PI0019263 (gene) Melon (PI 482460) v1

Overview


Name	PI0019263
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	50S ribosomal protein-like protein
Location	chr03: 25749470 .. 25750714 (+)
RNA-Seq Expression	PI0019263
Synteny	PI0019263

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAAGAAAAAAGGATCCAAAATTCACATCACACACTTCTTCTTCTCACTTCTCATCCCTAATTCATTCAGATTCTTCAGATCTCTCTCTCTCTCTCTAATACAATCTCCTCAATTTCTTATTCCAATTTTCAGTTTTACACAACACAAAGTAAGCAACGAATCTCTCAAATCTCATTCTCCCATGGCTACTTTGCATAAATTCAAGCTCTTAGCCTCTCAATGTGCCGTCGCTGGTAGCCCTACTCGAAGCCCCAACGCTAGTCCCCTCATTCATCTCCGTCGTCGCCGCCGTAAAACCCTAAGAATGCTCCTTAATCGCACCGATCGCCGCCGATTTCCCTTCCAAGATAACTCCGCCGATTCCCAAGATCTCGACGACGACGACGACGACGATAACCACAATTTGATCCCGGAGAAAAACGAGAAGGAGGTTCGAGCCAGACGGAAACTCAAGGATTTGTTCGTCTCGTCGCCGCCGCCACTTGAGGATAGGGTTTCCGATAGGAGAATCGAAGAACAGGAGGGATTCGTAACGTCGGCCAACACTAACGCCGCTGGAATCGGTTCGCCATCTACCACTCGCCGCTCTCTTAGACCTGTATCGGCAACATTTCGGTACAGATTTCTCCGGCGAGCTTGGCGGCCGGTGCTCGTTGCCATTCCCGAGTAGAAGATGCTCCTCTCCGGTAAAATCTGTACGAAGAAATTCCATAATTTTTGCCTTAATTATTATTTTTTAAATTTTCATAACATTTTTTCCCTAATAAATTCCGACGAGTCGTCTAGCAGTGGGGAGGAGTAAGACGTGACCAATGTAAATACAAAAAGTTAAAATTAAAAATTACCAATGTTAATTATAATTAAAAGTTAAAAAATATAAAATGAGTTATTATTATTATTATAAAAAAAAAGTAATTAAAAATTGGCGCCGTATTTTTGATAATGTGCGCCGTAGTTGCGAAAGGACGTAACGGCCACGCGACGTTGACAGGTGACCAATCCGTTAACGGAAAATGAATATTTTCATCGATTTAAAACAAAACAAAACGGTTAGCGTTAAATCTTAATTCAATAATGGTAATAATGAATTAATGGAAAAGATTTGTTTTGGGAGTGAGGTAAAAAATTGTAATTTAGCGGTTAATTAATTAATTAATGTGTGTAATTAAAATTATTATTGTTGGTGTAGAGATTTTGAATTTAATTAATGTTCCCACGTGTGTTGTTTAGAAGTGAGATGAGGA

mRNA sequence

AAAAGAAAAAAGGATCCAAAATTCACATCACACACTTCTTCTTCTCACTTCTCATCCCTAATTCATTCAGATTCTTCAGATCTCTCTCTCTCTCTCTAATACAATCTCCTCAATTTCTTATTCCAATTTTCAGTTTTACACAACACAAAGTAAGCAACGAATCTCTCAAATCTCATTCTCCCATGGCTACTTTGCATAAATTCAAGCTCTTAGCCTCTCAATGTGCCGTCGCTGGTAGCCCTACTCGAAGCCCCAACGCTAGTCCCCTCATTCATCTCCGTCGTCGCCGCCGTAAAACCCTAAGAATGCTCCTTAATCGCACCGATCGCCGCCGATTTCCCTTCCAAGATAACTCCGCCGATTCCCAAGATCTCGACGACGACGACGACGACGATAACCACAATTTGATCCCGGAGAAAAACGAGAAGGAGGTTCGAGCCAGACGGAAACTCAAGGATTTGTTCGTCTCGTCGCCGCCGCCACTTGAGGATAGGGTTTCCGATAGGAGAATCGAAGAACAGGAGGGATTCGTAACGTCGGCCAACACTAACGCCGCTGGAATCGGTTCGCCATCTACCACTCGCCGCTCTCTTAGACCTGTATCGGCAACATTTCGGTACAGATTTCTCCGGCGAGCTTGGCGGCCGGTGCTCGTTGCCATTCCCGAGTAGAAGATGCTCCTCTCCGGTAAAATCTGTACGAAGAAATTCCATAATTTTTGCCTTAATTATTATTTTTTAAATTTTCATAACATTTTTTCCCTAATAAATTCCGACGAGTCGTCTAGCAGTGGGGAGGAGTAAGACGTGACCAATGTAAATACAAAAAGTTAAAATTAAAAATTACCAATGTTAATTATAATTAAAAGTTAAAAAATATAAAATGAGTTATTATTATTATTATAAAAAAAAAGTAATTAAAAATTGGCGCCGTATTTTTGATAATGTGCGCCGTAGTTGCGAAAGGACGTAACGGCCACGCGACGTTGACAGGTGACCAATCCGTTAACGGAAAATGAATATTTTCATCGATTTAAAACAAAACAAAACGGTTAGCGTTAAATCTTAATTCAATAATGGTAATAATGAATTAATGGAAAAGATTTGTTTTGGGAGTGAGGTAAAAAATTGTAATTTAGCGGTTAATTAATTAATTAATGTGTGTAATTAAAATTATTATTGTTGGTGTAGAGATTTTGAATTTAATTAATGTTCCCACGTGTGTTGTTTAGAAGTGAGATGAGGA

Coding sequence (CDS)

ATGGCTACTTTGCATAAATTCAAGCTCTTAGCCTCTCAATGTGCCGTCGCTGGTAGCCCTACTCGAAGCCCCAACGCTAGTCCCCTCATTCATCTCCGTCGTCGCCGCCGTAAAACCCTAAGAATGCTCCTTAATCGCACCGATCGCCGCCGATTTCCCTTCCAAGATAACTCCGCCGATTCCCAAGATCTCGACGACGACGACGACGACGATAACCACAATTTGATCCCGGAGAAAAACGAGAAGGAGGTTCGAGCCAGACGGAAACTCAAGGATTTGTTCGTCTCGTCGCCGCCGCCACTTGAGGATAGGGTTTCCGATAGGAGAATCGAAGAACAGGAGGGATTCGTAACGTCGGCCAACACTAACGCCGCTGGAATCGGTTCGCCATCTACCACTCGCCGCTCTCTTAGACCTGTATCGGCAACATTTCGGTACAGATTTCTCCGGCGAGCTTGGCGGCCGGTGCTCGTTGCCATTCCCGAGTAG

Protein sequence

MATLHKFKLLASQCAVAGSPTRSPNASPLIHLRRRRRKTLRMLLNRTDRRRFPFQDNSADSQDLDDDDDDDNHNLIPEKNEKEVRARRKLKDLFVSSPPPLEDRVSDRRIEEQEGFVTSANTNAAGIGSPSTTRRSLRPVSATFRYRFLRRAWRPVLVAIPE

Homology

[Close]

BLAST of PI0019263 vs. ExPASy TrEMBL
Match: A0A5D3C5R9 (Protein PCF11-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold453G001740 PE=4 SV=1)

HSP 1 Score: 306.6 bits (784), Expect = 6.2e-80
Identity = 160/162 (98.77%), Postives = 161/162 (99.38%), Query Frame = 0


Query: 1   MATLHKFKLLASQCAVAGSPTRSPNASPLIHLRRRRRKTLRMLLNRTDRRRFPFQDNSAD 60
           MATLHKFKLLASQCAVAGSPTRSPNASPLIHLRRRRRKTLRMLLNRTDRRRFPFQDNSAD
Sbjct: 1   MATLHKFKLLASQCAVAGSPTRSPNASPLIHLRRRRRKTLRMLLNRTDRRRFPFQDNSAD 60

Query: 61  SQDLDDDDDDDNHNLIPEKNEKEVRARRKLKDLFVSSPPPLEDRVSDRRIEEQEGFVTSA 120
           SQDLDDDDDDDNHNLIPEKNEKEVRARRKLKDLFVSSPPPLEDR+SDRRIEEQE FVTSA
Sbjct: 61  SQDLDDDDDDDNHNLIPEKNEKEVRARRKLKDLFVSSPPPLEDRLSDRRIEEQEEFVTSA 120

Query: 121 NTNAAGIGSPSTTRRSLRPVSATFRYRFLRRAWRPVLVAIPE 163
           NTNAAGIGSPSTTRRSLRPVSATFRYRFLRRAWRPVLVAIPE
Sbjct: 121 NTNAAGIGSPSTTRRSLRPVSATFRYRFLRRAWRPVLVAIPE 162

[Close]

BLAST of PI0019263 vs. ExPASy TrEMBL
Match: A0A1S3B320 (uncharacterized protein LOC103485443 OS=Cucumis melo OX=3656 GN=LOC103485443 PE=4 SV=1)

HSP 1 Score: 306.6 bits (784), Expect = 6.2e-80
Identity = 160/162 (98.77%), Postives = 161/162 (99.38%), Query Frame = 0


Query: 1   MATLHKFKLLASQCAVAGSPTRSPNASPLIHLRRRRRKTLRMLLNRTDRRRFPFQDNSAD 60
           MATLHKFKLLASQCAVAGSPTRSPNASPLIHLRRRRRKTLRMLLNRTDRRRFPFQDNSAD
Sbjct: 1   MATLHKFKLLASQCAVAGSPTRSPNASPLIHLRRRRRKTLRMLLNRTDRRRFPFQDNSAD 60

Query: 61  SQDLDDDDDDDNHNLIPEKNEKEVRARRKLKDLFVSSPPPLEDRVSDRRIEEQEGFVTSA 120
           SQDLDDDDDDDNHNLIPEKNEKEVRARRKLKDLFVSSPPPLEDR+SDRRIEEQE FVTSA
Sbjct: 61  SQDLDDDDDDDNHNLIPEKNEKEVRARRKLKDLFVSSPPPLEDRLSDRRIEEQEEFVTSA 120

Query: 121 NTNAAGIGSPSTTRRSLRPVSATFRYRFLRRAWRPVLVAIPE 163
           NTNAAGIGSPSTTRRSLRPVSATFRYRFLRRAWRPVLVAIPE
Sbjct: 121 NTNAAGIGSPSTTRRSLRPVSATFRYRFLRRAWRPVLVAIPE 162

[Close]

BLAST of PI0019263 vs. ExPASy TrEMBL
Match: A0A0A0LQR3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G404840 PE=4 SV=1)

HSP 1 Score: 292.0 bits (746), Expect = 1.6e-75
Identity = 155/164 (94.51%), Postives = 157/164 (95.73%), Query Frame = 0


Query: 1   MATLHKFKLLASQCAVAGSPTRSPNASPLIHLRRRRRKTLRMLLNRTDRRRFPFQDNSAD 60
           MATLHKFKLLASQCAVAGSPTRSPNASPLIHLRRRRRKTLRMLLNRTDRRRFPFQDNSAD
Sbjct: 1   MATLHKFKLLASQCAVAGSPTRSPNASPLIHLRRRRRKTLRMLLNRTDRRRFPFQDNSAD 60

Query: 61  SQDLD--DDDDDDNHNLIPEKNEKEVRARRKLKDLFVSSPPPLEDRVSDRRIEEQEGFVT 120
           SQDLD  D D DDNHNLIPEKNEKEVRARRKLKDLFVSSPPPLEDR+SDRRIEEQE F+T
Sbjct: 61  SQDLDDHDHDHDDNHNLIPEKNEKEVRARRKLKDLFVSSPPPLEDRLSDRRIEEQEAFLT 120

Query: 121 SANTNAAGIGSPSTTRRSLRPVSATFRYRFLRRAWRPVLVAIPE 163
           S NTNAAGI SPSTTRRSLRPVSATFRYRFLRRAWRPVLVAIPE
Sbjct: 121 STNTNAAGISSPSTTRRSLRPVSATFRYRFLRRAWRPVLVAIPE 164

[Close]

BLAST of PI0019263 vs. ExPASy TrEMBL
Match: A0A6J1JYC4 (uncharacterized protein LOC111489414 OS=Cucurbita maxima OX=3661 GN=LOC111489414 PE=4 SV=1)

HSP 1 Score: 264.2 bits (674), Expect = 3.5e-67
Identity = 139/162 (85.80%), Postives = 152/162 (93.83%), Query Frame = 0


Query: 1   MATLHKFKLLASQCAVAGSPTRSPNASPLIHLRRRRRKTLRMLLNRTDRRRFPFQDNSAD 60
           MATLHKFKLLASQCAVAG PT+SP ASP+ HLRRRRRKTLRMLLNRTDRRRFP+QDNSAD
Sbjct: 1   MATLHKFKLLASQCAVAGCPTQSPTASPVFHLRRRRRKTLRMLLNRTDRRRFPYQDNSAD 60

Query: 61  SQDLDDDDDDDNHNLIPEKNEKEVRARRKLKDLFVSSPPPLEDRVSDRRIEEQEGFVTSA 120
            QD+DDDDDDD+ N+IPEKN+KEVRARRKLKDLFVSS PPLED+VSDRRIEEQE  +T+A
Sbjct: 61  PQDVDDDDDDDD-NMIPEKNDKEVRARRKLKDLFVSS-PPLEDKVSDRRIEEQEALLTTA 120

Query: 121 NTNAAGIGSPSTTRRSLRPVSATFRYRFLRRAWRPVLVAIPE 163
           NT+AAGIG+PS TRRSLRP+SATFRYRFLRRAWRPVLV IPE
Sbjct: 121 NTSAAGIGTPSITRRSLRPISATFRYRFLRRAWRPVLVTIPE 160

[Close]

BLAST of PI0019263 vs. ExPASy TrEMBL
Match: A0A6J1FG66 (uncharacterized protein LOC111445119 OS=Cucurbita moschata OX=3662 GN=LOC111445119 PE=4 SV=1)

HSP 1 Score: 262.3 bits (669), Expect = 1.3e-66
Identity = 138/162 (85.19%), Postives = 151/162 (93.21%), Query Frame = 0


Query: 1   MATLHKFKLLASQCAVAGSPTRSPNASPLIHLRRRRRKTLRMLLNRTDRRRFPFQDNSAD 60
           MATLHKFKLLASQCAVAG PT+SP ASP+ HLRRRRRKTLRMLLNR DRRRFP+QDNSAD
Sbjct: 1   MATLHKFKLLASQCAVAGCPTQSPTASPVFHLRRRRRKTLRMLLNRADRRRFPYQDNSAD 60

Query: 61  SQDLDDDDDDDNHNLIPEKNEKEVRARRKLKDLFVSSPPPLEDRVSDRRIEEQEGFVTSA 120
            QD+DDDDDDD+ N+IPEKN+KEVRARRKLKDLFVSS PPLED+VSDRRIEEQE  +T+A
Sbjct: 61  PQDVDDDDDDDD-NMIPEKNDKEVRARRKLKDLFVSS-PPLEDKVSDRRIEEQEALLTTA 120

Query: 121 NTNAAGIGSPSTTRRSLRPVSATFRYRFLRRAWRPVLVAIPE 163
           NT+AAGIG+PS TRRSLRP+SATFRYRFLRRAWRPVLV IPE
Sbjct: 121 NTSAAGIGTPSITRRSLRPISATFRYRFLRRAWRPVLVTIPE 160

[Close]

BLAST of PI0019263 vs. NCBI nr
Match: XP_008441261.1 (PREDICTED: uncharacterized protein LOC103485443 [Cucumis melo] >TYK06680.1 protein PCF11-like [Cucumis melo var. makuwa])

HSP 1 Score: 306.6 bits (784), Expect = 1.3e-79
Identity = 160/162 (98.77%), Postives = 161/162 (99.38%), Query Frame = 0


Query: 1   MATLHKFKLLASQCAVAGSPTRSPNASPLIHLRRRRRKTLRMLLNRTDRRRFPFQDNSAD 60
           MATLHKFKLLASQCAVAGSPTRSPNASPLIHLRRRRRKTLRMLLNRTDRRRFPFQDNSAD
Sbjct: 1   MATLHKFKLLASQCAVAGSPTRSPNASPLIHLRRRRRKTLRMLLNRTDRRRFPFQDNSAD 60

Query: 61  SQDLDDDDDDDNHNLIPEKNEKEVRARRKLKDLFVSSPPPLEDRVSDRRIEEQEGFVTSA 120
           SQDLDDDDDDDNHNLIPEKNEKEVRARRKLKDLFVSSPPPLEDR+SDRRIEEQE FVTSA
Sbjct: 61  SQDLDDDDDDDNHNLIPEKNEKEVRARRKLKDLFVSSPPPLEDRLSDRRIEEQEEFVTSA 120

Query: 121 NTNAAGIGSPSTTRRSLRPVSATFRYRFLRRAWRPVLVAIPE 163
           NTNAAGIGSPSTTRRSLRPVSATFRYRFLRRAWRPVLVAIPE
Sbjct: 121 NTNAAGIGSPSTTRRSLRPVSATFRYRFLRRAWRPVLVAIPE 162

[Close]

BLAST of PI0019263 vs. NCBI nr
Match: XP_004138634.1 (uncharacterized protein LOC101215025 [Cucumis sativus] >KGN63132.1 hypothetical protein Csa_021809 [Cucumis sativus])

HSP 1 Score: 292.0 bits (746), Expect = 3.2e-75
Identity = 155/164 (94.51%), Postives = 157/164 (95.73%), Query Frame = 0


Query: 1   MATLHKFKLLASQCAVAGSPTRSPNASPLIHLRRRRRKTLRMLLNRTDRRRFPFQDNSAD 60
           MATLHKFKLLASQCAVAGSPTRSPNASPLIHLRRRRRKTLRMLLNRTDRRRFPFQDNSAD
Sbjct: 1   MATLHKFKLLASQCAVAGSPTRSPNASPLIHLRRRRRKTLRMLLNRTDRRRFPFQDNSAD 60

Query: 61  SQDLD--DDDDDDNHNLIPEKNEKEVRARRKLKDLFVSSPPPLEDRVSDRRIEEQEGFVT 120
           SQDLD  D D DDNHNLIPEKNEKEVRARRKLKDLFVSSPPPLEDR+SDRRIEEQE F+T
Sbjct: 61  SQDLDDHDHDHDDNHNLIPEKNEKEVRARRKLKDLFVSSPPPLEDRLSDRRIEEQEAFLT 120

Query: 121 SANTNAAGIGSPSTTRRSLRPVSATFRYRFLRRAWRPVLVAIPE 163
           S NTNAAGI SPSTTRRSLRPVSATFRYRFLRRAWRPVLVAIPE
Sbjct: 121 STNTNAAGISSPSTTRRSLRPVSATFRYRFLRRAWRPVLVAIPE 164

[Close]

BLAST of PI0019263 vs. NCBI nr
Match: XP_038885993.1 (uncharacterized protein LOC120076298 [Benincasa hispida])

HSP 1 Score: 277.3 bits (708), Expect = 8.3e-71
Identity = 147/162 (90.74%), Postives = 158/162 (97.53%), Query Frame = 0


Query: 1   MATLHKFKLLASQCAVAGSPTRSPNASPLIHLRRRRRKTLRMLLNRTDRRRFPFQDNSAD 60
           MATLHKFKLLASQCAVAGSPTRSPNASP+IHLRRRRRKTLRMLLNRTDRRRFP+QDNSAD
Sbjct: 1   MATLHKFKLLASQCAVAGSPTRSPNASPVIHLRRRRRKTLRMLLNRTDRRRFPYQDNSAD 60

Query: 61  SQDLDDDDDDDNHNLIPEKNEKEVRARRKLKDLFVSSPPPLEDRVSDRRIEEQEGFVTSA 120
           SQD+DDDDDD +  +IPEKNEKEVRARRKLKDLFVSS PPLED+VSDRRIEE+EGF+T+A
Sbjct: 61  SQDVDDDDDDSD-LMIPEKNEKEVRARRKLKDLFVSS-PPLEDKVSDRRIEEEEGFLTAA 120

Query: 121 NTNAAGIGSPSTTRRSLRPVSATFRYRFLRRAWRPVLVAIPE 163
           NT+AAGIGSPSTTRRSLRP+SATFRYRFLRRAWRPVLVAIPE
Sbjct: 121 NTSAAGIGSPSTTRRSLRPISATFRYRFLRRAWRPVLVAIPE 160

[Close]

BLAST of PI0019263 vs. NCBI nr
Match: XP_022993370.1 (uncharacterized protein LOC111489414 [Cucurbita maxima])

HSP 1 Score: 264.2 bits (674), Expect = 7.2e-67
Identity = 139/162 (85.80%), Postives = 152/162 (93.83%), Query Frame = 0


Query: 1   MATLHKFKLLASQCAVAGSPTRSPNASPLIHLRRRRRKTLRMLLNRTDRRRFPFQDNSAD 60
           MATLHKFKLLASQCAVAG PT+SP ASP+ HLRRRRRKTLRMLLNRTDRRRFP+QDNSAD
Sbjct: 1   MATLHKFKLLASQCAVAGCPTQSPTASPVFHLRRRRRKTLRMLLNRTDRRRFPYQDNSAD 60

Query: 61  SQDLDDDDDDDNHNLIPEKNEKEVRARRKLKDLFVSSPPPLEDRVSDRRIEEQEGFVTSA 120
            QD+DDDDDDD+ N+IPEKN+KEVRARRKLKDLFVSS PPLED+VSDRRIEEQE  +T+A
Sbjct: 61  PQDVDDDDDDDD-NMIPEKNDKEVRARRKLKDLFVSS-PPLEDKVSDRRIEEQEALLTTA 120

Query: 121 NTNAAGIGSPSTTRRSLRPVSATFRYRFLRRAWRPVLVAIPE 163
           NT+AAGIG+PS TRRSLRP+SATFRYRFLRRAWRPVLV IPE
Sbjct: 121 NTSAAGIGTPSITRRSLRPISATFRYRFLRRAWRPVLVTIPE 160

[Close]

BLAST of PI0019263 vs. NCBI nr
Match: XP_022939119.1 (uncharacterized protein LOC111445119 [Cucurbita moschata] >KAG7015924.1 hypothetical protein SDJN02_21028, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 262.3 bits (669), Expect = 2.7e-66
Identity = 138/162 (85.19%), Postives = 151/162 (93.21%), Query Frame = 0


Query: 1   MATLHKFKLLASQCAVAGSPTRSPNASPLIHLRRRRRKTLRMLLNRTDRRRFPFQDNSAD 60
           MATLHKFKLLASQCAVAG PT+SP ASP+ HLRRRRRKTLRMLLNR DRRRFP+QDNSAD
Sbjct: 1   MATLHKFKLLASQCAVAGCPTQSPTASPVFHLRRRRRKTLRMLLNRADRRRFPYQDNSAD 60

Query: 61  SQDLDDDDDDDNHNLIPEKNEKEVRARRKLKDLFVSSPPPLEDRVSDRRIEEQEGFVTSA 120
            QD+DDDDDDD+ N+IPEKN+KEVRARRKLKDLFVSS PPLED+VSDRRIEEQE  +T+A
Sbjct: 61  PQDVDDDDDDDD-NMIPEKNDKEVRARRKLKDLFVSS-PPLEDKVSDRRIEEQEALLTTA 120

Query: 121 NTNAAGIGSPSTTRRSLRPVSATFRYRFLRRAWRPVLVAIPE 163
           NT+AAGIG+PS TRRSLRP+SATFRYRFLRRAWRPVLV IPE
Sbjct: 121 NTSAAGIGTPSITRRSLRPISATFRYRFLRRAWRPVLVTIPE 160

[Close]

BLAST of PI0019263 vs. TAIR 10
Match: AT1G66890.1 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: 50S ribosomal protein-related (TAIR:AT5G16200.1); Has 36 Blast hits to 36 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 36; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 94.0 bits (232), Expect = 1.2e-19
Identity = 77/175 (44.00%), Postives = 97/175 (55.43%), Query Frame = 0


Query: 3   TLHKFKLLASQCA-VAGSPTRSPNASPLIHLRRRRRKTLRMLLNR-TDRRRFPFQDNSAD 62
           +L KFKLLA+ C+ VA SPTR    SP+IHL  RRRKTLR+LL R +DR R P   N+ D
Sbjct: 2   SLQKFKLLATHCSTVAESPTR----SPVIHL--RRRKTLRLLLTRSSDRWRLPEIQNNVD 61

Query: 63  SQDLDDDDDDDNHNLIPEKNEKEVRARRKLKDLFVSSPPPLE-------DRVSDRRIEEQ 122
                D                ++R+ RKL DLFVSSPP  E       D+ +   +E +
Sbjct: 62  ESKKTD-------------KRGKIRSSRKLGDLFVSSPPFEESGGGGGGDKGTKMEVEME 121

Query: 123 EGFVTSANTNAAGIGSPSTTRR-----SLRPVSA-TFRYRFLRRAWRPVLVAIPE 163
                +  +N AG G   T RR     S+RP+S+ T R R LRR+WRPVLV IPE
Sbjct: 122 RDVPVNGVSNNAGFGEEITARRVGFNGSVRPMSSVTLRCRLLRRSWRPVLVTIPE 157

[Close]

BLAST of PI0019263 vs. TAIR 10
Match: AT5G16200.1 (50S ribosomal protein-related )

HSP 1 Score: 81.3 bits (199), Expect = 8.1e-16
Identity = 66/169 (39.05%), Postives = 93/169 (55.03%), Query Frame = 0


Query: 1   MATLHKFKLLAS----QCAVAGSPTRSPNASPLIHLRRRRRKTLRMLLNR-TDRRRFPFQ 60
           ++ LHKFKL A+    + + AGSPT SP  SP+ +L  RRRKTLRML ++ +D RR   +
Sbjct: 3   LSRLHKFKLFAAHRSLEASTAGSPTMSPTKSPVFNL--RRRKTLRMLFDKSSDSRRRNLR 62

Query: 61  DNSADSQDLDDDDDDDNHNLIPEKNEKEVRARRKLKDLFVSSP-PPLEDRVSDRRIEEQE 120
               +S + D +  +       +K       RRKL++L V+SP PP + R     I E+ 
Sbjct: 63  QILEESPESDGNSGN-------KKRGNHRATRRKLRELLVTSPSPPYKGREDIDGIGEER 122

Query: 121 GFVTSANTNAAGIGSPSTTRRSLRPVSA-TFRYRFLRRAWRPVLVAIPE 163
             ++  N  + G G   T RR     S  +FR R LR+ WRPVLV+IPE
Sbjct: 123 SEISPLNVTSNGDGRELTARRFGSSGSVQSFRLRILRKPWRPVLVSIPE 162

[Close]

BLAST of PI0019263 vs. TAIR 10
Match: AT1G68430.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G66890.1); Has 35 Blast hits to 35 proteins in 6 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 35; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 63.5 bits (153), Expect = 1.7e-10
Identity = 64/169 (37.87%), Postives = 81/169 (47.93%), Query Frame = 0


Query: 1   MATLHKFKLLASQCAVAG-SPTRSPN--ASPLIHLRRRRRKTLRMLLNRTDRRRFPFQDN 60
           MATL +FK L +QC VA  SPTRSP+   SPL+ L RR++ TL+MLL+     R   Q  
Sbjct: 1   MATLQRFKFLGTQCGVAAQSPTRSPSPRTSPLVQL-RRKKTTLKMLLSLASPSRREQQP- 60

Query: 61  SADSQDLDDDDDDDNHNLIPEKNEKEVRARRKLKDLFVSSPPPLEDRVSDRR----IEEQ 120
                             +   + K+V A RKLKDLFVSS    E++  D R     +E+
Sbjct: 61  ------------------LIHHHHKDV-AGRKLKDLFVSSSSAEEEQEEDERPKGKTKEE 120

Query: 121 EGFVTSANTNAAGIGSPSTTRRSLRPVSATFRYRFLRRAWRPVLVAIPE 163
                +A  NAA             PV   F  R L+RAWRP L  I E
Sbjct: 121 VLAAMAAKLNAA--SRLQCESADAAPVWFGFSKRLLQRAWRPKLGTIHE 146

The following BLAST results are available for this feature:

BLAST of PI0019263 vs.


Match Name	E-value	Identity	Description

BLAST of PI0019263 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3C5R9	6.2e-80	98.77	Protein PCF11-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold453G0...	[more]
A0A1S3B320	6.2e-80	98.77	uncharacterized protein LOC103485443 OS=Cucumis melo OX=3656 GN=LOC103485443 PE=...	[more]
A0A0A0LQR3	1.6e-75	94.51	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G404840 PE=4 SV=1	[more]
A0A6J1JYC4	3.5e-67	85.80	uncharacterized protein LOC111489414 OS=Cucurbita maxima OX=3661 GN=LOC111489414...	[more]
A0A6J1FG66	1.3e-66	85.19	uncharacterized protein LOC111445119 OS=Cucurbita moschata OX=3662 GN=LOC1114451...	[more]

BLAST of PI0019263 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008441261.1	1.3e-79	98.77	PREDICTED: uncharacterized protein LOC103485443 [Cucumis melo] >TYK06680.1 prote...	[more]
XP_004138634.1	3.2e-75	94.51	uncharacterized protein LOC101215025 [Cucumis sativus] >KGN63132.1 hypothetical ...	[more]
XP_038885993.1	8.3e-71	90.74	uncharacterized protein LOC120076298 [Benincasa hispida]	[more]
XP_022993370.1	7.2e-67	85.80	uncharacterized protein LOC111489414 [Cucurbita maxima]	[more]
XP_022939119.1	2.7e-66	85.19	uncharacterized protein LOC111445119 [Cucurbita moschata] >KAG7015924.1 hypothet...	[more]

BLAST of PI0019263 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G66890.1	1.2e-19	44.00	FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow...	[more]
AT5G16200.1	8.1e-16	39.05	50S ribosomal protein-related	[more]
AT1G68430.1	1.7e-10	37.87	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 51..82
None	No IPR available	PANTHER	PTHR34542	OS08G0359900 PROTEIN	coord: 1..162
None	No IPR available	PANTHER	PTHR34542:SF6	50S RIBOSOMAL-LIKE PROTEIN	coord: 1..162

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0019263.1	PI0019263.1	mRNA