 23340360 (+)
RNA-Seq Expression	PI0019451
Synteny	PI0019451

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATAAGCAATATCGCAGGTAGGAGTTTATGTTGATGGACATATTGTTGATAAGAGTCGGACCATTATAGATTTTGTTATATTTGTACGTTATCGATTGCTATTCTAAAAGGTTCTACTTATTGCAATTAATCTTTCTAGAGTTTATGTTTTCAATTTATCTATTATGATTTTGGTCACTAATTGTTAGTTAACCCTTCGATTAGTAGTTAAATTATAAATAAAAATTAGTTCTTGATTTTTTAAGTTTAATATTATTGATAGGGAAAAAAGTATATATAATCTTGATCGTATATTTACATCTTCATTTGTAACGTTGTGTATGTCTCAAATTGGTGAGGAAAACATCTTATGGGGGACGTTCATCGTTAAAGATTAGGCGAAATTGTAACATGTCATATTTTATGTGTGGACTCGTTAGTGAAATTGGACGAAAAATAACCAACCAACAACACCAATCTAGTCCACATAGTTCGATTTTTTATTTAACTTATTCCAAACATGTATGATTAGGCTGACTGGATTTCTAATGTAATTCAATTTTTAAACCTAATCAAATGAGCTTAGGTAAATTTATCTAATTCCTATGCACACCAAGTCGTGATTAATAGTTATCGTTGATGATATGAAGTGTCATTGGACTAGGGAAAAACCTAGGTGTATGGCAACCAGAAGTAAAACTTATAAGCTAGGATGTTTATTATTTGTTTTGGTTGGTCGATAGTGTGCATGGAGACAGGTGCAACCTATGGAACAACCCAAATATGTTACTTTGTCTCGATTTTGAGATCACACGCCGCTAGAATATTTTTTTCTGCCCCAATTATTATTATTATTATTTTTTCTCATGCTTTAAATATGTAACAATTTATTTACTATCTTGAAAATTACTATCAAGACTCAATAAAATTTTATCCAGCTAGATTAATAAATAAATAAATAGAAATTTAATATGTTTATAAGATACAAAGTCTAAACTGCTAAGTCATAAAAATTGACATTTAATCCCAAAGCGAGCTTAGCTCAACAACAACTAACATGACCTTCAATTTTTTAGGTCAAAAGTTCAATCTCTCATCTCAATCGTTGTCTTAAAAAAAAAAAAAAAAACCAAATGATTACCAATACAGGTCATGCATATTATCATTACAAAACAAAATTTAGGGAATAAATCATTACCACGTTAGTCCAATATTATTCTTATAAAACCATAATTATCAAATAAGACCCACATAGCCAAAGTGAGTATTAGCTCTACCATAATTGACATGACTTCGAATCATTGAGGTAAGAGGTTTGGATCTCTCGAATAATTACCAAACATATAATAATGTAAATTTTGTCTTTTAGTGGTTTAACTTTGTTGTCGATGTGGATGTTATTATTATTACTACCCCAAATTAAAAACTAGAGAATTTATTACCACTTTAGCCCAAATACTAATCTTACAAAATTATGATAAGTTTTATAAATTTGTCAAAAAGTCTAAAATTTCATATACAAAGATATTTTTTTTTCGCGTCCTTAATTCGCACCGTCATCAATCGATCTGACGGCCCAGATTTCCCCTGCCTCCCTCTATATATTTGCTTCATTTCTCACATTCGGCATAAACCACCCAACTGATCAGTGAAGCTTCTAGGGTTTTTGCATAGCGAGCAAAAGCTGAAGAAGAAGAACAAGGTTTGGTCTATACTCACTTCATCATTTCTATATGTTTCTTCTTCTTGATCGTTATCTTGTTGTTTGTTTATGCTTTTTTGACTGTATTTCTTACATGATCGTTGAAAAATGTTTGCACTAGGACACTCGATCGATGTGTTCGTATTATTCTTCAAGTATTTTTCCCACTGGGTTTTAGGATTTGGGAACTGGATGAAATGATAGTAGCAAATAGGCGACGAGTCTTTTGTATCTCACCTTTTACGTATTCAAACTCTTTATCACGGGCTGTTTTTCATTTTTGTTTGGGTCTTGTTTTGGATATTGGGTTTCATTTCTTACGATATATAAATTAGTCTTGGTGGTACGGAAGACGGCTCACCTTGTTGTGATTGAAATGTTCTTATTAACCACCGAAACAGAGCTTATACACGTTGGCGTTTTAGGGATAGGTATGGATGTTCTTACGTACACACGTACCGTATTTCACTCATTTCCAGCGTTCGATTTCTTGCACTCTCTTGTTTAGTCGTTTTTGGTATGTTCTTGCAATGAGTTTGTTAAGAAATGTGTTGCGACAGTGTAATGTGTGTACTCTAATTTGTTGAAAACAGAAGGTGAATGTAATTTAATTTGAGGCTAACTGGAAACTTTCATTTTTGCCTTTGAATCGTTGGTTAATTATTCGCCATTTATTTCTTCCAGGTTGCTTCAAAATGGCTTTTTTAAGTAAGTTTGGAAATATACTGAGGCAGGGTGCAAATAAGAGGATTGGATTAGATTTGCAGCGTTCCAGTTTGTCTATCTGTCAAGCTGTACGATGGATGTCTTCCATGGAAAGTTCAAAACTTTTTGTCGGAGGTTCTCTGAGAATACTTCGTTATTGTTCTTATTATCTTTTTCTTTAAAGAACGTGTATACGTCAATTTATTTTTCCTTATCTTGATTATTGTGATTGTATCTACGTTTGCCAGGTATTTCGTTCGGCACTGATGATCAAAGTCTTAGGGAAGCCTTTACTAAATATGGGGAAGTAGTCGAAGGTATATCCCCTAACTCAGTTACAATGACTGTCAAAGGTTATCTTTGAAGTATACGTAACATAAATGCAATATGGAATAAACAAACTTTGTAACCTGTATGGTTAGATCTGCTCAAGGAATTATGTCTCTTTATAAGTTTTAAATATTTTCTGCAATAAGGCTTGGCCAGTGGCTCCGGGGGGAGGGGGGTGTGACTGGATACTGCTTGTTGTGCTAGTGGATTGTGTCAAGTCAGAATTTTTTATAGATTTTGCTTTCCTTGTTTACCCTTCTTTTCTTTGCCACCATGATAGCTAGGGTCATCGTAGACCGTGAAACTGGAAGATCCAGAGGATTTGGATTTGTGACTTACACTTCTAGTGAGGAGGCCTCTAGTGCCATTCAGGCATTGGATGGACAGGTAATAATTCTGCAGTCGACACATTGAGATTAAAAAGGATAAAACGTTGTGTTATATTCATATGCTGCAATATATTGCAGAATTAATGCATCACACCTCATATAATGCTTCATGGCAGTTGTCTGCGTTCTTAACGACTGTCTTACTTTTAAGAAGATGACTGTATCTAGTTGATGTATTTCTGTTAATTGATCTTGTGCGAATGTCTTCATGCAATACCTTAAATGCCATATTTTTCTGTAGCAAATATTAGTGTGATACAGCGAAATTGAGAGCTTTAAAGTGTGGAGTTGTAGTAGGCCATTCTTTGTACTATGCTCAAAAGTTAATTTGCGTTATAATTTAAAGTGTTTGAGGATCTGTCTTCTGTGATAAATGGTGTGTTGTATATTGGAGGCATTCCTTTCTACTTGTATTCTCAAATAGCTGGTAATGTTAGCATACAAAATTGCCATTTAGATCTTTGTAGAAAAATAAATGTCTATAGTGATGAGTGATTAAGATGTGCGGAATTTGGAGGCTTGTTCCACTTTCAGATCTATGAGAACTAGTCATATTAAACCGACTGGCTAATTATCCATATTCATTATTTTTAGTTAATTTAACTCTGTCCTCTACATTTGCTAAACAGAAAGTTTAATGGCTCAGGTTATTAATATTTTTGTTTCATCTTCAACAGGACCTGCATGGTCGCCGAGTGAGAGTGAATTATGCTAATGATAAACCTCGTAGTTTTGGTGGTGGTGGCAGTTATGGTGGCGGTTATGGTGGTGGTGGCAGTTATGGTGGTGGCAGCGGTTATGGTGGTGGCGGTGGTTATGGTGGTGGTGGGGGTTATGGAGGTGGTGGCAGTGGGGGTTATGGTGGTGGTGGTGCTGGAGGTTATGGTGATGGTAGTGGTGGATATTCTGGGATGGCAGGAGGCTATAGCCAAGGAAGTGGAGGAAGTTTTAGTAACGATTATGCCAGTGACAACCGTGGAAGTGTTGGTGGCTTTGGTGGAAATGATGCTGGCTTCAACGCTGCTAGCAATTTTGCTACTGGAAACACATACGGTAGTGAAACCAATGCAGGTTTTGGTTCAGGCTCTGGGGTTGGAGGATATACTGGTGGGGAACAATTTGGCAGCAACGAAACAAACACCATGAATGCATCTGGGGAGGAGCAATTCAAAGGAAATGCCAGGGACGAAGACGACGCAGACGACTTTGCCAAAAGAGCCTGA

mRNA sequence

ATGATAAGCAATATCGCAGTGAAGCTTCTAGGGTTTTTGCATAGCGAGCAAAAGCTGAAGAAGAAGAACAAGACGGCTCACCTTGTTGTGATTGAAATGTTCTTATTAACCACCGAAACAGAGCTTATACACGTTGGCGTTTTAGGGATAGGTTGCTTCAAAATGGCTTTTTTAAGTAAGTTTGGAAATATACTGAGGCAGGGTGCAAATAAGAGGATTGGATTAGATTTGCAGCGTTCCAGTTTGTCTATCTGTCAAGCTGTACGATGGATGTCTTCCATGGAAAGTTCAAAACTTTTTGTCGGAGGTATTTCGTTCGGCACTGATGATCAAAGTCTTAGGGAAGCCTTTACTAAATATGGGGAAGTAGTCGAAGCTAGGGTCATCGTAGACCGTGAAACTGGAAGATCCAGAGGATTTGGATTTGTGACTTACACTTCTAGTGAGGAGGCCTCTAGTGCCATTCAGGCATTGGATGGACAGGACCTGCATGGTCGCCGAGTGAGAGTGAATTATGCTAATGATAAACCTCGTAGTTTTGGTGGTGGTGGCAGTTATGGTGGCGGTTATGGTGGTGGTGGCAGTTATGGTGGTGGCAGCGGTTATGGTGGTGGCGGTGGTTATGGTGGTGGTGGGGGTTATGGAGGTGGTGGCAGTGGGGGTTATGGTGGTGGTGGTGCTGGAGGTTATGGTGATGGTAGTGGTGGATATTCTGGGATGGCAGGAGGCTATAGCCAAGGAAGTGGAGGAAGTTTTAGTAACGATTATGCCAGTGACAACCGTGGAAGTGTTGGTGGCTTTGGTGGAAATGATGCTGGCTTCAACGCTGCTAGCAATTTTGCTACTGGAAACACATACGGTAGTGAAACCAATGCAGGTTTTGGTTCAGGCTCTGGGGTTGGAGGATATACTGGTGGGGAACAATTTGGCAGCAACGAAACAAACACCATGAATGCATCTGGGGAGGAGCAATTCAAAGGAAATGCCAGGGACGAAGACGACGCAGACGACTTTGCCAAAAGAGCCTGA

Coding sequence (CDS)

ATGATAAGCAATATCGCAGTGAAGCTTCTAGGGTTTTTGCATAGCGAGCAAAAGCTGAAGAAGAAGAACAAGACGGCTCACCTTGTTGTGATTGAAATGTTCTTATTAACCACCGAAACAGAGCTTATACACGTTGGCGTTTTAGGGATAGGTTGCTTCAAAATGGCTTTTTTAAGTAAGTTTGGAAATATACTGAGGCAGGGTGCAAATAAGAGGATTGGATTAGATTTGCAGCGTTCCAGTTTGTCTATCTGTCAAGCTGTACGATGGATGTCTTCCATGGAAAGTTCAAAACTTTTTGTCGGAGGTATTTCGTTCGGCACTGATGATCAAAGTCTTAGGGAAGCCTTTACTAAATATGGGGAAGTAGTCGAAGCTAGGGTCATCGTAGACCGTGAAACTGGAAGATCCAGAGGATTTGGATTTGTGACTTACACTTCTAGTGAGGAGGCCTCTAGTGCCATTCAGGCATTGGATGGACAGGACCTGCATGGTCGCCGAGTGAGAGTGAATTATGCTAATGATAAACCTCGTAGTTTTGGTGGTGGTGGCAGTTATGGTGGCGGTTATGGTGGTGGTGGCAGTTATGGTGGTGGCAGCGGTTATGGTGGTGGCGGTGGTTATGGTGGTGGTGGGGGTTATGGAGGTGGTGGCAGTGGGGGTTATGGTGGTGGTGGTGCTGGAGGTTATGGTGATGGTAGTGGTGGATATTCTGGGATGGCAGGAGGCTATAGCCAAGGAAGTGGAGGAAGTTTTAGTAACGATTATGCCAGTGACAACCGTGGAAGTGTTGGTGGCTTTGGTGGAAATGATGCTGGCTTCAACGCTGCTAGCAATTTTGCTACTGGAAACACATACGGTAGTGAAACCAATGCAGGTTTTGGTTCAGGCTCTGGGGTTGGAGGATATACTGGTGGGGAACAATTTGGCAGCAACGAAACAAACACCATGAATGCATCTGGGGAGGAGCAATTCAAAGGAAATGCCAGGGACGAAGACGACGCAGACGACTTTGCCAAAAGAGCCTGA

Protein sequence

MISNIAVKLLGFLHSEQKLKKKNKTAHLVVIEMFLLTTETELIHVGVLGIGCFKMAFLSKFGNILRQGANKRIGLDLQRSSLSICQAVRWMSSMESSKLFVGGISFGTDDQSLREAFTKYGEVVEARVIVDRETGRSRGFGFVTYTSSEEASSAIQALDGQDLHGRRVRVNYANDKPRSFGGGGSYGGGYGGGGSYGGGSGYGGGGGYGGGGGYGGGGSGGYGGGGAGGYGDGSGGYSGMAGGYSQGSGGSFSNDYASDNRGSVGGFGGNDAGFNAASNFATGNTYGSETNAGFGSGSGVGGYTGGEQFGSNETNTMNASGEEQFKGNARDEDDADDFAKRA

Homology

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BLAST of PI0019451 vs. ExPASy Swiss-Prot
Match: Q9FNR1 (Glycine-rich RNA-binding protein 3, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=RBG3 PE=1 SV=1)

HSP 1 Score: 194.1 bits (492), Expect = 2.5e-48
Identity = 172/317 (54.26%), Postives = 204/317 (64.35%), Query Frame = 0


Query: 55  MAFLSKFGNILRQGANKRIGLDLQRSSLSICQAVRWMSSMESSKLFVGGISFGTDDQSLR 114
           MAFLSKFGNIL+Q  NK++   +  SS S+ QA+R MS   SSKLF+GG+++  D+ SLR
Sbjct: 1   MAFLSKFGNILKQTTNKQLNAQVSLSSPSLFQAIRCMS---SSKLFIGGMAYSMDEDSLR 60

Query: 115 EAFTKYGEVVEARVIVDRETGRSRGFGFVTYTSSEEASSAIQALDGQDLHGRRVRVNYAN 174
           EAFTKYGEVV+ RVI+DRETGRSRGFGFVT+TSSE ASSAIQALDG+DLHGR V+VNYAN
Sbjct: 61  EAFTKYGEVVDTRVILDRETGRSRGFGFVTFTSSEAASSAIQALDGRDLHGRVVKVNYAN 120

Query: 175 DKPRSFG-GGGSY---GGGYGGGGSYGGGS-GYGGGGGYGG---------GGGYGGGGSG 234
           D+    G GGG Y   GGGYGG G YGGG+ GYGG GGYGG         GGGYGG  +G
Sbjct: 121 DRTSGGGFGGGGYGGGGGGYGGSGGYGGGAGGYGGSGGYGGGAGGYGGNSGGGYGGNAAG 180

Query: 235 GYGGGGAGGYGDGSGGYSGMAGGY-SQGSGGSFSNDYASDNRGSVGGFGGNDAGFNAASN 294
           GYGG GAGGYG  + G+ G  GGY S G  GS  N Y   +  S G  G     +N +S 
Sbjct: 181 GYGGSGAGGYGGDATGHGGAGGGYGSSGGFGSSGNTYGEGSSASAGAVG----DYNGSSG 240

Query: 295 FATGNTYGSETNAGFGSGSGVGGYTGG--EQFGSNETNTM---NASGEEQF----KGNAR 343
           + + NTYGS +N GF   S  GG   G   QFG + T         GE+QF    K   +
Sbjct: 241 YGSANTYGS-SNGGFAGDSQFGGSPVGNSSQFGGDNTQFTAGGQFGGEDQFGSMEKSETK 300

[Close]

BLAST of PI0019451 vs. ExPASy Swiss-Prot
Match: Q9C909 (Glycine-rich RNA-binding protein 5, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=RBG5 PE=1 SV=1)

HSP 1 Score: 127.5 bits (319), Expect = 2.9e-28
Identity = 153/315 (48.57%), Postives = 183/315 (58.10%), Query Frame = 0


Query: 55  MAFLSKFGNILRQGANKRIGLDLQRSSLSICQAVRWMSSMESSKLFVGGISFGTDDQSLR 114
           MAFLSK G +  Q ++         +S S+ Q++R MS   SSK+FVGGIS+ TD+  LR
Sbjct: 1   MAFLSKVGRLFSQTSSH------VTASSSMLQSIRCMS---SSKIFVGGISYSTDEFGLR 60

Query: 115 EAFTKYGEVVEARVIVDRETGRSRGFGFVTYTSSEEASSAIQALDGQDLHGRRVRVNYAN 174
           EAF+KYGEVV+A++IVDRETGRSRGF FVT+TS+EEAS+A+Q LDGQDLHGRR+RVNYA 
Sbjct: 61  EAFSKYGEVVDAKIIVDRETGRSRGFAFVTFTSTEEASNAMQ-LDGQDLHGRRIRVNYAT 120

Query: 175 DKPRSFGG------GGSYGGGYGGGGSYGGGSGYGGGGGYGGGGGYGG--GGSGGYG--- 234
           ++   FGG      GG YG   GG G+  GG G GG GGYGG   Y G  GG GGYG   
Sbjct: 121 ERGSGFGGRGFGGPGGGYGASDGGYGAPAGGYG-GGAGGYGGNSSYSGNAGGGGGYGGNS 180

Query: 235 --GGGAGGYGDGSGGYSGMAGGYSQGSGGSFSNDYASDNRGSVGGFGGNDAGFNAASNFA 294
             GG AGGYG G+  YSG A G   G GG  SN       G  GG GG++       NFA
Sbjct: 181 SYGGNAGGYG-GNPPYSGNAVG---GGGGYGSNFGGGGGYGVAGGVGGSE-------NFA 240

Query: 295 TGNTYGSETNAGFG----SGSGVG---------GYTGGEQFGSNETNTMNASGEEQFKGN 343
                GS TNAGF     S   +G         G  G EQFG ++    +A       G 
Sbjct: 241 ----QGSSTNAGFDDKFESNQPLGNDTDHQTESGLGGDEQFGGSDNQFGDAENGNTENGP 289

[Close]

BLAST of PI0019451 vs. ExPASy Swiss-Prot
Match: Q9SVM8 (Glycine-rich RNA-binding protein 2, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=RBG2 PE=1 SV=1)

HSP 1 Score: 125.2 bits (313), Expect = 1.5e-27
Identity = 91/167 (54.49%), Postives = 119/167 (71.26%), Query Frame = 0


Query: 55  MAFLSKFGNILRQGANKRIGLDLQRSSLSICQAVRWMSSMESSKLFVGGISFGTDDQSLR 114
           MAF +K G +LRQ  +    + +     S+  ++R M    S+KLF+GG+S+GTDD SLR
Sbjct: 1   MAFCNKLGGLLRQNISSNGNVPV----TSMLGSLRLM----STKLFIGGLSWGTDDASLR 60

Query: 115 EAFTKYGEVVEARVIVDRETGRSRGFGFVTYTSSEEASSAIQALDGQDLHGRRVRVNYAN 174
           +AF  +G+VV+A+VIVDRETGRSRGFGFV +     A++AI  +DG++L+GR +RVN AN
Sbjct: 61  DAFAHFGDVVDAKVIVDRETGRSRGFGFVNFNDEGAATAAISEMDGKELNGRHIRVNPAN 120

Query: 175 DK---PRSFGGGGSYGGGYGGGGSYGGGSGYGGGGGYGGGGGYGGGG 219
           D+   PR++GGGG Y G  GGGG  GGG GYGGGGG  GGGG GGGG
Sbjct: 121 DRPSAPRAYGGGGGYSG--GGGGYGGGGGGYGGGGGGYGGGGDGGGG 157

[Close]

BLAST of PI0019451 vs. ExPASy Swiss-Prot
Match: Q43472 (Glycine-rich RNA-binding protein blt801 OS=Hordeum vulgare OX=4513 GN=blt801 PE=1 SV=1)

HSP 1 Score: 104.0 bits (258), Expect = 3.5e-21
Identity = 87/152 (57.24%), Postives = 105/152 (69.08%), Query Frame = 0


Query: 98  KLFVGGISFGTDDQSLREAFTKYGEVVEARVIVDRETGRSRGFGFVTYTSSEEASSAIQA 157
           + FVGG+ + TDDQSL+ AF+KYG+V+++++I DRETGRSRGFGFVT+ S E    AI+A
Sbjct: 7   RCFVGGLRWATDDQSLQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEA 66

Query: 158 LDGQDLHGRRVRVNYANDKPRSFGGG-GSYGGGYGGGGSYGGGSGYGGGGGYGGGGGYGG 217
           ++GQDL GR + VN A  +    GGG G  GGGYGG    GGG GYGGGGG  GGG  GG
Sbjct: 67  MNGQDLDGRNITVNEAQSRRSDGGGGFGGGGGGYGGQRREGGGGGYGGGGGGYGGGRSGG 126

Query: 218 GGSGGYGGGGAGGYGDGSGGYSGMAGGYSQGS 249
           GG  G   GG GGYG G GGY G  GG   G+
Sbjct: 127 GGGYGSRDGGGGGYGGGGGGYGGSRGGSGGGN 158

[Close]

BLAST of PI0019451 vs. ExPASy Swiss-Prot
Match: P10979 (Glycine-rich RNA-binding, abscisic acid-inducible protein OS=Zea mays OX=4577 GN=RAB15 PE=1 SV=1)

HSP 1 Score: 95.5 bits (236), Expect = 1.2e-18
Identity = 84/149 (56.38%), Postives = 105/149 (70.47%), Query Frame = 0


Query: 98  KLFVGGISFGTDDQSLREAFTKYGEVVEARVIVDRETGRSRGFGFVTYTSSEEASSAIQA 157
           + FVGG+++ T ++SL  AF  YGE+++++VI DRETGRSRGFGFVT++S      AI+ 
Sbjct: 9   RCFVGGLAWATSNESLENAFASYGEILDSKVITDRETGRSRGFGFVTFSSENSMLDAIEN 68

Query: 158 LDGQDLHGRRVRVNYANDKPRSFGGGGSYGGGYGGGGSYGGG---SGYGGGGGYGG---G 217
           ++G++L GR + VN A  +    GGGG YGGG GGGG YGGG    GYGGGGGYGG   G
Sbjct: 69  MNGKELDGRNITVNQAQSRGGG-GGGGGYGGGRGGGG-YGGGRRDGGYGGGGGYGGRREG 128

Query: 218 GGYGGGGSGGYGG---GGAGGYGDGSGGY 238
           GG G GG GGYGG   GG GGYG G GG+
Sbjct: 129 GGGGYGGGGGYGGRREGGGGGYGGGGGGW 155

[Close]

BLAST of PI0019451 vs. ExPASy TrEMBL
Match: A0A5A7UWK3 (Glycine-rich RNA-binding protein 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold274G002990 PE=4 SV=1)

HSP 1 Score: 374.0 bits (959), Expect = 6.6e-100
Identity = 242/295 (82.03%), Postives = 256/295 (86.78%), Query Frame = 0


Query: 55  MAFLSKFGNILRQGANKRIGLDLQRSSLSICQAVRWMSSMESSKLFVGGISFGTDDQSLR 114
           MAFLSKFGNILRQGANKR+GLDL RSSLS+CQAVRWMSSMESSK+FVGGISF TDDQSLR
Sbjct: 1   MAFLSKFGNILRQGANKRVGLDLHRSSLSLCQAVRWMSSMESSKVFVGGISFSTDDQSLR 60

Query: 115 EAFTKYGEVVEARVIVDRETGRSRGFGFVTYTSSEEASSAIQALDGQDLHGRRVRVNYAN 174
           EAFTKYGEVVEARVIVDRETGRSRGFGFVTYTSSEEASSAIQALDGQDLHGRRVRVNYAN
Sbjct: 61  EAFTKYGEVVEARVIVDRETGRSRGFGFVTYTSSEEASSAIQALDGQDLHGRRVRVNYAN 120

Query: 175 D-KPRSFGGGGSYGGGYG--GGGSYGGGSGYGGGGGYGGGGGYGGGGSGGYGGGGAGGYG 234
           D +PR FGGGG YGGG G  GGG YGGG GYG GGGYG GGGYGGGG G YGGGG  G G
Sbjct: 121 DNRPRGFGGGGGYGGGGGGYGGGGYGGGGGYGAGGGYGAGGGYGGGG-GAYGGGGYSGGG 180

Query: 235 DGSGGYSGMAGGYSQGSGGSFSNDYASDNRGSVGGFGGNDAGFNAASNFATGNTYGSETN 294
            G        G Y +GSGG++SNDYASDNRGSVGGFGGNDAG+NAASNFA+GNT+GSE+N
Sbjct: 181 AG--------GNYGRGSGGNYSNDYASDNRGSVGGFGGNDAGYNAASNFASGNTFGSESN 240

Query: 295 AGFGSGSGVGGY----TGGEQFGSNETNTMNASGEEQFKGNARDEDDADDFAKRA 343
           AGFGSGSG G Y    +G  QFGSNETN+MNASGEEQF+ NARD DD DDFAKRA
Sbjct: 241 AGFGSGSG-GDYFANGSGEGQFGSNETNSMNASGEEQFEENARDGDDTDDFAKRA 285

[Close]

BLAST of PI0019451 vs. ExPASy TrEMBL
Match: A0A1S3BVW4 (glycine-rich RNA-binding protein 2, mitochondrial-like OS=Cucumis melo OX=3656 GN=LOC103494047 PE=4 SV=1)

HSP 1 Score: 374.0 bits (959), Expect = 6.6e-100
Identity = 242/295 (82.03%), Postives = 256/295 (86.78%), Query Frame = 0


Query: 55  MAFLSKFGNILRQGANKRIGLDLQRSSLSICQAVRWMSSMESSKLFVGGISFGTDDQSLR 114
           MAFLSKFGNILRQGANKR+GLDL RSSLS+CQAVRWMSSMESSK+FVGGISF TDDQSLR
Sbjct: 1   MAFLSKFGNILRQGANKRVGLDLHRSSLSLCQAVRWMSSMESSKVFVGGISFSTDDQSLR 60

Query: 115 EAFTKYGEVVEARVIVDRETGRSRGFGFVTYTSSEEASSAIQALDGQDLHGRRVRVNYAN 174
           EAFTKYGEVVEARVIVDRETGRSRGFGFVTYTSSEEASSAIQALDGQDLHGRRVRVNYAN
Sbjct: 61  EAFTKYGEVVEARVIVDRETGRSRGFGFVTYTSSEEASSAIQALDGQDLHGRRVRVNYAN 120

Query: 175 D-KPRSFGGGGSYGGGYG--GGGSYGGGSGYGGGGGYGGGGGYGGGGSGGYGGGGAGGYG 234
           D +PR FGGGG YGGG G  GGG YGGG GYG GGGYG GGGYGGGG G YGGGG  G G
Sbjct: 121 DNRPRGFGGGGGYGGGGGGYGGGGYGGGGGYGAGGGYGAGGGYGGGG-GAYGGGGYSGGG 180

Query: 235 DGSGGYSGMAGGYSQGSGGSFSNDYASDNRGSVGGFGGNDAGFNAASNFATGNTYGSETN 294
            G        G Y +GSGG++SNDYASDNRGSVGGFGGNDAG+NAASNFA+GNT+GSE+N
Sbjct: 181 AG--------GNYGRGSGGNYSNDYASDNRGSVGGFGGNDAGYNAASNFASGNTFGSESN 240

Query: 295 AGFGSGSGVGGY----TGGEQFGSNETNTMNASGEEQFKGNARDEDDADDFAKRA 343
           AGFGSGSG G Y    +G  QFGSNETN+MNASGEEQF+ NARD DD DDFAKRA
Sbjct: 241 AGFGSGSG-GDYFANGSGEGQFGSNETNSMNASGEEQFEENARDGDDTDDFAKRA 285

[Close]

BLAST of PI0019451 vs. ExPASy TrEMBL
Match: A0A0A0LPA9 (RRM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G013770 PE=4 SV=1)

HSP 1 Score: 372.1 bits (954), Expect = 2.5e-99
Identity = 241/289 (83.39%), Postives = 254/289 (87.89%), Query Frame = 0


Query: 55  MAFLSKFGNILRQGANKRIGLDLQRSSLSICQAVRWMSSMESSKLFVGGISFGTDDQSLR 114
           MAFLSKFGNILRQGANKRIGLDL RSSLS+ QAVRWMSSMESSK+FVGGISF TDDQSLR
Sbjct: 1   MAFLSKFGNILRQGANKRIGLDLHRSSLSLSQAVRWMSSMESSKVFVGGISFSTDDQSLR 60

Query: 115 EAFTKYGEVVEARVIVDRETGRSRGFGFVTYTSSEEASSAIQALDGQDLHGRRVRVNYAN 174
           EAFTKYGEV+EARVIVDRETGRSRGFGFVTYTSSEEASSAIQALDGQDLHGRRVRVNYAN
Sbjct: 61  EAFTKYGEVIEARVIVDRETGRSRGFGFVTYTSSEEASSAIQALDGQDLHGRRVRVNYAN 120

Query: 175 DKPRSFGGGGSYGGGYGGGGSYGGGSGYGGGGGYGGGGGYGGGGSGGYGGGGAGGYGDGS 234
           D+ R  GGGG YGGG  GGG YGGG GYGGGGGYG GGG G  G GGY GGGAGGY    
Sbjct: 121 DRAR--GGGGGYGGGGYGGGGYGGGGGYGGGGGYGAGGG-GAYGGGGYSGGGAGGY---- 180

Query: 235 GGYSGMAGG-YSQGSGGSFSNDYASDNRGSVGGFGGNDAGFNAASNFATGNTYGSETNAG 294
           GGYSGM GG Y  GSGG+FSNDYASDNRGSVGGFGGNDAG+NAASNFATGNT+GSE+NAG
Sbjct: 181 GGYSGMGGGNYGGGSGGNFSNDYASDNRGSVGGFGGNDAGYNAASNFATGNTFGSESNAG 240

Query: 295 FGSGSGVGGYTGGEQFGSNETNTMNASGEEQFKGNARDEDDADDFAKRA 343
           FGS S     + GEQFGSNETNTM ASGE+ F+ NARDEDD++DFAKRA
Sbjct: 241 FGS-SDYFAKSEGEQFGSNETNTMKASGEDHFEENARDEDDSNDFAKRA 281

[Close]

BLAST of PI0019451 vs. ExPASy TrEMBL
Match: A0A6J1EZK6 (glycine-rich RNA-binding protein 2, mitochondrial-like OS=Cucurbita moschata OX=3662 GN=LOC111440991 PE=4 SV=1)

HSP 1 Score: 334.0 bits (855), Expect = 7.6e-88
Identity = 231/315 (73.33%), Postives = 249/315 (79.05%), Query Frame = 0


Query: 55  MAFLSKFGNILRQGANKRIGLDLQRSSLSICQAVRWMSSMESSKLFVGGISFGTDDQSLR 114
           MAFLSK GNILRQGANKRIG DLQ  SLSICQAVRWMSSM+SSKLFVGGISF TDDQSLR
Sbjct: 1   MAFLSKVGNILRQGANKRIGSDLQAPSLSICQAVRWMSSMQSSKLFVGGISFSTDDQSLR 60

Query: 115 EAFTKYGEVVEARVIVDRETGRSRGFGFVTYTSSEEASSAIQALDGQDLHGRRVRVNYAN 174
           EAFTKYGEVVEAR+IVDRETGRSRGFGFVTYTSSEEASSAIQALDGQDLHGRRVRVNYAN
Sbjct: 61  EAFTKYGEVVEARIIVDRETGRSRGFGFVTYTSSEEASSAIQALDGQDLHGRRVRVNYAN 120

Query: 175 DKPRSFGGGGSYGGGYGGGGSYGGGSGYGGGGGYGGGGGYGGGGSGGYGGGGAGGYGDGS 234
           D+ R  G     GGGYGGGG YGGG GYGGGGGYGGGGGYG GG+GGYGGGG+GGYGDGS
Sbjct: 121 DRSRGVG-----GGGYGGGGGYGGG-GYGGGGGYGGGGGYGDGGAGGYGGGGSGGYGDGS 180

Query: 235 GG-----------YSGMAGGYSQGSGGSFSNDYASDNRGSV---GGFGGNDAGFNAASNF 294
           GG           YS   GG SQGSGG++ N++ASD+RGSV   GGFGGNDAG+N ASNF
Sbjct: 181 GGFSTTGYSSGGNYSNNFGGGSQGSGGNYGNEFASDSRGSVSTGGGFGGNDAGYN-ASNF 240

Query: 295 ATGNTYGSETNAGFG---------SGSGVGGYTGGEQFGSNETNTMNASGE---EQFKGN 343
           + G++     + G G           SG GGYTGG+QF S ET+TMNA G    EQ +GN
Sbjct: 241 SGGDSGNYNVSGGGGDYFSNRGSEESSGFGGYTGGDQFSSKETDTMNAPGSGLGEQLEGN 300

[Close]

BLAST of PI0019451 vs. ExPASy TrEMBL
Match: A0A6J1I7Z2 (glycine-rich RNA-binding protein 3, mitochondrial-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111470449 PE=4 SV=1)

HSP 1 Score: 329.7 bits (844), Expect = 1.4e-86
Identity = 228/319 (71.47%), Postives = 250/319 (78.37%), Query Frame = 0


Query: 55  MAFLSKFGNILRQGANKRIGLDLQRSSLSICQAVRWMSSMESSKLFVGGISFGTDDQSLR 114
           MAFLSK GNILRQGANK+IG DLQ SSLSICQAVRWMSSM+SSKLFVGGISF TDDQSLR
Sbjct: 1   MAFLSKVGNILRQGANKKIGSDLQASSLSICQAVRWMSSMQSSKLFVGGISFSTDDQSLR 60

Query: 115 EAFTKYGEVVEARVIVDRETGRSRGFGFVTYTSSEEASSAIQALDGQDLHGRRVRVNYAN 174
           EAFTKYGEVVEAR+IVDRETGRSRGFGFVTYTSSEEASSAIQALDGQDLHGRRVRVNYAN
Sbjct: 61  EAFTKYGEVVEARIIVDRETGRSRGFGFVTYTSSEEASSAIQALDGQDLHGRRVRVNYAN 120

Query: 175 DKPRSFGGGGSYGGGYGGGGSYGGGSGYGGGGGYG----GGGGYGGGGSGGYGGGGAGGY 234
           D+ R  G     GGGYGGGG YGGG GYGGGGGYG    GGGGYGGGG GGYGGGG+GGY
Sbjct: 121 DRSRGVG-----GGGYGGGGGYGGGGGYGGGGGYGGGGYGGGGYGGGGPGGYGGGGSGGY 180

Query: 235 GDGSGG-----------YSGMAGGYSQGSGGSFSNDYASDNRGSV---GGFGGNDAGFNA 294
           GDGSGG           Y+   GG SQG+GG++ N++ASD+RGSV   GGFGGNDAG+N 
Sbjct: 181 GDGSGGFSTTGYSSGGNYTNNFGGGSQGTGGNYGNEFASDSRGSVSTGGGFGGNDAGYN- 240

Query: 295 ASNFATGNTYGSETNAGFG---------SGSGVGGYTGGEQFGSNETNTMNASGE---EQ 343
           ASNF+ G++     + G G           SG GGYTGG+QF S ET++MNA G    EQ
Sbjct: 241 ASNFSGGDSGNYNVSGGGGDYFSNRGSEESSGFGGYTGGDQFSSKETDSMNAPGSGLGEQ 300

[Close]

BLAST of PI0019451 vs. NCBI nr
Match: XP_011648448.2 (glycine-rich RNA-binding protein blt801 [Cucumis sativus] >KAE8652435.1 hypothetical protein Csa_013177 [Cucumis sativus])

HSP 1 Score: 379.0 bits (972), Expect = 4.3e-101
Identity = 243/290 (83.79%), Postives = 257/290 (88.62%), Query Frame = 0


Query: 55  MAFLSKFGNILRQGANKRIGLDLQRSSLSICQAVRWMSSMESSKLFVGGISFGTDDQSLR 114
           MAFLSKFGNILRQGANKRIGLDL RSSLS+ QAVRWMSSMESSK+FVGGISF TDDQSLR
Sbjct: 1   MAFLSKFGNILRQGANKRIGLDLHRSSLSLSQAVRWMSSMESSKVFVGGISFSTDDQSLR 60

Query: 115 EAFTKYGEVVEARVIVDRETGRSRGFGFVTYTSSEEASSAIQALDGQDLHGRRVRVNYAN 174
           EAFTKYGEV+EARVIVDRETGRSRGFGFVTYTSSEEASSAIQALDGQDLHGRRVRVNYAN
Sbjct: 61  EAFTKYGEVIEARVIVDRETGRSRGFGFVTYTSSEEASSAIQALDGQDLHGRRVRVNYAN 120

Query: 175 DKPRSFGGGGSYGGGYGGGGSYGGGSGYGGGGGYGGGGGYGGGGSGGYGGGG-AGGYGDG 234
           D+ R  GGGG YGGG  GGG YGGG GYGGGGGYGGGGGYG GG G YGGGG +GG   G
Sbjct: 121 DRAR--GGGGGYGGGGYGGGGYGGGGGYGGGGGYGGGGGYGAGGGGAYGGGGYSGGGAGG 180

Query: 235 SGGYSGMAGG-YSQGSGGSFSNDYASDNRGSVGGFGGNDAGFNAASNFATGNTYGSETNA 294
            GGYSGM GG Y  GSGG+FSNDYASDNRGSVGGFGGNDAG+NAASNFATGNT+GSE+NA
Sbjct: 181 YGGYSGMGGGNYGGGSGGNFSNDYASDNRGSVGGFGGNDAGYNAASNFATGNTFGSESNA 240

Query: 295 GFGSGSGVGGYTGGEQFGSNETNTMNASGEEQFKGNARDEDDADDFAKRA 343
           GFGS S     + GEQFGSNETNTM ASGE+ F+ NARDEDD++DFAKRA
Sbjct: 241 GFGS-SDYFAKSEGEQFGSNETNTMKASGEDHFEENARDEDDSNDFAKRA 287

[Close]

BLAST of PI0019451 vs. NCBI nr
Match: XP_008453280.1 (PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like [Cucumis melo] >KAA0057995.1 glycine-rich RNA-binding protein 2 [Cucumis melo var. makuwa])

HSP 1 Score: 374.0 bits (959), Expect = 1.4e-99
Identity = 242/295 (82.03%), Postives = 256/295 (86.78%), Query Frame = 0


Query: 55  MAFLSKFGNILRQGANKRIGLDLQRSSLSICQAVRWMSSMESSKLFVGGISFGTDDQSLR 114
           MAFLSKFGNILRQGANKR+GLDL RSSLS+CQAVRWMSSMESSK+FVGGISF TDDQSLR
Sbjct: 1   MAFLSKFGNILRQGANKRVGLDLHRSSLSLCQAVRWMSSMESSKVFVGGISFSTDDQSLR 60

Query: 115 EAFTKYGEVVEARVIVDRETGRSRGFGFVTYTSSEEASSAIQALDGQDLHGRRVRVNYAN 174
           EAFTKYGEVVEARVIVDRETGRSRGFGFVTYTSSEEASSAIQALDGQDLHGRRVRVNYAN
Sbjct: 61  EAFTKYGEVVEARVIVDRETGRSRGFGFVTYTSSEEASSAIQALDGQDLHGRRVRVNYAN 120

Query: 175 D-KPRSFGGGGSYGGGYG--GGGSYGGGSGYGGGGGYGGGGGYGGGGSGGYGGGGAGGYG 234
           D +PR FGGGG YGGG G  GGG YGGG GYG GGGYG GGGYGGGG G YGGGG  G G
Sbjct: 121 DNRPRGFGGGGGYGGGGGGYGGGGYGGGGGYGAGGGYGAGGGYGGGG-GAYGGGGYSGGG 180

Query: 235 DGSGGYSGMAGGYSQGSGGSFSNDYASDNRGSVGGFGGNDAGFNAASNFATGNTYGSETN 294
            G        G Y +GSGG++SNDYASDNRGSVGGFGGNDAG+NAASNFA+GNT+GSE+N
Sbjct: 181 AG--------GNYGRGSGGNYSNDYASDNRGSVGGFGGNDAGYNAASNFASGNTFGSESN 240

Query: 295 AGFGSGSGVGGY----TGGEQFGSNETNTMNASGEEQFKGNARDEDDADDFAKRA 343
           AGFGSGSG G Y    +G  QFGSNETN+MNASGEEQF+ NARD DD DDFAKRA
Sbjct: 241 AGFGSGSG-GDYFANGSGEGQFGSNETNSMNASGEEQFEENARDGDDTDDFAKRA 285

[Close]

BLAST of PI0019451 vs. NCBI nr
Match: XP_038878732.1 (glycine-rich RNA-binding protein 3, mitochondrial-like [Benincasa hispida])

HSP 1 Score: 364.4 bits (934), Expect = 1.1e-96
Identity = 246/325 (75.69%), Postives = 264/325 (81.23%), Query Frame = 0


Query: 55  MAFLSKFGNILRQGANKRIGLDLQRSSLSICQAVRWMSSMESSKLFVGGISFGTDDQSLR 114
           MAFL KFGNILRQGANKRIGLDLQ SSLSICQAVRWMSSM+SSKLFVGGIS+ TDDQSLR
Sbjct: 1   MAFLGKFGNILRQGANKRIGLDLQASSLSICQAVRWMSSMQSSKLFVGGISYNTDDQSLR 60

Query: 115 EAFTKYGEVVEARVIVDRETGRSRGFGFVTYTSSEEASSAIQALDGQDLHGRRVRVNYAN 174
           EAF KYGEV+EAR+IVDRETGRSRGFGFVT+TSSEEASSAIQALDGQDLHGRRVRVNYAN
Sbjct: 61  EAFAKYGEVLEARIIVDRETGRSRGFGFVTFTSSEEASSAIQALDGQDLHGRRVRVNYAN 120

Query: 175 DKPRSFGGGGSYGGG-YGGGGSYGGGSGYG-------GGGGYGGGGGYGGGGSGGYGGGG 234
           D+ R FGGGG YGGG YGGGG   GG GYG       GGGGYGGGGGY GGG+GGYGGGG
Sbjct: 121 DRTRGFGGGGGYGGGSYGGGGGGYGGGGYGGGGGDGYGGGGYGGGGGYSGGGAGGYGGGG 180

Query: 235 A-GGYGDGSGGYSG----MAGGYSQGSGGSFSNDYASDNRGSV----GGFGGNDAGFNAA 294
           + GGYGDGSGGYSG      G YS+GSGG++SND ASDN GSV    GGFGGNDAG+NAA
Sbjct: 181 SGGGYGDGSGGYSGTGYSSGGNYSRGSGGNYSNDNASDNLGSVGTGGGGFGGNDAGYNAA 240

Query: 295 SNFATGNTYGSETNAGFG----------------SGSGVGGYTGGEQFGSNETNTMNASG 343
           SNFA+GNT+ S TNAGFG                + SGVGGYTGGEQFGS ETNTM+ASG
Sbjct: 241 SNFASGNTHDSGTNAGFGNVSGGGSDYFANSGFDASSGVGGYTGGEQFGS-ETNTMDASG 300

[Close]

BLAST of PI0019451 vs. NCBI nr
Match: XP_022933621.1 (glycine-rich RNA-binding protein 2, mitochondrial-like [Cucurbita moschata] >XP_022933622.1 glycine-rich RNA-binding protein 2, mitochondrial-like [Cucurbita moschata])

HSP 1 Score: 334.0 bits (855), Expect = 1.6e-87
Identity = 231/315 (73.33%), Postives = 249/315 (79.05%), Query Frame = 0


Query: 55  MAFLSKFGNILRQGANKRIGLDLQRSSLSICQAVRWMSSMESSKLFVGGISFGTDDQSLR 114
           MAFLSK GNILRQGANKRIG DLQ  SLSICQAVRWMSSM+SSKLFVGGISF TDDQSLR
Sbjct: 1   MAFLSKVGNILRQGANKRIGSDLQAPSLSICQAVRWMSSMQSSKLFVGGISFSTDDQSLR 60

Query: 115 EAFTKYGEVVEARVIVDRETGRSRGFGFVTYTSSEEASSAIQALDGQDLHGRRVRVNYAN 174
           EAFTKYGEVVEAR+IVDRETGRSRGFGFVTYTSSEEASSAIQALDGQDLHGRRVRVNYAN
Sbjct: 61  EAFTKYGEVVEARIIVDRETGRSRGFGFVTYTSSEEASSAIQALDGQDLHGRRVRVNYAN 120

Query: 175 DKPRSFGGGGSYGGGYGGGGSYGGGSGYGGGGGYGGGGGYGGGGSGGYGGGGAGGYGDGS 234
           D+ R  G     GGGYGGGG YGGG GYGGGGGYGGGGGYG GG+GGYGGGG+GGYGDGS
Sbjct: 121 DRSRGVG-----GGGYGGGGGYGGG-GYGGGGGYGGGGGYGDGGAGGYGGGGSGGYGDGS 180

Query: 235 GG-----------YSGMAGGYSQGSGGSFSNDYASDNRGSV---GGFGGNDAGFNAASNF 294
           GG           YS   GG SQGSGG++ N++ASD+RGSV   GGFGGNDAG+N ASNF
Sbjct: 181 GGFSTTGYSSGGNYSNNFGGGSQGSGGNYGNEFASDSRGSVSTGGGFGGNDAGYN-ASNF 240

Query: 295 ATGNTYGSETNAGFG---------SGSGVGGYTGGEQFGSNETNTMNASGE---EQFKGN 343
           + G++     + G G           SG GGYTGG+QF S ET+TMNA G    EQ +GN
Sbjct: 241 SGGDSGNYNVSGGGGDYFSNRGSEESSGFGGYTGGDQFSSKETDTMNAPGSGLGEQLEGN 300

[Close]

BLAST of PI0019451 vs. NCBI nr
Match: XP_022971767.1 (glycine-rich RNA-binding protein 3, mitochondrial-like isoform X1 [Cucurbita maxima] >XP_022971776.1 glycine-rich RNA-binding protein 3, mitochondrial-like isoform X1 [Cucurbita maxima] >XP_022971783.1 glycine-rich RNA-binding protein 3, mitochondrial-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 329.7 bits (844), Expect = 3.0e-86
Identity = 228/319 (71.47%), Postives = 250/319 (78.37%), Query Frame = 0


Query: 55  MAFLSKFGNILRQGANKRIGLDLQRSSLSICQAVRWMSSMESSKLFVGGISFGTDDQSLR 114
           MAFLSK GNILRQGANK+IG DLQ SSLSICQAVRWMSSM+SSKLFVGGISF TDDQSLR
Sbjct: 1   MAFLSKVGNILRQGANKKIGSDLQASSLSICQAVRWMSSMQSSKLFVGGISFSTDDQSLR 60

Query: 115 EAFTKYGEVVEARVIVDRETGRSRGFGFVTYTSSEEASSAIQALDGQDLHGRRVRVNYAN 174
           EAFTKYGEVVEAR+IVDRETGRSRGFGFVTYTSSEEASSAIQALDGQDLHGRRVRVNYAN
Sbjct: 61  EAFTKYGEVVEARIIVDRETGRSRGFGFVTYTSSEEASSAIQALDGQDLHGRRVRVNYAN 120

Query: 175 DKPRSFGGGGSYGGGYGGGGSYGGGSGYGGGGGYG----GGGGYGGGGSGGYGGGGAGGY 234
           D+ R  G     GGGYGGGG YGGG GYGGGGGYG    GGGGYGGGG GGYGGGG+GGY
Sbjct: 121 DRSRGVG-----GGGYGGGGGYGGGGGYGGGGGYGGGGYGGGGYGGGGPGGYGGGGSGGY 180

Query: 235 GDGSGG-----------YSGMAGGYSQGSGGSFSNDYASDNRGSV---GGFGGNDAGFNA 294
           GDGSGG           Y+   GG SQG+GG++ N++ASD+RGSV   GGFGGNDAG+N 
Sbjct: 181 GDGSGGFSTTGYSSGGNYTNNFGGGSQGTGGNYGNEFASDSRGSVSTGGGFGGNDAGYN- 240

Query: 295 ASNFATGNTYGSETNAGFG---------SGSGVGGYTGGEQFGSNETNTMNASGE---EQ 343
           ASNF+ G++     + G G           SG GGYTGG+QF S ET++MNA G    EQ
Sbjct: 241 ASNFSGGDSGNYNVSGGGGDYFSNRGSEESSGFGGYTGGDQFSSKETDSMNAPGSGLGEQ 300

[Close]

BLAST of PI0019451 vs. TAIR 10
Match: AT5G61030.1 (glycine-rich RNA-binding protein 3 )

HSP 1 Score: 194.1 bits (492), Expect = 1.8e-49
Identity = 172/317 (54.26%), Postives = 204/317 (64.35%), Query Frame = 0


Query: 55  MAFLSKFGNILRQGANKRIGLDLQRSSLSICQAVRWMSSMESSKLFVGGISFGTDDQSLR 114
           MAFLSKFGNIL+Q  NK++   +  SS S+ QA+R MS   SSKLF+GG+++  D+ SLR
Sbjct: 1   MAFLSKFGNILKQTTNKQLNAQVSLSSPSLFQAIRCMS---SSKLFIGGMAYSMDEDSLR 60

Query: 115 EAFTKYGEVVEARVIVDRETGRSRGFGFVTYTSSEEASSAIQALDGQDLHGRRVRVNYAN 174
           EAFTKYGEVV+ RVI+DRETGRSRGFGFVT+TSSE ASSAIQALDG+DLHGR V+VNYAN
Sbjct: 61  EAFTKYGEVVDTRVILDRETGRSRGFGFVTFTSSEAASSAIQALDGRDLHGRVVKVNYAN 120

Query: 175 DKPRSFG-GGGSY---GGGYGGGGSYGGGS-GYGGGGGYGG---------GGGYGGGGSG 234
           D+    G GGG Y   GGGYGG G YGGG+ GYGG GGYGG         GGGYGG  +G
Sbjct: 121 DRTSGGGFGGGGYGGGGGGYGGSGGYGGGAGGYGGSGGYGGGAGGYGGNSGGGYGGNAAG 180

Query: 235 GYGGGGAGGYGDGSGGYSGMAGGY-SQGSGGSFSNDYASDNRGSVGGFGGNDAGFNAASN 294
           GYGG GAGGYG  + G+ G  GGY S G  GS  N Y   +  S G  G     +N +S 
Sbjct: 181 GYGGSGAGGYGGDATGHGGAGGGYGSSGGFGSSGNTYGEGSSASAGAVG----DYNGSSG 240

Query: 295 FATGNTYGSETNAGFGSGSGVGGYTGG--EQFGSNETNTM---NASGEEQF----KGNAR 343
           + + NTYGS +N GF   S  GG   G   QFG + T         GE+QF    K   +
Sbjct: 241 YGSANTYGS-SNGGFAGDSQFGGSPVGNSSQFGGDNTQFTAGGQFGGEDQFGSMEKSETK 300

[Close]

BLAST of PI0019451 vs. TAIR 10
Match: AT1G74230.1 (glycine-rich RNA-binding protein 5 )

HSP 1 Score: 127.5 bits (319), Expect = 2.1e-29
Identity = 153/315 (48.57%), Postives = 183/315 (58.10%), Query Frame = 0


Query: 55  MAFLSKFGNILRQGANKRIGLDLQRSSLSICQAVRWMSSMESSKLFVGGISFGTDDQSLR 114
           MAFLSK G +  Q ++         +S S+ Q++R MS   SSK+FVGGIS+ TD+  LR
Sbjct: 1   MAFLSKVGRLFSQTSSH------VTASSSMLQSIRCMS---SSKIFVGGISYSTDEFGLR 60

Query: 115 EAFTKYGEVVEARVIVDRETGRSRGFGFVTYTSSEEASSAIQALDGQDLHGRRVRVNYAN 174
           EAF+KYGEVV+A++IVDRETGRSRGF FVT+TS+EEAS+A+Q LDGQDLHGRR+RVNYA 
Sbjct: 61  EAFSKYGEVVDAKIIVDRETGRSRGFAFVTFTSTEEASNAMQ-LDGQDLHGRRIRVNYAT 120

Query: 175 DKPRSFGG------GGSYGGGYGGGGSYGGGSGYGGGGGYGGGGGYGG--GGSGGYG--- 234
           ++   FGG      GG YG   GG G+  GG G GG GGYGG   Y G  GG GGYG   
Sbjct: 121 ERGSGFGGRGFGGPGGGYGASDGGYGAPAGGYG-GGAGGYGGNSSYSGNAGGGGGYGGNS 180

Query: 235 --GGGAGGYGDGSGGYSGMAGGYSQGSGGSFSNDYASDNRGSVGGFGGNDAGFNAASNFA 294
             GG AGGYG G+  YSG A G   G GG  SN       G  GG GG++       NFA
Sbjct: 181 SYGGNAGGYG-GNPPYSGNAVG---GGGGYGSNFGGGGGYGVAGGVGGSE-------NFA 240

Query: 295 TGNTYGSETNAGFG----SGSGVG---------GYTGGEQFGSNETNTMNASGEEQFKGN 343
                GS TNAGF     S   +G         G  G EQFG ++    +A       G 
Sbjct: 241 ----QGSSTNAGFDDKFESNQPLGNDTDHQTESGLGGDEQFGGSDNQFGDAENGNTENGP 289

[Close]

BLAST of PI0019451 vs. TAIR 10
Match: AT4G13850.2 (glycine-rich RNA-binding protein 2 )

HSP 1 Score: 126.7 bits (317), Expect = 3.5e-29
Identity = 85/160 (53.12%), Postives = 113/160 (70.62%), Query Frame = 0


Query: 55  MAFLSKFGNILRQGANKRIGLDLQRSSLSICQAVRWMSSMESSKLFVGGISFGTDDQSLR 114
           MAF +K G +LRQ  +    + +     S+  ++R M    S+KLF+GG+S+GTDD SLR
Sbjct: 1   MAFCNKLGGLLRQNISSNGNVPV----TSMLGSLRLM----STKLFIGGLSWGTDDASLR 60

Query: 115 EAFTKYGEVVEARVIVDRETGRSRGFGFVTYTSSEEASSAIQALDGQDLHGRRVRVNYAN 174
           +AF  +G+VV+A+VIVDRETGRSRGFGFV +     A++AI  +DG++L+GR +RVN AN
Sbjct: 61  DAFAHFGDVVDAKVIVDRETGRSRGFGFVNFNDEGAATAAISEMDGKELNGRHIRVNPAN 120

Query: 175 DK---PRSFGGGGSYGGGYGGGGSYGGGSGYGGGGGYGGG 212
           D+   PR++GGGG Y  G GGGG  GGG GYGGGG  GGG
Sbjct: 121 DRPSAPRAYGGGGGYSYGGGGGGYGGGGGGYGGGGDGGGG 152

[Close]

BLAST of PI0019451 vs. TAIR 10
Match: AT4G13850.1 (glycine-rich RNA-binding protein 2 )

HSP 1 Score: 125.2 bits (313), Expect = 1.0e-28
Identity = 91/167 (54.49%), Postives = 119/167 (71.26%), Query Frame = 0


Query: 55  MAFLSKFGNILRQGANKRIGLDLQRSSLSICQAVRWMSSMESSKLFVGGISFGTDDQSLR 114
           MAF +K G +LRQ  +    + +     S+  ++R M    S+KLF+GG+S+GTDD SLR
Sbjct: 1   MAFCNKLGGLLRQNISSNGNVPV----TSMLGSLRLM----STKLFIGGLSWGTDDASLR 60

Query: 115 EAFTKYGEVVEARVIVDRETGRSRGFGFVTYTSSEEASSAIQALDGQDLHGRRVRVNYAN 174
           +AF  +G+VV+A+VIVDRETGRSRGFGFV +     A++AI  +DG++L+GR +RVN AN
Sbjct: 61  DAFAHFGDVVDAKVIVDRETGRSRGFGFVNFNDEGAATAAISEMDGKELNGRHIRVNPAN 120

Query: 175 DK---PRSFGGGGSYGGGYGGGGSYGGGSGYGGGGGYGGGGGYGGGG 219
           D+   PR++GGGG Y G  GGGG  GGG GYGGGGG  GGGG GGGG
Sbjct: 121 DRPSAPRAYGGGGGYSG--GGGGYGGGGGGYGGGGGGYGGGGDGGGG 157

[Close]

BLAST of PI0019451 vs. TAIR 10
Match: AT2G21660.2 (cold, circadian rhythm, and rna binding 2 )

HSP 1 Score: 86.7 bits (213), Expect = 4.1e-17
Identity = 85/154 (55.19%), Postives = 106/154 (68.83%), Query Frame = 0


Query: 98  KLFVGGISFGTDDQSLREAFTKYGEVVEARVIVDRETGRSRGFGFVTYTSSEEASSAIQA 157
           + FVGG+++ TDD++L  AF +YG+V+++++I DRETGRSRGFGFVT+   +    AI+ 
Sbjct: 9   RCFVGGLAWATDDRALETAFAQYGDVIDSKIINDRETGRSRGFGFVTFKDEKAMKDAIEG 68

Query: 158 LDGQDLHGRRVRVNYANDKPRSFGGGGSYGGGYGGGGSYGGGSG--YGGGGGYGGGGGYG 217
           ++GQDL GR + VN A    +S G GG  GGG+ GGGSYGGG G   GGGG  GGGGGY 
Sbjct: 69  MNGQDLDGRSITVNEA----QSRGSGG--GGGHRGGGSYGGGGGRREGGGGYSGGGGGYS 128

Query: 218 --GGGSGGYGGG---GAGGYGDG-SGGYSGMAGG 244
             GGG G YGGG   G GGYG G  GGY G  GG
Sbjct: 129 SRGGGGGSYGGGRREGGGGYGGGEGGGYGGSGGG 156

The following BLAST results are available for this feature:

BLAST of PI0019451 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FNR1	2.5e-48	54.26	Glycine-rich RNA-binding protein 3, mitochondrial OS=Arabidopsis thaliana OX=370...	[more]
Q9C909	2.9e-28	48.57	Glycine-rich RNA-binding protein 5, mitochondrial OS=Arabidopsis thaliana OX=370...	[more]
Q9SVM8	1.5e-27	54.49	Glycine-rich RNA-binding protein 2, mitochondrial OS=Arabidopsis thaliana OX=370...	[more]
Q43472	3.5e-21	57.24	Glycine-rich RNA-binding protein blt801 OS=Hordeum vulgare OX=4513 GN=blt801 PE=...	[more]
P10979	1.2e-18	56.38	Glycine-rich RNA-binding, abscisic acid-inducible protein OS=Zea mays OX=4577 GN...	[more]

BLAST of PI0019451 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UWK3	6.6e-100	82.03	Glycine-rich RNA-binding protein 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C...	[more]
A0A1S3BVW4	6.6e-100	82.03	glycine-rich RNA-binding protein 2, mitochondrial-like OS=Cucumis melo OX=3656 G...	[more]
A0A0A0LPA9	2.5e-99	83.39	RRM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G013770 PE=4 SV...	[more]
A0A6J1EZK6	7.6e-88	73.33	glycine-rich RNA-binding protein 2, mitochondrial-like OS=Cucurbita moschata OX=...	[more]
A0A6J1I7Z2	1.4e-86	71.47	glycine-rich RNA-binding protein 3, mitochondrial-like isoform X1 OS=Cucurbita m...	[more]

BLAST of PI0019451 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011648448.2	4.3e-101	83.79	glycine-rich RNA-binding protein blt801 [Cucumis sativus] >KAE8652435.1 hypothet...	[more]
XP_008453280.1	1.4e-99	82.03	PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like [Cucumis melo]...	[more]
XP_038878732.1	1.1e-96	75.69	glycine-rich RNA-binding protein 3, mitochondrial-like [Benincasa hispida]	[more]
XP_022933621.1	1.6e-87	73.33	glycine-rich RNA-binding protein 2, mitochondrial-like [Cucurbita moschata] >XP_...	[more]
XP_022971767.1	3.0e-86	71.47	glycine-rich RNA-binding protein 3, mitochondrial-like isoform X1 [Cucurbita max...	[more]

BLAST of PI0019451 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G61030.1	1.8e-49	54.26	glycine-rich RNA-binding protein 3	[more]
AT1G74230.1	2.1e-29	48.57	glycine-rich RNA-binding protein 5	[more]
AT4G13850.2	3.5e-29	53.13	glycine-rich RNA-binding protein 2	[more]
AT4G13850.1	1.0e-28	54.49	glycine-rich RNA-binding protein 2	[more]
AT2G21660.2	4.1e-17	55.19	cold, circadian rhythm, and rna binding 2	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 98..171 e-value: 2.5E-30 score: 116.7
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 99..169 e-value: 2.9E-22 score: 78.3
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 97..175 score: 22.162525
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 78..194 e-value: 6.8E-33 score: 115.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 325..342
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 287..342
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 305..323
None	No IPR available	PANTHER	PTHR48027	HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN 87F-RELATED	coord: 55..214
None	No IPR available	PANTHER	PTHR48027:SF9	GLYCINE-RICH RNA-BINDING PROTEIN 3, MITOCHONDRIAL	coord: 55..214
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 94..207

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0019451.1	PI0019451.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003676	nucleic acid binding