PI0018980 (gene) Melon (PI 482460) v1

Overview


Name	PI0018980
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	Unknown protein
Location	chr04: 21928268 .. 21928582 (-)
RNA-Seq Expression	PI0018980
Synteny	PI0018980

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAATTTCCTAAGGGCGCTATGCCCTTCCCTTCCACTGTTGAAGCCCTCTGCCTGAAGATCATCCCTTCGCTCAGCGCCATCCCTCAGATCAGCATTTCAGGTGGCCTTTGCAACCAAATGGCTTTAAATCGAATGATCACGCTCCATGCACATAAGAAAGTAAAGAGGTGTTTAAAGACACTTGGCAATGAAGAAGATGAGGAAGAAGGTAAGCTACAAGTAGAAACTTTGAAGAGGAAAGCCCGAGTGGCCACATCAACCTCCAAACTGTCTGTCAAACAGTTAAAGGTTGATGCAAGCACTGATTCTTAG

mRNA sequence

ATGGAATTTCCTAAGGGCGCTATGCCCTTCCCTTCCACTGTTGAAGCCCTCTGCCTGAAGATCATCCCTTCGCTCAGCGCCATCCCTCAGATCAGCATTTCAGGTGGCCTTTGCAACCAAATGGCTTTAAATCGAATGATCACGCTCCATGCACATAAGAAAGTAAAGAGGTGTTTAAAGACACTTGGCAATGAAGAAGATGAGGAAGAAGGTAAGCTACAAGTAGAAACTTTGAAGAGGAAAGCCCGAGTGGCCACATCAACCTCCAAACTGTCTGTCAAACAGTTAAAGGTTGATGCAAGCACTGATTCTTAG

Coding sequence (CDS)

ATGGAATTTCCTAAGGGCGCTATGCCCTTCCCTTCCACTGTTGAAGCCCTCTGCCTGAAGATCATCCCTTCGCTCAGCGCCATCCCTCAGATCAGCATTTCAGGTGGCCTTTGCAACCAAATGGCTTTAAATCGAATGATCACGCTCCATGCACATAAGAAAGTAAAGAGGTGTTTAAAGACACTTGGCAATGAAGAAGATGAGGAAGAAGGTAAGCTACAAGTAGAAACTTTGAAGAGGAAAGCCCGAGTGGCCACATCAACCTCCAAACTGTCTGTCAAACAGTTAAAGGTTGATGCAAGCACTGATTCTTAG

Protein sequence

MEFPKGAMPFPSTVEALCLKIIPSLSAIPQISISGGLCNQMALNRMITLHAHKKVKRCLKTLGNEEDEEEGKLQVETLKRKARVATSTSKLSVKQLKVDASTDS

Homology

[Close]

BLAST of PI0018980 vs. ExPASy TrEMBL
Match: A0A5A7TGV6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold306G00400 PE=4 SV=1)

HSP 1 Score: 82.4 bits (202), Expect = 1.2e-12
Identity = 48/105 (45.71%), Postives = 67/105 (63.81%), Query Frame = 0


Query: 1   MEFPKGAMPFPSTVEALCLKIIPSLSAIPQISISGGLCNQMALNRMITLHAHKKVKRCLK 60
           ME PKG  PFP T+E LCLK IPSL  +PQ ++  G C+   LNR+IT + +K+ +RC+K
Sbjct: 9   MEHPKGVKPFPKTMEKLCLKYIPSLKELPQENMVEGRCSLAGLNRVITFYQNKEEERCIK 68

Query: 61  TLGNEEDEEEGKLQVE----TLKRKARVATSTSKLSVKQLKVDAS 102
           TLG ++ EE+ +        +LKRK R   STS   +K  KVD++
Sbjct: 69  TLGKKKLEEDSEGDTSPPPPSLKRKGR---STSSPPIKNAKVDSA 110

[Close]

BLAST of PI0018980 vs. ExPASy TrEMBL
Match: A0A5A7SLS8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold409G00080 PE=4 SV=1)

HSP 1 Score: 73.6 bits (179), Expect = 5.6e-10
Identity = 50/105 (47.62%), Postives = 65/105 (61.90%), Query Frame = 0


Query: 1   MEFPKGAMPFPSTVEALCLKIIPSLSAIPQISISGGLCNQMALNRMITLHAHKKVKRCLK 60
           M+ P+G MPFPST+EALCLK +P L A  Q  I G + +Q  LN+ ITLH +K+ +R LK
Sbjct: 26  MKTPQGIMPFPSTIEALCLKAVPKLLAFSQAPIFGSVSSQATLNQTITLHQNKEEERHLK 85

Query: 61  TLGN-EEDEEEGKL--QVETLKR-KARVATSTSKLSVKQLKVDAS 102
           TL   + +EEE  L      LKR KA    S+SK   K+ K DA+
Sbjct: 86  TLNKVKGEEEEASLPPPPSPLKRKKAHDNASSSKKKEKRWKQDAT 130

[Close]

BLAST of PI0018980 vs. ExPASy TrEMBL
Match: A0A5A7UUR1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold279G00010 PE=4 SV=1)

HSP 1 Score: 72.4 bits (176), Expect = 1.3e-09
Identity = 46/104 (44.23%), Postives = 61/104 (58.65%), Query Frame = 0


Query: 1   MEFPKGAMPFPSTVEALCLKIIPSLSAIPQISISGGLCNQMALNRMITLHAHKKVKRCLK 60
           ME PK  MPFP T++ALCLK +P LS   Q  IS G+C Q  LN+ I LH +K+ +RC+K
Sbjct: 40  MEAPKDIMPFPFTIKALCLKAVPELSTFLQAPISDGVCFQATLNQTIMLHQNKEEERCIK 99

Query: 61  TLGN-EEDEEEGKLQVETLKRKARVATSTSKLSVKQLKVDASTD 104
           TL   + +EEE       LKRK +   S   L  K  +++A  D
Sbjct: 100 TLNKVKGEEEEASSPPPPLKRK-KSHDSVFSLQKKGKEMEARHD 142

[Close]

BLAST of PI0018980 vs. ExPASy TrEMBL
Match: A0A5D3E1R7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold216G00150 PE=4 SV=1)

HSP 1 Score: 72.4 bits (176), Expect = 1.3e-09
Identity = 41/82 (50.00%), Postives = 51/82 (62.20%), Query Frame = 0


Query: 1   MEFPKGAMPFPSTVEALCLKIIPSLSAIPQISISGGLCNQMALNRMITLHAHKKVKRCLK 60
           ME PK  MPFP T++ALCLK +P LS   Q  IS  +C+Q  LN+ I LH +K+ +RCLK
Sbjct: 26  MEAPKDIMPFPFTIKALCLKEVPELSTFSQAPISSFVCSQATLNQTIMLHQNKEEQRCLK 85

Query: 61  TLGNEEDEE-EGKLQVETLKRK 82
           TL   + EE E       LKRK
Sbjct: 86  TLNKVKGEEKEASPPPPPLKRK 107

[Close]

BLAST of PI0018980 vs. ExPASy TrEMBL
Match: A0A5A7UQF9 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold280G002190 PE=4 SV=1)

HSP 1 Score: 72.4 bits (176), Expect = 1.3e-09
Identity = 47/104 (45.19%), Postives = 61/104 (58.65%), Query Frame = 0


Query: 1   MEFPKGAMPFPSTVEALCLKIIPSLSAIPQISISGGLCNQMALNRMITLHAHKKVKRCLK 60
           ME PK  MPFP T++ALCLK +P LS   Q  IS  +C+Q  LN+ I LH +K+ +RCLK
Sbjct: 26  MEAPKDIMPFPFTIKALCLKEVPELSTFSQAPISSFVCSQATLNQTIMLHQNKEEQRCLK 85

Query: 61  TLGNEEDEE-EGKLQVETLKRKARVATSTSKLSVKQLKVDASTD 104
           TL   + EE E       LKRK +   S S L  K  +++A  D
Sbjct: 86  TLNKVKGEEKEASPPPPPLKRK-KSHDSASSLQKKGKEMEARHD 128

[Close]

BLAST of PI0018980 vs. NCBI nr
Match: KAA0040817.1 (hypothetical protein E6C27_scaffold333G00350 [Cucumis melo var. makuwa] >TYK17794.1 hypothetical protein E5676_scaffold306G00400 [Cucumis melo var. makuwa])

HSP 1 Score: 82.4 bits (202), Expect = 2.5e-12
Identity = 48/105 (45.71%), Postives = 67/105 (63.81%), Query Frame = 0


Query: 1   MEFPKGAMPFPSTVEALCLKIIPSLSAIPQISISGGLCNQMALNRMITLHAHKKVKRCLK 60
           ME PKG  PFP T+E LCLK IPSL  +PQ ++  G C+   LNR+IT + +K+ +RC+K
Sbjct: 9   MEHPKGVKPFPKTMEKLCLKYIPSLKELPQENMVEGRCSLAGLNRVITFYQNKEEERCIK 68

Query: 61  TLGNEEDEEEGKLQVE----TLKRKARVATSTSKLSVKQLKVDAS 102
           TLG ++ EE+ +        +LKRK R   STS   +K  KVD++
Sbjct: 69  TLGKKKLEEDSEGDTSPPPPSLKRKGR---STSSPPIKNAKVDSA 110

[Close]

BLAST of PI0018980 vs. NCBI nr
Match: KAA0031700.1 (hypothetical protein E6C27_scaffold139G004840 [Cucumis melo var. makuwa] >TYK04412.1 hypothetical protein E5676_scaffold409G00080 [Cucumis melo var. makuwa])

HSP 1 Score: 73.6 bits (179), Expect = 1.2e-09
Identity = 50/105 (47.62%), Postives = 65/105 (61.90%), Query Frame = 0


Query: 1   MEFPKGAMPFPSTVEALCLKIIPSLSAIPQISISGGLCNQMALNRMITLHAHKKVKRCLK 60
           M+ P+G MPFPST+EALCLK +P L A  Q  I G + +Q  LN+ ITLH +K+ +R LK
Sbjct: 26  MKTPQGIMPFPSTIEALCLKAVPKLLAFSQAPIFGSVSSQATLNQTITLHQNKEEERHLK 85

Query: 61  TLGN-EEDEEEGKL--QVETLKR-KARVATSTSKLSVKQLKVDAS 102
           TL   + +EEE  L      LKR KA    S+SK   K+ K DA+
Sbjct: 86  TLNKVKGEEEEASLPPPPSPLKRKKAHDNASSSKKKEKRWKQDAT 130

[Close]

BLAST of PI0018980 vs. NCBI nr
Match: KAA0057279.1 (hypothetical protein E6C27_scaffold280G001200 [Cucumis melo var. makuwa] >TYK27636.1 hypothetical protein E5676_scaffold279G00010 [Cucumis melo var. makuwa])

HSP 1 Score: 72.4 bits (176), Expect = 2.6e-09
Identity = 46/104 (44.23%), Postives = 61/104 (58.65%), Query Frame = 0


Query: 1   MEFPKGAMPFPSTVEALCLKIIPSLSAIPQISISGGLCNQMALNRMITLHAHKKVKRCLK 60
           ME PK  MPFP T++ALCLK +P LS   Q  IS G+C Q  LN+ I LH +K+ +RC+K
Sbjct: 40  MEAPKDIMPFPFTIKALCLKAVPELSTFLQAPISDGVCFQATLNQTIMLHQNKEEERCIK 99

Query: 61  TLGN-EEDEEEGKLQVETLKRKARVATSTSKLSVKQLKVDASTD 104
           TL   + +EEE       LKRK +   S   L  K  +++A  D
Sbjct: 100 TLNKVKGEEEEASSPPPPLKRK-KSHDSVFSLQKKGKEMEARHD 142

[Close]

BLAST of PI0018980 vs. NCBI nr
Match: TYK30047.1 (hypothetical protein E5676_scaffold216G00150 [Cucumis melo var. makuwa])

HSP 1 Score: 72.4 bits (176), Expect = 2.6e-09
Identity = 41/82 (50.00%), Postives = 51/82 (62.20%), Query Frame = 0


Query: 1   MEFPKGAMPFPSTVEALCLKIIPSLSAIPQISISGGLCNQMALNRMITLHAHKKVKRCLK 60
           ME PK  MPFP T++ALCLK +P LS   Q  IS  +C+Q  LN+ I LH +K+ +RCLK
Sbjct: 26  MEAPKDIMPFPFTIKALCLKEVPELSTFSQAPISSFVCSQATLNQTIMLHQNKEEQRCLK 85

Query: 61  TLGNEEDEE-EGKLQVETLKRK 82
           TL   + EE E       LKRK
Sbjct: 86  TLNKVKGEEKEASPPPPPLKRK 107

[Close]

BLAST of PI0018980 vs. NCBI nr
Match: KAA0057358.1 (hypothetical protein E6C27_scaffold280G002190 [Cucumis melo var. makuwa])

HSP 1 Score: 72.4 bits (176), Expect = 2.6e-09
Identity = 47/104 (45.19%), Postives = 61/104 (58.65%), Query Frame = 0


Query: 1   MEFPKGAMPFPSTVEALCLKIIPSLSAIPQISISGGLCNQMALNRMITLHAHKKVKRCLK 60
           ME PK  MPFP T++ALCLK +P LS   Q  IS  +C+Q  LN+ I LH +K+ +RCLK
Sbjct: 26  MEAPKDIMPFPFTIKALCLKEVPELSTFSQAPISSFVCSQATLNQTIMLHQNKEEQRCLK 85

Query: 61  TLGNEEDEE-EGKLQVETLKRKARVATSTSKLSVKQLKVDASTD 104
           TL   + EE E       LKRK +   S S L  K  +++A  D
Sbjct: 86  TLNKVKGEEKEASPPPPPLKRK-KSHDSASSLQKKGKEMEARHD 128

The following BLAST results are available for this feature:

BLAST of PI0018980 vs.


Match Name	E-value	Identity	Description

BLAST of PI0018980 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TGV6	1.2e-12	45.71	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5A7SLS8	5.6e-10	47.62	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5A7UUR1	1.3e-09	44.23	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5D3E1R7	1.3e-09	50.00	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5A7UQF9	1.3e-09	45.19	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]

BLAST of PI0018980 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0040817.1	2.5e-12	45.71	hypothetical protein E6C27_scaffold333G00350 [Cucumis melo var. makuwa] >TYK1779...	[more]
KAA0031700.1	1.2e-09	47.62	hypothetical protein E6C27_scaffold139G004840 [Cucumis melo var. makuwa] >TYK044...	[more]
KAA0057279.1	2.6e-09	44.23	hypothetical protein E6C27_scaffold280G001200 [Cucumis melo var. makuwa] >TYK276...	[more]
TYK30047.1	2.6e-09	50.00	hypothetical protein E5676_scaffold216G00150 [Cucumis melo var. makuwa]	[more]
KAA0057358.1	2.6e-09	45.19	hypothetical protein E6C27_scaffold280G002190 [Cucumis melo var. makuwa]	[more]

BLAST of PI0018980 vs. NCBI nr


Match Name	E-value	Identity	Description

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0018980.1	PI0018980.1	mRNA