PI0019280 (gene) Melon (PI 482460) v1

Overview


Name	PI0019280
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	protein CHLORORESPIRATORY REDUCTION 6, chloroplastic
Location	chr02: 20339180 .. 20341230 (+)
RNA-Seq Expression	PI0019280
Synteny	PI0019280

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAACTTGAAACTAAAATGGATAAGTAAAGCAAGATGGAGGAAGAAGATAAAGCAGACATTACAACGCCTCCGCCTCCCATCATTTGGGATTGTTTCCATGTCCACTCCCACCATTAAACCTTTACTTCCACTTTCTCCTTCCTTTAATCACCCATCTCGCTCACCCATTTCATGGAGTTTTTCCAGACCCATTTCAGATTCTTCTTCTTCTTCCCCTATTTCCACCTCCTCTCGCCATCGACGACAACTATCCGCCTCGGTTGCCTTCAATCCTTCCGGAAATTTTGACCTCTCTTTGCAAGATGATGATGATGGTAACTCCTCAAACTTCTGCTCTTTCAATTTCTGAATTTAATTTGTACCCATTTCGATTTATGCATTCCCGAATTAGTTTAAATAAATTGTGAGGATTGGGGAAATTTTTTTTTTCTATCCATCTCCATTGAAGGAAATTGTGTACGTCGACTATTTGAATTGGTATGTAGTTAATCATTCATAGAGAATTGCTCTCTTCTTTGTTGCTTAGCTGACATTTTCTTGATGATGAATGATGAAATTCAAGTTCATTGCTGTATTTTGGAGAAATGGAGAACATAAACTGTTAGGGAAGATTTTACTAATGTTATCTAGTTCTTTCTTTCCCTTGAAATGGTATGGAAACCAAAGAAAAGGAAGAACAATTGTGGTGGTTATATATATGTGTGGGTGTGTTTATATGTCTGTATATGTAGGGAGTAGTTAGATGATATGATATTCAATTTGCATGGACCCATTAGAGTAAGCTTTTGGTCAATCGGTGTTTACGATGGTATTATAGCGGAAAATGTTATTTCTTCCCCAACTAGTATTGATTTCAACTTGTTAGATCTTCATCATGTTTCAAGCCCTCAAGTGAGAGGAGTGTTAAATGATATGATATTAAATTTGTTTTCACCTTTTAACTTAAGTTCTTGCGTCAATCGGTAATTTAAGAGGAGTTCTTGAAACTTTGATGGGTTTTAACTGTTTGTTAAGAACAGATTCTCCAAAAGTTGCACCTCCAATGCCACCCACTGAAGGTCGATTCGACGTGGTTATAGATAACGATGCAATTCGTTGTCTAGACTTATCCTCATTTCAGAAAACAACTGGAATAATTTCACCTTTAGCTAGTAAGTTTTGGGTTGGTGGTATGTTTATATCATTGTTTTGAAATTAGTTCTGTGATCCAATCCCTGATGAGTTCTCTTTCCTAGTATTGTTACAGCTGAGCCAAAACAATTCCTTGAATGTACAATTGGTTTTACCATTAACTATACCCGAGAAGATCCTTACGATCGACGTGAATTATCCGAATACCCTGACATAAGGCTGTGGTTTGTGAGACTTGATTCAGTCTATCCGTGGCTACCTGTTCTGCTGGACTGGAGAGCGGGAGAGCTCGCACGGTACGCAGCAATGCTCGTTCCTCACCAGGTGATGAATTGTTATGAAAATGTTGATATTAAGGAGTGTGAGAGACTTAATTTTGGGATGCTTTTGGTTGCAGATAAGTATGAGAATGGGAATTGTGTTCAATCCTGAGGCTTTGGAGCTGTTTGTGATGAAGAAAGTTTTTATAGTGTATGCATGGTTGAAGCAACATGACATTCCAAAGCCAAGATTGAAAGCAGCTAATATGGCTAGGATGCTTGGGTTTGGAATTGGAGATGAACTTTTTGACTTGATAGATCAACATCCAGTTGCCCCACCATGAAACACAACCTCGAAAAGTGCTGGTTCGATACTATGGATTCGAGAACTGATATTATTTTCTAAAATTGTAATGATAGTAAAGTTTTCAAATTTTTCATAGCTTATTGTTGACGAATGAGTAATTTAGTTATGAAGTCATGAGAAAATGTTTGTTAAAAAGAAAATAAGTTTTTATTTATTTCCATCTCCTTAAAATTACGTGCATTTGGGGGTTCTTTTTTACCCATTTAACTTTGTTGTTGTTATTGTTTTCTCTTCCCTTTTTGTTAAAATTTTTAGCACTTATCAAATATACTTTGGTTCTAGATAATTCTAT

mRNA sequence

AAAACTTGAAACTAAAATGGATAAGTAAAGCAAGATGGAGGAAGAAGATAAAGCAGACATTACAACGCCTCCGCCTCCCATCATTTGGGATTGTTTCCATGTCCACTCCCACCATTAAACCTTTACTTCCACTTTCTCCTTCCTTTAATCACCCATCTCGCTCACCCATTTCATGGAGTTTTTCCAGACCCATTTCAGATTCTTCTTCTTCTTCCCCTATTTCCACCTCCTCTCGCCATCGACGACAACTATCCGCCTCGGTTGCCTTCAATCCTTCCGGAAATTTTGACCTCTCTTTGCAAGATGATGATGATGATTCTCCAAAAGTTGCACCTCCAATGCCACCCACTGAAGGTCGATTCGACGTGGTTATAGATAACGATGCAATTCGTTGTCTAGACTTATCCTCATTTCAGAAAACAACTGGAATAATTTCACCTTTAGCTACTGAGCCAAAACAATTCCTTGAATGTACAATTGGTTTTACCATTAACTATACCCGAGAAGATCCTTACGATCGACGTGAATTATCCGAATACCCTGACATAAGGCTGTGGTTTGTGAGACTTGATTCAGTCTATCCGTGGCTACCTGTTCTGCTGGACTGGAGAGCGGGAGAGCTCGCACGGTACGCAGCAATGCTCGTTCCTCACCAGATAAGTATGAGAATGGGAATTGTGTTCAATCCTGAGGCTTTGGAGCTGTTTGTGATGAAGAAAGTTTTTATAGTGTATGCATGGTTGAAGCAACATGACATTCCAAAGCCAAGATTGAAAGCAGCTAATATGGCTAGGATGCTTGGGTTTGGAATTGGAGATGAACTTTTTGACTTGATAGATCAACATCCAGTTGCCCCACCATGAAACACAACCTCGAAAAGTGCTGGTTCGATACTATGGATTCGAGAACTGATATTATTTTCTAAAATTGTAATGATAGTAAAGTTTTCAAATTTTTCATAGCTTATTGTTGACGAATGAGTAATTTAGTTATGAAGTCATGAGAAAATGTTTGTTAAAAAGAAAATAAGTTTTTATTTATTTCCATCTCCTTAAAATTACGTGCATTTGGGGGTTCTTTTTTACCCATTTAACTTTGTTGTTGTTATTGTTTTCTCTTCCCTTTTTGTTAAAATTTTTAGCACTTATCAAATATACTTTGGTTCTAGATAATTCTAT

Coding sequence (CDS)

ATGTCCACTCCCACCATTAAACCTTTACTTCCACTTTCTCCTTCCTTTAATCACCCATCTCGCTCACCCATTTCATGGAGTTTTTCCAGACCCATTTCAGATTCTTCTTCTTCTTCCCCTATTTCCACCTCCTCTCGCCATCGACGACAACTATCCGCCTCGGTTGCCTTCAATCCTTCCGGAAATTTTGACCTCTCTTTGCAAGATGATGATGATGATTCTCCAAAAGTTGCACCTCCAATGCCACCCACTGAAGGTCGATTCGACGTGGTTATAGATAACGATGCAATTCGTTGTCTAGACTTATCCTCATTTCAGAAAACAACTGGAATAATTTCACCTTTAGCTACTGAGCCAAAACAATTCCTTGAATGTACAATTGGTTTTACCATTAACTATACCCGAGAAGATCCTTACGATCGACGTGAATTATCCGAATACCCTGACATAAGGCTGTGGTTTGTGAGACTTGATTCAGTCTATCCGTGGCTACCTGTTCTGCTGGACTGGAGAGCGGGAGAGCTCGCACGGTACGCAGCAATGCTCGTTCCTCACCAGATAAGTATGAGAATGGGAATTGTGTTCAATCCTGAGGCTTTGGAGCTGTTTGTGATGAAGAAAGTTTTTATAGTGTATGCATGGTTGAAGCAACATGACATTCCAAAGCCAAGATTGAAAGCAGCTAATATGGCTAGGATGCTTGGGTTTGGAATTGGAGATGAACTTTTTGACTTGATAGATCAACATCCAGTTGCCCCACCATGA

Protein sequence

MSTPTIKPLLPLSPSFNHPSRSPISWSFSRPISDSSSSSPISTSSRHRRQLSASVAFNPSGNFDLSLQDDDDDSPKVAPPMPPTEGRFDVVIDNDAIRCLDLSSFQKTTGIISPLATEPKQFLECTIGFTINYTREDPYDRRELSEYPDIRLWFVRLDSVYPWLPVLLDWRAGELARYAAMLVPHQISMRMGIVFNPEALELFVMKKVFIVYAWLKQHDIPKPRLKAANMARMLGFGIGDELFDLIDQHPVAPP

Homology

[Close]

BLAST of PI0019280 vs. ExPASy Swiss-Prot
Match: O82258 (Protein CHLORORESPIRATORY REDUCTION 6, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CRR6 PE=2 SV=1)

HSP 1 Score: 317.8 bits (813), Expect = 1.1e-85
Identity = 150/207 (72.46%), Postives = 175/207 (84.54%), Query Frame = 0


Query: 46  RHRRQLSASVAFNPSGNFDLSLQDDDDDSPKVAPPMPPTEGRFDVVIDNDAIRCLDLSSF 105
           R    ++ SVAFNPSGNFD+S  ++D DS KV PPMPPT GR++VVIDND+I  LDLS F
Sbjct: 39  RRAEDVAVSVAFNPSGNFDISAFENDQDSDKVEPPMPPTTGRYEVVIDNDSIGRLDLSPF 98

Query: 106 QKTTGIISP---LATEPKQFLECTIGFTINYTREDPYDRRELSEYPDIRLWFVRLDSVYP 165
           Q+  GI SP      EPK++L+ TIGFTINY REDP D RELSEYPD+RLWFVRLD++YP
Sbjct: 99  QRAIGITSPDDFGVAEPKRYLDRTIGFTINYKREDPGDPRELSEYPDVRLWFVRLDAMYP 158

Query: 166 WLPVLLDWRAGELARYAAMLVPHQISMRMGIVFNPEALELFVMKKVFIVYAWLKQHDIPK 225
           WLP+LLDWRAGELARYAAMLVPHQ+S+RMG+VFNPEALELFVM KVF+VY WLK+H +PK
Sbjct: 159 WLPLLLDWRAGELARYAAMLVPHQMSLRMGVVFNPEALELFVMNKVFVVYPWLKRHGVPK 218

Query: 226 PRLKAANMARMLGFGIGDELFDLIDQH 250
           PRLK ++MARMLGFGIGDELFDLID +
Sbjct: 219 PRLKTSDMARMLGFGIGDELFDLIDHN 245

[Close]

BLAST of PI0019280 vs. ExPASy TrEMBL
Match: A0A0A0LTF0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G264560 PE=4 SV=1)

HSP 1 Score: 492.3 bits (1266), Expect = 1.2e-135
Identity = 243/254 (95.67%), Postives = 246/254 (96.85%), Query Frame = 0


Query: 1   MSTPTIKPLLPLSPSFNHPSRSPISWSFSRPISDSSSSSPISTSSRHRRQLSASVAFNPS 60
           MSTPTIKP  PLSPSFNHPSRSPISWSFSRPISDSS SS ISTSSRHRRQLSASV+FNPS
Sbjct: 1   MSTPTIKPSFPLSPSFNHPSRSPISWSFSRPISDSSPSSLISTSSRHRRQLSASVSFNPS 60

Query: 61  GNFDLSLQDDDDDSPKVAPPMPPTEGRFDVVIDNDAIRCLDLSSFQKTTGIISPLATEPK 120
           GNFDLS QDDDDDS KVAPPMPPTEGRFDVVIDNDAIRCLDLSSFQ TTGI+SPLATEPK
Sbjct: 61  GNFDLSFQDDDDDSSKVAPPMPPTEGRFDVVIDNDAIRCLDLSSFQTTTGIVSPLATEPK 120

Query: 121 QFLECTIGFTINYTREDPYDRRELSEYPDIRLWFVRLDSVYPWLPVLLDWRAGELARYAA 180
           QFLE TIGFTINYTREDPYDRRELSEYPDIRLWFVRLDSVYPWLPVLLDWRAGELARYAA
Sbjct: 121 QFLERTIGFTINYTREDPYDRRELSEYPDIRLWFVRLDSVYPWLPVLLDWRAGELARYAA 180

Query: 181 MLVPHQISMRMGIVFNPEALELFVMKKVFIVYAWLKQHDIPKPRLKAANMARMLGFGIGD 240
           MLVPHQISMRMGIVFNPEALELFVMKKVFIVY+WLKQHDIPKPRLKAANMARMLGFGIGD
Sbjct: 181 MLVPHQISMRMGIVFNPEALELFVMKKVFIVYSWLKQHDIPKPRLKAANMARMLGFGIGD 240

Query: 241 ELFDLIDQHPVAPP 255
           ELFDLIDQHPVAPP
Sbjct: 241 ELFDLIDQHPVAPP 254

[Close]

BLAST of PI0019280 vs. ExPASy TrEMBL
Match: A0A1S3B982 (protein CHLORORESPIRATORY REDUCTION 6, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103487393 PE=4 SV=1)

HSP 1 Score: 491.9 bits (1265), Expect = 1.6e-135
Identity = 245/254 (96.46%), Postives = 246/254 (96.85%), Query Frame = 0


Query: 1   MSTPTIKPLLPLSPSFNHPSRSPISWSFSRPISDSSSSSPISTSSRHRRQLSASVAFNPS 60
           MSTPTIKP LPLSPSFNHPSRSPISWSFSRPI   S SSPISTSSRHR QLSASVAFNPS
Sbjct: 1   MSTPTIKPPLPLSPSFNHPSRSPISWSFSRPI---SPSSPISTSSRHRPQLSASVAFNPS 60

Query: 61  GNFDLSLQDDDDDSPKVAPPMPPTEGRFDVVIDNDAIRCLDLSSFQKTTGIISPLATEPK 120
           GNFDLS QDDDDDSPKVAPPMPPTEGRFDVVIDNDAIRCLDLSSFQKTTGIISPLATEPK
Sbjct: 61  GNFDLSFQDDDDDSPKVAPPMPPTEGRFDVVIDNDAIRCLDLSSFQKTTGIISPLATEPK 120

Query: 121 QFLECTIGFTINYTREDPYDRRELSEYPDIRLWFVRLDSVYPWLPVLLDWRAGELARYAA 180
           QFLE TIGFTINYTREDPYDRRELSEYPDIRLWFVRLDSVYPWLPVLLDWRAGELARYAA
Sbjct: 121 QFLERTIGFTINYTREDPYDRRELSEYPDIRLWFVRLDSVYPWLPVLLDWRAGELARYAA 180

Query: 181 MLVPHQISMRMGIVFNPEALELFVMKKVFIVYAWLKQHDIPKPRLKAANMARMLGFGIGD 240
           MLVPHQISMRMGIVFNPEALELFVMKKVFIVY+WLKQHDIPKPRLKAANMARMLGFGIGD
Sbjct: 181 MLVPHQISMRMGIVFNPEALELFVMKKVFIVYSWLKQHDIPKPRLKAANMARMLGFGIGD 240

Query: 241 ELFDLIDQHPVAPP 255
           ELFDLIDQHPVAPP
Sbjct: 241 ELFDLIDQHPVAPP 251

[Close]

BLAST of PI0019280 vs. ExPASy TrEMBL
Match: A0A6J1JFH1 (protein CHLORORESPIRATORY REDUCTION 6, chloroplastic isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111485264 PE=4 SV=1)

HSP 1 Score: 471.5 bits (1212), Expect = 2.3e-129
Identity = 233/254 (91.73%), Postives = 240/254 (94.49%), Query Frame = 0


Query: 1   MSTPTIKPLLPLSPSFNHPSRSPISWSFSRPISDSSSSSPISTSSRHRRQLSASVAFNPS 60
           MSTP IKPLLPLSPSFNHPSRSPISWSF RPISDSS S  I +SSR RRQ+SASVAFNPS
Sbjct: 1   MSTPAIKPLLPLSPSFNHPSRSPISWSFCRPISDSSPSCSIFSSSRQRRQVSASVAFNPS 60

Query: 61  GNFDLSLQDDDDDSPKVAPPMPPTEGRFDVVIDNDAIRCLDLSSFQKTTGIISPLATEPK 120
           G FDLSLQDD+DDSPKV+PPMPPTEGRFDVVIDND IR LDLSSFQKTTGIISPLATEPK
Sbjct: 61  GKFDLSLQDDEDDSPKVSPPMPPTEGRFDVVIDNDVIRHLDLSSFQKTTGIISPLATEPK 120

Query: 121 QFLECTIGFTINYTREDPYDRRELSEYPDIRLWFVRLDSVYPWLPVLLDWRAGELARYAA 180
           QFLE TIGFTINYTREDP+DRRELSEYPDIRLWFVRLDS YPWLPVLLDWRAGELARYAA
Sbjct: 121 QFLERTIGFTINYTREDPHDRRELSEYPDIRLWFVRLDSEYPWLPVLLDWRAGELARYAA 180

Query: 181 MLVPHQISMRMGIVFNPEALELFVMKKVFIVYAWLKQHDIPKPRLKAANMARMLGFGIGD 240
           MLVPHQISMRMGIVFNPEALELFVMKKVFIVY+WLK+HDIPKPRLK ANMARMLGFGIGD
Sbjct: 181 MLVPHQISMRMGIVFNPEALELFVMKKVFIVYSWLKKHDIPKPRLKTANMARMLGFGIGD 240

Query: 241 ELFDLIDQHPVAPP 255
           ELFDLIDQHPV PP
Sbjct: 241 ELFDLIDQHPVVPP 254

[Close]

BLAST of PI0019280 vs. ExPASy TrEMBL
Match: A0A6J1E1R8 (protein CHLORORESPIRATORY REDUCTION 6, chloroplastic isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111430041 PE=4 SV=1)

HSP 1 Score: 470.7 bits (1210), Expect = 3.9e-129
Identity = 234/254 (92.13%), Postives = 239/254 (94.09%), Query Frame = 0


Query: 1   MSTPTIKPLLPLSPSFNHPSRSPISWSFSRPISDSSSSSPISTSSRHRRQLSASVAFNPS 60
           MSTP IKPLLPLSPSFNHPSRSPISWSF RPISDSS    I TSSR RRQ+SASVAFNPS
Sbjct: 1   MSTPAIKPLLPLSPSFNHPSRSPISWSFCRPISDSSPFCSIFTSSRQRRQVSASVAFNPS 60

Query: 61  GNFDLSLQDDDDDSPKVAPPMPPTEGRFDVVIDNDAIRCLDLSSFQKTTGIISPLATEPK 120
           G FDLSLQDD+DDS KV+PPMPPTEGRFDVVIDND IR LDLSSFQKTTGIISPLATEPK
Sbjct: 61  GKFDLSLQDDEDDSSKVSPPMPPTEGRFDVVIDNDVIRHLDLSSFQKTTGIISPLATEPK 120

Query: 121 QFLECTIGFTINYTREDPYDRRELSEYPDIRLWFVRLDSVYPWLPVLLDWRAGELARYAA 180
           QFLE TIGFTINYTREDP+DRRELSEYPDIRLWFVRLDS YPWLPVLLDWRAGELARYAA
Sbjct: 121 QFLERTIGFTINYTREDPHDRRELSEYPDIRLWFVRLDSEYPWLPVLLDWRAGELARYAA 180

Query: 181 MLVPHQISMRMGIVFNPEALELFVMKKVFIVYAWLKQHDIPKPRLKAANMARMLGFGIGD 240
           MLVPHQISMRMGIVFNPEALELFVMKKVFIVY+WLKQHDIPKPRLK ANMARMLGFGIGD
Sbjct: 181 MLVPHQISMRMGIVFNPEALELFVMKKVFIVYSWLKQHDIPKPRLKTANMARMLGFGIGD 240

Query: 241 ELFDLIDQHPVAPP 255
           ELFDLIDQHPVAPP
Sbjct: 241 ELFDLIDQHPVAPP 254

[Close]

BLAST of PI0019280 vs. ExPASy TrEMBL
Match: A0A6J1C097 (protein CHLORORESPIRATORY REDUCTION 6, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111007292 PE=4 SV=1)

HSP 1 Score: 444.1 bits (1141), Expect = 3.9e-121
Identity = 219/254 (86.22%), Postives = 228/254 (89.76%), Query Frame = 0


Query: 1   MSTPTIKPLLPLSPSFNHPSRSPISWSFSRPISDSSSSSPISTSSRHRRQLSASVAFNPS 60
           M+TP IKPLLPLSPS N PSRSP SWSF RP           T  RHRRQ++ASVAFNPS
Sbjct: 1   MTTPAIKPLLPLSPSINQPSRSPASWSFCRP-----------TFPRHRRQVAASVAFNPS 60

Query: 61  GNFDLSLQDDDDDSPKVAPPMPPTEGRFDVVIDNDAIRCLDLSSFQKTTGIISPLATEPK 120
           GNF+LSLQDD+DDSPKVAPPMPPT+GRFDVVIDND IR LDLS FQKTTGIISPL+TEPK
Sbjct: 61  GNFELSLQDDEDDSPKVAPPMPPTDGRFDVVIDNDTIRRLDLSPFQKTTGIISPLSTEPK 120

Query: 121 QFLECTIGFTINYTREDPYDRRELSEYPDIRLWFVRLDSVYPWLPVLLDWRAGELARYAA 180
           QFLE TIGFTINYTREDPYDRRELSEYPDIRLWFVRLDSVYPWLPVLLDWRAGELARYAA
Sbjct: 121 QFLERTIGFTINYTREDPYDRRELSEYPDIRLWFVRLDSVYPWLPVLLDWRAGELARYAA 180

Query: 181 MLVPHQISMRMGIVFNPEALELFVMKKVFIVYAWLKQHDIPKPRLKAANMARMLGFGIGD 240
           MLVPHQISMRMGIVFNPEALELFVM KVF VY+WLKQHDIPKPRLK  NMARMLGFGIGD
Sbjct: 181 MLVPHQISMRMGIVFNPEALELFVMNKVFTVYSWLKQHDIPKPRLKTGNMARMLGFGIGD 240

Query: 241 ELFDLIDQHPVAPP 255
           ELFDLIDQ+PVAPP
Sbjct: 241 ELFDLIDQNPVAPP 243

[Close]

BLAST of PI0019280 vs. NCBI nr
Match: XP_011655753.1 (protein CHLORORESPIRATORY REDUCTION 6, chloroplastic [Cucumis sativus] >KGN65205.1 hypothetical protein Csa_020038 [Cucumis sativus])

HSP 1 Score: 492.3 bits (1266), Expect = 2.6e-135
Identity = 243/254 (95.67%), Postives = 246/254 (96.85%), Query Frame = 0


Query: 1   MSTPTIKPLLPLSPSFNHPSRSPISWSFSRPISDSSSSSPISTSSRHRRQLSASVAFNPS 60
           MSTPTIKP  PLSPSFNHPSRSPISWSFSRPISDSS SS ISTSSRHRRQLSASV+FNPS
Sbjct: 1   MSTPTIKPSFPLSPSFNHPSRSPISWSFSRPISDSSPSSLISTSSRHRRQLSASVSFNPS 60

Query: 61  GNFDLSLQDDDDDSPKVAPPMPPTEGRFDVVIDNDAIRCLDLSSFQKTTGIISPLATEPK 120
           GNFDLS QDDDDDS KVAPPMPPTEGRFDVVIDNDAIRCLDLSSFQ TTGI+SPLATEPK
Sbjct: 61  GNFDLSFQDDDDDSSKVAPPMPPTEGRFDVVIDNDAIRCLDLSSFQTTTGIVSPLATEPK 120

Query: 121 QFLECTIGFTINYTREDPYDRRELSEYPDIRLWFVRLDSVYPWLPVLLDWRAGELARYAA 180
           QFLE TIGFTINYTREDPYDRRELSEYPDIRLWFVRLDSVYPWLPVLLDWRAGELARYAA
Sbjct: 121 QFLERTIGFTINYTREDPYDRRELSEYPDIRLWFVRLDSVYPWLPVLLDWRAGELARYAA 180

Query: 181 MLVPHQISMRMGIVFNPEALELFVMKKVFIVYAWLKQHDIPKPRLKAANMARMLGFGIGD 240
           MLVPHQISMRMGIVFNPEALELFVMKKVFIVY+WLKQHDIPKPRLKAANMARMLGFGIGD
Sbjct: 181 MLVPHQISMRMGIVFNPEALELFVMKKVFIVYSWLKQHDIPKPRLKAANMARMLGFGIGD 240

Query: 241 ELFDLIDQHPVAPP 255
           ELFDLIDQHPVAPP
Sbjct: 241 ELFDLIDQHPVAPP 254

[Close]

BLAST of PI0019280 vs. NCBI nr
Match: XP_008443914.1 (PREDICTED: protein CHLORORESPIRATORY REDUCTION 6, chloroplastic [Cucumis melo])

HSP 1 Score: 491.9 bits (1265), Expect = 3.3e-135
Identity = 245/254 (96.46%), Postives = 246/254 (96.85%), Query Frame = 0


Query: 1   MSTPTIKPLLPLSPSFNHPSRSPISWSFSRPISDSSSSSPISTSSRHRRQLSASVAFNPS 60
           MSTPTIKP LPLSPSFNHPSRSPISWSFSRPI   S SSPISTSSRHR QLSASVAFNPS
Sbjct: 1   MSTPTIKPPLPLSPSFNHPSRSPISWSFSRPI---SPSSPISTSSRHRPQLSASVAFNPS 60

Query: 61  GNFDLSLQDDDDDSPKVAPPMPPTEGRFDVVIDNDAIRCLDLSSFQKTTGIISPLATEPK 120
           GNFDLS QDDDDDSPKVAPPMPPTEGRFDVVIDNDAIRCLDLSSFQKTTGIISPLATEPK
Sbjct: 61  GNFDLSFQDDDDDSPKVAPPMPPTEGRFDVVIDNDAIRCLDLSSFQKTTGIISPLATEPK 120

Query: 121 QFLECTIGFTINYTREDPYDRRELSEYPDIRLWFVRLDSVYPWLPVLLDWRAGELARYAA 180
           QFLE TIGFTINYTREDPYDRRELSEYPDIRLWFVRLDSVYPWLPVLLDWRAGELARYAA
Sbjct: 121 QFLERTIGFTINYTREDPYDRRELSEYPDIRLWFVRLDSVYPWLPVLLDWRAGELARYAA 180

Query: 181 MLVPHQISMRMGIVFNPEALELFVMKKVFIVYAWLKQHDIPKPRLKAANMARMLGFGIGD 240
           MLVPHQISMRMGIVFNPEALELFVMKKVFIVY+WLKQHDIPKPRLKAANMARMLGFGIGD
Sbjct: 181 MLVPHQISMRMGIVFNPEALELFVMKKVFIVYSWLKQHDIPKPRLKAANMARMLGFGIGD 240

Query: 241 ELFDLIDQHPVAPP 255
           ELFDLIDQHPVAPP
Sbjct: 241 ELFDLIDQHPVAPP 251

[Close]

BLAST of PI0019280 vs. NCBI nr
Match: XP_038876902.1 (protein CHLORORESPIRATORY REDUCTION 6, chloroplastic [Benincasa hispida])

HSP 1 Score: 485.3 bits (1248), Expect = 3.1e-133
Identity = 239/254 (94.09%), Postives = 244/254 (96.06%), Query Frame = 0


Query: 1   MSTPTIKPLLPLSPSFNHPSRSPISWSFSRPISDSSSSSPISTSSRHRRQLSASVAFNPS 60
           MST  IKP LPL PSFNHPSRSPISWSF RPISDSS S PISTSSRHRRQ+SASVAFNPS
Sbjct: 1   MSTSAIKPSLPLPPSFNHPSRSPISWSFCRPISDSSPSFPISTSSRHRRQVSASVAFNPS 60

Query: 61  GNFDLSLQDDDDDSPKVAPPMPPTEGRFDVVIDNDAIRCLDLSSFQKTTGIISPLATEPK 120
           GNFDLSLQDDDDDSPKVAPPMPPTEGRFDVVIDNDAIR LDLSSFQKTTGIISPLATEPK
Sbjct: 61  GNFDLSLQDDDDDSPKVAPPMPPTEGRFDVVIDNDAIRRLDLSSFQKTTGIISPLATEPK 120

Query: 121 QFLECTIGFTINYTREDPYDRRELSEYPDIRLWFVRLDSVYPWLPVLLDWRAGELARYAA 180
           QFLE TIGFTINYTREDPYDRRELSEYPDIRLWFVRLDSVYPWLPVLLDWRAGELARYAA
Sbjct: 121 QFLESTIGFTINYTREDPYDRRELSEYPDIRLWFVRLDSVYPWLPVLLDWRAGELARYAA 180

Query: 181 MLVPHQISMRMGIVFNPEALELFVMKKVFIVYAWLKQHDIPKPRLKAANMARMLGFGIGD 240
           ML+PHQISMRMGIVFNPEALELFVMKKVFIVY+WLK+H+IPKPRLK ANMARMLGFGIGD
Sbjct: 181 MLIPHQISMRMGIVFNPEALELFVMKKVFIVYSWLKEHEIPKPRLKTANMARMLGFGIGD 240

Query: 241 ELFDLIDQHPVAPP 255
           ELFDLIDQHPVAPP
Sbjct: 241 ELFDLIDQHPVAPP 254

[Close]

BLAST of PI0019280 vs. NCBI nr
Match: XP_022987841.1 (protein CHLORORESPIRATORY REDUCTION 6, chloroplastic isoform X1 [Cucurbita maxima])

HSP 1 Score: 471.5 bits (1212), Expect = 4.7e-129
Identity = 233/254 (91.73%), Postives = 240/254 (94.49%), Query Frame = 0


Query: 1   MSTPTIKPLLPLSPSFNHPSRSPISWSFSRPISDSSSSSPISTSSRHRRQLSASVAFNPS 60
           MSTP IKPLLPLSPSFNHPSRSPISWSF RPISDSS S  I +SSR RRQ+SASVAFNPS
Sbjct: 1   MSTPAIKPLLPLSPSFNHPSRSPISWSFCRPISDSSPSCSIFSSSRQRRQVSASVAFNPS 60

Query: 61  GNFDLSLQDDDDDSPKVAPPMPPTEGRFDVVIDNDAIRCLDLSSFQKTTGIISPLATEPK 120
           G FDLSLQDD+DDSPKV+PPMPPTEGRFDVVIDND IR LDLSSFQKTTGIISPLATEPK
Sbjct: 61  GKFDLSLQDDEDDSPKVSPPMPPTEGRFDVVIDNDVIRHLDLSSFQKTTGIISPLATEPK 120

Query: 121 QFLECTIGFTINYTREDPYDRRELSEYPDIRLWFVRLDSVYPWLPVLLDWRAGELARYAA 180
           QFLE TIGFTINYTREDP+DRRELSEYPDIRLWFVRLDS YPWLPVLLDWRAGELARYAA
Sbjct: 121 QFLERTIGFTINYTREDPHDRRELSEYPDIRLWFVRLDSEYPWLPVLLDWRAGELARYAA 180

Query: 181 MLVPHQISMRMGIVFNPEALELFVMKKVFIVYAWLKQHDIPKPRLKAANMARMLGFGIGD 240
           MLVPHQISMRMGIVFNPEALELFVMKKVFIVY+WLK+HDIPKPRLK ANMARMLGFGIGD
Sbjct: 181 MLVPHQISMRMGIVFNPEALELFVMKKVFIVYSWLKKHDIPKPRLKTANMARMLGFGIGD 240

Query: 241 ELFDLIDQHPVAPP 255
           ELFDLIDQHPV PP
Sbjct: 241 ELFDLIDQHPVVPP 254

[Close]

BLAST of PI0019280 vs. NCBI nr
Match: XP_022921932.1 (protein CHLORORESPIRATORY REDUCTION 6, chloroplastic isoform X1 [Cucurbita moschata])

HSP 1 Score: 470.7 bits (1210), Expect = 8.0e-129
Identity = 234/254 (92.13%), Postives = 239/254 (94.09%), Query Frame = 0


Query: 1   MSTPTIKPLLPLSPSFNHPSRSPISWSFSRPISDSSSSSPISTSSRHRRQLSASVAFNPS 60
           MSTP IKPLLPLSPSFNHPSRSPISWSF RPISDSS    I TSSR RRQ+SASVAFNPS
Sbjct: 1   MSTPAIKPLLPLSPSFNHPSRSPISWSFCRPISDSSPFCSIFTSSRQRRQVSASVAFNPS 60

Query: 61  GNFDLSLQDDDDDSPKVAPPMPPTEGRFDVVIDNDAIRCLDLSSFQKTTGIISPLATEPK 120
           G FDLSLQDD+DDS KV+PPMPPTEGRFDVVIDND IR LDLSSFQKTTGIISPLATEPK
Sbjct: 61  GKFDLSLQDDEDDSSKVSPPMPPTEGRFDVVIDNDVIRHLDLSSFQKTTGIISPLATEPK 120

Query: 121 QFLECTIGFTINYTREDPYDRRELSEYPDIRLWFVRLDSVYPWLPVLLDWRAGELARYAA 180
           QFLE TIGFTINYTREDP+DRRELSEYPDIRLWFVRLDS YPWLPVLLDWRAGELARYAA
Sbjct: 121 QFLERTIGFTINYTREDPHDRRELSEYPDIRLWFVRLDSEYPWLPVLLDWRAGELARYAA 180

Query: 181 MLVPHQISMRMGIVFNPEALELFVMKKVFIVYAWLKQHDIPKPRLKAANMARMLGFGIGD 240
           MLVPHQISMRMGIVFNPEALELFVMKKVFIVY+WLKQHDIPKPRLK ANMARMLGFGIGD
Sbjct: 181 MLVPHQISMRMGIVFNPEALELFVMKKVFIVYSWLKQHDIPKPRLKTANMARMLGFGIGD 240

Query: 241 ELFDLIDQHPVAPP 255
           ELFDLIDQHPVAPP
Sbjct: 241 ELFDLIDQHPVAPP 254

[Close]

BLAST of PI0019280 vs. TAIR 10
Match: AT2G47910.1 (chlororespiratory reduction 6 )

HSP 1 Score: 317.8 bits (813), Expect = 8.0e-87
Identity = 150/207 (72.46%), Postives = 175/207 (84.54%), Query Frame = 0


Query: 46  RHRRQLSASVAFNPSGNFDLSLQDDDDDSPKVAPPMPPTEGRFDVVIDNDAIRCLDLSSF 105
           R    ++ SVAFNPSGNFD+S  ++D DS KV PPMPPT GR++VVIDND+I  LDLS F
Sbjct: 39  RRAEDVAVSVAFNPSGNFDISAFENDQDSDKVEPPMPPTTGRYEVVIDNDSIGRLDLSPF 98

Query: 106 QKTTGIISP---LATEPKQFLECTIGFTINYTREDPYDRRELSEYPDIRLWFVRLDSVYP 165
           Q+  GI SP      EPK++L+ TIGFTINY REDP D RELSEYPD+RLWFVRLD++YP
Sbjct: 99  QRAIGITSPDDFGVAEPKRYLDRTIGFTINYKREDPGDPRELSEYPDVRLWFVRLDAMYP 158

Query: 166 WLPVLLDWRAGELARYAAMLVPHQISMRMGIVFNPEALELFVMKKVFIVYAWLKQHDIPK 225
           WLP+LLDWRAGELARYAAMLVPHQ+S+RMG+VFNPEALELFVM KVF+VY WLK+H +PK
Sbjct: 159 WLPLLLDWRAGELARYAAMLVPHQMSLRMGVVFNPEALELFVMNKVFVVYPWLKRHGVPK 218

Query: 226 PRLKAANMARMLGFGIGDELFDLIDQH 250
           PRLK ++MARMLGFGIGDELFDLID +
Sbjct: 219 PRLKTSDMARMLGFGIGDELFDLIDHN 245

[Close]

BLAST of PI0019280 vs. TAIR 10
Match: AT2G47910.2 (chlororespiratory reduction 6 )

HSP 1 Score: 290.4 bits (742), Expect = 1.4e-78
Identity = 136/180 (75.56%), Postives = 156/180 (86.67%), Query Frame = 0


Query: 73  DSPKVAPPMPPTEGRFDVVIDNDAIRCLDLSSFQKTTGIISP---LATEPKQFLECTIGF 132
           DS KV PPMPPT GR++VVIDND+I  LDLS FQ+  GI SP      EPK++L+ TIGF
Sbjct: 18  DSDKVEPPMPPTTGRYEVVIDNDSIGRLDLSPFQRAIGITSPDDFGVAEPKRYLDRTIGF 77

Query: 133 TINYTREDPYDRRELSEYPDIRLWFVRLDSVYPWLPVLLDWRAGELARYAAMLVPHQISM 192
           TINY REDP D RELSEYPD+RLWFVRLD++YPWLP+LLDWRAGELARYAAMLVPHQ+S+
Sbjct: 78  TINYKREDPGDPRELSEYPDVRLWFVRLDAMYPWLPLLLDWRAGELARYAAMLVPHQMSL 137

Query: 193 RMGIVFNPEALELFVMKKVFIVYAWLKQHDIPKPRLKAANMARMLGFGIGDELFDLIDQH 250
           RMG+VFNPEALELFVM KVF+VY WLK+H +PKPRLK ++MARMLGFGIGDELFDLID +
Sbjct: 138 RMGVVFNPEALELFVMNKVFVVYPWLKRHGVPKPRLKTSDMARMLGFGIGDELFDLIDHN 197

The following BLAST results are available for this feature:

BLAST of PI0019280 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O82258	1.1e-85	72.46	Protein CHLORORESPIRATORY REDUCTION 6, chloroplastic OS=Arabidopsis thaliana OX=...	[more]

BLAST of PI0019280 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LTF0	1.2e-135	95.67	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G264560 PE=4 SV=1	[more]
A0A1S3B982	1.6e-135	96.46	protein CHLORORESPIRATORY REDUCTION 6, chloroplastic OS=Cucumis melo OX=3656 GN=...	[more]
A0A6J1JFH1	2.3e-129	91.73	protein CHLORORESPIRATORY REDUCTION 6, chloroplastic isoform X1 OS=Cucurbita max...	[more]
A0A6J1E1R8	3.9e-129	92.13	protein CHLORORESPIRATORY REDUCTION 6, chloroplastic isoform X1 OS=Cucurbita mos...	[more]
A0A6J1C097	3.9e-121	86.22	protein CHLORORESPIRATORY REDUCTION 6, chloroplastic OS=Momordica charantia OX=3...	[more]

BLAST of PI0019280 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011655753.1	2.6e-135	95.67	protein CHLORORESPIRATORY REDUCTION 6, chloroplastic [Cucumis sativus] >KGN65205...	[more]
XP_008443914.1	3.3e-135	96.46	PREDICTED: protein CHLORORESPIRATORY REDUCTION 6, chloroplastic [Cucumis melo]	[more]
XP_038876902.1	3.1e-133	94.09	protein CHLORORESPIRATORY REDUCTION 6, chloroplastic [Benincasa hispida]	[more]
XP_022987841.1	4.7e-129	91.73	protein CHLORORESPIRATORY REDUCTION 6, chloroplastic isoform X1 [Cucurbita maxim...	[more]
XP_022921932.1	8.0e-129	92.13	protein CHLORORESPIRATORY REDUCTION 6, chloroplastic isoform X1 [Cucurbita mosch...	[more]

BLAST of PI0019280 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G47910.1	8.0e-87	72.46	chlororespiratory reduction 6	[more]
AT2G47910.2	1.4e-78	75.56	chlororespiratory reduction 6	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR014946	Protein chlororespiratory reduction 6	PFAM	PF08847	Crr6	coord: 92..245 e-value: 1.2E-58 score: 197.0
IPR014946	Protein chlororespiratory reduction 6	PANTHER	PTHR35724	PROTEIN CHLORORESPIRATORY REDUCTION 6, CHLOROPLASTIC	coord: 5..252
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..50
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 64..86

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0019280.1	PI0019280.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010275	NAD(P)H dehydrogenase complex assembly
cellular_component	GO:0009507	chloroplast