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Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. ATGGAAAACAGAGGAAAGTGGGAGAAGGAAAAAGAAGAAGAAAAGTATGTGTACAATGTAAAGGTACAGCTAAGTACGGAAAAAGATATGGAGCCCACGAGGGTGTTGGTGCTAATGCTACTCAGCACTCTGCACTCACTAAGAAAAAAGGTATTTATTTGGTTTTTTTTTTTTTCTTTTCTTTTTCTTTAACTTTCAACTTCTGTAGAAAAATGCTTACAAGATATGATTTGGTTGTTTGTTTGTTTATTTGTTTATTTCTTTTTGGGAGTGTCCAGATTCAATCTTATGAACTGGAATTGTGAATTTGAGATAGCAACAAAGGAGAGAGCAAAAGAGGCTGCGGCTGTATGCCGTGTGGGATTAGGATTATTAACAAATTGCTGTGAGTGCCGTCCATTTGGCTTCACTCTTTTGTTGACTTTACCATCTGTAGATGAAAACCGAGGTTGGGATTGCAGTTGTAGTGAAGTGAGTAACAAAATCAAGTGCTTCGGAGTATAGTGAATCCTGATATCTATCTCGATTTAGGAAGTGGCAAGTTGTTGTTGGGAGAAATGAGTATGAGATGGAAAGGATAGATAGAGGGGGAAAGTGGGTGGAAGAAAGTGAAAGGTAAAGGGAGGAAGAAGAGGCCCAGTTGCTAAATGGGCCACACCAGACTCAGGGTCAGGGGCAGAACAACGGACGCCACCTTGGGTTGGCTGGCTCCCAATAA mRNA sequence ATGGAAAACAGAGGAAAGTGGGAGAAGGAAAAAGAAGAAGAAAAGTATGTGTACAATGTAAAGATAGCAACAAAGGAGAGAGCAAAAGAGGCTGCGGCTGTATGCCGTGTGGGATTAGGATTATTAACAAATTGCTGTGAGAAGTGGCAAGTTGTTGTTGGGAGAAATGAGTATGAGATGGAAAGGATAGATAGAGGGGGAAAGTGGGCCCAGTTGCTAAATGGGCCACACCAGACTCAGGGTCAGGGGCAGAACAACGGACGCCACCTTGGGTTGGCTGGCTCCCAATAA Coding sequence (CDS) ATGGAAAACAGAGGAAAGTGGGAGAAGGAAAAAGAAGAAGAAAAGTATGTGTACAATGTAAAGATAGCAACAAAGGAGAGAGCAAAAGAGGCTGCGGCTGTATGCCGTGTGGGATTAGGATTATTAACAAATTGCTGTGAGAAGTGGCAAGTTGTTGTTGGGAGAAATGAGTATGAGATGGAAAGGATAGATAGAGGGGGAAAGTGGGCCCAGTTGCTAAATGGGCCACACCAGACTCAGGGTCAGGGGCAGAACAACGGACGCCACCTTGGGTTGGCTGGCTCCCAATAA Protein sequence MENRGKWEKEKEEEKYVYNVKIATKERAKEAAAVCRVGLGLLTNCCEKWQVVVGRNEYEMERIDRGGKWAQLLNGPHQTQGQGQNNGRHLGLAGSQ
Homology
BLAST of PI0018880 vs. ExPASy TrEMBL
Match: A0A0A0KJV0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G497230 PE=4 SV=1) HSP 1 Score: 107.1 bits (266), Expect = 4.2e-20 Identity = 71/112 (63.39%), Postives = 76/112 (67.86%), Query Frame = 0
Query: 1 MENRGKWEK-EKEEEKYVYNVKIATKERAKEAAAVCR-VGLGLLTNCCEKWQVVVGRNEY 60
MENRGKWEK E+EEEKYVYNVKIATKERAKEAAAVC G+ ++ KWQ VVGRNEY
Sbjct: 1 MENRGKWEKEEEEEEKYVYNVKIATKERAKEAAAVCMPCGIRIIDKLL-KWQ-VVGRNEY 60
Query: 61 EMERIDR---GGKWAQL------LNGP-----HQTQGQGQNNGRHLGLAGSQ 97
EMERIDR GGKW + GP G G NNGRH GLAGSQ
Sbjct: 61 EMERIDRETEGGKWVEESERKGGRRGPVDKWATSDSGSGGNNGRHFGLAGSQ 110
BLAST of PI0018880 vs. NCBI nr
Match: KGN48672.1 (hypothetical protein Csa_003929 [Cucumis sativus]) HSP 1 Score: 107.1 bits (266), Expect = 8.8e-20 Identity = 71/112 (63.39%), Postives = 76/112 (67.86%), Query Frame = 0
Query: 1 MENRGKWEK-EKEEEKYVYNVKIATKERAKEAAAVCR-VGLGLLTNCCEKWQVVVGRNEY 60
MENRGKWEK E+EEEKYVYNVKIATKERAKEAAAVC G+ ++ KWQ VVGRNEY
Sbjct: 1 MENRGKWEKEEEEEEKYVYNVKIATKERAKEAAAVCMPCGIRIIDKLL-KWQ-VVGRNEY 60
Query: 61 EMERIDR---GGKWAQL------LNGP-----HQTQGQGQNNGRHLGLAGSQ 97
EMERIDR GGKW + GP G G NNGRH GLAGSQ
Sbjct: 61 EMERIDRETEGGKWVEESERKGGRRGPVDKWATSDSGSGGNNGRHFGLAGSQ 110
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
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| Match Name | E-value | Identity | Description | |
|---|
| A0A0A0KJV0 | 4.2e-20 | 63.39 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G497230 PE=4 SV=1 | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| KGN48672.1 | 8.8e-20 | 63.39 | hypothetical protein Csa_003929 [Cucumis sativus] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
InterPro
Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 75..96 |
Relationships
The following mRNA feature(s) are a part of this gene:
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