PI0019403 (gene) Melon (PI 482460) v1

Overview


Name	PI0019403
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	Serine/threonine-protein phosphatase 7 long form-like protein isoform X1
Location	chr06: 14754172 .. 14754366 (+)
RNA-Seq Expression	PI0019403
Synteny	PI0019403

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACTGCTACTTATTGTCCAACTACAAGCGTTGTTATGACGGTCGCTTCCATCCGATACAACATCCAGACTACTGGTCAGAGTTATCATTCACTGAAGTTCGCCCAAATGCGAACTTACTTAGAGAACCCGGTCGACCCAGAACTACGAGGATCCATAATGAAATGGATTGGAAGGAGTCTGGTCAATCAGTAA

mRNA sequence

ATGACTGCTACTTATTGTCCAACTACAAGCGTTGTTATGACGGTCGCTTCCATCCGATACAACATCCAGACTACTGGTCAGAGTTATCATTCACTGAAGTTCGCCCAAATGCGAACTTACTTAGAGAACCCGGTCGACCCAGAACTACGAGGATCCATAATGAAATGGATTGGAAGGAGTCTGGTCAATCAGTAA

Coding sequence (CDS)

ATGACTGCTACTTATTGTCCAACTACAAGCGTTGTTATGACGGTCGCTTCCATCCGATACAACATCCAGACTACTGGTCAGAGTTATCATTCACTGAAGTTCGCCCAAATGCGAACTTACTTAGAGAACCCGGTCGACCCAGAACTACGAGGATCCATAATGAAATGGATTGGAAGGAGTCTGGTCAATCAGTAA

Protein sequence

MTATYCPTTSVVMTVASIRYNIQTTGQSYHSLKFAQMRTYLENPVDPELRGSIMKWIGRSLVNQ

Homology

[Close]

BLAST of PI0019403 vs. ExPASy TrEMBL
Match: A0A0A0KPT2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G582750 PE=4 SV=1)

HSP 1 Score: 90.1 bits (222), Expect = 3.6e-15
Identity = 45/64 (70.31%), Postives = 52/64 (81.25%), Query Frame = 0


Query: 1  MTATYCPTTSVVMTVASIRYNIQTTGQSYHSLKFAQMRTYLENPVDPELRGSIMKWIGRS 60
          M AT C  ++VVMTVASI+ N Q  GQ YHSLKFA M+TYL+NPVD EL+GS MKWIG+S
Sbjct: 1  MNATCCRHSNVVMTVASIQSNTQIIGQRYHSLKFAPMQTYLKNPVDQELQGSKMKWIGKS 60

Query: 61 LVNQ 65
          LVNQ
Sbjct: 61 LVNQ 64

[Close]

BLAST of PI0019403 vs. ExPASy TrEMBL
Match: A0A5A7T0Q1 (Serine/threonine-protein phosphatase 7 long form-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold57G002710 PE=4 SV=1)

HSP 1 Score: 82.4 bits (202), Expect = 7.5e-13
Identity = 42/63 (66.67%), Postives = 49/63 (77.78%), Query Frame = 0


Query: 1   MTATYCPTTSVVMTVASIRYNIQTTGQSYHSLKFAQMRTYLENPVDPELRGSIMKWIGRS 60
           M AT C T + VM+V  I+ N QT G SYHSLKFAQMRTYL++ +D EL GSIMKWIG+S
Sbjct: 52  MNATCCQTLNDVMSVDYIQSNTQTIGLSYHSLKFAQMRTYLKDLIDQELPGSIMKWIGKS 111

Query: 61  LVN 64
           LVN
Sbjct: 112 LVN 114

[Close]

BLAST of PI0019403 vs. ExPASy TrEMBL
Match: A0A0A0KNE8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G449150 PE=4 SV=1)

HSP 1 Score: 80.1 bits (196), Expect = 3.7e-12
Identity = 39/52 (75.00%), Postives = 43/52 (82.69%), Query Frame = 0


Query: 13 MTVASIRYNIQTTGQSYHSLKFAQMRTYLENPVDPELRGSIMKWIGRSLVNQ 65
          MTVASI+ N Q  GQ YHSLKFA MRTYL++PVD EL GS MKWIG+SLVNQ
Sbjct: 1  MTVASIQSNTQIIGQRYHSLKFAPMRTYLKDPVDQELLGSKMKWIGKSLVNQ 52

[Close]

BLAST of PI0019403 vs. ExPASy TrEMBL
Match: A0A5A7U7U0 (Serine/threonine-protein phosphatase 7 long form-like protein isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold60G004770 PE=4 SV=1)

HSP 1 Score: 79.0 bits (193), Expect = 8.2e-12
Identity = 41/63 (65.08%), Postives = 49/63 (77.78%), Query Frame = 0


Query: 1  MTATYCPTTSVVMTVASIRYNIQTTGQSYHSLKFAQMRTYLENPVDPELRGSIMKWIGRS 60
          M AT C T++ VM V SI+ NIQ  G S HS KFAQM+TYL++PVD E +GSIMKWIG+S
Sbjct: 17 MNATCCRTSNNVMPVDSIQSNIQIIGLSCHSPKFAQMQTYLKDPVDREQQGSIMKWIGKS 76

Query: 61 LVN 64
          LVN
Sbjct: 77 LVN 79

[Close]

BLAST of PI0019403 vs. ExPASy TrEMBL
Match: A0A5A7TI34 (Serine/threonine-protein phosphatase 7 long form-like protein isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold75G00540 PE=4 SV=1)

HSP 1 Score: 77.0 bits (188), Expect = 3.1e-11
Identity = 40/63 (63.49%), Postives = 48/63 (76.19%), Query Frame = 0


Query: 1   MTATYCPTTSVVMTVASIRYNIQTTGQSYHSLKFAQMRTYLENPVDPELRGSIMKWIGRS 60
           M AT C T++ VM V SI+ N Q  G S HS KFAQM+TYL++PVD E +GSIMKWIG+S
Sbjct: 342 MNATCCRTSNNVMPVDSIQSNTQIIGLSCHSPKFAQMQTYLKDPVDREQQGSIMKWIGKS 401

Query: 61  LVN 64
           LVN
Sbjct: 402 LVN 404

[Close]

BLAST of PI0019403 vs. NCBI nr
Match: KAA0035171.1 (serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 82.4 bits (202), Expect = 1.5e-12
Identity = 42/63 (66.67%), Postives = 49/63 (77.78%), Query Frame = 0


Query: 1   MTATYCPTTSVVMTVASIRYNIQTTGQSYHSLKFAQMRTYLENPVDPELRGSIMKWIGRS 60
           M AT C T + VM+V  I+ N QT G SYHSLKFAQMRTYL++ +D EL GSIMKWIG+S
Sbjct: 52  MNATCCQTLNDVMSVDYIQSNTQTIGLSYHSLKFAQMRTYLKDLIDQELPGSIMKWIGKS 111

Query: 61  LVN 64
           LVN
Sbjct: 112 LVN 114

[Close]

BLAST of PI0019403 vs. NCBI nr
Match: KAE8653099.1 (hypothetical protein Csa_020145 [Cucumis sativus])

HSP 1 Score: 80.1 bits (196), Expect = 7.6e-12
Identity = 38/52 (73.08%), Postives = 44/52 (84.62%), Query Frame = 0


Query: 13 MTVASIRYNIQTTGQSYHSLKFAQMRTYLENPVDPELRGSIMKWIGRSLVNQ 65
          MTVASI+ N Q  GQ YHSLKFA M+TYL++PVD EL+GS MKWIG+SLVNQ
Sbjct: 1  MTVASIKSNTQIIGQRYHSLKFAPMQTYLKDPVDQELQGSKMKWIGKSLVNQ 52

[Close]

BLAST of PI0019403 vs. NCBI nr
Match: KAA0051993.1 (serine/threonine-protein phosphatase 7 long form-like protein isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 79.0 bits (193), Expect = 1.7e-11
Identity = 41/63 (65.08%), Postives = 49/63 (77.78%), Query Frame = 0


Query: 1  MTATYCPTTSVVMTVASIRYNIQTTGQSYHSLKFAQMRTYLENPVDPELRGSIMKWIGRS 60
          M AT C T++ VM V SI+ NIQ  G S HS KFAQM+TYL++PVD E +GSIMKWIG+S
Sbjct: 17 MNATCCRTSNNVMPVDSIQSNIQIIGLSCHSPKFAQMQTYLKDPVDREQQGSIMKWIGKS 76

Query: 61 LVN 64
          LVN
Sbjct: 77 LVN 79

[Close]

BLAST of PI0019403 vs. NCBI nr
Match: KAA0042980.1 (serine/threonine-protein phosphatase 7 long form-like protein isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 77.0 bits (188), Expect = 6.5e-11
Identity = 40/63 (63.49%), Postives = 48/63 (76.19%), Query Frame = 0


Query: 1   MTATYCPTTSVVMTVASIRYNIQTTGQSYHSLKFAQMRTYLENPVDPELRGSIMKWIGRS 60
           M AT C T++ VM V SI+ N Q  G S HS KFAQM+TYL++PVD E +GSIMKWIG+S
Sbjct: 342 MNATCCRTSNNVMPVDSIQSNTQIIGLSCHSPKFAQMQTYLKDPVDREQQGSIMKWIGKS 401

Query: 61  LVN 64
           LVN
Sbjct: 402 LVN 404

[Close]

BLAST of PI0019403 vs. NCBI nr
Match: KAA0031833.1 (serine/threonine-protein phosphatase 7 long form-like protein isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 77.0 bits (188), Expect = 6.5e-11
Identity = 40/63 (63.49%), Postives = 48/63 (76.19%), Query Frame = 0


Query: 1   MTATYCPTTSVVMTVASIRYNIQTTGQSYHSLKFAQMRTYLENPVDPELRGSIMKWIGRS 60
           M AT C T++ VM V SI+ N Q  G S HS KFAQM+TYL++PVD E +GSIMKWIG+S
Sbjct: 105 MNATCCRTSNNVMPVDSIQSNTQIIGLSCHSPKFAQMQTYLKDPVDREQQGSIMKWIGKS 164

Query: 61  LVN 64
           LVN
Sbjct: 165 LVN 167

The following BLAST results are available for this feature:

BLAST of PI0019403 vs.


Match Name	E-value	Identity	Description

BLAST of PI0019403 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KPT2	3.6e-15	70.31	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G582750 PE=4 SV=1	[more]
A0A5A7T0Q1	7.5e-13	66.67	Serine/threonine-protein phosphatase 7 long form-like protein OS=Cucumis melo va...	[more]
A0A0A0KNE8	3.7e-12	75.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G449150 PE=4 SV=1	[more]
A0A5A7U7U0	8.2e-12	65.08	Serine/threonine-protein phosphatase 7 long form-like protein isoform X1 OS=Cucu...	[more]
A0A5A7TI34	3.1e-11	63.49	Serine/threonine-protein phosphatase 7 long form-like protein isoform X1 OS=Cucu...	[more]

BLAST of PI0019403 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0035171.1	1.5e-12	66.67	serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var....	[more]
KAE8653099.1	7.6e-12	73.08	hypothetical protein Csa_020145 [Cucumis sativus]	[more]
KAA0051993.1	1.7e-11	65.08	serine/threonine-protein phosphatase 7 long form-like protein isoform X1 [Cucumi...	[more]
KAA0042980.1	6.5e-11	63.49	serine/threonine-protein phosphatase 7 long form-like protein isoform X1 [Cucumi...	[more]
KAA0031833.1	6.5e-11	63.49	serine/threonine-protein phosphatase 7 long form-like protein isoform X1 [Cucumi...	[more]

BLAST of PI0019403 vs. NCBI nr


Match Name	E-value	Identity	Description

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0019403.1	PI0019403.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010073	meristem maintenance