PI0019286 (gene) Melon (PI 482460) v1

Overview
NamePI0019286
Typegene
OrganismCucumis metuliferus (Melon (PI 482460) v1)
Descriptionprotein ROOT PRIMORDIUM DEFECTIVE 1
Locationchr02: 3447296 .. 3450488 (+)
RNA-Seq ExpressionPI0019286
SyntenyPI0019286
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CGCTGGCGGGGTGGCGACAAAATGTATTGAGTGGAATGCCACAGCGTGAGGATTTTTGTATTGATGCAAGAGGCTTCGATTGTCTTCTTACTAGCGAAAGGCTTTCACAAGCTCCATCGGTACGCTGGTATGACCGGGTAAGTAGAATCCCTACAGGAAACCGAATCTGAAATTCCATTTTCAAGCATTTTTCTAAAGAAAACTGTGGATTTCTCTTGAAATTTCTGGCTGTGTTGAGGGGTTTTAGATAGCGAATATTGGGTCATTGCCTTAATCTGAAATCTGGGTTGGGCTGAAATTGGGCTGAAATTTTGCTTTGGTTGTAGTCTAAAAGAGGGCCTCAGACACTTCACTCAGCGAATGACTTTGGTTTTCACTGTGAGAGGAGGAATGATCATCCCAGAGATGTTTCCTCAAAATTAGTGATTCTGATACTAATGCTTTTGCTGTGATTGAAGCATATTGTTAGAATATTGATATAATTATTAATTTTATGTTTATCCATTATCTCAACCCTCTGGGTTAATCGGTGATTTACATTGGTATCAAATTTCACCAGGGTAGAATATTGATATATTATTAAATTTACGTTTTTGGGGTCAATGGGTGATTTAACGCATACAATTTTTATTTCTAGGCGTCTACGTTTGTTTGTTCATAAAAGAAGCCACAGCTGCTGAATTTGTATGTGAAGAAAGGAGTAGTGTTTTGTGAGACAGGGTGCTGAGGTACAAATTGTGCATTAAAATGGGACCTCATATATTTAGGTCCATTGCAGAAAGGTACCGTCATCTCAATATGTTTGTCAGATGTAAAACAACATCTTCCCAATATGTTGCATCAAGAGCTAGAGATCCAACGTTTGAGAAACTGATGGATAAGTACAAAAATTTTCTAAAAGTGGTTGCTATCCAAGATCTTATCCTTGCTAATCCAAGGAATCAATCAGTATCTCTAGACTTCCTCTCAAGGCTTTCCCAGAAGCTCCATCTCAACCGTGGCGCTCCCTCCTTCCTTCGCAAATACCCTCATGTTTTTCACATCTTCTATGATCCAAACAAGTCCCTACCATTTTGCAAATTAACAGACACTGCCAATCAAATATTTTCTGAAGAGGCAGATGCTATCAATGCTTCATTGCCTCAGGTTGTTGATCGATTAGTCCGGCTTTTGTCAATGTCAAATTCTAAGATGGTACCACTGCGTGCAATTTACAAGGTGTGGAGGGAGCTTGGCCTCCCTGACGATTTTGAGGACGCTGTGATATCGAAATACTCTCATGTTTTTCAGCTTTGTGATGCTCATGAACCAAATACTCATTATCTGAAGTTGGTTGATGACATTCCGAAAAATCAATTCAGAGCAGCTGTTGAGGAATGGAGAGTTAGTCAGTGTTGTAAAGAGGACTGCACTGTTGATGAGACCGAAATCCAGTATAGTTTTAAACATAGCTACCCTCCAGGTATGCGGTTGAGAAAAATCTTCAAGGCCAAGGTTAAGGAATGGCAAAAGTGTCCATATACTGGACCATATGAGGGAATACATGACAGTAACAAGTATAAGAACACTAGTCTAGCAGTGGAAAAGCGAGCGGTTTCGATCGTTCATGAATTCATGTCTTTGACCGTGGAAAAGATGGTGGAAGTAGAGAAGATCAGCCATTTTAGGAAATGGTTTGGCATTGAGTTAAATATAAGAGATCTATTCTTGGATCATCCTGGGATATTTTATTTATCAACCAAGGGAAAAAGACATACCGTTTTCCTAAGAGAAGCATATGAGAGGGGGTGTTTAATAGATCCAAATCCAGTTTATACTGTAAGGAGAAAACTCCTATATTTAGTTGCTATGGGGGGTCGTGGTTTATCTCAGAGTAGCCTAAGACAAAAAGCAGATCAAATTCACAATGAAGATGGTGACTTCCCTCTTCTAGGTAACAAATGAATAAAGGAAAGTATGCATATTATTTCAACAAATGTTTCAAAGCTTGTCACATTCAAATTTGTGAAACATTGTCACGAGTTTGAAAGCAAAAAGGAGAATGCCGGAGAGATCAACAATTTTGTTAAGGGAATTTGAATCCATTGGGGGAGTTGATAACTAATTTCCAATATGTAAGACCTTTTTTAATACATAGAAATCGGAGGAATGGGATATTTTACTGCATCTTCTTGCAGATGTGAACATCTTTCTTTTGGGGAAGGACTATCTGAAACAATTTCATAGATTGAATGAAATATCAAAGAATTGGTGTCCATGGTTTCCCCTGATGATACACAGAATTGGCTTCAGATGCTGCTTATCGATCACCCTTTCACAGCCATGAAGAAGCATTTATGGATAAACACTTCATCAACCGTTTTGTGGAAGTGATGGGATGAAAGGAATACAAGAATCTTCCCAGATAAGGCCAAAACCACAAAGCACATCCTTGAATCAGCCGTTTACCAATGGTTTCTCTTGGTGTAAAAGCATACAAGCTATTAAAAGTTAGCAACTTTTCTTTCATTATAGCAAATTGGAAACGTATTTCTATTCCTCTTGAATAGGTCCTTTTGTATATCCTTGGATTTTTCATTCAATCAATGAAATGATTTCTTATCCACAAAATTCTCTCAGGGAAGGATTGAAGAGCAAGGGAGTTAGATTGAACGCTCCTCGCAACTTTGTCATTAGGTCTTTAGTGCAGGGAGACTTAACTGGAAAAGATGAACAACCTGATTTGGTAGTCTGAAAATGTGTTCTTTGTGATCTGCAGGTGATTATGCTCCGACCAAAGCTTAGTTGACATGGGATGGGTCTTATTCAAGATGGTACTAATAATATTTGTCATCTCCTTGTATGATTTCCATTGCATTTTCATCATCTGCATGAACTTTTTAAATACTTTAACATGTTGTCCGTTGAGTTTCCCGCTGCCACTTGGTTTCAAGTGAAAAGCCAGAGTCTGAACCATTTGGACTTGTGATTTTTGGTTGTAATGTAGAAGATTTGAAGGAAAGGAATTGAAGGATATTAATGCTTACTGATTAGGACTTATGTGATGTAAACTTCTGGTGACTATTTTCAACACCATTTTTTGCATAGATATTCACTGATTTGAGGGTATGTTTGTGCCTTTTATTGTGGAATTC

mRNA sequence

CGCTGGCGGGGTGGCGACAAAATGTATTGAGTGGAATGCCACAGCGTGAGGATTTTTGTATTGATGCAAGAGGCTTCGATTGTCTTCTTACTAGCGAAAGGCTTTCACAAGCTCCATCGGTACGCTGGTATGACCGGGCGTCTACGTTTGTTTGTTCATAAAAGAAGCCACAGCTGCTGAATTTGTATGTGAAGAAAGGAGTAGTGTTTTGTGAGACAGGGTGCTGAGGTACAAATTGTGCATTAAAATGGGACCTCATATATTTAGGTCCATTGCAGAAAGGTACCGTCATCTCAATATGTTTGTCAGATGTAAAACAACATCTTCCCAATATGTTGCATCAAGAGCTAGAGATCCAACGTTTGAGAAACTGATGGATAAGTACAAAAATTTTCTAAAAGTGGTTGCTATCCAAGATCTTATCCTTGCTAATCCAAGGAATCAATCAGTATCTCTAGACTTCCTCTCAAGGCTTTCCCAGAAGCTCCATCTCAACCGTGGCGCTCCCTCCTTCCTTCGCAAATACCCTCATGTTTTTCACATCTTCTATGATCCAAACAAGTCCCTACCATTTTGCAAATTAACAGACACTGCCAATCAAATATTTTCTGAAGAGGCAGATGCTATCAATGCTTCATTGCCTCAGGTTGTTGATCGATTAGTCCGGCTTTTGTCAATGTCAAATTCTAAGATGGTACCACTGCGTGCAATTTACAAGGTGTGGAGGGAGCTTGGCCTCCCTGACGATTTTGAGGACGCTGTGATATCGAAATACTCTCATGTTTTTCAGCTTTGTGATGCTCATGAACCAAATACTCATTATCTGAAGTTGGTTGATGACATTCCGAAAAATCAATTCAGAGCAGCTGTTGAGGAATGGAGAGTTAGTCAGTGTTGTAAAGAGGACTGCACTGTTGATGAGACCGAAATCCAGTATAGTTTTAAACATAGCTACCCTCCAGGTATGCGGTTGAGAAAAATCTTCAAGGCCAAGGTTAAGGAATGGCAAAAGTGTCCATATACTGGACCATATGAGGGAATACATGACAGTAACAAGTATAAGAACACTAGTCTAGCAGTGGAAAAGCGAGCGGTTTCGATCGTTCATGAATTCATGTCTTTGACCGTGGAAAAGATGGTGGAAGTAGAGAAGATCAGCCATTTTAGGAAATGGTTTGGCATTGAGTTAAATATAAGAGATCTATTCTTGGATCATCCTGGGATATTTTATTTATCAACCAAGGGAAAAAGACATACCGTTTTCCTAAGAGAAGCATATGAGAGGGGGTGTTTAATAGATCCAAATCCAGTTTATACTGTAAGGAGAAAACTCCTATATTTAGTTGCTATGGGGGGTCGTGGTTTATCTCAGAGTAGCCTAAGACAAAAAGCAGATCAAATTCACAATGAAGATGGTGACTTCCCTCTTCTAGGTAACAAATGAATAAAGGAAAGTATGCATATTATTTCAACAAATGTTTCAAAGCTTGTCACATTCAAATTTGTGAAACATTGTCACGAGTTTGAAAGCAAAAAGGAGAATGCCGGAGAGATCAACAATTTTGTTAAGGGAATTTGAATCCATTGGGGGAGTTGATAACTAATTTCCAATATGTAAGACCTTTTTTAATACATAGAAATCGGAGGAATGGGATATTTTACTGCATCTTCTTGCAGATGTGAACATCTTTCTTTTGGGGAAGGACTATCTGAAACAATTTCATAGATTGAATGAAATATCAAAGAATTGGTGTCCATGGTTTCCCCTGATGATACACAGAATTGGCTTCAGATGCTGCTTATCGATCACCCTTTCACAGCCATGAAGAAGCATTTATGGATAAACACTTCATCAACCGTTTTGTGGAAGTGATGGGATGAAAGGAATACAAGAATCTTCCCAGATAAGGCCAAAACCACAAAGCACATCCTTGAATCAGCCGTTTACCAATGGTTTCTCTTGGTGTAAAAGCATACAAGCTATTAAAAGGAAGGATTGAAGAGCAAGGGAGTTAGATTGAACGCTCCTCGCAACTTTGTCATTAGGTCTTTAGTGCAGGGAGACTTAACTGGAAAAGATGAACAACCTGATTTGGTAGTCTGAAAATGTGTTCTTTGTGATCTGCAGGTGATTATGCTCCGACCAAAGCTTAGTTGACATGGGATGGGTCTTATTCAAGATGGTACTAATAATATTTGTCATCTCCTTGTATGATTTCCATTGCATTTTCATCATCTGCATGAACTTTTTAAATACTTTAACATGTTGTCCGTTGAGTTTCCCGCTGCCACTTGGTTTCAAGTGAAAAGCCAGAGTCTGAACCATTTGGACTTGTGATTTTTGGTTGTAATGTAGAAGATTTGAAGGAAAGGAATTGAAGGATATTAATGCTTACTGATTAGGACTTATGTGATGTAAACTTCTGGTGACTATTTTCAACACCATTTTTTGCATAGATATTCACTGATTTGAGGGTATGTTTGTGCCTTTTATTGTGGAATTC

Coding sequence (CDS)

ATGGGACCTCATATATTTAGGTCCATTGCAGAAAGGTACCGTCATCTCAATATGTTTGTCAGATGTAAAACAACATCTTCCCAATATGTTGCATCAAGAGCTAGAGATCCAACGTTTGAGAAACTGATGGATAAGTACAAAAATTTTCTAAAAGTGGTTGCTATCCAAGATCTTATCCTTGCTAATCCAAGGAATCAATCAGTATCTCTAGACTTCCTCTCAAGGCTTTCCCAGAAGCTCCATCTCAACCGTGGCGCTCCCTCCTTCCTTCGCAAATACCCTCATGTTTTTCACATCTTCTATGATCCAAACAAGTCCCTACCATTTTGCAAATTAACAGACACTGCCAATCAAATATTTTCTGAAGAGGCAGATGCTATCAATGCTTCATTGCCTCAGGTTGTTGATCGATTAGTCCGGCTTTTGTCAATGTCAAATTCTAAGATGGTACCACTGCGTGCAATTTACAAGGTGTGGAGGGAGCTTGGCCTCCCTGACGATTTTGAGGACGCTGTGATATCGAAATACTCTCATGTTTTTCAGCTTTGTGATGCTCATGAACCAAATACTCATTATCTGAAGTTGGTTGATGACATTCCGAAAAATCAATTCAGAGCAGCTGTTGAGGAATGGAGAGTTAGTCAGTGTTGTAAAGAGGACTGCACTGTTGATGAGACCGAAATCCAGTATAGTTTTAAACATAGCTACCCTCCAGGTATGCGGTTGAGAAAAATCTTCAAGGCCAAGGTTAAGGAATGGCAAAAGTGTCCATATACTGGACCATATGAGGGAATACATGACAGTAACAAGTATAAGAACACTAGTCTAGCAGTGGAAAAGCGAGCGGTTTCGATCGTTCATGAATTCATGTCTTTGACCGTGGAAAAGATGGTGGAAGTAGAGAAGATCAGCCATTTTAGGAAATGGTTTGGCATTGAGTTAAATATAAGAGATCTATTCTTGGATCATCCTGGGATATTTTATTTATCAACCAAGGGAAAAAGACATACCGTTTTCCTAAGAGAAGCATATGAGAGGGGGTGTTTAATAGATCCAAATCCAGTTTATACTGTAAGGAGAAAACTCCTATATTTAGTTGCTATGGGGGGTCGTGGTTTATCTCAGAGTAGCCTAAGACAAAAAGCAGATCAAATTCACAATGAAGATGGTGACTTCCCTCTTCTAGGTAACAAATGA

Protein sequence

MGPHIFRSIAERYRHLNMFVRCKTTSSQYVASRARDPTFEKLMDKYKNFLKVVAIQDLILANPRNQSVSLDFLSRLSQKLHLNRGAPSFLRKYPHVFHIFYDPNKSLPFCKLTDTANQIFSEEADAINASLPQVVDRLVRLLSMSNSKMVPLRAIYKVWRELGLPDDFEDAVISKYSHVFQLCDAHEPNTHYLKLVDDIPKNQFRAAVEEWRVSQCCKEDCTVDETEIQYSFKHSYPPGMRLRKIFKAKVKEWQKCPYTGPYEGIHDSNKYKNTSLAVEKRAVSIVHEFMSLTVEKMVEVEKISHFRKWFGIELNIRDLFLDHPGIFYLSTKGKRHTVFLREAYERGCLIDPNPVYTVRRKLLYLVAMGGRGLSQSSLRQKADQIHNEDGDFPLLGNK
Homology
BLAST of PI0019286 vs. ExPASy Swiss-Prot
Match: Q689D6 (Protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Arabidopsis thaliana OX=3702 GN=RPD1 PE=1 SV=1)

HSP 1 Score: 231.9 bits (590), Expect = 1.3e-59
Identity = 133/365 (36.44%), Postives = 206/365 (56.44%), Query Frame = 0

Query: 33  RARDPTFEKLMDKYKNFLKVVAIQDLILANPRNQSVSLDFLSRLSQKLHL---NRGAPSF 92
           R RD  ++  M+  K   KVV    LIL+ P N ++++  L  L+++L L        +F
Sbjct: 46  RVRDHGYDNYMEVEKKIRKVVKFHSLILSQP-NHTIAISLLDTLARRLGLGFKQHEPGAF 105

Query: 93  LRKYPHVFHIFYDPNKSLPFCKLTDTANQIFSEEADAINASLPQVVDRLVRLLSMSNSKM 152
           L K+PHVF I+  P + + +C+LT  A      E +A+   +P  V RL +L+ MSN+  
Sbjct: 106 LLKFPHVFEIYEHPVQRILYCRLTRKALDQIRHEHEAVLDQIPDAVTRLRKLVMMSNTGR 165

Query: 153 VPLRAIYKVWRELGLPDDFEDAVISKYSHVFQLCDAHEPNTHYLKLVDDIPKNQFRAAVE 212
           + L  +     E GLP+DFE +VI K+   F+L D  E    Y+++V+  P N    A+E
Sbjct: 166 IRLEHVRIARTEFGLPEDFEYSVILKHPQFFRLIDGEETRDKYIEIVEKDP-NLSICAIE 225

Query: 213 EWRVSQCCKEDCTVDETEIQYSFKHSYPPGMRLRKIFKAKVKEWQKCPYTGPYEGIHDSN 272
             RV +       +D  ++++SF  ++PPG ++ K F+  V +WQ+ PY  PYE I   +
Sbjct: 226 --RVREIEYRTKGIDAEDVRFSFVVNFPPGFKIGKYFRIAVWKWQRLPYWSPYEDISGYD 285

Query: 273 -KYKNTSLAVEKRAVSIVHEFMSLTVEKMVEVEKISHFRKWFGIELNIRDLFLDHPGIFY 332
            +       +EKR+V+ +HE +SLTVEK + +E+I+HFR    +   +++  L H GIFY
Sbjct: 286 LRSMEAQNRLEKRSVACIHELLSLTVEKKITLERIAHFRNVMNLPKKLKEFLLQHQGIFY 345

Query: 333 LSTK---GKRHTVFLREAYERGCLIDPNPVYTVRRKLLYLVAMGGRGLS-QSSLRQKADQ 390
           +ST+   GK HTVFLRE Y+RG L++PN VY  RR+L  LV M  R     + L +  D 
Sbjct: 346 ISTRGNYGKLHTVFLREGYKRGELVEPNDVYLARRRLAELVLMSPRKAKVDAELVRYRDG 405

BLAST of PI0019286 vs. ExPASy Swiss-Prot
Match: Q65XL5 (Protein WHAT'S THIS FACTOR 1 homolog, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0571100 PE=2 SV=1)

HSP 1 Score: 151.8 bits (382), Expect = 1.7e-35
Identity = 96/345 (27.83%), Postives = 183/345 (53.04%), Query Frame = 0

Query: 27  SQYVASRARDPTFEKLMDKYKNFLKVVAIQDLILANPRNQSVSLDFLSRLSQKLHLNRGA 86
           +Q    R ++  F+ ++ + K    V+ +++++++NP ++ +SL  L R  + L L R  
Sbjct: 57  AQAAVKRRKEIPFDNVIQRDKKLKLVLKLRNILVSNP-DRVMSLRDLGRFRRDLGLTRKR 116

Query: 87  P--SFLRKYPHVFHIFYDPNKSLPFCKLTDTANQIFSEEADAINASLPQVVDRLVRLLSM 146
              + L+++P VF +  +   SL F +LT  A +++ +E    N S    V +L +LL M
Sbjct: 117 RLIALLKRFPGVFEVVEEGVYSLRF-RLTPAAERLYLDELHLKNESEGLAVTKLRKLLMM 176

Query: 147 SNSKMVPLRAIYKVWRELGLPDDFEDAVISKYSHVFQLCDAHE-PNTHYLKLVDDIPKNQ 206
           S  K + +  I  +  +LGLP +F D +  +Y   F++      P         ++  + 
Sbjct: 177 SQDKRILIEKIAHLKNDLGLPPEFRDTICLRYPQYFRVVQMDRGPGLELTHWDPELAVSA 236

Query: 207 FRAAVEEWRVSQCCKEDCTVDETEIQYSFKHSYPPGMRLRKIFKAKVKEWQKCPYTGPYE 266
              A EE R  +  + +  +D   ++++ +   P G++L +    +V ++++ PY  PY 
Sbjct: 237 AEVAEEENRAREEQERNLIIDR-PLKFN-RVKLPQGLKLSRGEARRVAQFKEMPYISPYS 296

Query: 267 GIHDSNKYKNTSLAVEKRAVSIVHEFMSLTVEKMVEVEKISHFRKWFGIELNIRDLFLDH 326
              D +  ++ S   EK A  +VHE +SLT+EK   V+ ++HFR+ F    ++R + + H
Sbjct: 297 ---DFSHLRSGSAEKEKHACGVVHEILSLTLEKRTLVDHLTHFREEFRFSQSLRGMLIRH 356

Query: 327 PGIFYLSTKGKRHTVFLREAYERGCLIDPNPVYTVRRKLLYLVAM 369
           P +FY+S KG R +VFLREAY+   L++ + +  ++ K+  LVA+
Sbjct: 357 PDMFYVSLKGDRDSVFLREAYKNSQLVEKSKLVLLKEKMRALVAV 394

BLAST of PI0019286 vs. ExPASy Swiss-Prot
Match: B6TTV8 (Protein WHAT'S THIS FACTOR 1, chloroplastic OS=Zea mays OX=4577 GN=WTF1 PE=1 SV=1)

HSP 1 Score: 151.0 bits (380), Expect = 2.9e-35
Identity = 104/379 (27.44%), Postives = 191/379 (50.40%), Query Frame = 0

Query: 27  SQYVASRARDPTFEKLMDKYKNFLKVVAIQDLILANPRNQSVSLDFLSRLSQKLHLNRGA 86
           +Q    R ++  F+ ++ + K    V+ ++++++A P ++ +SL  L R  + L L R  
Sbjct: 51  AQAAVKRRKEAPFDTVIQRDKKLKLVLKLRNILVAQP-DRVMSLRELGRFRRDLGLTRKR 110

Query: 87  P--SFLRKYPHVFHIFYDPNKSLPFCKLTDTANQIFSEEADAINASLPQVVDRLVRLLSM 146
              + LR++P VF +  +   SL F +LT  A +++ +E    N S    V +L +LL M
Sbjct: 111 RLIALLRRFPGVFDVVEEGVYSLRF-RLTPAAERLYLDELRLRNESEGLAVAKLRKLLMM 170

Query: 147 SNSKMVPLRAIYKVWRELGLPDDFEDAVISKYSHVFQLCDAHE-PNTHYLKLVDDIPKNQ 206
           S  K + +  +  +  +LGLP +F D V  +Y   F++      P         ++  + 
Sbjct: 171 SQEKRILIEKVAHLKHDLGLPPEFRDTVCLRYPQYFRVVRMDRGPALELTHWDPELAVSA 230

Query: 207 FRAAVEEWRVSQCCKEDCTVDETEIQYSFKHSYPPGMRLRKIFKAKVKEWQKCPYTGPYE 266
              A EE R  +  + +  +D   ++++ +   P G++L +    ++  +++ PY  PY 
Sbjct: 231 AELAEEESRAREAEERNLIIDR-PLKFN-RVRLPKGLKLTRGEARRIARFKEMPYISPYA 290

Query: 267 GIHDSNKYKNTSLAVEKRAVSIVHEFMSLTVEKMVEVEKISHFRKWFGIELNIRDLFLDH 326
              D +  ++ S   EK A  +VHE +SLTVEK   V+ ++HFR+ F    ++R + + H
Sbjct: 291 ---DFSHLRSGSDEKEKHACGVVHEILSLTVEKRTLVDHLTHFREEFRFSQSLRGMIIRH 350

Query: 327 PGIFYLSTKGKRHTVFLREAYERGCLIDPNPVYTVRRKLLYLVAM-----------GGRG 386
           P +FY+S KG R +VFLREAY+   L++ N +  ++ K+  LVA+           G   
Sbjct: 351 PDMFYVSFKGDRDSVFLREAYKDSQLVEKNQLVLLKEKMRALVAVPRFPRRAAVGTGEEA 410

Query: 387 LSQSSLRQKADQIHNEDGD 392
              +   Q  DQ+ +E+ D
Sbjct: 411 EGMNGSLQSRDQVSDEEYD 422

BLAST of PI0019286 vs. ExPASy Swiss-Prot
Match: A0MFS5 (Protein WHAT'S THIS FACTOR 1 homolog, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At4g01037 PE=3 SV=1)

HSP 1 Score: 148.3 bits (373), Expect = 1.9e-34
Identity = 103/341 (30.21%), Postives = 177/341 (51.91%), Query Frame = 0

Query: 33  RARDPTFEKLMDKYKNFLKVVAIQDLILANPRNQSVSLDFLSRLSQKLHL--NRGAPSFL 92
           R ++ TF+ ++ + K    V+ I+ ++++ P ++ +SL  L +  + L L   R   + L
Sbjct: 78  RRKELTFDSVVQRDKKLKLVLNIRKILVSQP-DRMMSLRGLGKYRRDLGLKKRRRFIALL 137

Query: 93  RKYPHVFHIFYDPNKSLPFCKLTDTANQIFSEEADAINASLPQVVDRLVRLLSMSNSKMV 152
           RKYP VF I  +   SL F K+T  A +++ +E    N     +V +L +L+ MS  K +
Sbjct: 138 RKYPGVFEIVEEGAYSLRF-KMTSEAERLYLDEMRIRNELEDVLVVKLRKLVMMSIDKRI 197

Query: 153 PLRAIYKVWRELGLPDDFEDAVISKYSHVFQLCDAHEPNTHYLKLVDDIPKNQFRAA--- 212
            L  I  +  +LGLP +F D +  +Y   F++     P    L+L    P+    AA   
Sbjct: 198 LLEKISHLKTDLGLPLEFRDTICQRYPQYFRVVPT--PRGPALELTHWDPELAVSAAELS 257

Query: 213 VEEWRVSQCCKEDCTVDETEIQYSFKHSYPPGMRLRKIFKAKVKEWQKCPYTGPYEGIHD 272
            ++ R  +  + +  +D        K   P G+ L K    K+ +++   Y  PY+   D
Sbjct: 258 EDDNRTRESEERNLIIDRPPKFNRVK--LPRGLNLSKSETRKISQFRDMQYISPYK---D 317

Query: 273 SNKYKNTSLAVEKRAVSIVHEFMSLTVEKMVEVEKISHFRKWFGIELNIRDLFLDHPGIF 332
            +  ++ +L  EK A  ++HE +SLT EK   V+ ++HFR+ F     +R + + HP +F
Sbjct: 318 FSHLRSGTLEKEKHACGVIHELLSLTTEKRTLVDHLTHFREEFRFSQQLRGMLIRHPDLF 377

Query: 333 YLSTKGKRHTVFLREAYERGCLIDPNPVYTVRRKLLYLVAM 369
           Y+S KG+R +VFLREAY    LID +P+  V+ K+  LV++
Sbjct: 378 YVSLKGERDSVFLREAYRNSELIDKDPLTLVKEKMRALVSV 409

BLAST of PI0019286 vs. ExPASy Swiss-Prot
Match: Q9ZUZ6 (Protein WHAT'S THIS FACTOR 9, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=WTF9 PE=4 SV=1)

HSP 1 Score: 135.6 bits (340), Expect = 1.2e-30
Identity = 95/334 (28.44%), Postives = 159/334 (47.60%), Query Frame = 0

Query: 35  RDPTFEKL--MDKYKNFLKVVAIQDLILANPRNQSVSLDFLSRLSQKLHLNRGAPSFLRK 94
           RDP F+ +  + +      VV++++ I+  P N+ + +  +S+ +++  ++     FLRK
Sbjct: 33  RDPYFDNIEHILRSSQLKSVVSLKNCIVQEP-NRCIPISAISKKTRQFDVSTKIAHFLRK 92

Query: 95  YPHVFHIFYDPNKSLPFCKLTDTANQIFSEEADAINASLPQVVDRLVRLLSMSNSKMVPL 154
           +P +F  F  P  +LP+ +LT  A ++  +E      S   + DRL +L+ MS   ++PL
Sbjct: 93  FPSIFEEFVGPEYNLPWFRLTPEATELDRQERVVYQTSADDLRDRLKKLILMSKDNVLPL 152

Query: 155 RAIYKVWRELGLPDDFEDAVISKYSHVFQLCDAHEPNTHYLKLVDDIPKNQFRAAVEEWR 214
             +  +   LGLPDD+           F+  D  +       L  D        +V +  
Sbjct: 153 SIVQGMKWYLGLPDDYLQFPDMNLDSSFRFVDMED---GVKGLAVDYNGGDKVLSVLQKN 212

Query: 215 VSQCCKEDCTVDETEIQYSFKHSYPPGMRLRKIFKAKVKEWQKCPYTGPYEGIHDSNKYK 274
             +  + + +++E E    F      G RLR   +  + E+QK PY  PY+   D +   
Sbjct: 213 AMKKRRGEVSLEEIE----FPLFPSKGCRLRVKIEDWLMEFQKLPYVSPYD---DYSCLD 272

Query: 275 NTSLAVEKRAVSIVHEFMSLTVEKMVEVEKISHFRKWFGIELNIRDLFLDHPGIFYLSTK 334
            +S   EKR V  +HE + L VE   E +K+   +K FG+   +   F  HP IFYLS K
Sbjct: 273 PSSDIAEKRVVGFLHELLCLFVEHSAERKKLLCLKKHFGLPQKVHKAFERHPQIFYLSMK 332

Query: 335 GKRHTVFLREAYERGCLIDPNPVYTVRRKLLYLV 367
            K  T  LRE Y     ++ +PV  VR+K + L+
Sbjct: 333 NKTCTAILREPYRDKASVETHPVLGVRKKYIQLM 355

BLAST of PI0019286 vs. ExPASy TrEMBL
Match: A0A0A0LWZ0 (PORR domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G600890 PE=4 SV=1)

HSP 1 Score: 791.2 bits (2042), Expect = 2.0e-225
Identity = 384/398 (96.48%), Postives = 390/398 (97.99%), Query Frame = 0

Query: 1   MGPHIFRSIAERYRHLNMFVRCKTTSSQYVASRARDPTFEKLMDKYKNFLKVVAIQDLIL 60
           MGPHIFRSIAERY HLNMFVRCK TSSQYVASRARDPTFEKLMDKYK+FLKVVAIQDLIL
Sbjct: 1   MGPHIFRSIAERYHHLNMFVRCKVTSSQYVASRARDPTFEKLMDKYKDFLKVVAIQDLIL 60

Query: 61  ANPRNQSVSLDFLSRLSQKLHLNRGAPSFLRKYPHVFHIFYDPNKSLPFCKLTDTANQIF 120
           ANPRNQSVSLDFLSRLSQKLHLNRGAPSFLRKYPH+FHIFYDPNKSLPFCKLTDTANQIF
Sbjct: 61  ANPRNQSVSLDFLSRLSQKLHLNRGAPSFLRKYPHIFHIFYDPNKSLPFCKLTDTANQIF 120

Query: 121 SEEADAINASLPQVVDRLVRLLSMSNSKMVPLRAIYKVWRELGLPDDFEDAVISKYSHVF 180
           SEEADAINASLPQVVDRLVRLLSMSNSKMVPLRAIYKVWRELGLPDDFED VISKYSHVF
Sbjct: 121 SEEADAINASLPQVVDRLVRLLSMSNSKMVPLRAIYKVWRELGLPDDFEDTVISKYSHVF 180

Query: 181 QLCDAHEPNTHYLKLVDDIPKNQFRAAVEEWRVSQCCKEDCTVDETEIQYSFKHSYPPGM 240
           QLCDAHEPNTHYLKLVDDIP+NQFRAAVEEWRV Q CKEDCTVDETEIQYSFKHSYPPGM
Sbjct: 181 QLCDAHEPNTHYLKLVDDIPRNQFRAAVEEWRVGQYCKEDCTVDETEIQYSFKHSYPPGM 240

Query: 241 RLRKIFKAKVKEWQKCPYTGPYEGIHDSNKYKNTSLAVEKRAVSIVHEFMSLTVEKMVEV 300
           RLRKIFKAKV+EWQKCPYTGPYEGI DSNKYKNTSLA+EKRAVSIVHEFM+LTVEKMVEV
Sbjct: 241 RLRKIFKAKVQEWQKCPYTGPYEGILDSNKYKNTSLALEKRAVSIVHEFMTLTVEKMVEV 300

Query: 301 EKISHFRKWFGIELNIRDLFLDHPGIFYLSTKGKRHTVFLREAYERGCLIDPNPVYTVRR 360
           EKISHFRKWFGIELNIRDLFLDHPGIFYLSTKGKRHTVFLREAYERGCLIDPNPVYTVRR
Sbjct: 301 EKISHFRKWFGIELNIRDLFLDHPGIFYLSTKGKRHTVFLREAYERGCLIDPNPVYTVRR 360

Query: 361 KLLYLVAMGGRGLSQSSLRQKADQIHNEDGDFPLLGNK 399
           KLL LVAMG RGLSQSSLRQKADQIHNEDGDFPLLGNK
Sbjct: 361 KLLDLVAMGRRGLSQSSLRQKADQIHNEDGDFPLLGNK 398

BLAST of PI0019286 vs. ExPASy TrEMBL
Match: A0A1S3BQP0 (protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Cucumis melo OX=3656 GN=LOC103492459 PE=4 SV=1)

HSP 1 Score: 790.8 bits (2041), Expect = 2.6e-225
Identity = 383/398 (96.23%), Postives = 389/398 (97.74%), Query Frame = 0

Query: 1   MGPHIFRSIAERYRHLNMFVRCKTTSSQYVASRARDPTFEKLMDKYKNFLKVVAIQDLIL 60
           MGPHIFRSI ERY HLNMFVRCK TSSQYVASRARDPTFEKLMDKYKNFLKVVAIQDLIL
Sbjct: 1   MGPHIFRSIGERYLHLNMFVRCKVTSSQYVASRARDPTFEKLMDKYKNFLKVVAIQDLIL 60

Query: 61  ANPRNQSVSLDFLSRLSQKLHLNRGAPSFLRKYPHVFHIFYDPNKSLPFCKLTDTANQIF 120
           ANPRNQSVSLDFLSRLSQKLHLNRGAPSFLRKYPH+FHIFYDPNKSLPFCKLTDTANQIF
Sbjct: 61  ANPRNQSVSLDFLSRLSQKLHLNRGAPSFLRKYPHIFHIFYDPNKSLPFCKLTDTANQIF 120

Query: 121 SEEADAINASLPQVVDRLVRLLSMSNSKMVPLRAIYKVWRELGLPDDFEDAVISKYSHVF 180
           SEEADAINASLPQVVDRLVRLLSMSNSKMVPLRAIYKVWRELGLPDDFED VISKYSHVF
Sbjct: 121 SEEADAINASLPQVVDRLVRLLSMSNSKMVPLRAIYKVWRELGLPDDFEDTVISKYSHVF 180

Query: 181 QLCDAHEPNTHYLKLVDDIPKNQFRAAVEEWRVSQCCKEDCTVDETEIQYSFKHSYPPGM 240
           QLCDAHEPNTHYLKLVDDIP+NQFRAAVEEWRV QCC+EDCTVDETEIQYSFKHSYPPGM
Sbjct: 181 QLCDAHEPNTHYLKLVDDIPRNQFRAAVEEWRVGQCCEEDCTVDETEIQYSFKHSYPPGM 240

Query: 241 RLRKIFKAKVKEWQKCPYTGPYEGIHDSNKYKNTSLAVEKRAVSIVHEFMSLTVEKMVEV 300
           RLRKIFKAKVKEWQ+CPYTGPYEGI DSNKYKNTSLA+EKRAVSIVHEFM+LTVEKMVEV
Sbjct: 241 RLRKIFKAKVKEWQQCPYTGPYEGILDSNKYKNTSLALEKRAVSIVHEFMTLTVEKMVEV 300

Query: 301 EKISHFRKWFGIELNIRDLFLDHPGIFYLSTKGKRHTVFLREAYERGCLIDPNPVYTVRR 360
           EKISHFRKWFGIELNIRDLFLDHPGIFYLSTKGKRHTVFLREAYERGCLIDPNPVYTVRR
Sbjct: 301 EKISHFRKWFGIELNIRDLFLDHPGIFYLSTKGKRHTVFLREAYERGCLIDPNPVYTVRR 360

Query: 361 KLLYLVAMGGRGLSQSSLRQKADQIHNEDGDFPLLGNK 399
           KLL LVAMG RGLSQSSLRQKADQIHNEDG FPLLGNK
Sbjct: 361 KLLDLVAMGRRGLSQSSLRQKADQIHNEDGGFPLLGNK 398

BLAST of PI0019286 vs. ExPASy TrEMBL
Match: A0A5D3CI38 (Protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold16G00540 PE=4 SV=1)

HSP 1 Score: 753.8 bits (1945), Expect = 3.6e-214
Identity = 365/380 (96.05%), Postives = 373/380 (98.16%), Query Frame = 0

Query: 18  MFVRCKTTSSQYVASRARDPTFEKLMDKYKNFLKVVAIQDLILANPRNQSVSLDFLSRLS 77
           MFVRCK TSSQYVASRARDPTFEKLMDKYKNFLKVVAIQDLI+ANPRNQSVSLDFLSRLS
Sbjct: 1   MFVRCKVTSSQYVASRARDPTFEKLMDKYKNFLKVVAIQDLIVANPRNQSVSLDFLSRLS 60

Query: 78  QKLHLNRGAPSFLRKYPHVFHIFYDPNKSLPFCKLTDTANQIFSEEADAINASLPQVVDR 137
           QKLHLNRGAPSFLRKYPH+FHIFYDPNKSLPFCKLTDTANQIFSEEADAINASLPQVVDR
Sbjct: 61  QKLHLNRGAPSFLRKYPHIFHIFYDPNKSLPFCKLTDTANQIFSEEADAINASLPQVVDR 120

Query: 138 LVRLLSMSNSKMVPLRAIYKVWRELGLPDDFEDAVISKYSHVFQLCDAHEPNTHYLKLVD 197
           LVRLLSMSNSKMVPLRAIYKVWRELGLPDDFED VISKYSHVFQLCDAHEPNTHYLKLVD
Sbjct: 121 LVRLLSMSNSKMVPLRAIYKVWRELGLPDDFEDTVISKYSHVFQLCDAHEPNTHYLKLVD 180

Query: 198 DIPKNQFRAAVEEWRVSQCCKEDCTVDETEIQYSFKHSYPPGMRLRKIFKAKVKEWQKCP 257
           DIP+NQFRAAVEEWRV QCC+EDCTVDETEIQYSFKHSYPPGMRLRKIFKAKVKEWQ+CP
Sbjct: 181 DIPRNQFRAAVEEWRVGQCCEEDCTVDETEIQYSFKHSYPPGMRLRKIFKAKVKEWQQCP 240

Query: 258 YTGPYEGIHDSNKYKNTSLAVEKRAVSIVHEFMSLTVEKMVEVEKISHFRKWFGIELNIR 317
           YTGPYEGI DSNKYKNTSLA+EKRAVSIVHEFM+LTVEKMVEVEKISHFRKWFGIELNIR
Sbjct: 241 YTGPYEGILDSNKYKNTSLALEKRAVSIVHEFMTLTVEKMVEVEKISHFRKWFGIELNIR 300

Query: 318 DLFLDHPGIFYLSTKGKRHTVFLREAYERGCLIDPNPVYTVRRKLLYLVAMGGRGLSQSS 377
           DLFLDHPGIFYLSTKGKRHTVFLREAYERGCLIDPNPVYTVRRKLL LVAMG RGLSQSS
Sbjct: 301 DLFLDHPGIFYLSTKGKRHTVFLREAYERGCLIDPNPVYTVRRKLLDLVAMGRRGLSQSS 360

Query: 378 LRQKADQIHNEDGDFPLLGN 398
           LRQKADQIHNEDG FPLLG+
Sbjct: 361 LRQKADQIHNEDGGFPLLGD 380

BLAST of PI0019286 vs. ExPASy TrEMBL
Match: A0A5A7UQD0 (Protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold181G00600 PE=4 SV=1)

HSP 1 Score: 753.8 bits (1945), Expect = 3.6e-214
Identity = 365/380 (96.05%), Postives = 373/380 (98.16%), Query Frame = 0

Query: 18  MFVRCKTTSSQYVASRARDPTFEKLMDKYKNFLKVVAIQDLILANPRNQSVSLDFLSRLS 77
           MFVRCK TSSQYVASRARDPTFEKLMDKYKNFLKVVAIQDLILANPRNQSVSLDFLSRLS
Sbjct: 1   MFVRCKVTSSQYVASRARDPTFEKLMDKYKNFLKVVAIQDLILANPRNQSVSLDFLSRLS 60

Query: 78  QKLHLNRGAPSFLRKYPHVFHIFYDPNKSLPFCKLTDTANQIFSEEADAINASLPQVVDR 137
           QKLHLNRGAPSFLRKYPH+FHIFYDPNKSLPFCKLTDTANQIFSEEADAIN+SLPQVVDR
Sbjct: 61  QKLHLNRGAPSFLRKYPHIFHIFYDPNKSLPFCKLTDTANQIFSEEADAINSSLPQVVDR 120

Query: 138 LVRLLSMSNSKMVPLRAIYKVWRELGLPDDFEDAVISKYSHVFQLCDAHEPNTHYLKLVD 197
           LVRLLSMSNSKMVPLRAIYKVWRELGLPDDFED VISKYSHVFQLCDAHEPNTHYLKLVD
Sbjct: 121 LVRLLSMSNSKMVPLRAIYKVWRELGLPDDFEDTVISKYSHVFQLCDAHEPNTHYLKLVD 180

Query: 198 DIPKNQFRAAVEEWRVSQCCKEDCTVDETEIQYSFKHSYPPGMRLRKIFKAKVKEWQKCP 257
           DIP+NQFRAAVEEWRV QCC+EDCTVDETEIQYSFKHSYPPGMRLRKIFKAKVKEWQ+CP
Sbjct: 181 DIPRNQFRAAVEEWRVGQCCEEDCTVDETEIQYSFKHSYPPGMRLRKIFKAKVKEWQQCP 240

Query: 258 YTGPYEGIHDSNKYKNTSLAVEKRAVSIVHEFMSLTVEKMVEVEKISHFRKWFGIELNIR 317
           YTGPYEGI DSNKYKNTSLA+EKRAVSIVHEFM+LTVEKMVEVEKISHFRKWFGIELNIR
Sbjct: 241 YTGPYEGILDSNKYKNTSLALEKRAVSIVHEFMTLTVEKMVEVEKISHFRKWFGIELNIR 300

Query: 318 DLFLDHPGIFYLSTKGKRHTVFLREAYERGCLIDPNPVYTVRRKLLYLVAMGGRGLSQSS 377
           DLFLDHPGIFYLSTKGKRHTVFLREAYERGCLIDPNPVYTVRRKLL LVAMG RGLSQSS
Sbjct: 301 DLFLDHPGIFYLSTKGKRHTVFLREAYERGCLIDPNPVYTVRRKLLDLVAMGRRGLSQSS 360

Query: 378 LRQKADQIHNEDGDFPLLGN 398
           LRQKADQIHNEDG FPLLG+
Sbjct: 361 LRQKADQIHNEDGGFPLLGD 380

BLAST of PI0019286 vs. ExPASy TrEMBL
Match: A0A6J1DW95 (LOW QUALITY PROTEIN: protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Momordica charantia OX=3673 GN=LOC111024077 PE=4 SV=1)

HSP 1 Score: 724.5 bits (1869), Expect = 2.3e-205
Identity = 348/394 (88.32%), Postives = 372/394 (94.42%), Query Frame = 0

Query: 1   MGPHIFRSIAERYRHLNMFVRCKTTSSQYVASRARDPTFEKLMDKYKNFLKVVAIQDLIL 60
           MGPHI RSIA+RY HL+M VRCKTTSSQYVASRARDPTFEKLMDKYKNFLKVVA+QDLIL
Sbjct: 1   MGPHIVRSIAKRYHHLSMVVRCKTTSSQYVASRARDPTFEKLMDKYKNFLKVVAVQDLIL 60

Query: 61  ANPRNQSVSLDFLSRLSQKLHLNRGAPSFLRKYPHVFHIFYDPNKSLPFCKLTDTANQIF 120
           ANPRNQSVSLDFLSRLSQKLHLNRGAPSFLRKYPH+FHIFYDPNKS PFC+LTD A  IF
Sbjct: 61  ANPRNQSVSLDFLSRLSQKLHLNRGAPSFLRKYPHIFHIFYDPNKSQPFCRLTDAATLIF 120

Query: 121 SEEADAINASLPQVVDRLVRLLSMSNSKMVPLRAIYKVWRELGLPDDFEDAVISKYSHVF 180
            EEADAINASLPQVVDRLVRLLSMSNSKM+PLRAIYKVWRELGLPDDFED+VI K+SH+F
Sbjct: 121 HEEADAINASLPQVVDRLVRLLSMSNSKMLPLRAIYKVWRELGLPDDFEDSVIYKHSHIF 180

Query: 181 QLCDAHEPNTHYLKLVDDIPKNQFRAAVEEWRVSQCCKEDCTVDETEIQYSFKHSYPPGM 240
           QLCDAHEPNTH+LKLVDDIP+N FRAAVE+WRV++CCKEDCT+DETEI+YSFKHS PPGM
Sbjct: 181 QLCDAHEPNTHFLKLVDDIPRNHFRAAVEKWRVTECCKEDCTIDETEIKYSFKHSCPPGM 240

Query: 241 RLRKIFKAKVKEWQKCPYTGPYEGIHDSNKYKNTSLAVEKRAVSIVHEFMSLTVEKMVEV 300
           RLRK FKAKVKEWQ+CPYTGPYEGI + NKY NTS+A+EKRAVSIVHEFM+LTVEKMVEV
Sbjct: 241 RLRKNFKAKVKEWQRCPYTGPYEGIFE-NKYGNTSMALEKRAVSIVHEFMTLTVEKMVEV 300

Query: 301 EKISHFRKWFGIELNIRDLFLDHPGIFYLSTKGKRHTVFLREAYERGCLIDPNPVYTVRR 360
           EKISHFRKWFGIELNIRDLFLDHPGIFYLSTKGKRHTVFLREAYERGCLIDPNPVYTVRR
Sbjct: 301 EKISHFRKWFGIELNIRDLFLDHPGIFYLSTKGKRHTVFLREAYERGCLIDPNPVYTVRR 360

Query: 361 KLLYLVAMGGRGLSQSSLRQKADQIHNEDGDFPL 395
           KLL LV MG RGLS S LRQK +QI++EDGD PL
Sbjct: 361 KLLDLVVMGRRGLSHSGLRQKVNQINSEDGDLPL 393

BLAST of PI0019286 vs. NCBI nr
Match: XP_011660083.1 (protein ROOT PRIMORDIUM DEFECTIVE 1 [Cucumis sativus] >KGN66400.1 hypothetical protein Csa_006877 [Cucumis sativus])

HSP 1 Score: 791.2 bits (2042), Expect = 4.2e-225
Identity = 384/398 (96.48%), Postives = 390/398 (97.99%), Query Frame = 0

Query: 1   MGPHIFRSIAERYRHLNMFVRCKTTSSQYVASRARDPTFEKLMDKYKNFLKVVAIQDLIL 60
           MGPHIFRSIAERY HLNMFVRCK TSSQYVASRARDPTFEKLMDKYK+FLKVVAIQDLIL
Sbjct: 1   MGPHIFRSIAERYHHLNMFVRCKVTSSQYVASRARDPTFEKLMDKYKDFLKVVAIQDLIL 60

Query: 61  ANPRNQSVSLDFLSRLSQKLHLNRGAPSFLRKYPHVFHIFYDPNKSLPFCKLTDTANQIF 120
           ANPRNQSVSLDFLSRLSQKLHLNRGAPSFLRKYPH+FHIFYDPNKSLPFCKLTDTANQIF
Sbjct: 61  ANPRNQSVSLDFLSRLSQKLHLNRGAPSFLRKYPHIFHIFYDPNKSLPFCKLTDTANQIF 120

Query: 121 SEEADAINASLPQVVDRLVRLLSMSNSKMVPLRAIYKVWRELGLPDDFEDAVISKYSHVF 180
           SEEADAINASLPQVVDRLVRLLSMSNSKMVPLRAIYKVWRELGLPDDFED VISKYSHVF
Sbjct: 121 SEEADAINASLPQVVDRLVRLLSMSNSKMVPLRAIYKVWRELGLPDDFEDTVISKYSHVF 180

Query: 181 QLCDAHEPNTHYLKLVDDIPKNQFRAAVEEWRVSQCCKEDCTVDETEIQYSFKHSYPPGM 240
           QLCDAHEPNTHYLKLVDDIP+NQFRAAVEEWRV Q CKEDCTVDETEIQYSFKHSYPPGM
Sbjct: 181 QLCDAHEPNTHYLKLVDDIPRNQFRAAVEEWRVGQYCKEDCTVDETEIQYSFKHSYPPGM 240

Query: 241 RLRKIFKAKVKEWQKCPYTGPYEGIHDSNKYKNTSLAVEKRAVSIVHEFMSLTVEKMVEV 300
           RLRKIFKAKV+EWQKCPYTGPYEGI DSNKYKNTSLA+EKRAVSIVHEFM+LTVEKMVEV
Sbjct: 241 RLRKIFKAKVQEWQKCPYTGPYEGILDSNKYKNTSLALEKRAVSIVHEFMTLTVEKMVEV 300

Query: 301 EKISHFRKWFGIELNIRDLFLDHPGIFYLSTKGKRHTVFLREAYERGCLIDPNPVYTVRR 360
           EKISHFRKWFGIELNIRDLFLDHPGIFYLSTKGKRHTVFLREAYERGCLIDPNPVYTVRR
Sbjct: 301 EKISHFRKWFGIELNIRDLFLDHPGIFYLSTKGKRHTVFLREAYERGCLIDPNPVYTVRR 360

Query: 361 KLLYLVAMGGRGLSQSSLRQKADQIHNEDGDFPLLGNK 399
           KLL LVAMG RGLSQSSLRQKADQIHNEDGDFPLLGNK
Sbjct: 361 KLLDLVAMGRRGLSQSSLRQKADQIHNEDGDFPLLGNK 398

BLAST of PI0019286 vs. NCBI nr
Match: XP_008451076.1 (PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE 1 [Cucumis melo])

HSP 1 Score: 790.8 bits (2041), Expect = 5.5e-225
Identity = 383/398 (96.23%), Postives = 389/398 (97.74%), Query Frame = 0

Query: 1   MGPHIFRSIAERYRHLNMFVRCKTTSSQYVASRARDPTFEKLMDKYKNFLKVVAIQDLIL 60
           MGPHIFRSI ERY HLNMFVRCK TSSQYVASRARDPTFEKLMDKYKNFLKVVAIQDLIL
Sbjct: 1   MGPHIFRSIGERYLHLNMFVRCKVTSSQYVASRARDPTFEKLMDKYKNFLKVVAIQDLIL 60

Query: 61  ANPRNQSVSLDFLSRLSQKLHLNRGAPSFLRKYPHVFHIFYDPNKSLPFCKLTDTANQIF 120
           ANPRNQSVSLDFLSRLSQKLHLNRGAPSFLRKYPH+FHIFYDPNKSLPFCKLTDTANQIF
Sbjct: 61  ANPRNQSVSLDFLSRLSQKLHLNRGAPSFLRKYPHIFHIFYDPNKSLPFCKLTDTANQIF 120

Query: 121 SEEADAINASLPQVVDRLVRLLSMSNSKMVPLRAIYKVWRELGLPDDFEDAVISKYSHVF 180
           SEEADAINASLPQVVDRLVRLLSMSNSKMVPLRAIYKVWRELGLPDDFED VISKYSHVF
Sbjct: 121 SEEADAINASLPQVVDRLVRLLSMSNSKMVPLRAIYKVWRELGLPDDFEDTVISKYSHVF 180

Query: 181 QLCDAHEPNTHYLKLVDDIPKNQFRAAVEEWRVSQCCKEDCTVDETEIQYSFKHSYPPGM 240
           QLCDAHEPNTHYLKLVDDIP+NQFRAAVEEWRV QCC+EDCTVDETEIQYSFKHSYPPGM
Sbjct: 181 QLCDAHEPNTHYLKLVDDIPRNQFRAAVEEWRVGQCCEEDCTVDETEIQYSFKHSYPPGM 240

Query: 241 RLRKIFKAKVKEWQKCPYTGPYEGIHDSNKYKNTSLAVEKRAVSIVHEFMSLTVEKMVEV 300
           RLRKIFKAKVKEWQ+CPYTGPYEGI DSNKYKNTSLA+EKRAVSIVHEFM+LTVEKMVEV
Sbjct: 241 RLRKIFKAKVKEWQQCPYTGPYEGILDSNKYKNTSLALEKRAVSIVHEFMTLTVEKMVEV 300

Query: 301 EKISHFRKWFGIELNIRDLFLDHPGIFYLSTKGKRHTVFLREAYERGCLIDPNPVYTVRR 360
           EKISHFRKWFGIELNIRDLFLDHPGIFYLSTKGKRHTVFLREAYERGCLIDPNPVYTVRR
Sbjct: 301 EKISHFRKWFGIELNIRDLFLDHPGIFYLSTKGKRHTVFLREAYERGCLIDPNPVYTVRR 360

Query: 361 KLLYLVAMGGRGLSQSSLRQKADQIHNEDGDFPLLGNK 399
           KLL LVAMG RGLSQSSLRQKADQIHNEDG FPLLGNK
Sbjct: 361 KLLDLVAMGRRGLSQSSLRQKADQIHNEDGGFPLLGNK 398

BLAST of PI0019286 vs. NCBI nr
Match: KAA0055679.1 (protein ROOT PRIMORDIUM DEFECTIVE 1 [Cucumis melo var. makuwa])

HSP 1 Score: 753.8 bits (1945), Expect = 7.4e-214
Identity = 365/380 (96.05%), Postives = 373/380 (98.16%), Query Frame = 0

Query: 18  MFVRCKTTSSQYVASRARDPTFEKLMDKYKNFLKVVAIQDLILANPRNQSVSLDFLSRLS 77
           MFVRCK TSSQYVASRARDPTFEKLMDKYKNFLKVVAIQDLILANPRNQSVSLDFLSRLS
Sbjct: 1   MFVRCKVTSSQYVASRARDPTFEKLMDKYKNFLKVVAIQDLILANPRNQSVSLDFLSRLS 60

Query: 78  QKLHLNRGAPSFLRKYPHVFHIFYDPNKSLPFCKLTDTANQIFSEEADAINASLPQVVDR 137
           QKLHLNRGAPSFLRKYPH+FHIFYDPNKSLPFCKLTDTANQIFSEEADAIN+SLPQVVDR
Sbjct: 61  QKLHLNRGAPSFLRKYPHIFHIFYDPNKSLPFCKLTDTANQIFSEEADAINSSLPQVVDR 120

Query: 138 LVRLLSMSNSKMVPLRAIYKVWRELGLPDDFEDAVISKYSHVFQLCDAHEPNTHYLKLVD 197
           LVRLLSMSNSKMVPLRAIYKVWRELGLPDDFED VISKYSHVFQLCDAHEPNTHYLKLVD
Sbjct: 121 LVRLLSMSNSKMVPLRAIYKVWRELGLPDDFEDTVISKYSHVFQLCDAHEPNTHYLKLVD 180

Query: 198 DIPKNQFRAAVEEWRVSQCCKEDCTVDETEIQYSFKHSYPPGMRLRKIFKAKVKEWQKCP 257
           DIP+NQFRAAVEEWRV QCC+EDCTVDETEIQYSFKHSYPPGMRLRKIFKAKVKEWQ+CP
Sbjct: 181 DIPRNQFRAAVEEWRVGQCCEEDCTVDETEIQYSFKHSYPPGMRLRKIFKAKVKEWQQCP 240

Query: 258 YTGPYEGIHDSNKYKNTSLAVEKRAVSIVHEFMSLTVEKMVEVEKISHFRKWFGIELNIR 317
           YTGPYEGI DSNKYKNTSLA+EKRAVSIVHEFM+LTVEKMVEVEKISHFRKWFGIELNIR
Sbjct: 241 YTGPYEGILDSNKYKNTSLALEKRAVSIVHEFMTLTVEKMVEVEKISHFRKWFGIELNIR 300

Query: 318 DLFLDHPGIFYLSTKGKRHTVFLREAYERGCLIDPNPVYTVRRKLLYLVAMGGRGLSQSS 377
           DLFLDHPGIFYLSTKGKRHTVFLREAYERGCLIDPNPVYTVRRKLL LVAMG RGLSQSS
Sbjct: 301 DLFLDHPGIFYLSTKGKRHTVFLREAYERGCLIDPNPVYTVRRKLLDLVAMGRRGLSQSS 360

Query: 378 LRQKADQIHNEDGDFPLLGN 398
           LRQKADQIHNEDG FPLLG+
Sbjct: 361 LRQKADQIHNEDGGFPLLGD 380

BLAST of PI0019286 vs. NCBI nr
Match: TYK09929.1 (protein ROOT PRIMORDIUM DEFECTIVE 1 [Cucumis melo var. makuwa])

HSP 1 Score: 753.8 bits (1945), Expect = 7.4e-214
Identity = 365/380 (96.05%), Postives = 373/380 (98.16%), Query Frame = 0

Query: 18  MFVRCKTTSSQYVASRARDPTFEKLMDKYKNFLKVVAIQDLILANPRNQSVSLDFLSRLS 77
           MFVRCK TSSQYVASRARDPTFEKLMDKYKNFLKVVAIQDLI+ANPRNQSVSLDFLSRLS
Sbjct: 1   MFVRCKVTSSQYVASRARDPTFEKLMDKYKNFLKVVAIQDLIVANPRNQSVSLDFLSRLS 60

Query: 78  QKLHLNRGAPSFLRKYPHVFHIFYDPNKSLPFCKLTDTANQIFSEEADAINASLPQVVDR 137
           QKLHLNRGAPSFLRKYPH+FHIFYDPNKSLPFCKLTDTANQIFSEEADAINASLPQVVDR
Sbjct: 61  QKLHLNRGAPSFLRKYPHIFHIFYDPNKSLPFCKLTDTANQIFSEEADAINASLPQVVDR 120

Query: 138 LVRLLSMSNSKMVPLRAIYKVWRELGLPDDFEDAVISKYSHVFQLCDAHEPNTHYLKLVD 197
           LVRLLSMSNSKMVPLRAIYKVWRELGLPDDFED VISKYSHVFQLCDAHEPNTHYLKLVD
Sbjct: 121 LVRLLSMSNSKMVPLRAIYKVWRELGLPDDFEDTVISKYSHVFQLCDAHEPNTHYLKLVD 180

Query: 198 DIPKNQFRAAVEEWRVSQCCKEDCTVDETEIQYSFKHSYPPGMRLRKIFKAKVKEWQKCP 257
           DIP+NQFRAAVEEWRV QCC+EDCTVDETEIQYSFKHSYPPGMRLRKIFKAKVKEWQ+CP
Sbjct: 181 DIPRNQFRAAVEEWRVGQCCEEDCTVDETEIQYSFKHSYPPGMRLRKIFKAKVKEWQQCP 240

Query: 258 YTGPYEGIHDSNKYKNTSLAVEKRAVSIVHEFMSLTVEKMVEVEKISHFRKWFGIELNIR 317
           YTGPYEGI DSNKYKNTSLA+EKRAVSIVHEFM+LTVEKMVEVEKISHFRKWFGIELNIR
Sbjct: 241 YTGPYEGILDSNKYKNTSLALEKRAVSIVHEFMTLTVEKMVEVEKISHFRKWFGIELNIR 300

Query: 318 DLFLDHPGIFYLSTKGKRHTVFLREAYERGCLIDPNPVYTVRRKLLYLVAMGGRGLSQSS 377
           DLFLDHPGIFYLSTKGKRHTVFLREAYERGCLIDPNPVYTVRRKLL LVAMG RGLSQSS
Sbjct: 301 DLFLDHPGIFYLSTKGKRHTVFLREAYERGCLIDPNPVYTVRRKLLDLVAMGRRGLSQSS 360

Query: 378 LRQKADQIHNEDGDFPLLGN 398
           LRQKADQIHNEDG FPLLG+
Sbjct: 361 LRQKADQIHNEDGGFPLLGD 380

BLAST of PI0019286 vs. NCBI nr
Match: XP_038879589.1 (protein ROOT PRIMORDIUM DEFECTIVE 1 [Benincasa hispida] >XP_038879590.1 protein ROOT PRIMORDIUM DEFECTIVE 1 [Benincasa hispida])

HSP 1 Score: 738.0 bits (1904), Expect = 4.2e-209
Identity = 353/395 (89.37%), Postives = 377/395 (95.44%), Query Frame = 0

Query: 1   MGPHIFRSIAERYRHLNMFVRCKTTSSQYVASRARDPTFEKLMDKYKNFLKVVAIQDLIL 60
           MGPHIFRS+A+RY HLNM VRCKTTSSQYVASRARDPTFEKLMDKYKN LKVVAIQDLIL
Sbjct: 10  MGPHIFRSLAKRYHHLNMVVRCKTTSSQYVASRARDPTFEKLMDKYKNLLKVVAIQDLIL 69

Query: 61  ANPRNQSVSLDFLSRLSQKLHLNRGAPSFLRKYPHVFHIFYDPNKSLPFCKLTDTANQIF 120
           ANPRNQSVSLDFLSRLSQKLHLNRGAPSFLRKYPH+FHIFYDPNKSLPFCKLTDTANQ+F
Sbjct: 70  ANPRNQSVSLDFLSRLSQKLHLNRGAPSFLRKYPHIFHIFYDPNKSLPFCKLTDTANQLF 129

Query: 121 SEEADAINASLPQVVDRLVRLLSMSNSKMVPLRAIYKVWRELGLPDDFEDAVISKYSHVF 180
           SEEADAINASLP+VVDRLVRLLSMSNSKMVPLRAIYKVWRELGLPD+FED+VISKYSH+F
Sbjct: 130 SEEADAINASLPEVVDRLVRLLSMSNSKMVPLRAIYKVWRELGLPDNFEDSVISKYSHIF 189

Query: 181 QLCDAHEPNTHYLKLVDDIPKNQFRAAVEEWRVSQCCKEDCTVDETEIQYSFKHSYPPGM 240
           QLCDAHEPNTH+LKL D IP++ FRAAVEEWRV+QCCKEDC+VDETEIQYSFKHSYPPGM
Sbjct: 190 QLCDAHEPNTHFLKLADHIPRHHFRAAVEEWRVTQCCKEDCSVDETEIQYSFKHSYPPGM 249

Query: 241 RLRKIFKAKVKEWQKCPYTGPYEG-IHDSNKYKNTSLAVEKRAVSIVHEFMSLTVEKMVE 300
           RL+K FKAKVKEWQKCPY GPYEG + +SNKYKNTS+A+EK+AVSIVHEFM+LTVEKMVE
Sbjct: 250 RLKKNFKAKVKEWQKCPYIGPYEGTLDNSNKYKNTSIALEKQAVSIVHEFMTLTVEKMVE 309

Query: 301 VEKISHFRKWFGIELNIRDLFLDHPGIFYLSTKGKRHTVFLREAYERGCLIDPNPVYTVR 360
           +EKISHFRKWFG+ELNIRDLFLDHPGIFYLSTKGKRHTVFLREAYERGCLIDPNPVYTVR
Sbjct: 310 IEKISHFRKWFGVELNIRDLFLDHPGIFYLSTKGKRHTVFLREAYERGCLIDPNPVYTVR 369

Query: 361 RKLLYLVAMGGRGLSQSSLRQKADQIHNEDGDFPL 395
           RKLL LVAMG RGLS S  RQKADQ+ NEDG+  L
Sbjct: 370 RKLLDLVAMGRRGLSHSGSRQKADQVQNEDGETSL 404

BLAST of PI0019286 vs. TAIR 10
Match: AT1G06440.1 (Ubiquitin carboxyl-terminal hydrolase family protein )

HSP 1 Score: 519.2 bits (1336), Expect = 2.9e-147
Identity = 259/369 (70.19%), Postives = 301/369 (81.57%), Query Frame = 0

Query: 20  VRCKTTSSQYVASRARDPTFEKLMDKYKNFLKVVAIQDLILANPRNQ--SVSLDFLSRLS 79
           VR  TTS+QYVASR+RDP FEKLMDKYKN LKV+AIQDL LANP     S+S++FLSRLS
Sbjct: 21  VRSTTTSAQYVASRSRDPVFEKLMDKYKNLLKVIAIQDLTLANPTADPPSLSIEFLSRLS 80

Query: 80  QKLHLNRGAPSFLRKYPHVFHIFYDPNKSLPFCKLTDTANQIFSEEADAINASLPQVVDR 139
           QKLHLNRGA SFLRKYPH+FH+ YDP K+ PFC+LTD A +I  +EA AI A+L  VVDR
Sbjct: 81  QKLHLNRGAASFLRKYPHIFHVLYDPVKAEPFCRLTDVAMEISRQEALAITATLSLVVDR 140

Query: 140 LVRLLSMSNSKMVPLRAIYKVWRELGLPDDFEDAVISKYSHVFQLCDAHEPNTHYLKLVD 199
           LVRLLSMS SK +PLRA++KVWRELGLPDDFED+VISK  H+F+L D HE NTH L+LV 
Sbjct: 141 LVRLLSMSISKSIPLRAVFKVWRELGLPDDFEDSVISKNPHLFKLSDGHESNTHILELVQ 200

Query: 200 DIPKN-QFRAAVEEWRVSQCCKEDCTVDETEIQYSFKHSYPPGMRLRKIFKAKVKEWQKC 259
           +  K  +F AAVE+WRV +C KEDC+VD TEIQ+SFKHSYPPGMRL K FKAKVKEWQ+ 
Sbjct: 201 EEEKRLEFEAAVEKWRVVECSKEDCSVDRTEIQFSFKHSYPPGMRLSKTFKAKVKEWQRL 260

Query: 260 PYTGPYEGIHDSNKYKNTSLAVEKRAVSIVHEFMSLTVEKMVEVEKISHFRKWFGIELNI 319
           PY GPYE +    K ++  + +EKRAV+I HEF++LTVEKMVEVEKISHFRK FGI+LNI
Sbjct: 261 PYVGPYEDMVGKKKSRSGVMGIEKRAVAIAHEFLNLTVEKMVEVEKISHFRKCFGIDLNI 320

Query: 320 RDLFLDHPGIFYLSTKGKRHTVFLREAYERGCLIDPNPVYTVRRKLLYLVAMGGR-GLSQ 379
           RDLFLDHPG+FY+STKGKRHTVFLREAYERG LIDPNPVY  RRKLL LV +G    LS+
Sbjct: 321 RDLFLDHPGMFYVSTKGKRHTVFLREAYERGRLIDPNPVYDARRKLLDLVLLGRHAALSE 380

Query: 380 SSLRQKADQ 385
           S     ++Q
Sbjct: 381 SGNTSMSEQ 389

BLAST of PI0019286 vs. TAIR 10
Match: AT5G45790.2 (Ubiquitin carboxyl-terminal hydrolase family protein )

HSP 1 Score: 257.7 bits (657), Expect = 1.5e-68
Identity = 138/358 (38.55%), Postives = 208/358 (58.10%), Query Frame = 0

Query: 32  SRARDPTFEKLMDKYKNFLKVVAIQDLILANPRNQSVSLDFLSRLSQKLHLNRGAPSFLR 91
           +R RD   +K++ + +    ++ I  L+ +  R   VSL  +SR    + LN    +F+ 
Sbjct: 67  NRTRDHQLDKIIPQIRKLNIILEISKLMSSKKRGPFVSLQLMSRWKNLVGLNVNVGAFIG 126

Query: 92  KYPHVFHIFYDPNKSLPFCKLTDTANQIFSEEADAINASLPQVVDRLVRLLSMSNSKMVP 151
           KYPH F IF  P      CK+T+    +  EE + +       V R+ +LL +S   ++ 
Sbjct: 127 KYPHAFEIFTHPFSKNLCCKITEKFKVLIDEEENVVRECEVDAVKRVKKLLLLSKHGVLR 186

Query: 152 LRAIYKVWRELGLPDDFEDAVISKYSHVFQLCDAHEPNTHYLKLVDDIPKNQFRAAVEEW 211
           + A+  + +ELGLP+DF D++++KYS  F+L D        L+LVD   ++   A VEEW
Sbjct: 187 VHALRLIRKELGLPEDFRDSILAKYSSEFRLVDLET-----LELVDRDDESLCVAKVEEW 246

Query: 212 RVSQCCKEDCTVDETEIQYSFKHSYPPGMRLRKIFKAKVKEWQKCPYTGPYEGIHDSNKY 271
           R  +    +  + + E  Y+F    P G ++ K F+ ++K WQ+ PY  PY    D  + 
Sbjct: 247 REVE--YREKWLSKFETNYAFPIHLPTGFKIEKGFREELKNWQRVPYVKPY----DRKEI 306

Query: 272 KNTSLAVEKRAVSIVHEFMSLTVEKMVEVEKISHFRKWFGIELNIRDLFLDHPGIFYLST 331
                  EKR V+++HE +SLTVEKMVEVE+++HFRK  GIE+N+R++ L HPGIFY+ST
Sbjct: 307 SRGLERFEKRVVAVIHELLSLTVEKMVEVERLAHFRKDLGIEVNVREVILKHPGIFYVST 366

Query: 332 KGKRHTVFLREAYERGCLIDPNPVYTVRRKLLYLVAMGGRGLSQSSLRQKADQIHNED 390
           KG   T+FLREAY +GCLI+PNP+Y VRRK+L LV +  R      L Q+ D+ H E+
Sbjct: 367 KGSSQTLFLREAYSKGCLIEPNPIYNVRRKMLDLVLLKTR--YSRMLLQREDETHREE 411

BLAST of PI0019286 vs. TAIR 10
Match: AT5G45790.1 (Ubiquitin carboxyl-terminal hydrolase family protein )

HSP 1 Score: 241.5 bits (615), Expect = 1.1e-63
Identity = 128/317 (40.38%), Postives = 188/317 (59.31%), Query Frame = 0

Query: 73  LSRLSQKLHLNRGAPSFLRKYPHVFHIFYDPNKSLPFCKLTDTANQIFSEEADAINASLP 132
           +SR    + LN    +F+ KYPH F IF  P      CK+T+    +  EE + +     
Sbjct: 23  MSRWKNLVGLNVNVGAFIGKYPHAFEIFTHPFSKNLCCKITEKFKVLIDEEENVVRECEV 82

Query: 133 QVVDRLVRLLSMSNSKMVPLRAIYKVWRELGLPDDFEDAVISKYSHVFQLCDAHEPNTHY 192
             V R+ +LL +S   ++ + A+  + +ELGLP+DF D++++KYS  F+L D        
Sbjct: 83  DAVKRVKKLLLLSKHGVLRVHALRLIRKELGLPEDFRDSILAKYSSEFRLVDLET----- 142

Query: 193 LKLVDDIPKNQFRAAVEEWRVSQCCKEDCTVDETEIQYSFKHSYPPGMRLRKIFKAKVKE 252
           L+LVD   ++   A VEEWR  +    +  + + E  Y+F    P G ++ K F+ ++K 
Sbjct: 143 LELVDRDDESLCVAKVEEWREVE--YREKWLSKFETNYAFPIHLPTGFKIEKGFREELKN 202

Query: 253 WQKCPYTGPYEGIHDSNKYKNTSLAVEKRAVSIVHEFMSLTVEKMVEVEKISHFRKWFGI 312
           WQ+ PY  PY    D  +        EKR V+++HE +SLTVEKMVEVE+++HFRK  GI
Sbjct: 203 WQRVPYVKPY----DRKEISRGLERFEKRVVAVIHELLSLTVEKMVEVERLAHFRKDLGI 262

Query: 313 ELNIRDLFLDHPGIFYLSTKGKRHTVFLREAYERGCLIDPNPVYTVRRKLLYLVAMGGRG 372
           E+N+R++ L HPGIFY+STKG   T+FLREAY +GCLI+PNP+Y VRRK+L LV +  R 
Sbjct: 263 EVNVREVILKHPGIFYVSTKGSSQTLFLREAYSKGCLIEPNPIYNVRRKMLDLVLLKTR- 322

Query: 373 LSQSSLRQKADQIHNED 390
                L Q+ D+ H E+
Sbjct: 323 -YSRMLLQREDETHREE 326

BLAST of PI0019286 vs. TAIR 10
Match: AT4G33495.1 (Ubiquitin carboxyl-terminal hydrolase family protein )

HSP 1 Score: 231.9 bits (590), Expect = 9.1e-61
Identity = 133/365 (36.44%), Postives = 206/365 (56.44%), Query Frame = 0

Query: 33  RARDPTFEKLMDKYKNFLKVVAIQDLILANPRNQSVSLDFLSRLSQKLHL---NRGAPSF 92
           R RD  ++  M+  K   KVV    LIL+ P N ++++  L  L+++L L        +F
Sbjct: 46  RVRDHGYDNYMEVEKKIRKVVKFHSLILSQP-NHTIAISLLDTLARRLGLGFKQHEPGAF 105

Query: 93  LRKYPHVFHIFYDPNKSLPFCKLTDTANQIFSEEADAINASLPQVVDRLVRLLSMSNSKM 152
           L K+PHVF I+  P + + +C+LT  A      E +A+   +P  V RL +L+ MSN+  
Sbjct: 106 LLKFPHVFEIYEHPVQRILYCRLTRKALDQIRHEHEAVLDQIPDAVTRLRKLVMMSNTGR 165

Query: 153 VPLRAIYKVWRELGLPDDFEDAVISKYSHVFQLCDAHEPNTHYLKLVDDIPKNQFRAAVE 212
           + L  +     E GLP+DFE +VI K+   F+L D  E    Y+++V+  P N    A+E
Sbjct: 166 IRLEHVRIARTEFGLPEDFEYSVILKHPQFFRLIDGEETRDKYIEIVEKDP-NLSICAIE 225

Query: 213 EWRVSQCCKEDCTVDETEIQYSFKHSYPPGMRLRKIFKAKVKEWQKCPYTGPYEGIHDSN 272
             RV +       +D  ++++SF  ++PPG ++ K F+  V +WQ+ PY  PYE I   +
Sbjct: 226 --RVREIEYRTKGIDAEDVRFSFVVNFPPGFKIGKYFRIAVWKWQRLPYWSPYEDISGYD 285

Query: 273 -KYKNTSLAVEKRAVSIVHEFMSLTVEKMVEVEKISHFRKWFGIELNIRDLFLDHPGIFY 332
            +       +EKR+V+ +HE +SLTVEK + +E+I+HFR    +   +++  L H GIFY
Sbjct: 286 LRSMEAQNRLEKRSVACIHELLSLTVEKKITLERIAHFRNVMNLPKKLKEFLLQHQGIFY 345

Query: 333 LSTK---GKRHTVFLREAYERGCLIDPNPVYTVRRKLLYLVAMGGRGLS-QSSLRQKADQ 390
           +ST+   GK HTVFLRE Y+RG L++PN VY  RR+L  LV M  R     + L +  D 
Sbjct: 346 ISTRGNYGKLHTVFLREGYKRGELVEPNDVYLARRRLAELVLMSPRKAKVDAELVRYRDG 405

BLAST of PI0019286 vs. TAIR 10
Match: AT3G58520.1 (Ubiquitin carboxyl-terminal hydrolase family protein )

HSP 1 Score: 157.9 bits (398), Expect = 1.7e-38
Identity = 111/304 (36.51%), Postives = 154/304 (50.66%), Query Frame = 0

Query: 89  FLRKYPHVFHIF-YDPNKSLPFCKLTDTANQIFSEEADAINASLPQVVDRLVRLLSMSNS 148
           FLR+YP +FH F +    SLP  KLTDTA  + S+E     +     V+RL R+L M  S
Sbjct: 90  FLRRYPTLFHEFPHARYASLPCFKLTDTALMLDSQEEIIHQSHEADTVERLCRVLMMMRS 149

Query: 149 KMVPLRAIYKVWRELGLPDDFEDAVISKYSHVFQLCDAHEPNTHYLKLVDDIPKNQFRAA 208
           K V LR+++ +  +LGLPD++E  ++ KY   F    A   N   LKLV    +  F A 
Sbjct: 150 KTVSLRSLHSLKFDLGLPDNYEKTLVMKYPDHFCFVKASNGNP-CLKLVKWRDEFAFSAL 209

Query: 209 VEEWRVSQCCKEDCTVDETEIQY----------SFKHSYPPGMRLRKIFKAKVKEWQKCP 268
                  Q   ED  V   E +Y          +F  S+P G   +K  KA + E+QK P
Sbjct: 210 -------QKRNEDNDVSGEESRYREFKRGQSTLTFPMSFPRGYGAQKKVKAWMDEFQKLP 269

Query: 269 YTGPYEGIHDSNKYKNTSLAVEKRAVSIVHEFMSLTVEKMVEVEKISHFRKWFGIELNIR 328
           Y  PY+   D +     S  +EKRAV+++HE +SLT+ K  +   +   R    I     
Sbjct: 270 YISPYD---DPSNIDPESDLMEKRAVAVLHELLSLTIHKKTKRNYLRSMRAELNIPHKFT 329

Query: 329 DLFLDHPGIFYLSTKGKRHTVFLREAYERGCLIDPNPVYTVRRKLLYLVAMG----GRGL 378
            LF  +PGIFYLS K K  TV L+E Y RG L+DP+P+  +R K  +++  G     RGL
Sbjct: 330 RLFTRYPGIFYLSLKCKTTTVILKEGYRRGKLVDPHPLTRLRDKFYHVMRTGFLYRARGL 382

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Q689D61.3e-5936.44Protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Arabidopsis thaliana OX=3702 GN=RPD1 PE=1... [more]
Q65XL51.7e-3527.83Protein WHAT'S THIS FACTOR 1 homolog, chloroplastic OS=Oryza sativa subsp. japon... [more]
B6TTV82.9e-3527.44Protein WHAT'S THIS FACTOR 1, chloroplastic OS=Zea mays OX=4577 GN=WTF1 PE=1 SV=... [more]
A0MFS51.9e-3430.21Protein WHAT'S THIS FACTOR 1 homolog, chloroplastic OS=Arabidopsis thaliana OX=3... [more]
Q9ZUZ61.2e-3028.44Protein WHAT'S THIS FACTOR 9, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=W... [more]
Match NameE-valueIdentityDescription
A0A0A0LWZ02.0e-22596.48PORR domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G600890 PE=4 S... [more]
A0A1S3BQP02.6e-22596.23protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Cucumis melo OX=3656 GN=LOC103492459 PE=4... [more]
A0A5D3CI383.6e-21496.05Protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5... [more]
A0A5A7UQD03.6e-21496.05Protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6... [more]
A0A6J1DW952.3e-20588.32LOW QUALITY PROTEIN: protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Momordica charantia ... [more]
Match NameE-valueIdentityDescription
XP_011660083.14.2e-22596.48protein ROOT PRIMORDIUM DEFECTIVE 1 [Cucumis sativus] >KGN66400.1 hypothetical p... [more]
XP_008451076.15.5e-22596.23PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE 1 [Cucumis melo][more]
KAA0055679.17.4e-21496.05protein ROOT PRIMORDIUM DEFECTIVE 1 [Cucumis melo var. makuwa][more]
TYK09929.17.4e-21496.05protein ROOT PRIMORDIUM DEFECTIVE 1 [Cucumis melo var. makuwa][more]
XP_038879589.14.2e-20989.37protein ROOT PRIMORDIUM DEFECTIVE 1 [Benincasa hispida] >XP_038879590.1 protein ... [more]
Match NameE-valueIdentityDescription
AT1G06440.12.9e-14770.19Ubiquitin carboxyl-terminal hydrolase family protein [more]
AT5G45790.21.5e-6838.55Ubiquitin carboxyl-terminal hydrolase family protein [more]
AT5G45790.11.1e-6340.38Ubiquitin carboxyl-terminal hydrolase family protein [more]
AT4G33495.19.1e-6136.44Ubiquitin carboxyl-terminal hydrolase family protein [more]
AT3G58520.11.7e-3836.51Ubiquitin carboxyl-terminal hydrolase family protein [more]
InterPro
Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR021099Plant organelle RNA recognition domainPFAMPF11955PORRcoord: 35..369
e-value: 2.5E-114
score: 381.6
NoneNo IPR availablePANTHERPTHR31476:SF15OS04G0618900 PROTEINcoord: 8..387
IPR045040PORR familyPANTHERPTHR31476PROTEIN WHAT'S THIS FACTOR 1 HOMOLOG, CHLOROPLASTICcoord: 8..387

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
PI0019286.1PI0019286.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003723 RNA binding