PI0019036 (gene) Melon (PI 482460) v1

Overview


Name	PI0019036
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	60S acidic ribosomal protein P2-like
Location	chr08: 17478253 .. 17481006 (-)
RNA-Seq Expression	PI0019036
Synteny	PI0019036

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GGAAGGGCCGCAGCATCTTCATCAGCAGCTTTATTTCCATTAACAGAACATCCCCTTCCTTTCTTTTATGAGCTGATCACCTCTGGTCTGCCATTTTTCCCCCCCTTCATAAAACAAACTCCCACTTTCTCACCATCACCATTCATTTCTTCTGCATTCTCAACAGCTTTAATTTGCTCATCTGGTACGTTACAATACCATTACAACCTCTTCTCTGTTCTTCCTCATTTTTCTTCTTCCCTCCTCATCTCTCTTTCTCTCTGATTTCTTTTCTTTTCAGAAGAAGAAGGAGAAGAACCATGAAGGTGGTTGCTGCTTATTTGCTTGCTGTTTTGGGTGGAAACAAAACCCCATCTGCTCAAGATATCAACACCATTCTCTCTTCTGGTTCTTTCTTTTTTATCTCTTCTCTGCTTCTTCTTCTTCTGTTTTATGTTTTTCTCCATCCATCCTATAACTTTCAAGAATCTGGTTTTAAAGCCAAGGAAATGGATTTCTAGATATGCTTCCAAACTTCATATTCCACCTACTTTTATATATAAAGATGAACTATATATGAACATTTTCACAGTTAACCCTTTTAGGCTTCCGTAAGTTGTTTTTCTGAGATTAGTGGGGTTTTTTTTTTCTGTGTTAGTTTAAAAACTTGTGGAAGTGTTGATTCAAATTTTTTATGTTTTGGTTGAAGATATAATAGTTTAGTTATGGTGATTAATCCAGATTTTAACAGCTCCAACGTGCTAGGGTTTCATAAGAAGCTGATTATTTTCTGGGGCTGTAGCTCCTTATATTCCCTCTCGCTCTCCCTCTTACTCTTTCTCACCAACGACTTCAGTTCGAGAGAGGAAATATGGAGAGCAAGAGAGGCGAATGGAGAGAAATGGCATAAACACCAAAGAGAGGGAAATATAGAGAGCCAAAGCTATAAGTCTATGAGTGTTGCTGTTCAAACTGAAATGCTTGGATTTTTATTAGTCAATTTTTTTCCTGAAATGACCATAAATGAAACCAGTGGAGAATATAAATTTTTTTATAGTTAAACGTGCCATACTTTCTATTTTGAAAGACCTTGATAAGTCTGATTATCATTAACCTAAATTTCTTTTTTATTGTATATTGTTTTGGGGTTCTTTTTGTTTTCATAAAATCAATCTGTTTTCCTTTATATAATCTCATGAACTCTACTTTCTTTAACAAAAGAAAAATCTTGTGTTGGGTTGTTTTTTTTACTTAATATTTTGATATAAAACACACTACACGATAACTGTTATATATTTTATTAAATTTTCTTTTTCTTTGTTGCTTAAGTTTTTTAGTCAACTGATTTAAGGATACAAAAATGCTAAAGAAATTCTAAAGGAAGAAAAAATAACCGACTTGAACACAGGACATTCTGAAATTTCATTATTTCTTTACATTTTCTTTCATATGAACAAATCATAAACGAAAGAAAAATTCACATAAAACCATTGAAATGTGGCAAAGGTATATACATTTTTTTAGTAAACTTTTTGTCCTTCACATGCACTTTTATAGGTTCCCTTGGAAAAATGAATTATCACTATCTGTTTCTTCTGCTTTTTGTGACAAGACACAAATCGACCAAAACACAGACACCATTTGGTTGACTCCACAGGATCTAAACCAACTAATGTTAGTTGACTAGAATAAAAGAACTCGTTTGGTTTGGTCCATTATTTTTTTTTATTTTTATTATCCTTAGCTCAAAATCGTTGTTGTTGGACAGGACAACCCATGACTTGTGAGAGACTTGCCTCTTAACTTTATTCTATACATCGGAAAGTTCTATGCATCACAACCACAAACCAACTAATGATAGAATATCAAGATTAAATTATATATCTAGTCCATGTTTATATCAAATAGGTCCCTAAACCTTTCGACGATATCTAAAAGTCACCAAACTTTTAATTTTGTGCTATCAGTTTCTAGGTACCTTCATCTAGCTGGATGAACATTAAACTTTCAACTTCATTTCAAATGAGTTTATAAATTGAAAAATATAGAATAGGTGGAATATATTAGACATAAAATTGGAAGTTTCACACCTGTAAAATTTAGGGGTGTATTTGTGGTAAGAATTTAAACTGGTAATTTTTAGCTAAATTTAATTGACCATGCCTTTTGATAGTCAATGGTTAACATTTGCACAGTTGGAGCTGAAGCTGAGGTTGAAAAGATTGAGCTGCTTCTTGCTGAAATTAAGGGGAAGGATATAACTGAGCTTATTGCCTGTGGGAGGCAGAAGATGGCATCCTTACCTACCGCTCCCGTTGTTGCAGCTGCTGTGCCTGCAGCCCCCTCTACCGTTGATGCTGCTGCTCCTGTTGCAGCTGAGGCTAAGATAGAGGAGAAAGATGACGCTATGGACTCTGATGAAGTAAATTACTTTTCCCTTCAACAACTTTGGATTAGTTGTTACTTGTTAGAATATAATTTATTATTAGTGTTGACTTTGTTTTCTTATGTGTGTTACAGGATATTTGCTTCTCTCTGTTTGAAGACGAGTAAGGAATTGGGCTCTTCCTTATAATTTCGCTTGGAATTAGGCTTCTAATGGCTTTGTTTTGTTGAAGAAAATCAACTTTATTCTCTGTTGCTAGACTATGGTTGTTGAAATTATCAGACTTTCTTTCTTGGATTGATGATCTTTTGCTTTGAGGAGCGAGAAAACAAACTTTTAACCTTGACTACGTGATTACCTAGTTGATATATATTTTGCCATTTCTCTTA

mRNA sequence

GGAAGGGCCGCAGCATCTTCATCAGCAGCTTTATTTCCATTAACAGAACATCCCCTTCCTTTCTTTTATGAGCTGATCACCTCTGGTCTGCCATTTTTCCCCCCCTTCATAAAACAAACTCCCACTTTCTCACCATCACCATTCATTTCTTCTGCATTCTCAACAGCTTTAATTTGCTCATCTGAAGAAGAAGGAGAAGAACCATGAAGGTGGTTGCTGCTTATTTGCTTGCTGTTTTGGGTGGAAACAAAACCCCATCTGCTCAAGATATCAACACCATTCTCTCTTCTGTTGGAGCTGAAGCTGAGGTTGAAAAGATTGAGCTGCTTCTTGCTGAAATTAAGGGGAAGGATATAACTGAGCTTATTGCCTGTGGGAGGCAGAAGATGGCATCCTTACCTACCGCTCCCGTTGTTGCAGCTGCTGTGCCTGCAGCCCCCTCTACCGTTGATGCTGCTGCTCCTGTTGCAGCTGAGGCTAAGATAGAGGAGAAAGATGACGCTATGGACTCTGATGAAGATATTTGCTTCTCTCTGTTTGAAGACGAGTAAGGAATTGGGCTCTTCCTTATAATTTCGCTTGGAATTAGGCTTCTAATGGCTTTGTTTTGTTGAAGAAAATCAACTTTATTCTCTGTTGCTAGACTATGGTTGTTGAAATTATCAGACTTTCTTTCTTGGATTGATGATCTTTTGCTTTGAGGAGCGAGAAAACAAACTTTTAACCTTGACTACGTGATTACCTAGTTGATATATATTTTGCCATTTCTCTTA

Coding sequence (CDS)

ATGAAGGTGGTTGCTGCTTATTTGCTTGCTGTTTTGGGTGGAAACAAAACCCCATCTGCTCAAGATATCAACACCATTCTCTCTTCTGTTGGAGCTGAAGCTGAGGTTGAAAAGATTGAGCTGCTTCTTGCTGAAATTAAGGGGAAGGATATAACTGAGCTTATTGCCTGTGGGAGGCAGAAGATGGCATCCTTACCTACCGCTCCCGTTGTTGCAGCTGCTGTGCCTGCAGCCCCCTCTACCGTTGATGCTGCTGCTCCTGTTGCAGCTGAGGCTAAGATAGAGGAGAAAGATGACGCTATGGACTCTGATGAAGATATTTGCTTCTCTCTGTTTGAAGACGAGTAA

Protein sequence

MKVVAAYLLAVLGGNKTPSAQDINTILSSVGAEAEVEKIELLLAEIKGKDITELIACGRQKMASLPTAPVVAAAVPAAPSTVDAAAPVAAEAKIEEKDDAMDSDEDICFSLFEDE

Homology

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BLAST of PI0019036 vs. ExPASy Swiss-Prot
Match: P41099 (60S acidic ribosomal protein P2 OS=Parthenium argentatum OX=35935 PE=3 SV=1)

HSP 1 Score: 105.9 bits (263), Expect = 3.1e-22
Identity = 63/114 (55.26%), Postives = 88/114 (77.19%), Query Frame = 0


Query: 1   MKVVAAYLLAVLGGNKTPSAQDINTILSSVGAEAEVEKIELLLAEIKGKDITELIACGRQ 60
           MKV+AA+LLA+LGGN +P+ +D+ +IL+SVGA+A+ +KIELLL+++KGKDITELIA GR+
Sbjct: 1   MKVIAAFLLALLGGNTSPTDEDLKSILASVGADADDDKIELLLSQVKGKDITELIASGRE 60

Query: 61  KMASLPTAPVVAAAVPAAPSTVDAAAPVAAEAKIEEKDDAMDSDEDICFSLFED 115
           ++AS+P+   VA A  A     DA A  A E K EEK +  +SDE++ FSLF+D
Sbjct: 61  RLASVPSGGGVAVAAAAGGGGGDAPAAAAEEPKKEEKSEE-ESDEELGFSLFDD 113

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BLAST of PI0019036 vs. ExPASy Swiss-Prot
Match: P46252 (60S acidic ribosomal protein P2A OS=Zea mays OX=4577 GN=RPP2A PE=1 SV=3)

HSP 1 Score: 100.9 bits (250), Expect = 9.9e-21
Identity = 69/117 (58.97%), Postives = 84/117 (71.79%), Query Frame = 0


Query: 1   MKVVAAYLLAVLGGNKTPSAQDINTILSSVGAEAEVEKIELLLAEIKGKDITELIACGRQ 60
           MK VAAYLLAVL GN +PSA D+  IL SVG E + EK+ELLL+++ GKDITELIA GR+
Sbjct: 1   MKFVAAYLLAVLAGNASPSADDLTAILESVGCEVDNEKMELLLSQLSGKDITELIAAGRE 60

Query: 61  KMASLPT---APVVAAAVPAAPSTVDAAAPVAAEAKIEEK-DDAMDSDEDICFSLFE 114
           K AS+P       VAAA PAA      AAP AAEAK EEK ++  +SD+D+ FSLF+
Sbjct: 61  KFASVPCGGGGVAVAAAAPAA----GGAAP-AAEAKKEEKVEEKEESDDDMGFSLFD 112

[Close]

BLAST of PI0019036 vs. ExPASy Swiss-Prot
Match: Q9LXM8 (60S acidic ribosomal protein P2-4 OS=Arabidopsis thaliana OX=3702 GN=RPP2D PE=3 SV=1)

HSP 1 Score: 99.8 bits (247), Expect = 2.2e-20
Identity = 62/113 (54.87%), Postives = 80/113 (70.80%), Query Frame = 0


Query: 1   MKVVAAYLLAVLGGNKTPSAQDINTILSSVGAEAEVEKIELLLAEIKGKDITELIACGRQ 60
           MKV AA+LLAVLGGN  PSA +I  I+ +VGA+ + E IELLL E+ GKDI ELIA GR+
Sbjct: 1   MKVAAAFLLAVLGGNANPSADNIKDIIGAVGADVDGESIELLLKEVSGKDIAELIASGRE 60

Query: 61  KMASLPTAPVVAAAVPAAPSTVDAAAPVAAEAKIEEKDDAMDSDEDICFSLFE 114
           K+AS+P+   V  AV AAPS+    A   AE K  +K++  +SD+D+ FSLFE
Sbjct: 61  KLASVPSGGGV--AVSAAPSSGGGGAAAPAEKKEAKKEEKEESDDDMGFSLFE 111

[Close]

BLAST of PI0019036 vs. ExPASy Swiss-Prot
Match: O24415 (60S acidic ribosomal protein P2B OS=Zea mays OX=4577 GN=RPP2B PE=1 SV=1)

HSP 1 Score: 98.2 bits (243), Expect = 6.4e-20
Identity = 62/115 (53.91%), Postives = 83/115 (72.17%), Query Frame = 0


Query: 1   MKVVAAYLLAVLGGNKTPSAQDINTILSSVGAEAEVEKIELLLAEIKGKDITELIACGRQ 60
           MKV+AAYLLAVLGGN +P+A D+ +IL SVGAEA+ EK+E LL E+K KDITE+IA GR+
Sbjct: 1   MKVIAAYLLAVLGGNTSPTADDVKSILESVGAEADEEKLEFLLTELKDKDITEVIAAGRE 60

Query: 61  KMASLPT-APVVAAAVPAAPSTVDAAAPVAAEAKIEEK-DDAMDSDEDICFSLFE 114
           +++S+P+    +    PAA       A  A EAK EEK ++  +SDED+ FSLF+
Sbjct: 61  RLSSVPSGGGAIDMGAPAA--VAGGGAAPAEEAKKEEKVEEKEESDEDMGFSLFD 113

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BLAST of PI0019036 vs. ExPASy Swiss-Prot
Match: O14317 (60S acidic ribosomal protein P2-C OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=rpp203 PE=1 SV=2)

HSP 1 Score: 96.3 bits (238), Expect = 2.4e-19
Identity = 57/113 (50.44%), Postives = 77/113 (68.14%), Query Frame = 0


Query: 1   MKVVAAYLLAVLGGNKTPSAQDINTILSSVGAEAEVEKIELLLAEIKGKDITELIACGRQ 60
           MK +AAYLL  +GG  +PSA DI ++LS+VG E+E E++E L+ E+ GKDI ELIA G +
Sbjct: 1   MKYLAAYLLLTVGGKNSPSASDIESVLSTVGIESESERVEALIKELDGKDIDELIAAGNE 60

Query: 61  KMASLPTAPVVAAAVPAAPSTVDAAAPVAAEAKIEEKDDAMDSDEDICFSLFE 114
           K+A++P+    AAA PAA      AAP A EA  EE  +  +SDED+ F LF+
Sbjct: 61  KLATVPSGGAAAAAAPAA---AGGAAPAAEEAAKEEAKEEEESDEDMGFGLFD 110

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BLAST of PI0019036 vs. ExPASy TrEMBL
Match: A0A1S4E3U5 (60S acidic ribosomal protein P2-like OS=Cucumis melo OX=3656 GN=LOC103500881 PE=3 SV=1)

HSP 1 Score: 186.0 bits (471), Expect = 8.6e-44
Identity = 105/115 (91.30%), Postives = 108/115 (93.91%), Query Frame = 0


Query: 1   MKVVAAYLLAVLGGNKTPSAQDINTILSSVGAEAEVEKIELLLAEIKGKDITELIACGRQ 60
           MKVVAAYLLAVLGGNKTPSAQDINTIL SVGAEA+VEKIELLLAE+KGKDITELIACGR+
Sbjct: 1   MKVVAAYLLAVLGGNKTPSAQDINTILYSVGAEADVEKIELLLAEVKGKDITELIACGRE 60

Query: 61  KMASLPTAPVVAAAVPAAPSTVDAAAPVAAEAKIEEKDDAMDSDEDICFSLFEDE 116
           KMASLPT  VVAA V A PSTVDAAAPVAAEAK EEKDDAMDSDEDICFSLFEDE
Sbjct: 61  KMASLPTGAVVAAVVAAVPSTVDAAAPVAAEAKKEEKDDAMDSDEDICFSLFEDE 115

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BLAST of PI0019036 vs. ExPASy TrEMBL
Match: A0A0A0KEV8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G451480 PE=3 SV=1)

HSP 1 Score: 172.9 bits (437), Expect = 7.5e-40
Identity = 99/112 (88.39%), Postives = 102/112 (91.07%), Query Frame = 0


Query: 4   VAAYLLAVLGGNKTPSAQDINTILSSVGAEAEVEKIELLLAEIKGKDITELIACGRQKMA 63
           VAAYLLAVLGGNKTPSAQDI TILSSVGAEAEVEKIELL+AE+KGKDITELIA  R+KMA
Sbjct: 25  VAAYLLAVLGGNKTPSAQDITTILSSVGAEAEVEKIELLIAELKGKDITELIAYAREKMA 84

Query: 64  SLPTAPVVAAAVPAAPSTVDAAAPVAAEAKIEEKDDAMDSDEDICFSLFEDE 116
           SLPT  VVAAAV A PSTVD AAPV AEAK EEKDDAMDSDEDICFSLFEDE
Sbjct: 85  SLPTGAVVAAAVAAVPSTVDTAAPVGAEAKKEEKDDAMDSDEDICFSLFEDE 136

[Close]

BLAST of PI0019036 vs. ExPASy TrEMBL
Match: A0A5A7SLD3 (60S acidic ribosomal protein P2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold202G001160 PE=3 SV=1)

HSP 1 Score: 137.1 bits (344), Expect = 4.6e-29
Identity = 77/89 (86.52%), Postives = 82/89 (92.13%), Query Frame = 0


Query: 27  LSSVGAEAEVEKIELLLAEIKGKDITELIACGRQKMASLPTAPVVAAAVPAAPSTVDAAA 86
           + +VGAEA+VEKIELLLAE+KGKDITELIACGR+KMASLPT  VVAA V A PSTVDAAA
Sbjct: 4   ICTVGAEADVEKIELLLAEVKGKDITELIACGREKMASLPTGAVVAAVVAAVPSTVDAAA 63

Query: 87  PVAAEAKIEEKDDAMDSDEDICFSLFEDE 116
           PVAAEAK EEKDDAMDSDEDICFSLFEDE
Sbjct: 64  PVAAEAKKEEKDDAMDSDEDICFSLFEDE 92

[Close]

BLAST of PI0019036 vs. ExPASy TrEMBL
Match: A0A6J1CPQ6 (60S acidic ribosomal protein P2-2-like OS=Momordica charantia OX=3673 GN=LOC111013605 PE=3 SV=1)

HSP 1 Score: 127.9 bits (320), Expect = 2.8e-26
Identity = 78/120 (65.00%), Postives = 95/120 (79.17%), Query Frame = 0


Query: 1   MKVVAAYLLAVLGGNKTPSAQDINTILSSVGAEAEVEKIELLLAEIKGKDITELIACGRQ 60
           MKVVAAYLLAVLGGN +P+A+DI TIL+SVGAEAE EKIELLL+++KGKDI E++ACGR+
Sbjct: 1   MKVVAAYLLAVLGGNTSPTARDIRTILASVGAEAEDEKIELLLSQVKGKDIAEVVACGRE 60

Query: 61  KMASLPTAPVVAAAV-----PAAPSTVDAAAPVAAEAKIEE-KDDAMDSDEDICFSLFED 115
           KMASLP   VVAAAV         ++   AA  AAEAK EE K+D  DSD+DICF+LF++
Sbjct: 61  KMASLPARGVVAAAVGVLTAGGGDASAATAALAAAEAKKEEKKEDVEDSDDDICFTLFDE 120

[Close]

BLAST of PI0019036 vs. ExPASy TrEMBL
Match: A0A5D2MD03 (Uncharacterized protein OS=Gossypium tomentosum OX=34277 GN=ES332_D01G254200v1 PE=3 SV=1)

HSP 1 Score: 120.6 bits (301), Expect = 4.4e-24
Identity = 73/114 (64.04%), Postives = 89/114 (78.07%), Query Frame = 0


Query: 1   MKVVAAYLLAVLGGNKTPSAQDINTILSSVGAEAEVEKIELLLAEIKGKDITELIACGRQ 60
           MKVVAAYLLAVLGGN +PSA D+  IL SVGAEAE E+I+LLL+E+KGKDITELIA GR+
Sbjct: 1   MKVVAAYLLAVLGGNTSPSADDLKAILGSVGAEAEDERIQLLLSEVKGKDITELIASGRE 60

Query: 61  KMASLPTAPVVAAAVPAAPSTVDAAAPVAAEAKIEEK-DDAMDSDEDICFSLFE 114
           K+AS+P+     A   AAP    AAAP AAEAK EEK ++  +SD+D+ FSLF+
Sbjct: 61  KLASVPSGGGGVAVAAAAPGAGAAAAPAAAEAKKEEKVEEKEESDDDMGFSLFD 114

[Close]

BLAST of PI0019036 vs. NCBI nr
Match: XP_016902906.1 (PREDICTED: 60S acidic ribosomal protein P2-like [Cucumis melo])

HSP 1 Score: 186.0 bits (471), Expect = 1.8e-43
Identity = 105/115 (91.30%), Postives = 108/115 (93.91%), Query Frame = 0


Query: 1   MKVVAAYLLAVLGGNKTPSAQDINTILSSVGAEAEVEKIELLLAEIKGKDITELIACGRQ 60
           MKVVAAYLLAVLGGNKTPSAQDINTIL SVGAEA+VEKIELLLAE+KGKDITELIACGR+
Sbjct: 1   MKVVAAYLLAVLGGNKTPSAQDINTILYSVGAEADVEKIELLLAEVKGKDITELIACGRE 60

Query: 61  KMASLPTAPVVAAAVPAAPSTVDAAAPVAAEAKIEEKDDAMDSDEDICFSLFEDE 116
           KMASLPT  VVAA V A PSTVDAAAPVAAEAK EEKDDAMDSDEDICFSLFEDE
Sbjct: 61  KMASLPTGAVVAAVVAAVPSTVDAAAPVAAEAKKEEKDDAMDSDEDICFSLFEDE 115

[Close]

BLAST of PI0019036 vs. NCBI nr
Match: XP_004143377.1 (60S acidic ribosomal protein P2 [Cucumis sativus] >XP_031743701.1 60S acidic ribosomal protein P2 [Cucumis sativus] >KGN48245.1 hypothetical protein Csa_002919 [Cucumis sativus])

HSP 1 Score: 172.9 bits (437), Expect = 1.6e-39
Identity = 99/112 (88.39%), Postives = 102/112 (91.07%), Query Frame = 0


Query: 4   VAAYLLAVLGGNKTPSAQDINTILSSVGAEAEVEKIELLLAEIKGKDITELIACGRQKMA 63
           VAAYLLAVLGGNKTPSAQDI TILSSVGAEAEVEKIELL+AE+KGKDITELIA  R+KMA
Sbjct: 25  VAAYLLAVLGGNKTPSAQDITTILSSVGAEAEVEKIELLIAELKGKDITELIAYAREKMA 84

Query: 64  SLPTAPVVAAAVPAAPSTVDAAAPVAAEAKIEEKDDAMDSDEDICFSLFEDE 116
           SLPT  VVAAAV A PSTVD AAPV AEAK EEKDDAMDSDEDICFSLFEDE
Sbjct: 85  SLPTGAVVAAAVAAVPSTVDTAAPVGAEAKKEEKDDAMDSDEDICFSLFEDE 136

[Close]

BLAST of PI0019036 vs. NCBI nr
Match: KAA0025275.1 (60S acidic ribosomal protein P2-like [Cucumis melo var. makuwa] >TYK07392.1 60S acidic ribosomal protein P2-like [Cucumis melo var. makuwa])

HSP 1 Score: 137.1 bits (344), Expect = 9.5e-29
Identity = 77/89 (86.52%), Postives = 82/89 (92.13%), Query Frame = 0


Query: 27  LSSVGAEAEVEKIELLLAEIKGKDITELIACGRQKMASLPTAPVVAAAVPAAPSTVDAAA 86
           + +VGAEA+VEKIELLLAE+KGKDITELIACGR+KMASLPT  VVAA V A PSTVDAAA
Sbjct: 4   ICTVGAEADVEKIELLLAEVKGKDITELIACGREKMASLPTGAVVAAVVAAVPSTVDAAA 63

Query: 87  PVAAEAKIEEKDDAMDSDEDICFSLFEDE 116
           PVAAEAK EEKDDAMDSDEDICFSLFEDE
Sbjct: 64  PVAAEAKKEEKDDAMDSDEDICFSLFEDE 92

[Close]

BLAST of PI0019036 vs. NCBI nr
Match: XP_022143770.1 (60S acidic ribosomal protein P2-2-like [Momordica charantia])

HSP 1 Score: 127.9 bits (320), Expect = 5.7e-26
Identity = 78/120 (65.00%), Postives = 95/120 (79.17%), Query Frame = 0


Query: 1   MKVVAAYLLAVLGGNKTPSAQDINTILSSVGAEAEVEKIELLLAEIKGKDITELIACGRQ 60
           MKVVAAYLLAVLGGN +P+A+DI TIL+SVGAEAE EKIELLL+++KGKDI E++ACGR+
Sbjct: 1   MKVVAAYLLAVLGGNTSPTARDIRTILASVGAEAEDEKIELLLSQVKGKDIAEVVACGRE 60

Query: 61  KMASLPTAPVVAAAV-----PAAPSTVDAAAPVAAEAKIEE-KDDAMDSDEDICFSLFED 115
           KMASLP   VVAAAV         ++   AA  AAEAK EE K+D  DSD+DICF+LF++
Sbjct: 61  KMASLPARGVVAAAVGVLTAGGGDASAATAALAAAEAKKEEKKEDVEDSDDDICFTLFDE 120

[Close]

BLAST of PI0019036 vs. NCBI nr
Match: XP_017248547.1 (PREDICTED: 60S acidic ribosomal protein P2-like [Daucus carota subsp. sativus])

HSP 1 Score: 122.9 bits (307), Expect = 1.8e-24
Identity = 74/114 (64.91%), Postives = 92/114 (80.70%), Query Frame = 0


Query: 1   MKVVAAYLLAVLGGNKTPSAQDINTILSSVGAEAEVEKIELLLAEIKGKDITELIACGRQ 60
           MKV+AAYLLAVLGGN +P+A DI  IL SVGAEAE ++IELLL+++KGKDITELIA GR+
Sbjct: 1   MKVIAAYLLAVLGGNTSPTADDIKNILGSVGAEAEDDRIELLLSQVKGKDITELIASGRE 60

Query: 61  KMASLPTAPVVAAAVPAAPSTVDAAAPVAAEAKIEEK-DDAMDSDEDICFSLFE 114
           K+AS+P+    A AV AAP+T  AA P AAEAK EEK +D  +SD+D+C SLF+
Sbjct: 61  KLASVPSGGAGAVAV-AAPATGGAAPPAAAEAKKEEKAEDEGESDDDMCLSLFD 113

[Close]

BLAST of PI0019036 vs. TAIR 10
Match: AT3G44590.2 (60S acidic ribosomal protein family )

HSP 1 Score: 99.8 bits (247), Expect = 1.6e-21
Identity = 62/113 (54.87%), Postives = 80/113 (70.80%), Query Frame = 0


Query: 1   MKVVAAYLLAVLGGNKTPSAQDINTILSSVGAEAEVEKIELLLAEIKGKDITELIACGRQ 60
           MKV AA+LLAVLGGN  PSA +I  I+ +VGA+ + E IELLL E+ GKDI ELIA GR+
Sbjct: 1   MKVAAAFLLAVLGGNANPSADNIKDIIGAVGADVDGESIELLLKEVSGKDIAELIASGRE 60

Query: 61  KMASLPTAPVVAAAVPAAPSTVDAAAPVAAEAKIEEKDDAMDSDEDICFSLFE 114
           K+AS+P+   V  AV AAPS+    A   AE K  +K++  +SD+D+ FSLFE
Sbjct: 61  KLASVPSGGGV--AVSAAPSSGGGGAAAPAEKKEAKKEEKEESDDDMGFSLFE 111

[Close]

BLAST of PI0019036 vs. TAIR 10
Match: AT3G44590.1 (60S acidic ribosomal protein family )

HSP 1 Score: 99.8 bits (247), Expect = 1.6e-21
Identity = 62/113 (54.87%), Postives = 80/113 (70.80%), Query Frame = 0


Query: 1   MKVVAAYLLAVLGGNKTPSAQDINTILSSVGAEAEVEKIELLLAEIKGKDITELIACGRQ 60
           MKV AA+LLAVLGGN  PSA +I  I+ +VGA+ + E IELLL E+ GKDI ELIA GR+
Sbjct: 1   MKVAAAFLLAVLGGNANPSADNIKDIIGAVGADVDGESIELLLKEVSGKDIAELIASGRE 60

Query: 61  KMASLPTAPVVAAAVPAAPSTVDAAAPVAAEAKIEEKDDAMDSDEDICFSLFE 114
           K+AS+P+   V  AV AAPS+    A   AE K  +K++  +SD+D+ FSLFE
Sbjct: 61  KLASVPSGGGV--AVSAAPSSGGGGAAAPAEKKEAKKEEKEESDDDMGFSLFE 111

[Close]

BLAST of PI0019036 vs. TAIR 10
Match: AT2G27710.1 (60S acidic ribosomal protein family )

HSP 1 Score: 95.9 bits (237), Expect = 2.3e-20
Identity = 62/115 (53.91%), Postives = 79/115 (68.70%), Query Frame = 0


Query: 1   MKVVAAYLLAVLGGNKTPSAQDINTILSSVGAEAEVEKIELLLAEIKGKDITELIACGRQ 60
           MKVVAAYLLAVL G  +P++ DI TIL SVGAE E  +IELLL E+KGKD+ ELIA GR+
Sbjct: 1   MKVVAAYLLAVLSGKASPTSADIKTILGSVGAETEDSQIELLLKEVKGKDLAELIAAGRE 60

Query: 61  KMASLPTAPVVAAAVPAAPS--TVDAAAPVAAEAKIEEKDDAMDSDEDICFSLFE 114
           K+AS+P+      AV +A S       A  A   K E+K++  +SD+D+ FSLFE
Sbjct: 61  KLASVPSGGGGGVAVASATSGGGGGGGASAAESKKEEKKEEKEESDDDMGFSLFE 115

[Close]

BLAST of PI0019036 vs. TAIR 10
Match: AT2G27710.2 (60S acidic ribosomal protein family )

HSP 1 Score: 95.9 bits (237), Expect = 2.3e-20
Identity = 62/115 (53.91%), Postives = 79/115 (68.70%), Query Frame = 0


Query: 1   MKVVAAYLLAVLGGNKTPSAQDINTILSSVGAEAEVEKIELLLAEIKGKDITELIACGRQ 60
           MKVVAAYLLAVL G  +P++ DI TIL SVGAE E  +IELLL E+KGKD+ ELIA GR+
Sbjct: 1   MKVVAAYLLAVLSGKASPTSADIKTILGSVGAETEDSQIELLLKEVKGKDLAELIAAGRE 60

Query: 61  KMASLPTAPVVAAAVPAAPS--TVDAAAPVAAEAKIEEKDDAMDSDEDICFSLFE 114
           K+AS+P+      AV +A S       A  A   K E+K++  +SD+D+ FSLFE
Sbjct: 61  KLASVPSGGGGGVAVASATSGGGGGGGASAAESKKEEKKEEKEESDDDMGFSLFE 115

[Close]

BLAST of PI0019036 vs. TAIR 10
Match: AT2G27710.3 (60S acidic ribosomal protein family )

HSP 1 Score: 95.9 bits (237), Expect = 2.3e-20
Identity = 62/115 (53.91%), Postives = 79/115 (68.70%), Query Frame = 0


Query: 1   MKVVAAYLLAVLGGNKTPSAQDINTILSSVGAEAEVEKIELLLAEIKGKDITELIACGRQ 60
           MKVVAAYLLAVL G  +P++ DI TIL SVGAE E  +IELLL E+KGKD+ ELIA GR+
Sbjct: 1   MKVVAAYLLAVLSGKASPTSADIKTILGSVGAETEDSQIELLLKEVKGKDLAELIAAGRE 60

Query: 61  KMASLPTAPVVAAAVPAAPS--TVDAAAPVAAEAKIEEKDDAMDSDEDICFSLFE 114
           K+AS+P+      AV +A S       A  A   K E+K++  +SD+D+ FSLFE
Sbjct: 61  KLASVPSGGGGGVAVASATSGGGGGGGASAAESKKEEKKEEKEESDDDMGFSLFE 115

The following BLAST results are available for this feature:

BLAST of PI0019036 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P41099	3.1e-22	55.26	60S acidic ribosomal protein P2 OS=Parthenium argentatum OX=35935 PE=3 SV=1	[more]
P46252	9.9e-21	58.97	60S acidic ribosomal protein P2A OS=Zea mays OX=4577 GN=RPP2A PE=1 SV=3	[more]
Q9LXM8	2.2e-20	54.87	60S acidic ribosomal protein P2-4 OS=Arabidopsis thaliana OX=3702 GN=RPP2D PE=3 ...	[more]
O24415	6.4e-20	53.91	60S acidic ribosomal protein P2B OS=Zea mays OX=4577 GN=RPP2B PE=1 SV=1	[more]
O14317	2.4e-19	50.44	60S acidic ribosomal protein P2-C OS=Schizosaccharomyces pombe (strain 972 / ATC...	[more]

BLAST of PI0019036 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S4E3U5	8.6e-44	91.30	60S acidic ribosomal protein P2-like OS=Cucumis melo OX=3656 GN=LOC103500881 PE=...	[more]
A0A0A0KEV8	7.5e-40	88.39	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G451480 PE=3 SV=1	[more]
A0A5A7SLD3	4.6e-29	86.52	60S acidic ribosomal protein P2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E...	[more]
A0A6J1CPQ6	2.8e-26	65.00	60S acidic ribosomal protein P2-2-like OS=Momordica charantia OX=3673 GN=LOC1110...	[more]
A0A5D2MD03	4.4e-24	64.04	Uncharacterized protein OS=Gossypium tomentosum OX=34277 GN=ES332_D01G254200v1 P...	[more]

BLAST of PI0019036 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_016902906.1	1.8e-43	91.30	PREDICTED: 60S acidic ribosomal protein P2-like [Cucumis melo]	[more]
XP_004143377.1	1.6e-39	88.39	60S acidic ribosomal protein P2 [Cucumis sativus] >XP_031743701.1 60S acidic rib...	[more]
KAA0025275.1	9.5e-29	86.52	60S acidic ribosomal protein P2-like [Cucumis melo var. makuwa] >TYK07392.1 60S ...	[more]
XP_022143770.1	5.7e-26	65.00	60S acidic ribosomal protein P2-2-like [Momordica charantia]	[more]
XP_017248547.1	1.8e-24	64.91	PREDICTED: 60S acidic ribosomal protein P2-like [Daucus carota subsp. sativus]	[more]

BLAST of PI0019036 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G44590.2	1.6e-21	54.87	60S acidic ribosomal protein family	[more]
AT3G44590.1	1.6e-21	54.87	60S acidic ribosomal protein family	[more]
AT2G27710.1	2.3e-20	53.91	60S acidic ribosomal protein family	[more]
AT2G27710.2	2.3e-20	53.91	60S acidic ribosomal protein family	[more]
AT2G27710.3	2.3e-20	53.91	60S acidic ribosomal protein family	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PFAM	PF00428	Ribosomal_60s	coord: 18..112 e-value: 4.6E-17 score: 62.4
None	No IPR available	PANTHER	PTHR21141:SF96	60S ACIDIC RIBOSOMAL PROTEIN P2B	coord: 1..112
IPR038716	Ribosomal protein P1/P2, N-terminal domain	GENE3D	1.10.10.1410		coord: 1..58 e-value: 2.8E-24 score: 87.0
IPR044076	Ribosomal protein P2	PANTHER	PTHR21141	60S ACIDIC RIBOSOMAL PROTEIN FAMILY MEMBER	coord: 1..112
IPR044076	Ribosomal protein P2	CDD	cd05833	Ribosomal_P2	coord: 1..113 e-value: 2.8537E-28 score: 97.334
IPR027534	Ribosomal protein L12/P1/P2 family	HAMAP	MF_01478	Ribosomal_L12_arch	coord: 2..113 score: 13.403129

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0019036.1	PI0019036.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0002182	cytoplasmic translational elongation
biological_process	GO:0006414	translational elongation
cellular_component	GO:0022625	cytosolic large ribosomal subunit
cellular_component	GO:0005840	ribosome
molecular_function	GO:0003735	structural constituent of ribosome