PI0019208 (gene) Melon (PI 482460) v1

Overview


Name	PI0019208
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	Reverse transcriptase domain-containing protein
Location	chr02: 16135113 .. 16137834 (+)
RNA-Seq Expression	PI0019208
Synteny	PI0019208

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGTGTAGCCTTGGAACAACTCACTCAACAATTAAACCTGAGAAAGACATCATACCCAAAAAGATATCCACCAAAGTTTACACAACAACAACAACTAAAGCTTACACAAACTATACTTTTCTAAATCTTACAAGACATATACAACAAAACAAAACAGACTATAAGTACAACACCAACCACGTACTGGCAATTGATCTGGGAGCTTCCATTACCCTAAGACAGTCTATCAGGCACCAAGAGCTCGGTCTCTATCTGGGAAGTGGAAAACATTTTGAAAGGGTGAGTTATAAAGCCTAGTGAATGACTAAATTTAAAACTAGAAATCTAGAAATCAGAACTTATTATTATCTTTTAAAACATATAAATTTGTTTAACCAAAGCATTAAATGTGAACGTGTAAAGATGACAACTCCTCATATACTCAGCAAGTATTTCATTAAAATCTAGCAAGGCATATCAACTATATTAACATTTAACTAACATAACAAAAACTATGTGTAGGGCACGCCTAGTACAACCATCGTTACTAGCTTTACAATGTAGTGGGGTCCACCCAACACTCCCATCGTCTTTGTCGTAGTGGGATCCATCCAACATCACGATAGTATCATTGTCACGGAGTACACTCAACGTCAACAACGAAATCTAACCTACGTGCACACAATACCATATAGCCTCGTGCTCAACATCTCAGTCATGTAGTTAATAGAAATCTCCAAAAAGTTATATGAAAACGTTAAAACATGTCTGCTTATAAACAATATTTTCTTAAAATATTATTGTTTCAACTACTTTTCAGAGAGTCAATAATAACGTGCTCATACATAAATTTATCATTAAATCCAAGCGTGAAACTATGCCTTGAAACCGTTCGTAGAAATCAGATACTATTCGTAAAATTAGGTTCGAACATAGAAACATAATCATAGATAACAGTTTAGAAATGTGTTTGAAAATCTATTTTTGTCACTCACTGCCTTAAACTAGTTTCCTGGTGTGTAGACCTGGTCTATTTCCTCTTGGCATGTCAAACAAACCAAAACCGAGCATCAGAATCTTATATAGTTTTGTATCTTTAATACCAAACTTAAGATCATGTACAAAAGATGACATTCATCAATTCTAAATTTAAACATAAAAGAACATTTCACAGTTTTCCCCAGAATTTTCAGATTCAATAACCTAACTCCAAACCATCATAACTTTCTCAATACTTCACCAAAATTAATGTACTTTATATAAAACTCTTTCTTTTGAACTCCTTTACAACTTACTTGAAAGAAAACGAGATTCCCAACAGATTACTACAGAACTCGCTCGAAACAGAGGTAGTCCAATTTCAGGTCTTCTGCTAACCTCTGTCTTGTTCCTAAAATTAGACTATTTTCAGTCATTTTTGGCTCACGATTTCTTCATGAAACTTGTAGGAAATTTAATAAGATTTTCAACCATACCTAATAGAGCTTCTAATTCACTCTGTATGATCTGAAAAATTCAAAACAATAGAGGCTTCACGAATTTGAACACCAAATTGTGACCTAAATGCCTCTTCGAAAAAGATTACTCTAACATCAGAATTTGCTTCTGCTTTCTTCACAAAACTTGCTAGAAATTGAATAAATTTTTTAAAAAAATAAACCTTACCTTTTAATTCCTCTTGAGCAGTTCAAACTGACTAAAAAACTAGAGATGGTCTGTGTTCTCCAAACTTCTGCCATGACTGTCTCTTCTTCAAGGTTTTCTTTTTCCTCTTCAACCTCCAAACTACAAAACCTTTCTTCTTCCTCTTCTCCAAAGTCTCCCTCGAGCTGCCTCTGAATTTTATGAACCAAAAAGAAATGAAAAAAAATGGAAGAAGAAATATTGGGCAGTGGAGAAGAAGATGGAAAGAAAACAAATGCACTCTTCGTCAGTTTGGGGAGTTATCGTGGTTGATTGCTAATTTGGAGAAGAGCACTATGTTTGTGACAGGGGTTGACATTGAGGCTGCTACTGTGTTGGCGGATAGTATAGGGTTTGCGCTGGGTACTCTGCCTGTTCGTTACTTGGGTGTTCCCTTAATCTCTGGTCGGCTGCGTTCTTCGGATTGTGCTCCGCTCATCCAGCGTATTACTAGTCGGTTTTGGTCTTGGTCGGCTAGAGTTTTATCCTACGTTGGTAGACTTCAGCTTGTGCGTTCGGTGTTGCGGAGTTTTCAGGTCTTTTAGGCCAGTGTGTTTGTTTTGCTGGCGAAGGTGCATCATGAGGTTGATAGACTTTTGAGGTCGTATCTATGGAGGGGTAAGGAGGATGGGAGAGGGGGTGTGAAGGTTGCCTGGGTGGATGTGTGTCGCCCGTTTGAAGAAGGGGTCTAAATATTCGGGAGGGTAAGTCGTGGAATAGTACGTCTATCTTGAAGGTTCTTTGGTTGATGTTGACTAGTTTTGGGTCTCTGTGCGTTGCTTAGGTGGAGTTCTATATTCTAAAGGGGCGATCGTTGGGGTTTGTGGATAGTGGGGTCGGTCGGTCTTGGAGTCTTCGTGCTATTCTGAGGCATCGTGATATCTTTAGAGAGCATGTCCATATGGAGGTTGGTGATGGAAGGCGGTGTCGTATTTGGCTTGACCCTTGGCTGCATGGAGGCGCGATCATTTGGCAAATGGGTGAAAGGGTGGTGTATAATGCTGCGAGTAGTAGGGAGGCTAGGTTATCTGAGTTCATTGGCTCGGATGGTGAGTAG

mRNA sequence

ATGAAGTGTAGCCTTGGAACAACTCACTCAACAATTAAACCTGAGAAAGACATCATACCCAAAAAGATATCCACCAAAGTTTACACAACAACAACAACTAAAGCTTACACAAACTATACTTTTCTAAATCTTACAAGACATATACAACAAAACAAAACAGACTATAAGTACAACACCAACCACGTACTGGCAATTGATCTGGGAGCTTCCATTACCCTAAGACAGTCTATCAGGCACCAAGAGCTCGGTCTCTATCTGGGAAGTGGAAAACATTTTGAAAGGTGGAGAAGAAGATGGAAAGAAAACAAATGCACTCTTCGTCAGTTTGGGGAGTTATCGTGGTTGATTGCTAATTTGGAGAAGAGCACTATGTTTGTGACAGGGGTTGACATTGAGGCTGCTACTGTGTTGGCGGATAGTATAGGGTTTGCGCTGGGTACTCTGCCTGTTCGTTACTTGGGTGTTCCCTTAATCTCTGGTCGGCTGCGTTCTTCGGATTGTGCTCCGCTCATCCAGCGTATTACTAGTCGGTTTTGGTCTTGGTCGGCTAGAGTTTTATCCTACGTTGGTAGACTTCAGCTTGTGCGTTCGGTGTTGCGGAGTTTTCAGGTGGAGTTCTATATTCTAAAGGGGCGATCGTTGGGGTTTGTGGATAGTGGGGTCGGTCGGTCTTGGAGTCTTCGTGCTATTCTGAGGCATCGTGATATCTTTAGAGAGCATGTCCATATGGAGGTTGGTGATGGAAGGCGGTGTCGTATTTGGCTTGACCCTTGGCTGCATGGAGGCGCGATCATTTGGCAAATGGGTGAAAGGGTGGTGTATAATGCTGCGAGTAGTAGGGAGGCTAGGTTATCTGAGTTCATTGGCTCGGATGGTGAGTAG

Coding sequence (CDS)

ATGAAGTGTAGCCTTGGAACAACTCACTCAACAATTAAACCTGAGAAAGACATCATACCCAAAAAGATATCCACCAAAGTTTACACAACAACAACAACTAAAGCTTACACAAACTATACTTTTCTAAATCTTACAAGACATATACAACAAAACAAAACAGACTATAAGTACAACACCAACCACGTACTGGCAATTGATCTGGGAGCTTCCATTACCCTAAGACAGTCTATCAGGCACCAAGAGCTCGGTCTCTATCTGGGAAGTGGAAAACATTTTGAAAGGTGGAGAAGAAGATGGAAAGAAAACAAATGCACTCTTCGTCAGTTTGGGGAGTTATCGTGGTTGATTGCTAATTTGGAGAAGAGCACTATGTTTGTGACAGGGGTTGACATTGAGGCTGCTACTGTGTTGGCGGATAGTATAGGGTTTGCGCTGGGTACTCTGCCTGTTCGTTACTTGGGTGTTCCCTTAATCTCTGGTCGGCTGCGTTCTTCGGATTGTGCTCCGCTCATCCAGCGTATTACTAGTCGGTTTTGGTCTTGGTCGGCTAGAGTTTTATCCTACGTTGGTAGACTTCAGCTTGTGCGTTCGGTGTTGCGGAGTTTTCAGGTGGAGTTCTATATTCTAAAGGGGCGATCGTTGGGGTTTGTGGATAGTGGGGTCGGTCGGTCTTGGAGTCTTCGTGCTATTCTGAGGCATCGTGATATCTTTAGAGAGCATGTCCATATGGAGGTTGGTGATGGAAGGCGGTGTCGTATTTGGCTTGACCCTTGGCTGCATGGAGGCGCGATCATTTGGCAAATGGGTGAAAGGGTGGTGTATAATGCTGCGAGTAGTAGGGAGGCTAGGTTATCTGAGTTCATTGGCTCGGATGGTGAGTAG

Protein sequence

MKCSLGTTHSTIKPEKDIIPKKISTKVYTTTTTKAYTNYTFLNLTRHIQQNKTDYKYNTNHVLAIDLGASITLRQSIRHQELGLYLGSGKHFERWRRRWKENKCTLRQFGELSWLIANLEKSTMFVTGVDIEAATVLADSIGFALGTLPVRYLGVPLISGRLRSSDCAPLIQRITSRFWSWSARVLSYVGRLQLVRSVLRSFQVEFYILKGRSLGFVDSGVGRSWSLRAILRHRDIFREHVHMEVGDGRRCRIWLDPWLHGGAIIWQMGERVVYNAASSREARLSEFIGSDGE

Homology

[Close]

BLAST of PI0019208 vs. ExPASy TrEMBL
Match: A0A5A7TKU4 (Non-LTR retroelement reverse transcriptase-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold477G00080 PE=4 SV=1)

HSP 1 Score: 224.6 bits (571), Expect = 5.6e-55
Identity = 128/245 (52.24%), Postives = 148/245 (60.41%), Query Frame = 0


Query: 105 TLRQFGELSWLIANLEKSTMFVTGVDIEAATVLADSIGFALGTLPVRYLGVPLISGRLRS 164
           TL++FGEL  L ANL K ++FV G   E A+ LA ++GF LG LPVRYL +PL++GRLR 
Sbjct: 720 TLQKFGELLGLYANLGKISIFVAGSTNEVASRLAANMGFILGNLPVRYLSLPLLTGRLRP 779

Query: 165 SDCAPLIQRITSRFWSWSARVLSYVGRLQLVRSVLRSFQ--------------------- 224
           SDCAPLIQRITSR  SW+ARVLS+ GR QLVRSV RS Q                     
Sbjct: 780 SDCAPLIQRITSRIRSWNARVLSFAGRFQLVRSVFRSLQVYWASVFVLPSCVHNKVDKIL 839

Query: 225 -----------------------------------VEFYILKGRSLGFVDSGVGRSWSLR 284
                                              VE YILK +SL  VDSGV RSW LR
Sbjct: 840 RSYLWRVRDGPSWNITSTLKILWLLTSLSSLWVAWVEAYILKRKSLWAVDSGVCRSWCLR 899

Query: 285 AILRHRDIFREHVHMEVGDGRRCRIWLDPWLHGGAIIWQMGERVVYNAASSREARLSEFI 294
           AILR RD  + HV +EVGDG  CR+WLDPWL G  I+ Q+GERV+Y+AAS REARLSEFI
Sbjct: 900 AILRKRDSLKYHVWIEVGDGSSCRVWLDPWLQGVPILEQVGERVLYDAASRREARLSEFI 959

[Close]

BLAST of PI0019208 vs. ExPASy TrEMBL
Match: A0A5A7UP65 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold43054G00070 PE=4 SV=1)

HSP 1 Score: 221.1 bits (562), Expect = 6.1e-54
Identity = 124/238 (52.10%), Postives = 149/238 (62.61%), Query Frame = 0


Query: 107 RQFGELSWLIANLEKSTMFVTGVDIEAATVLADSIGFALGTLPVRYLGVPLISGRLRSSD 166
           ++FGELS L AN  KS++F+ GV+ E A+ LA  +GF  G LPVRYLG+PL++GRLRS+D
Sbjct: 603 KRFGELSGLFANPRKSSIFIAGVNNENASRLAACMGFVRGNLPVRYLGLPLLTGRLRSND 662

Query: 167 CAPLIQRITSRFWSWSARVLSYVGRLQLVRSVLRSFQ----------------------- 226
           C PLIQRITSR  S SARVLS+ GRLQLV SVL S Q                       
Sbjct: 663 CVPLIQRITSRIRSRSARVLSFAGRLQLVCSVLCSLQVYWAIVFVLPAYVHNEEGGLGIR 722

Query: 227 ----------------------------VEFYILKGRSLGFVDSGVGRSWSLRAILRHRD 286
                                       VE Y+LKGRSL  VDS VGRSW LRAILR ++
Sbjct: 723 DGTAWKFASTLKILWLMLTNSGSLWVAWVEAYVLKGRSLWDVDSRVGRSWCLRAILRKQE 782

Query: 287 IFREHVHMEVGDGRRCRIWLDPWLHGGAIIWQMGERVVYNAASSREARLSEFIGSDGE 294
             ++HV M+VG+G RCR+WLDPWL  GAI+ Q+GERV+Y+AAS REA LS FIG DGE
Sbjct: 783 KLKQHVRMKVGNGNRCRVWLDPWLQRGAILEQVGERVLYDAASRREASLSNFIGPDGE 840

[Close]

BLAST of PI0019208 vs. ExPASy TrEMBL
Match: A0A1S3BSI8 (uncharacterized protein LOC103493225 OS=Cucumis melo OX=3656 GN=LOC103493225 PE=4 SV=1)

HSP 1 Score: 219.9 bits (559), Expect = 1.4e-53
Identity = 123/237 (51.90%), Postives = 149/237 (62.87%), Query Frame = 0


Query: 107 RQFGELSWLIANLEKSTMFVTGVDIEAATVLADSIGFALGTLPVRYLGVPLISGRLRSSD 166
           ++FGELS L AN  KS++F+ GV+ E A+ LA  +GF  G LPVRYLG+PL++GRLRS+D
Sbjct: 537 KRFGELSGLFANPRKSSIFIAGVNNENASRLAACMGFVRGNLPVRYLGLPLLTGRLRSND 596

Query: 167 CAPLIQRITSRFWSWSARVLSYVGRLQLVRSVLRSFQ----------------------- 226
           C PLIQRITSR  S SARVLS+ GRLQLV SVL S Q                       
Sbjct: 597 CVPLIQRITSRIRSRSARVLSFAGRLQLVCSVLCSLQVYWAIVFVLPAYVHNEGGLGIRD 656

Query: 227 ---------------------------VEFYILKGRSLGFVDSGVGRSWSLRAILRHRDI 286
                                      VE Y+LKGRSL  VDS VGRSW LRAILR ++ 
Sbjct: 657 GTAWKFASTLKILWLMLTNSGSLWVAWVEAYVLKGRSLWDVDSRVGRSWCLRAILRKQEK 716

Query: 287 FREHVHMEVGDGRRCRIWLDPWLHGGAIIWQMGERVVYNAASSREARLSEFIGSDGE 294
            ++HV M+VG+G RCR+WLDPWL  GAI+ ++GERV+Y+AAS REA LS FIG DGE
Sbjct: 717 LKQHVRMKVGNGNRCRVWLDPWLQRGAILERVGERVLYDAASRREASLSNFIGPDGE 773

[Close]

BLAST of PI0019208 vs. ExPASy TrEMBL
Match: A0A5D3D7P6 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold416G00080 PE=4 SV=1)

HSP 1 Score: 219.5 bits (558), Expect = 1.8e-53
Identity = 123/238 (51.68%), Postives = 149/238 (62.61%), Query Frame = 0


Query: 107 RQFGELSWLIANLEKSTMFVTGVDIEAATVLADSIGFALGTLPVRYLGVPLISGRLRSSD 166
           ++FGELS L AN  KS++F+ GV+ E A+ LA  +GF  G LPVRYLG+PL++GRLRS+D
Sbjct: 584 KRFGELSGLFANPRKSSIFIAGVNNENASRLAACMGFVRGNLPVRYLGLPLLTGRLRSND 643

Query: 167 CAPLIQRITSRFWSWSARVLSYVGRLQLVRSVLRSFQ----------------------- 226
           C PLIQRITSR  S SARVLS+ GRLQLV SVL S Q                       
Sbjct: 644 CVPLIQRITSRIRSRSARVLSFAGRLQLVCSVLCSLQVYWAIVFVLPAYVHNEEGGLGIR 703

Query: 227 ----------------------------VEFYILKGRSLGFVDSGVGRSWSLRAILRHRD 286
                                       VE Y+LKGRSL  VDS VGRSW LRAILR ++
Sbjct: 704 DGTAWKFASTLKILWLMLTNSGSLWVAWVEAYVLKGRSLWDVDSRVGRSWCLRAILRKQE 763

Query: 287 IFREHVHMEVGDGRRCRIWLDPWLHGGAIIWQMGERVVYNAASSREARLSEFIGSDGE 294
             ++HV M+VG+G RCR+WLDPWL  GAI+ ++GERV+Y+AAS REA LS FIG DGE
Sbjct: 764 KLKQHVRMKVGNGNRCRVWLDPWLQRGAILERVGERVLYDAASRREASLSNFIGPDGE 821

[Close]

BLAST of PI0019208 vs. ExPASy TrEMBL
Match: A0A5A7V3Z0 (Reverse transcriptase domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold154G00690 PE=4 SV=1)

HSP 1 Score: 203.0 bits (515), Expect = 1.7e-48
Identity = 124/271 (45.76%), Postives = 149/271 (54.98%), Query Frame = 0


Query: 106 LRQFGELSWLIANLEKSTMFVTGVDIEAATVLADSIGFALGTLPVRYLGVPLISGRLRSS 165
           L++FGELS L AN  KS++FV GV+ E A+ LA  +GF  G L VRYLG+PL++GRLRS+
Sbjct: 469 LQKFGELSGLFANPRKSSIFVAGVNNENASHLATCMGFVRGNLSVRYLGLPLLAGRLRSN 528

Query: 166 DCAPLIQRITSRFWSWSARVLSYVGRLQLVRSVLRSFQ---------------------- 225
           D APLIQRITSR  SW+ARVLS+ GRLQLV SVLRSFQ                      
Sbjct: 529 DYAPLIQRITSRIRSWTARVLSFAGRLQLVHSVLRSFQVYWASVFVLPAYVHNEVDKILR 588

Query: 226 ------------------------------------------------------------ 285
                                                                       
Sbjct: 589 SYLWRGKEEGRGGIKVAWVDVCLPFEEGGLGIRDGPSWNIASTLKILWLMLTNSGSLWVA 648

Query: 286 -VEFYILKGRSLGFVDSGVGRSWSLRAILRHRDIFREHVHMEVGDGRRCRIWLDPWLHGG 294
            VE YILKGRSL  VDS VG+SW LRAILR R+  +  V M+VG+G   R+WLDPWL  G
Sbjct: 649 WVEAYILKGRSLWDVDSRVGKSWCLRAILRKREKLKHLVRMKVGNGNSFRVWLDPWLPEG 708

[Close]

BLAST of PI0019208 vs. NCBI nr
Match: KAA0042317.1 (non-LTR retroelement reverse transcriptase-like protein [Cucumis melo var. makuwa] >TYK15441.1 non-LTR retroelement reverse transcriptase-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 224.6 bits (571), Expect = 1.1e-54
Identity = 128/245 (52.24%), Postives = 148/245 (60.41%), Query Frame = 0


Query: 105 TLRQFGELSWLIANLEKSTMFVTGVDIEAATVLADSIGFALGTLPVRYLGVPLISGRLRS 164
           TL++FGEL  L ANL K ++FV G   E A+ LA ++GF LG LPVRYL +PL++GRLR 
Sbjct: 720 TLQKFGELLGLYANLGKISIFVAGSTNEVASRLAANMGFILGNLPVRYLSLPLLTGRLRP 779

Query: 165 SDCAPLIQRITSRFWSWSARVLSYVGRLQLVRSVLRSFQ--------------------- 224
           SDCAPLIQRITSR  SW+ARVLS+ GR QLVRSV RS Q                     
Sbjct: 780 SDCAPLIQRITSRIRSWNARVLSFAGRFQLVRSVFRSLQVYWASVFVLPSCVHNKVDKIL 839

Query: 225 -----------------------------------VEFYILKGRSLGFVDSGVGRSWSLR 284
                                              VE YILK +SL  VDSGV RSW LR
Sbjct: 840 RSYLWRVRDGPSWNITSTLKILWLLTSLSSLWVAWVEAYILKRKSLWAVDSGVCRSWCLR 899

Query: 285 AILRHRDIFREHVHMEVGDGRRCRIWLDPWLHGGAIIWQMGERVVYNAASSREARLSEFI 294
           AILR RD  + HV +EVGDG  CR+WLDPWL G  I+ Q+GERV+Y+AAS REARLSEFI
Sbjct: 900 AILRKRDSLKYHVWIEVGDGSSCRVWLDPWLQGVPILEQVGERVLYDAASRREARLSEFI 959

[Close]

BLAST of PI0019208 vs. NCBI nr
Match: KAA0057642.1 (reverse transcriptase [Cucumis melo var. makuwa])

HSP 1 Score: 221.1 bits (562), Expect = 1.3e-53
Identity = 124/238 (52.10%), Postives = 149/238 (62.61%), Query Frame = 0


Query: 107 RQFGELSWLIANLEKSTMFVTGVDIEAATVLADSIGFALGTLPVRYLGVPLISGRLRSSD 166
           ++FGELS L AN  KS++F+ GV+ E A+ LA  +GF  G LPVRYLG+PL++GRLRS+D
Sbjct: 603 KRFGELSGLFANPRKSSIFIAGVNNENASRLAACMGFVRGNLPVRYLGLPLLTGRLRSND 662

Query: 167 CAPLIQRITSRFWSWSARVLSYVGRLQLVRSVLRSFQ----------------------- 226
           C PLIQRITSR  S SARVLS+ GRLQLV SVL S Q                       
Sbjct: 663 CVPLIQRITSRIRSRSARVLSFAGRLQLVCSVLCSLQVYWAIVFVLPAYVHNEEGGLGIR 722

Query: 227 ----------------------------VEFYILKGRSLGFVDSGVGRSWSLRAILRHRD 286
                                       VE Y+LKGRSL  VDS VGRSW LRAILR ++
Sbjct: 723 DGTAWKFASTLKILWLMLTNSGSLWVAWVEAYVLKGRSLWDVDSRVGRSWCLRAILRKQE 782

Query: 287 IFREHVHMEVGDGRRCRIWLDPWLHGGAIIWQMGERVVYNAASSREARLSEFIGSDGE 294
             ++HV M+VG+G RCR+WLDPWL  GAI+ Q+GERV+Y+AAS REA LS FIG DGE
Sbjct: 783 KLKQHVRMKVGNGNRCRVWLDPWLQRGAILEQVGERVLYDAASRREASLSNFIGPDGE 840

[Close]

BLAST of PI0019208 vs. NCBI nr
Match: XP_008452126.1 (PREDICTED: uncharacterized protein LOC103493225 [Cucumis melo])

HSP 1 Score: 219.9 bits (559), Expect = 2.8e-53
Identity = 123/237 (51.90%), Postives = 149/237 (62.87%), Query Frame = 0


Query: 107 RQFGELSWLIANLEKSTMFVTGVDIEAATVLADSIGFALGTLPVRYLGVPLISGRLRSSD 166
           ++FGELS L AN  KS++F+ GV+ E A+ LA  +GF  G LPVRYLG+PL++GRLRS+D
Sbjct: 537 KRFGELSGLFANPRKSSIFIAGVNNENASRLAACMGFVRGNLPVRYLGLPLLTGRLRSND 596

Query: 167 CAPLIQRITSRFWSWSARVLSYVGRLQLVRSVLRSFQ----------------------- 226
           C PLIQRITSR  S SARVLS+ GRLQLV SVL S Q                       
Sbjct: 597 CVPLIQRITSRIRSRSARVLSFAGRLQLVCSVLCSLQVYWAIVFVLPAYVHNEGGLGIRD 656

Query: 227 ---------------------------VEFYILKGRSLGFVDSGVGRSWSLRAILRHRDI 286
                                      VE Y+LKGRSL  VDS VGRSW LRAILR ++ 
Sbjct: 657 GTAWKFASTLKILWLMLTNSGSLWVAWVEAYVLKGRSLWDVDSRVGRSWCLRAILRKQEK 716

Query: 287 FREHVHMEVGDGRRCRIWLDPWLHGGAIIWQMGERVVYNAASSREARLSEFIGSDGE 294
            ++HV M+VG+G RCR+WLDPWL  GAI+ ++GERV+Y+AAS REA LS FIG DGE
Sbjct: 717 LKQHVRMKVGNGNRCRVWLDPWLQRGAILERVGERVLYDAASRREASLSNFIGPDGE 773

[Close]

BLAST of PI0019208 vs. NCBI nr
Match: TYK19523.1 (reverse transcriptase [Cucumis melo var. makuwa])

HSP 1 Score: 219.5 bits (558), Expect = 3.7e-53
Identity = 123/238 (51.68%), Postives = 149/238 (62.61%), Query Frame = 0


Query: 107 RQFGELSWLIANLEKSTMFVTGVDIEAATVLADSIGFALGTLPVRYLGVPLISGRLRSSD 166
           ++FGELS L AN  KS++F+ GV+ E A+ LA  +GF  G LPVRYLG+PL++GRLRS+D
Sbjct: 584 KRFGELSGLFANPRKSSIFIAGVNNENASRLAACMGFVRGNLPVRYLGLPLLTGRLRSND 643

Query: 167 CAPLIQRITSRFWSWSARVLSYVGRLQLVRSVLRSFQ----------------------- 226
           C PLIQRITSR  S SARVLS+ GRLQLV SVL S Q                       
Sbjct: 644 CVPLIQRITSRIRSRSARVLSFAGRLQLVCSVLCSLQVYWAIVFVLPAYVHNEEGGLGIR 703

Query: 227 ----------------------------VEFYILKGRSLGFVDSGVGRSWSLRAILRHRD 286
                                       VE Y+LKGRSL  VDS VGRSW LRAILR ++
Sbjct: 704 DGTAWKFASTLKILWLMLTNSGSLWVAWVEAYVLKGRSLWDVDSRVGRSWCLRAILRKQE 763

Query: 287 IFREHVHMEVGDGRRCRIWLDPWLHGGAIIWQMGERVVYNAASSREARLSEFIGSDGE 294
             ++HV M+VG+G RCR+WLDPWL  GAI+ ++GERV+Y+AAS REA LS FIG DGE
Sbjct: 764 KLKQHVRMKVGNGNRCRVWLDPWLQRGAILERVGERVLYDAASRREASLSNFIGPDGE 821

[Close]

BLAST of PI0019208 vs. NCBI nr
Match: XP_031740402.1 (uncharacterized protein LOC116403409 [Cucumis sativus] >XP_031740413.1 uncharacterized protein LOC116403417 [Cucumis sativus] >XP_031745405.1 uncharacterized protein LOC116405607 [Cucumis sativus] >XP_031745422.1 uncharacterized protein LOC116405638 [Cucumis sativus] >XP_031745640.1 uncharacterized protein LOC116406072 [Cucumis sativus])

HSP 1 Score: 218.0 bits (554), Expect = 1.1e-52
Identity = 125/274 (45.62%), Postives = 153/274 (55.84%), Query Frame = 0


Query: 103 KCTLRQFGELSWLIANLEKSTMFVTGVDIEAATVLADSIGFALGTLPVRYLGVPLISGRL 162
           K T+++FGELS L ANL KS +F+ GV+   A+ LA ++GF++G LPVRYLG+PL+S RL
Sbjct: 413 KETIKRFGELSGLFANLAKSLIFLVGVNSSKASRLAANMGFSIGHLPVRYLGLPLLSRRL 472

Query: 163 RSSDCAPLIQRITSRFWSWSARVLSYVGRLQLVRSVLRSFQ------------------- 222
           RSSDC PLIQRITSR  SWSARVLS+ GRLQLVRSVLRS Q                   
Sbjct: 473 RSSDCDPLIQRITSRIRSWSARVLSFAGRLQLVRSVLRSLQVYWASVFMLPMKVHRDVDK 532

Query: 223 ------------------------------------------------------------ 282
                                                                       
Sbjct: 533 ILRAYLWRGNEEGRGGAKVAWDEVCLPFDEGGLDIRDGSSWNIASTLKILWLLLVKSGSL 592

Query: 283 ----VEFYILKGRSLGFVDSGVGRSWSLRAILRHRDIFREHVHMEVGDGRRCRIWLDPWL 294
               VE YILKGRSL  +D+GV RSW  R ILR RDI ++HV MEVG+GR+CR+WL PW+
Sbjct: 593 WVAWVESYILKGRSLLEIDAGVSRSWCFREILRKRDILKDHVKMEVGNGRKCRVWLVPWI 652

[Close]

BLAST of PI0019208 vs. TAIR 10
Match: AT3G24255.1 (RNA-directed DNA polymerase (reverse transcriptase)-related family protein )

HSP 1 Score: 70.1 bits (170), Expect = 3.4e-12
Identity = 34/76 (44.74%), Postives = 49/76 (64.47%), Query Frame = 0


Query: 126 VTGVDIEAATVLADSIGFALGTLPVRYLGVPLISGRLRSSDCAPLIQRITSRFWSWSARV 185
           + GV       +  S  FA G LPVRYLG+PL++ ++ +SD  PL+++I  R   W+AR 
Sbjct: 1   MAGVKDNDKADILHSFPFASGALPVRYLGLPLLTKKMTTSDYGPLVEKIRVRIGKWTARH 60

Query: 186 LSYVGRLQLVRSVLRS 202
           LS+ GRLQL+ SV+ S
Sbjct: 61  LSFAGRLQLISSVIHS 76

The following BLAST results are available for this feature:

BLAST of PI0019208 vs.


Match Name	E-value	Identity	Description

BLAST of PI0019208 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TKU4	5.6e-55	52.24	Non-LTR retroelement reverse transcriptase-like protein OS=Cucumis melo var. mak...	[more]
A0A5A7UP65	6.1e-54	52.10	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold43...	[more]
A0A1S3BSI8	1.4e-53	51.90	uncharacterized protein LOC103493225 OS=Cucumis melo OX=3656 GN=LOC103493225 PE=...	[more]
A0A5D3D7P6	1.8e-53	51.68	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold41...	[more]
A0A5A7V3Z0	1.7e-48	45.76	Reverse transcriptase domain-containing protein OS=Cucumis melo var. makuwa OX=1...	[more]

BLAST of PI0019208 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0042317.1	1.1e-54	52.24	non-LTR retroelement reverse transcriptase-like protein [Cucumis melo var. makuw...	[more]
KAA0057642.1	1.3e-53	52.10	reverse transcriptase [Cucumis melo var. makuwa]	[more]
XP_008452126.1	2.8e-53	51.90	PREDICTED: uncharacterized protein LOC103493225 [Cucumis melo]	[more]
TYK19523.1	3.7e-53	51.68	reverse transcriptase [Cucumis melo var. makuwa]	[more]
XP_031740402.1	1.1e-52	45.62	uncharacterized protein LOC116403409 [Cucumis sativus] >XP_031740413.1 uncharact...	[more]

BLAST of PI0019208 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G24255.1	3.4e-12	44.74	RNA-directed DNA polymerase (reverse transcriptase)-related family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33116:SF20	RNA-DIRECTED DNA POLYMERASE (REVERSE TRANSCRIPTASE)-RELATED FAMILY PROTEIN	coord: 98..204
None	No IPR available	PANTHER	PTHR33116	REVERSE TRANSCRIPTASE ZINC-BINDING DOMAIN-CONTAINING PROTEIN-RELATED-RELATED	coord: 98..204

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0019208.1	PI0019208.1	mRNA