PI0019045 (gene) Melon (PI 482460) v1

Overview


Name	PI0019045
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	RING-type E3 ubiquitin transferase
Location	chr09: 879711 .. 880648 (-)
RNA-Seq Expression	PI0019045
Synteny	PI0019045

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTCAATTCCTTTCTTTAGAACTGAAGAGAGAGAGAAAATGCGGCCAACTCCTTTAGACGCCGACGACACCATCCGCTTTCAACCACCGCCATCGCCTCCGTGCCACGACCTCCGCGCCTGTACTTGGCGGCCGTACTCCAATTCCAGAGACTTCGAAGCCAACGCCGCCGTCGTCGTCATCATCCTCCTCTGTGGCCTCATCTGCGCTCTCGCTCTCAACACCGCCATCCGCTGCTTCCTCCGCCGTCGGGGCACTTCCGACGATGATTCGAGTGATAGCCGGCAGGAGGAACTTCAAGAGGAGACGAAGCCGACGCTAGTGGACAAATTGAAGATGGCTCCGGCGCTGGTGTTCTCGGCGGAAATGAAGCCGAAACTCGCCGGTGCGGAAGCAGAGTGTACGATTTGCTTGACAGAGTTCTCGGAAGGGGAAGAGATTCGAGTATTGGCGATTTGTAAGCACGGATTTCATGTTCAGTGTATTCAAACGTGGTTGATTTCACATTCTTCTTGTCCAACTTGCCGCCGTAGTTACCTCCCTCCCTCGCCGTCATCCTCTGTTAGCGGCGCCGACGGAAACCCCTGAGATTAGATTAGAAATACCGGAATTTCTTCGGATAGCCGCCGTCGTTGCTGTTTGATAGCAGCTCGGATTGAGCATTTGCTTTTTTATTTTTATTTTTTAAATTACAATTTAACATCTACTTCTTCCTCTTTCCCTTTTCCTCCCTTGCTCTCCAACTTTTCCGATCAACTAAAACAAATGAATTCGATTAACGGGGTTTTATAAATCCGTTAATGCAATATCCGGTTGAGAAAATGAGGTTTTAGGTAATTTAGTATACTTAATCTCCAAAATTTTAAAAAATAGTAAGTTATTTTTAATAATAATTACGTGTATATAAACATCAAGTGACCAAAATAAAATTAAAAAAATC

mRNA sequence

CTCAATTCCTTTCTTTAGAACTGAAGAGAGAGAGAAAATGCGGCCAACTCCTTTAGACGCCGACGACACCATCCGCTTTCAACCACCGCCATCGCCTCCGTGCCACGACCTCCGCGCCTGTACTTGGCGGCCGTACTCCAATTCCAGAGACTTCGAAGCCAACGCCGCCGTCGTCGTCATCATCCTCCTCTGTGGCCTCATCTGCGCTCTCGCTCTCAACACCGCCATCCGCTGCTTCCTCCGCCGTCGGGGCACTTCCGACGATGATTCGAGTGATAGCCGGCAGGAGGAACTTCAAGAGGAGACGAAGCCGACGCTAGTGGACAAATTGAAGATGGCTCCGGCGCTGGTGTTCTCGGCGGAAATGAAGCCGAAACTCGCCGGTGCGGAAGCAGAGTGTACGATTTGCTTGACAGAGTTCTCGGAAGGGGAAGAGATTCGAGTATTGGCGATTTGTAAGCACGGATTTCATGTTCAGTGTATTCAAACGTGGTTGATTTCACATTCTTCTTGTCCAACTTGCCGCCGTAGTTACCTCCCTCCCTCGCCGTCATCCTCTGTTAGCGGCGCCGACGGAAACCCCTGAGATTAGATTAGAAATACCGGAATTTCTTCGGATAGCCGCCGTCGTTGCTGTTTGATAGCAGCTCGGATTGAGCATTTGCTTTTTTATTTTTATTTTTTAAATTACAATTTAACATCTACTTCTTCCTCTTTCCCTTTTCCTCCCTTGCTCTCCAACTTTTCCGATCAACTAAAACAAATGAATTCGATTAACGGGGTTTTATAAATCCGTTAATGCAATATCCGGTTGAGAAAATGAGGTTTTAGGTAATTTAGTATACTTAATCTCCAAAATTTTAAAAAATAGTAAGTTATTTTTAATAATAATTACGTGTATATAAACATCAAGTGACCAAAATAAAATTAAAAAAATC

Coding sequence (CDS)

ATGCGGCCAACTCCTTTAGACGCCGACGACACCATCCGCTTTCAACCACCGCCATCGCCTCCGTGCCACGACCTCCGCGCCTGTACTTGGCGGCCGTACTCCAATTCCAGAGACTTCGAAGCCAACGCCGCCGTCGTCGTCATCATCCTCCTCTGTGGCCTCATCTGCGCTCTCGCTCTCAACACCGCCATCCGCTGCTTCCTCCGCCGTCGGGGCACTTCCGACGATGATTCGAGTGATAGCCGGCAGGAGGAACTTCAAGAGGAGACGAAGCCGACGCTAGTGGACAAATTGAAGATGGCTCCGGCGCTGGTGTTCTCGGCGGAAATGAAGCCGAAACTCGCCGGTGCGGAAGCAGAGTGTACGATTTGCTTGACAGAGTTCTCGGAAGGGGAAGAGATTCGAGTATTGGCGATTTGTAAGCACGGATTTCATGTTCAGTGTATTCAAACGTGGTTGATTTCACATTCTTCTTGTCCAACTTGCCGCCGTAGTTACCTCCCTCCCTCGCCGTCATCCTCTGTTAGCGGCGCCGACGGAAACCCCTGA

Protein sequence

MRPTPLDADDTIRFQPPPSPPCHDLRACTWRPYSNSRDFEANAAVVVIILLCGLICALALNTAIRCFLRRRGTSDDDSSDSRQEELQEETKPTLVDKLKMAPALVFSAEMKPKLAGAEAECTICLTEFSEGEEIRVLAICKHGFHVQCIQTWLISHSSCPTCRRSYLPPSPSSSVSGADGNP

Homology

[Close]

BLAST of PI0019045 vs. ExPASy Swiss-Prot
Match: Q9FGJ6 (RING-H2 finger protein ATL79 OS=Arabidopsis thaliana OX=3702 GN=ATL79 PE=2 SV=1)

HSP 1 Score: 140.2 bits (352), Expect = 2.3e-32
Identity = 77/161 (47.83%), Postives = 104/161 (64.60%), Query Frame = 0


Query: 19  SPPCHDLRACTWRPYSNSRDFEANAAVVVIILLCGLICALALNTAIRCFLRRRGTSDDDS 78
           +P C+    C W+PYSNS DF ANA+V++I+++  LICAL+L  AIRCFLR    ++DD 
Sbjct: 17  TPTCNS-HTCRWKPYSNSTDFTANASVLLILVISALICALSLYAAIRCFLRPTLETEDDH 76

Query: 79  SDSRQEELQEETKPTLVDKLKMAPALVFSAEMKPKLAGAEAECTICLTEFSEGEEIRVLA 138
                 E    + PT        P LV+S+++  +LAGAEAEC ICL+EF +GE I+VL 
Sbjct: 77  KP--DPEAAASSTPT-------TPTLVYSSDL--ELAGAEAECAICLSEFEQGESIQVLE 136

Query: 139 ICKHGFHVQCIQTWLISHSSCPTCRRSYL---PPSPSSSVS 177
            C+HGFHV+CI  WL + SSCPTCR S       +PSS ++
Sbjct: 137 KCQHGFHVKCIHKWLSTRSSCPTCRTSIFSQHSETPSSHIN 165

[Close]

BLAST of PI0019045 vs. ExPASy Swiss-Prot
Match: Q9FLC6 (RING-H2 finger protein ATL73 OS=Arabidopsis thaliana OX=3702 GN=ATL73 PE=2 SV=1)

HSP 1 Score: 112.1 bits (279), Expect = 6.8e-24
Identity = 61/135 (45.19%), Postives = 81/135 (60.00%), Query Frame = 0


Query: 35  NSRDFEANAAVVVIILLCGLICALALNTAIRCFLR--RRGTSDDDSSDSRQEELQEETKP 94
           N    + +  +++  LLC LICAL +N+ +RC LR  RR T ++D  D+     +   K 
Sbjct: 33  NIASMDTHMVIILAALLCALICALGINSVLRCVLRCTRRFTPNEDPVDTNANVAKGIKKR 92

Query: 95  TLVDKLKMAPALVFSAEMKPKLAGAEAECTICLTEFSEGEEIRVLAICKHGFHVQCIQTW 154
                LK+ P   +S E+K K      EC ICL +F EGE +RVL  C HGFHV+CI TW
Sbjct: 93  A----LKVIPVDSYSPELKMK----ATECLICLGDFVEGETVRVLPKCNHGFHVKCIDTW 152

Query: 155 LISHSSCPTCRRSYL 168
           L+SHSSCPTCR+S L
Sbjct: 153 LLSHSSCPTCRQSLL 159

[Close]

BLAST of PI0019045 vs. ExPASy Swiss-Prot
Match: Q9SG96 (RING-H2 finger protein ATL72 OS=Arabidopsis thaliana OX=3702 GN=ATL72 PE=2 SV=1)

HSP 1 Score: 111.7 bits (278), Expect = 8.8e-24
Identity = 66/144 (45.83%), Postives = 87/144 (60.42%), Query Frame = 0


Query: 35  NSRDFEANAAVVVIILLCGLICALALNTAIRCFLR--RRGTSDDDSSD--SRQEELQEET 94
           N   F+ N  +++  LLC LICAL+LN+A+RC LR  RR TSDD  S+  +    L    
Sbjct: 25  NDTYFDTNMVIILAALLCALICALSLNSALRCVLRITRRFTSDDQVSNASNANANLGRLA 84

Query: 95  KPTLVDK--LKMAPALVFSAEMKPKLAGAEAECTICLTEFSEGEEIRVLAICKHGFHVQC 154
             T + K  LK  P  ++ + +    A    EC ICL +F +GE++RVL  C HGFHV+C
Sbjct: 85  AATGLKKQALKQIPVGLYGSGIIDMKA---TECLICLGDFEDGEKVRVLPKCNHGFHVRC 144

Query: 155 IQTWLISHSSCPTCRRSYLPPSPS 173
           I TWL+S SSCPTCR+S L   PS
Sbjct: 145 IDTWLLSRSSCPTCRQSLLLEQPS 165

[Close]

BLAST of PI0019045 vs. ExPASy Swiss-Prot
Match: Q6NQG7 (RING-H2 finger protein ATL78 OS=Arabidopsis thaliana OX=3702 GN=ATL78 PE=2 SV=1)

HSP 1 Score: 103.2 bits (256), Expect = 3.1e-21
Identity = 57/134 (42.54%), Postives = 79/134 (58.96%), Query Frame = 0


Query: 32  PYSNSRDFEANAAVVVIILLCGLICALALNTAIRCFLRRRGTSDDDSSDSRQEELQEETK 91
           PY    +F+AN  +V+ +LLC L+C+L LN+ IRC LR    S+   S++  +       
Sbjct: 45  PYVGDNNFDANVVMVLSVLLCALVCSLGLNSIIRCALR---CSNLVPSEAGGDNYPVRLT 104

Query: 92  PTLVDK--LKMAPALVFSAEMKPKLAGAEAECTICLTEFSEGEEIRVLAICKHGFHVQCI 151
            T V +  LK    + +S E+   L G + EC ICL+EF   E +++L  C HGFHV+CI
Sbjct: 105 NTGVKRKALKSFQTVSYSTEL--NLPGLDTECAICLSEFVAEERVKLLPTCHHGFHVRCI 164

Query: 152 QTWLISHSSCPTCR 164
             WL SHSSCPTCR
Sbjct: 165 DKWLSSHSSCPTCR 173

[Close]

BLAST of PI0019045 vs. ExPASy Swiss-Prot
Match: Q8LC69 (RING-H2 finger protein ATL8 OS=Arabidopsis thaliana OX=3702 GN=ATL8 PE=2 SV=2)

HSP 1 Score: 99.4 bits (246), Expect = 4.5e-20
Identity = 54/133 (40.60%), Postives = 72/133 (54.14%), Query Frame = 0


Query: 32  PYSNSRDFEANAAVVVIILLCGLICALALNTAIRCFLRRRGTSDDDSSDSRQEELQEETK 91
           P   S  F ++  +++ +LLC L C + L    RC   RR  S + S  +    +    K
Sbjct: 17  PAEASPPFNSDLVLILAVLLCALTCIIGLIAVSRCAWLRRIASRNRSDQTHPPPVAAANK 76

Query: 92  PTLVDKLKMAPALVFSAEMKPKLAGAEAECTICLTEFSEGEEIRVLAICKHGFHVQCIQT 151
                 L+  P L +S +  P  A    EC ICLTEF+ G+E+RVL  C HGFHV CI T
Sbjct: 77  GLKKKVLRSLPKLTYSPDSPP--AEKLVECAICLTEFAAGDELRVLPQCGHGFHVSCIDT 136

Query: 152 WLISHSSCPTCRR 165
           WL SHSSCP+CR+
Sbjct: 137 WLGSHSSCPSCRQ 147

[Close]

BLAST of PI0019045 vs. ExPASy TrEMBL
Match: A0A5D3C3S3 (RING-type E3 ubiquitin transferase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold376G001240 PE=3 SV=1)

HSP 1 Score: 364.0 bits (933), Expect = 3.6e-97
Identity = 177/182 (97.25%), Postives = 181/182 (99.45%), Query Frame = 0


Query: 1   MRPTPLDADDTIRFQPPPSPPCHDLRACTWRPYSNSRDFEANAAVVVIILLCGLICALAL 60
           MRPTPLDAD+T+RFQPPPSPPCHDLRACTWRPYSNSRDFEANAAVVVIILLCGLICALAL
Sbjct: 1   MRPTPLDADETVRFQPPPSPPCHDLRACTWRPYSNSRDFEANAAVVVIILLCGLICALAL 60

Query: 61  NTAIRCFLRRRGTSDDDSSDSRQEELQEETKPTLVDKLKMAPALVFSAEMKPKLAGAEAE 120
           NTAIRCFLRRRGTSDDDS+DSRQEELQEETKPTLV+KLKMAPALVFSAEMKPKLAGAEAE
Sbjct: 61  NTAIRCFLRRRGTSDDDSNDSRQEELQEETKPTLVEKLKMAPALVFSAEMKPKLAGAEAE 120

Query: 121 CTICLTEFSEGEEIRVLAICKHGFHVQCIQTWLISHSSCPTCRRSYLPPSPSSSVSGADG 180
           CTICLTEFSEGEEIRVLAICKHGFHVQCIQTWLISHSSCPTCRRSYLPPSPSSSVSG DG
Sbjct: 121 CTICLTEFSEGEEIRVLAICKHGFHVQCIQTWLISHSSCPTCRRSYLPPSPSSSVSGGDG 180

Query: 181 NP 183
           NP
Sbjct: 181 NP 182

[Close]

BLAST of PI0019045 vs. ExPASy TrEMBL
Match: A0A1S3AU49 (RING-type E3 ubiquitin transferase OS=Cucumis melo OX=3656 GN=LOC103482889 PE=3 SV=1)

HSP 1 Score: 364.0 bits (933), Expect = 3.6e-97
Identity = 177/182 (97.25%), Postives = 181/182 (99.45%), Query Frame = 0


Query: 1   MRPTPLDADDTIRFQPPPSPPCHDLRACTWRPYSNSRDFEANAAVVVIILLCGLICALAL 60
           MRPTPLDAD+T+RFQPPPSPPCHDLRACTWRPYSNSRDFEANAAVVVIILLCGLICALAL
Sbjct: 1   MRPTPLDADETVRFQPPPSPPCHDLRACTWRPYSNSRDFEANAAVVVIILLCGLICALAL 60

Query: 61  NTAIRCFLRRRGTSDDDSSDSRQEELQEETKPTLVDKLKMAPALVFSAEMKPKLAGAEAE 120
           NTAIRCFLRRRGTSDDDS+DSRQEELQEETKPTLV+KLKMAPALVFSAEMKPKLAGAEAE
Sbjct: 61  NTAIRCFLRRRGTSDDDSNDSRQEELQEETKPTLVEKLKMAPALVFSAEMKPKLAGAEAE 120

Query: 121 CTICLTEFSEGEEIRVLAICKHGFHVQCIQTWLISHSSCPTCRRSYLPPSPSSSVSGADG 180
           CTICLTEFSEGEEIRVLAICKHGFHVQCIQTWLISHSSCPTCRRSYLPPSPSSSVSG DG
Sbjct: 121 CTICLTEFSEGEEIRVLAICKHGFHVQCIQTWLISHSSCPTCRRSYLPPSPSSSVSGGDG 180

Query: 181 NP 183
           NP
Sbjct: 181 NP 182

[Close]

BLAST of PI0019045 vs. ExPASy TrEMBL
Match: A0A0A0KNJ7 (RING-type E3 ubiquitin transferase OS=Cucumis sativus OX=3659 GN=Csa_5G146260 PE=3 SV=1)

HSP 1 Score: 360.1 bits (923), Expect = 5.3e-96
Identity = 175/182 (96.15%), Postives = 179/182 (98.35%), Query Frame = 0


Query: 1   MRPTPLDADDTIRFQPPPSPPCHDLRACTWRPYSNSRDFEANAAVVVIILLCGLICALAL 60
           MRPTPLDADDT+RFQPPPSPPCHDLRACTWRPYS+SRDFEANAAVVVIILLCGLICALAL
Sbjct: 1   MRPTPLDADDTVRFQPPPSPPCHDLRACTWRPYSSSRDFEANAAVVVIILLCGLICALAL 60

Query: 61  NTAIRCFLRRRGTSDDDSSDSRQEELQEETKPTLVDKLKMAPALVFSAEMKPKLAGAEAE 120
           NTAIRCFLRRRGTSDDDSSDSRQEEL EETKPTL+DKLKMAPALVFSAEMKPKLAGAEAE
Sbjct: 61  NTAIRCFLRRRGTSDDDSSDSRQEELPEETKPTLMDKLKMAPALVFSAEMKPKLAGAEAE 120

Query: 121 CTICLTEFSEGEEIRVLAICKHGFHVQCIQTWLISHSSCPTCRRSYLPPSPSSSVSGADG 180
           CTICLTEFSEGEEIRVL+ICKHGFHVQCIQTWLISHSSCPTCRRSYLPPSPSSS SG DG
Sbjct: 121 CTICLTEFSEGEEIRVLSICKHGFHVQCIQTWLISHSSCPTCRRSYLPPSPSSSASGGDG 180

Query: 181 NP 183
           NP
Sbjct: 181 NP 182

[Close]

BLAST of PI0019045 vs. ExPASy TrEMBL
Match: A0A6J1ELF7 (RING-type E3 ubiquitin transferase OS=Cucurbita moschata OX=3662 GN=LOC111435709 PE=3 SV=1)

HSP 1 Score: 329.7 bits (844), Expect = 7.6e-87
Identity = 161/182 (88.46%), Postives = 172/182 (94.51%), Query Frame = 0


Query: 1   MRPTPLDADDTIRFQ-PPPSPPCHDLRACTWRPYSNSRDFEANAAVVVIILLCGLICALA 60
           MRPTPLDADDT+ FQ PPP PPCHDLRACTWRPYSNSRDFEANAAVVVIILLCGLIC+LA
Sbjct: 1   MRPTPLDADDTVSFQPPPPPPPCHDLRACTWRPYSNSRDFEANAAVVVIILLCGLICSLA 60

Query: 61  LNTAIRCFLRRRGTSDDDSSDSRQEELQEETKPTLVDKLKMAPALVFSAEMKPKLAGAEA 120
           LNTAIRCFLRRRG +D++ SD+RQEEL++ETKPTLVDKLKMAPALVFSAE+KPKLAGAEA
Sbjct: 61  LNTAIRCFLRRRGDADENPSDTRQEELRDETKPTLVDKLKMAPALVFSAEIKPKLAGAEA 120

Query: 121 ECTICLTEFSEGEEIRVLAICKHGFHVQCIQTWLISHSSCPTCRRSYLPPSPSSSVSGAD 180
           ECTICLTEFSEGEEIRVLAICKHGFHVQCIQTWLI HSSCPTCR SYLPPSPSS+  G D
Sbjct: 121 ECTICLTEFSEGEEIRVLAICKHGFHVQCIQTWLILHSSCPTCRCSYLPPSPSSAAHGGD 180

Query: 181 GN 182
           G+
Sbjct: 181 GD 182

[Close]

BLAST of PI0019045 vs. ExPASy TrEMBL
Match: A0A6J1I2W6 (RING-type E3 ubiquitin transferase OS=Cucurbita maxima OX=3661 GN=LOC111469099 PE=3 SV=1)

HSP 1 Score: 323.9 bits (829), Expect = 4.2e-85
Identity = 158/180 (87.78%), Postives = 169/180 (93.89%), Query Frame = 0


Query: 1   MRPTPLDADDTIRFQPP-PSPPCHDLRACTWRPYSNSRDFEANAAVVVIILLCGLICALA 60
           MRPTPLDADDT+ ++PP P PPCHDLRACTWRPYSNSRDFEANAAVVVIILLCGLIC+LA
Sbjct: 1   MRPTPLDADDTVSYRPPSPPPPCHDLRACTWRPYSNSRDFEANAAVVVIILLCGLICSLA 60

Query: 61  LNTAIRCFLRRRGTSDDDSSDSRQEELQEETKPTLVDKLKMAPALVFSAEMKPKLAGAEA 120
           LNTAIRCFLRRRG +D++ SD+RQEEL++ETKPTLVDKLKMAPALVFS EMKPKLAGAEA
Sbjct: 61  LNTAIRCFLRRRGDADENPSDTRQEELRDETKPTLVDKLKMAPALVFSEEMKPKLAGAEA 120

Query: 121 ECTICLTEFSEGEEIRVLAICKHGFHVQCIQTWLISHSSCPTCRRSYLPPSPSSSVSGAD 180
           ECTICLTEFSEGEEIRVLAICKHGFHVQCIQTWLI HSSCPTCR SYLPPSPSS+  G D
Sbjct: 121 ECTICLTEFSEGEEIRVLAICKHGFHVQCIQTWLILHSSCPTCRCSYLPPSPSSAAHGGD 180

[Close]

BLAST of PI0019045 vs. NCBI nr
Match: XP_008437481.1 (PREDICTED: RING-H2 finger protein ATL79-like [Cucumis melo] >KAA0042624.1 RING-H2 finger protein ATL79-like [Cucumis melo var. makuwa] >TYK06025.1 RING-H2 finger protein ATL79-like [Cucumis melo var. makuwa])

HSP 1 Score: 364.0 bits (933), Expect = 7.5e-97
Identity = 177/182 (97.25%), Postives = 181/182 (99.45%), Query Frame = 0


Query: 1   MRPTPLDADDTIRFQPPPSPPCHDLRACTWRPYSNSRDFEANAAVVVIILLCGLICALAL 60
           MRPTPLDAD+T+RFQPPPSPPCHDLRACTWRPYSNSRDFEANAAVVVIILLCGLICALAL
Sbjct: 1   MRPTPLDADETVRFQPPPSPPCHDLRACTWRPYSNSRDFEANAAVVVIILLCGLICALAL 60

Query: 61  NTAIRCFLRRRGTSDDDSSDSRQEELQEETKPTLVDKLKMAPALVFSAEMKPKLAGAEAE 120
           NTAIRCFLRRRGTSDDDS+DSRQEELQEETKPTLV+KLKMAPALVFSAEMKPKLAGAEAE
Sbjct: 61  NTAIRCFLRRRGTSDDDSNDSRQEELQEETKPTLVEKLKMAPALVFSAEMKPKLAGAEAE 120

Query: 121 CTICLTEFSEGEEIRVLAICKHGFHVQCIQTWLISHSSCPTCRRSYLPPSPSSSVSGADG 180
           CTICLTEFSEGEEIRVLAICKHGFHVQCIQTWLISHSSCPTCRRSYLPPSPSSSVSG DG
Sbjct: 121 CTICLTEFSEGEEIRVLAICKHGFHVQCIQTWLISHSSCPTCRRSYLPPSPSSSVSGGDG 180

Query: 181 NP 183
           NP
Sbjct: 181 NP 182

[Close]

BLAST of PI0019045 vs. NCBI nr
Match: XP_004145965.1 (RING-H2 finger protein ATL79 [Cucumis sativus] >KGN49952.1 hypothetical protein Csa_000591 [Cucumis sativus])

HSP 1 Score: 360.1 bits (923), Expect = 1.1e-95
Identity = 175/182 (96.15%), Postives = 179/182 (98.35%), Query Frame = 0


Query: 1   MRPTPLDADDTIRFQPPPSPPCHDLRACTWRPYSNSRDFEANAAVVVIILLCGLICALAL 60
           MRPTPLDADDT+RFQPPPSPPCHDLRACTWRPYS+SRDFEANAAVVVIILLCGLICALAL
Sbjct: 1   MRPTPLDADDTVRFQPPPSPPCHDLRACTWRPYSSSRDFEANAAVVVIILLCGLICALAL 60

Query: 61  NTAIRCFLRRRGTSDDDSSDSRQEELQEETKPTLVDKLKMAPALVFSAEMKPKLAGAEAE 120
           NTAIRCFLRRRGTSDDDSSDSRQEEL EETKPTL+DKLKMAPALVFSAEMKPKLAGAEAE
Sbjct: 61  NTAIRCFLRRRGTSDDDSSDSRQEELPEETKPTLMDKLKMAPALVFSAEMKPKLAGAEAE 120

Query: 121 CTICLTEFSEGEEIRVLAICKHGFHVQCIQTWLISHSSCPTCRRSYLPPSPSSSVSGADG 180
           CTICLTEFSEGEEIRVL+ICKHGFHVQCIQTWLISHSSCPTCRRSYLPPSPSSS SG DG
Sbjct: 121 CTICLTEFSEGEEIRVLSICKHGFHVQCIQTWLISHSSCPTCRRSYLPPSPSSSASGGDG 180

Query: 181 NP 183
           NP
Sbjct: 181 NP 182

[Close]

BLAST of PI0019045 vs. NCBI nr
Match: XP_038875287.1 (RING-H2 finger protein ATL79-like [Benincasa hispida])

HSP 1 Score: 347.1 bits (889), Expect = 9.5e-92
Identity = 169/181 (93.37%), Postives = 174/181 (96.13%), Query Frame = 0


Query: 1   MRPTPLDADDTIRFQPPPSPPCHDLRACTWRPYSNSRDFEANAAVVVIILLCGLICALAL 60
           MRPTPLDADDT+ FQPPPSPPCHDLRACTWRPYSNSRDFEANAAVVVIILLCGLICALAL
Sbjct: 1   MRPTPLDADDTVAFQPPPSPPCHDLRACTWRPYSNSRDFEANAAVVVIILLCGLICALAL 60

Query: 61  NTAIRCFLRRRGTSDDDSSDSRQEELQEETKPTLVDKLKMAPALVFSAEMKPKLAGAEAE 120
           NTAIRCFLRRRG++DDD SDSRQEELQ+ETKPTLVDKLKMAPALVFSAE KPKLAGAEAE
Sbjct: 61  NTAIRCFLRRRGSADDDPSDSRQEELQDETKPTLVDKLKMAPALVFSAETKPKLAGAEAE 120

Query: 121 CTICLTEFSEGEEIRVLAICKHGFHVQCIQTWLISHSSCPTCRRSYLPPSPSSSVSGADG 180
           CTICLTEF EGEEIRVLAICKHGFHVQCIQTWLI HSSCPTCRRSYLPPSP SSVSG DG
Sbjct: 121 CTICLTEFLEGEEIRVLAICKHGFHVQCIQTWLILHSSCPTCRRSYLPPSPPSSVSGGDG 180

Query: 181 N 182
           +
Sbjct: 181 D 181

[Close]

BLAST of PI0019045 vs. NCBI nr
Match: KAG7017072.1 (RING-H2 finger protein ATL79, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 329.7 bits (844), Expect = 1.6e-86
Identity = 161/182 (88.46%), Postives = 172/182 (94.51%), Query Frame = 0


Query: 1   MRPTPLDADDTIRFQ-PPPSPPCHDLRACTWRPYSNSRDFEANAAVVVIILLCGLICALA 60
           MRPTPLDADDT+ FQ PPP PPCHDLRACTWRPYSNSRDFEANAAVVVIILLCGLIC+LA
Sbjct: 1   MRPTPLDADDTVSFQPPPPPPPCHDLRACTWRPYSNSRDFEANAAVVVIILLCGLICSLA 60

Query: 61  LNTAIRCFLRRRGTSDDDSSDSRQEELQEETKPTLVDKLKMAPALVFSAEMKPKLAGAEA 120
           LNTAIRCFLRRRG +D++ SD+RQEEL++ETKPTLVDKLKMAPALVFSAE+KPKLAGAEA
Sbjct: 61  LNTAIRCFLRRRGDADENPSDTRQEELRDETKPTLVDKLKMAPALVFSAEIKPKLAGAEA 120

Query: 121 ECTICLTEFSEGEEIRVLAICKHGFHVQCIQTWLISHSSCPTCRRSYLPPSPSSSVSGAD 180
           ECTICLTEFSEGEEIRVLAICKHGFHVQCIQTWLI HSSCPTCR SYLPPSPSS+  G D
Sbjct: 121 ECTICLTEFSEGEEIRVLAICKHGFHVQCIQTWLILHSSCPTCRCSYLPPSPSSAAHGGD 180

Query: 181 GN 182
           G+
Sbjct: 181 GD 182

[Close]

BLAST of PI0019045 vs. NCBI nr
Match: XP_022928967.1 (RING-H2 finger protein ATL79-like [Cucurbita moschata] >KAG6579615.1 RING-H2 finger protein ATL79, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 329.7 bits (844), Expect = 1.6e-86
Identity = 161/182 (88.46%), Postives = 172/182 (94.51%), Query Frame = 0


Query: 1   MRPTPLDADDTIRFQ-PPPSPPCHDLRACTWRPYSNSRDFEANAAVVVIILLCGLICALA 60
           MRPTPLDADDT+ FQ PPP PPCHDLRACTWRPYSNSRDFEANAAVVVIILLCGLIC+LA
Sbjct: 1   MRPTPLDADDTVSFQPPPPPPPCHDLRACTWRPYSNSRDFEANAAVVVIILLCGLICSLA 60

Query: 61  LNTAIRCFLRRRGTSDDDSSDSRQEELQEETKPTLVDKLKMAPALVFSAEMKPKLAGAEA 120
           LNTAIRCFLRRRG +D++ SD+RQEEL++ETKPTLVDKLKMAPALVFSAE+KPKLAGAEA
Sbjct: 61  LNTAIRCFLRRRGDADENPSDTRQEELRDETKPTLVDKLKMAPALVFSAEIKPKLAGAEA 120

Query: 121 ECTICLTEFSEGEEIRVLAICKHGFHVQCIQTWLISHSSCPTCRRSYLPPSPSSSVSGAD 180
           ECTICLTEFSEGEEIRVLAICKHGFHVQCIQTWLI HSSCPTCR SYLPPSPSS+  G D
Sbjct: 121 ECTICLTEFSEGEEIRVLAICKHGFHVQCIQTWLILHSSCPTCRCSYLPPSPSSAAHGGD 180

Query: 181 GN 182
           G+
Sbjct: 181 GD 182

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BLAST of PI0019045 vs. TAIR 10
Match: AT5G47610.1 (RING/U-box superfamily protein )

HSP 1 Score: 140.2 bits (352), Expect = 1.6e-33
Identity = 77/161 (47.83%), Postives = 104/161 (64.60%), Query Frame = 0


Query: 19  SPPCHDLRACTWRPYSNSRDFEANAAVVVIILLCGLICALALNTAIRCFLRRRGTSDDDS 78
           +P C+    C W+PYSNS DF ANA+V++I+++  LICAL+L  AIRCFLR    ++DD 
Sbjct: 17  TPTCNS-HTCRWKPYSNSTDFTANASVLLILVISALICALSLYAAIRCFLRPTLETEDDH 76

Query: 79  SDSRQEELQEETKPTLVDKLKMAPALVFSAEMKPKLAGAEAECTICLTEFSEGEEIRVLA 138
                 E    + PT        P LV+S+++  +LAGAEAEC ICL+EF +GE I+VL 
Sbjct: 77  KP--DPEAAASSTPT-------TPTLVYSSDL--ELAGAEAECAICLSEFEQGESIQVLE 136

Query: 139 ICKHGFHVQCIQTWLISHSSCPTCRRSYL---PPSPSSSVS 177
            C+HGFHV+CI  WL + SSCPTCR S       +PSS ++
Sbjct: 137 KCQHGFHVKCIHKWLSTRSSCPTCRTSIFSQHSETPSSHIN 165

[Close]

BLAST of PI0019045 vs. TAIR 10
Match: AT4G17245.1 (RING/U-box superfamily protein )

HSP 1 Score: 122.9 bits (307), Expect = 2.7e-28
Identity = 74/158 (46.84%), Postives = 90/158 (56.96%), Query Frame = 0


Query: 15  QPPPSPPCHDLRACTWRPYSNSRDFEANAAVVVIILLCGLICALALNTAIRCFLRRRGTS 74
           QP  +  C    +C W+PYS+S DF ANA +++IIL C  IC L+L+ AIRC L R    
Sbjct: 10  QPELTSTCTS-HSCGWKPYSHSNDFAANAFLLLIILFCSFICVLSLHAAIRCCL-RPVLQ 69

Query: 75  DDDSSDSRQEELQEETKPTLVDKLKMAPALVFSAEMKPKLAGAEAECTICLTEFSEGEEI 134
                D   E    +  PTLV     +P L         LAG EAEC ICL+EF +G+ +
Sbjct: 70  HVPKPDPDLEATHPDAPPTLV----YSPGL--------NLAGNEAECIICLSEFQDGDTL 129

Query: 135 RVLAICKHGFHVQCIQTWL-ISHSSCPTCRRSYLPPSP 172
           RVL  CKHGFHV CIQ WL  SHSSCPTCR +     P
Sbjct: 130 RVLERCKHGFHVYCIQKWLSSSHSSCPTCRTNIFSSPP 153

[Close]

BLAST of PI0019045 vs. TAIR 10
Match: AT5G05280.1 (RING/U-box superfamily protein )

HSP 1 Score: 112.1 bits (279), Expect = 4.8e-25
Identity = 61/135 (45.19%), Postives = 81/135 (60.00%), Query Frame = 0


Query: 35  NSRDFEANAAVVVIILLCGLICALALNTAIRCFLR--RRGTSDDDSSDSRQEELQEETKP 94
           N    + +  +++  LLC LICAL +N+ +RC LR  RR T ++D  D+     +   K 
Sbjct: 33  NIASMDTHMVIILAALLCALICALGINSVLRCVLRCTRRFTPNEDPVDTNANVAKGIKKR 92

Query: 95  TLVDKLKMAPALVFSAEMKPKLAGAEAECTICLTEFSEGEEIRVLAICKHGFHVQCIQTW 154
                LK+ P   +S E+K K      EC ICL +F EGE +RVL  C HGFHV+CI TW
Sbjct: 93  A----LKVIPVDSYSPELKMK----ATECLICLGDFVEGETVRVLPKCNHGFHVKCIDTW 152

Query: 155 LISHSSCPTCRRSYL 168
           L+SHSSCPTCR+S L
Sbjct: 153 LLSHSSCPTCRQSLL 159

[Close]

BLAST of PI0019045 vs. TAIR 10
Match: AT3G10910.1 (RING/U-box superfamily protein )

HSP 1 Score: 111.7 bits (278), Expect = 6.3e-25
Identity = 66/144 (45.83%), Postives = 87/144 (60.42%), Query Frame = 0


Query: 35  NSRDFEANAAVVVIILLCGLICALALNTAIRCFLR--RRGTSDDDSSD--SRQEELQEET 94
           N   F+ N  +++  LLC LICAL+LN+A+RC LR  RR TSDD  S+  +    L    
Sbjct: 25  NDTYFDTNMVIILAALLCALICALSLNSALRCVLRITRRFTSDDQVSNASNANANLGRLA 84

Query: 95  KPTLVDK--LKMAPALVFSAEMKPKLAGAEAECTICLTEFSEGEEIRVLAICKHGFHVQC 154
             T + K  LK  P  ++ + +    A    EC ICL +F +GE++RVL  C HGFHV+C
Sbjct: 85  AATGLKKQALKQIPVGLYGSGIIDMKA---TECLICLGDFEDGEKVRVLPKCNHGFHVRC 144

Query: 155 IQTWLISHSSCPTCRRSYLPPSPS 173
           I TWL+S SSCPTCR+S L   PS
Sbjct: 145 IDTWLLSRSSCPTCRQSLLLEQPS 165

[Close]

BLAST of PI0019045 vs. TAIR 10
Match: AT1G49230.1 (RING/U-box superfamily protein )

HSP 1 Score: 103.2 bits (256), Expect = 2.2e-22
Identity = 57/134 (42.54%), Postives = 79/134 (58.96%), Query Frame = 0


Query: 32  PYSNSRDFEANAAVVVIILLCGLICALALNTAIRCFLRRRGTSDDDSSDSRQEELQEETK 91
           PY    +F+AN  +V+ +LLC L+C+L LN+ IRC LR    S+   S++  +       
Sbjct: 45  PYVGDNNFDANVVMVLSVLLCALVCSLGLNSIIRCALR---CSNLVPSEAGGDNYPVRLT 104

Query: 92  PTLVDK--LKMAPALVFSAEMKPKLAGAEAECTICLTEFSEGEEIRVLAICKHGFHVQCI 151
            T V +  LK    + +S E+   L G + EC ICL+EF   E +++L  C HGFHV+CI
Sbjct: 105 NTGVKRKALKSFQTVSYSTEL--NLPGLDTECAICLSEFVAEERVKLLPTCHHGFHVRCI 164

Query: 152 QTWLISHSSCPTCR 164
             WL SHSSCPTCR
Sbjct: 165 DKWLSSHSSCPTCR 173

The following BLAST results are available for this feature:

BLAST of PI0019045 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FGJ6	2.3e-32	47.83	RING-H2 finger protein ATL79 OS=Arabidopsis thaliana OX=3702 GN=ATL79 PE=2 SV=1	[more]
Q9FLC6	6.8e-24	45.19	RING-H2 finger protein ATL73 OS=Arabidopsis thaliana OX=3702 GN=ATL73 PE=2 SV=1	[more]
Q9SG96	8.8e-24	45.83	RING-H2 finger protein ATL72 OS=Arabidopsis thaliana OX=3702 GN=ATL72 PE=2 SV=1	[more]
Q6NQG7	3.1e-21	42.54	RING-H2 finger protein ATL78 OS=Arabidopsis thaliana OX=3702 GN=ATL78 PE=2 SV=1	[more]
Q8LC69	4.5e-20	40.60	RING-H2 finger protein ATL8 OS=Arabidopsis thaliana OX=3702 GN=ATL8 PE=2 SV=2	[more]

BLAST of PI0019045 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3C3S3	3.6e-97	97.25	RING-type E3 ubiquitin transferase OS=Cucumis melo var. makuwa OX=1194695 GN=E56...	[more]
A0A1S3AU49	3.6e-97	97.25	RING-type E3 ubiquitin transferase OS=Cucumis melo OX=3656 GN=LOC103482889 PE=3 ...	[more]
A0A0A0KNJ7	5.3e-96	96.15	RING-type E3 ubiquitin transferase OS=Cucumis sativus OX=3659 GN=Csa_5G146260 PE...	[more]
A0A6J1ELF7	7.6e-87	88.46	RING-type E3 ubiquitin transferase OS=Cucurbita moschata OX=3662 GN=LOC111435709...	[more]
A0A6J1I2W6	4.2e-85	87.78	RING-type E3 ubiquitin transferase OS=Cucurbita maxima OX=3661 GN=LOC111469099 P...	[more]

BLAST of PI0019045 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008437481.1	7.5e-97	97.25	PREDICTED: RING-H2 finger protein ATL79-like [Cucumis melo] >KAA0042624.1 RING-H...	[more]
XP_004145965.1	1.1e-95	96.15	RING-H2 finger protein ATL79 [Cucumis sativus] >KGN49952.1 hypothetical protein ...	[more]
XP_038875287.1	9.5e-92	93.37	RING-H2 finger protein ATL79-like [Benincasa hispida]	[more]
KAG7017072.1	1.6e-86	88.46	RING-H2 finger protein ATL79, partial [Cucurbita argyrosperma subsp. argyrosperm...	[more]
XP_022928967.1	1.6e-86	88.46	RING-H2 finger protein ATL79-like [Cucurbita moschata] >KAG6579615.1 RING-H2 fin...	[more]

BLAST of PI0019045 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G47610.1	1.6e-33	47.83	RING/U-box superfamily protein	[more]
AT4G17245.1	2.7e-28	46.84	RING/U-box superfamily protein	[more]
AT5G05280.1	4.8e-25	45.19	RING/U-box superfamily protein	[more]
AT3G10910.1	6.3e-25	45.83	RING/U-box superfamily protein	[more]
AT1G49230.1	2.2e-22	42.54	RING/U-box superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 121..162 e-value: 7.1E-6 score: 35.5
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 120..163 e-value: 4.7E-13 score: 49.3
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 121..163 score: 12.297489
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 76..168 e-value: 1.8E-20 score: 74.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 72..93
None	No IPR available	PANTHER	PTHR46905:SF1	RING-H2 FINGER PROTEIN ATL79-LIKE	coord: 15..176
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 120..169
IPR044602	RING-H2 finger protein ATL10/ATL75-79	PANTHER	PTHR46905	RING-H2 FINGER PROTEIN ATL78	coord: 15..176

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0019045.1	PI0019045.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016567	protein ubiquitination
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0016740	transferase activity