PI0019409 (gene) Melon (PI 482460) v1

Overview


Name	PI0019409
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	Serine/threonine-protein phosphatase 7 long form-like protein isoform X1
Location	chr09: 15886479 .. 15886655 (-)
RNA-Seq Expression	PI0019409
Synteny	PI0019409

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAACACAACTTACAAGCTTTGAACTCAATGTGTGATCAAACATTGGGAACCGTAGAACAAATTATTCAGCAGACTAGACGACTCAATGTTGCCGACACAGATCGAAAACGCGTTCGATGTAGACGACGACGACAAGGCGATGATGTCGTAGAGGGAGACCAAGATAATGCTTAG

mRNA sequence

ATGGAACACAACTTACAAGCTTTGAACTCAATGTGTGATCAAACATTGGGAACCGTAGAACAAATTATTCAGCAGACTAGACGACTCAATGTTGCCGACACAGATCGAAAACGCGTTCGATGTAGACGACGACGACAAGGCGATGATGTCGTAGAGGGAGACCAAGATAATGCTTAG

Coding sequence (CDS)

ATGGAACACAACTTACAAGCTTTGAACTCAATGTGTGATCAAACATTGGGAACCGTAGAACAAATTATTCAGCAGACTAGACGACTCAATGTTGCCGACACAGATCGAAAACGCGTTCGATGTAGACGACGACGACAAGGCGATGATGTCGTAGAGGGAGACCAAGATAATGCTTAG

Protein sequence

MEHNLQALNSMCDQTLGTVEQIIQQTRRLNVADTDRKRVRCRRRRQGDDVVEGDQDNA

Homology

[Close]

BLAST of PI0019409 vs. ExPASy TrEMBL
Match: A0A5A7TPE7 (Serine/threonine-protein phosphatase 7 long form-like protein isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold236G003010 PE=4 SV=1)

HSP 1 Score: 80.5 bits (197), Expect = 2.6e-12
Identity = 39/57 (68.42%), Postives = 49/57 (85.96%), Query Frame = 0


Query: 1   MEHNLQALNSMCDQTLGTVEQIIQQTRRLNVADTDRKRVRCRRRRQGDDVVEGDQDN 58
           +EHN++AL  +CD+T   V+ IIQ+TRRL VADTDR+R+R RRRRQGDDVVEGD+DN
Sbjct: 229 VEHNIEALGQICDRTTERVDHIIQKTRRLTVADTDRRRMRRRRRRQGDDVVEGDEDN 285

[Close]

BLAST of PI0019409 vs. ExPASy TrEMBL
Match: A0A5A7TSW1 (Serine/threonine-protein phosphatase 7 long form-like protein isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold201G00240 PE=4 SV=1)

HSP 1 Score: 80.1 bits (196), Expect = 3.4e-12
Identity = 39/57 (68.42%), Postives = 49/57 (85.96%), Query Frame = 0


Query: 1   MEHNLQALNSMCDQTLGTVEQIIQQTRRLNVADTDRKRVRCRRRRQGDDVVEGDQDN 58
           +EH+++AL  +CD+T   V+ IIQQTRRL VADTDR+R+R RRRRQGDDVVEGD+DN
Sbjct: 441 VEHDIEALGQICDRTTERVDHIIQQTRRLTVADTDRRRMRRRRRRQGDDVVEGDEDN 497

[Close]

BLAST of PI0019409 vs. ExPASy TrEMBL
Match: A0A5D3BUF5 (Serine/threonine-protein phosphatase 7 long form-like protein isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold298G001440 PE=4 SV=1)

HSP 1 Score: 80.1 bits (196), Expect = 3.4e-12
Identity = 39/57 (68.42%), Postives = 49/57 (85.96%), Query Frame = 0


Query: 1   MEHNLQALNSMCDQTLGTVEQIIQQTRRLNVADTDRKRVRCRRRRQGDDVVEGDQDN 58
           +EH+++AL  +CD+T   V+ IIQQTRRL VADTDR+R+R RRRRQGDDVVEGD+DN
Sbjct: 523 VEHDIEALGQICDRTTERVDHIIQQTRRLTVADTDRRRMRRRRRRQGDDVVEGDEDN 579

[Close]

BLAST of PI0019409 vs. ExPASy TrEMBL
Match: A0A5A7TI34 (Serine/threonine-protein phosphatase 7 long form-like protein isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold75G00540 PE=4 SV=1)

HSP 1 Score: 80.1 bits (196), Expect = 3.4e-12
Identity = 39/57 (68.42%), Postives = 49/57 (85.96%), Query Frame = 0


Query: 1   MEHNLQALNSMCDQTLGTVEQIIQQTRRLNVADTDRKRVRCRRRRQGDDVVEGDQDN 58
           +EH+++AL  +CD+T   V+ IIQQTRRL VADTDR+R+R RRRRQGDDVVEGD+DN
Sbjct: 876 VEHDIEALGQICDRTTERVDHIIQQTRRLTVADTDRRRMRRRRRRQGDDVVEGDEDN 932

[Close]

BLAST of PI0019409 vs. ExPASy TrEMBL
Match: A0A5D3BQW5 (Serine/threonine-protein phosphatase 7 long form-like protein isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold29G00920 PE=4 SV=1)

HSP 1 Score: 80.1 bits (196), Expect = 3.4e-12
Identity = 39/57 (68.42%), Postives = 49/57 (85.96%), Query Frame = 0


Query: 1   MEHNLQALNSMCDQTLGTVEQIIQQTRRLNVADTDRKRVRCRRRRQGDDVVEGDQDN 58
           +EH+++AL  +CD+T   V+ IIQQTRRL VADTDR+R+R RRRRQGDDVVEGD+DN
Sbjct: 390 VEHDIEALGQICDRTTERVDHIIQQTRRLTVADTDRRRMRRRRRRQGDDVVEGDEDN 446

[Close]

BLAST of PI0019409 vs. NCBI nr
Match: KAA0043956.1 (serine/threonine-protein phosphatase 7 long form-like protein isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 80.5 bits (197), Expect = 5.3e-12
Identity = 39/57 (68.42%), Postives = 49/57 (85.96%), Query Frame = 0


Query: 1   MEHNLQALNSMCDQTLGTVEQIIQQTRRLNVADTDRKRVRCRRRRQGDDVVEGDQDN 58
           +EHN++AL  +CD+T   V+ IIQ+TRRL VADTDR+R+R RRRRQGDDVVEGD+DN
Sbjct: 229 VEHNIEALGQICDRTTERVDHIIQKTRRLTVADTDRRRMRRRRRRQGDDVVEGDEDN 285

[Close]

BLAST of PI0019409 vs. NCBI nr
Match: TYK03303.1 (serine/threonine-protein phosphatase 7 long form-like protein isoform X1 [Cucumis melo var. makuwa] >TYK12342.1 serine/threonine-protein phosphatase 7 long form-like protein isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 80.1 bits (196), Expect = 6.9e-12
Identity = 39/57 (68.42%), Postives = 49/57 (85.96%), Query Frame = 0


Query: 1   MEHNLQALNSMCDQTLGTVEQIIQQTRRLNVADTDRKRVRCRRRRQGDDVVEGDQDN 58
           +EH+++AL  +CD+T   V+ IIQQTRRL VADTDR+R+R RRRRQGDDVVEGD+DN
Sbjct: 523 VEHDIEALGQICDRTTERVDHIIQQTRRLTVADTDRRRMRRRRRRQGDDVVEGDEDN 579

[Close]

BLAST of PI0019409 vs. NCBI nr
Match: KAA0042980.1 (serine/threonine-protein phosphatase 7 long form-like protein isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 80.1 bits (196), Expect = 6.9e-12
Identity = 39/57 (68.42%), Postives = 49/57 (85.96%), Query Frame = 0


Query: 1   MEHNLQALNSMCDQTLGTVEQIIQQTRRLNVADTDRKRVRCRRRRQGDDVVEGDQDN 58
           +EH+++AL  +CD+T   V+ IIQQTRRL VADTDR+R+R RRRRQGDDVVEGD+DN
Sbjct: 876 VEHDIEALGQICDRTTERVDHIIQQTRRLTVADTDRRRMRRRRRRQGDDVVEGDEDN 932

[Close]

BLAST of PI0019409 vs. NCBI nr
Match: TYK16735.1 (serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 80.1 bits (196), Expect = 6.9e-12
Identity = 39/57 (68.42%), Postives = 49/57 (85.96%), Query Frame = 0


Query: 1   MEHNLQALNSMCDQTLGTVEQIIQQTRRLNVADTDRKRVRCRRRRQGDDVVEGDQDN 58
           +EH+++AL  +CD+T   V+ IIQQTRRL VADTDR+R+R RRRRQGDDVVEGD+DN
Sbjct: 135 VEHDIEALGQICDRTTERVDHIIQQTRRLTVADTDRRRMRRRRRRQGDDVVEGDEDN 191

[Close]

BLAST of PI0019409 vs. NCBI nr
Match: KAA0051993.1 (serine/threonine-protein phosphatase 7 long form-like protein isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 80.1 bits (196), Expect = 6.9e-12
Identity = 39/57 (68.42%), Postives = 49/57 (85.96%), Query Frame = 0


Query: 1   MEHNLQALNSMCDQTLGTVEQIIQQTRRLNVADTDRKRVRCRRRRQGDDVVEGDQDN 58
           +EH+++AL  +CD+T   V+ IIQQTRRL VADTDR+R+R RRRRQGDDVVEGD+DN
Sbjct: 484 VEHDIEALGQICDRTTERVDHIIQQTRRLTVADTDRRRMRRRRRRQGDDVVEGDEDN 540

The following BLAST results are available for this feature:

BLAST of PI0019409 vs.


Match Name	E-value	Identity	Description

BLAST of PI0019409 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TPE7	2.6e-12	68.42	Serine/threonine-protein phosphatase 7 long form-like protein isoform X1 OS=Cucu...	[more]
A0A5A7TSW1	3.4e-12	68.42	Serine/threonine-protein phosphatase 7 long form-like protein isoform X1 OS=Cucu...	[more]
A0A5D3BUF5	3.4e-12	68.42	Serine/threonine-protein phosphatase 7 long form-like protein isoform X1 OS=Cucu...	[more]
A0A5A7TI34	3.4e-12	68.42	Serine/threonine-protein phosphatase 7 long form-like protein isoform X1 OS=Cucu...	[more]
A0A5D3BQW5	3.4e-12	68.42	Serine/threonine-protein phosphatase 7 long form-like protein isoform X1 OS=Cucu...	[more]

BLAST of PI0019409 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0043956.1	5.3e-12	68.42	serine/threonine-protein phosphatase 7 long form-like protein isoform X1 [Cucumi...	[more]
TYK03303.1	6.9e-12	68.42	serine/threonine-protein phosphatase 7 long form-like protein isoform X1 [Cucumi...	[more]
KAA0042980.1	6.9e-12	68.42	serine/threonine-protein phosphatase 7 long form-like protein isoform X1 [Cucumi...	[more]
TYK16735.1	6.9e-12	68.42	serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var....	[more]
KAA0051993.1	6.9e-12	68.42	serine/threonine-protein phosphatase 7 long form-like protein isoform X1 [Cucumi...	[more]

BLAST of PI0019409 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 38..52
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 38..58

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0019409.1	PI0019409.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010073	meristem maintenance
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity