PI0018875 (gene) Melon (PI 482460) v1

Overview


Name	PI0018875
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	RNA-binding protein 48
Location	chr03: 105912 .. 110363 (+)
RNA-Seq Expression	PI0018875
Synteny	PI0018875

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTGGTTGCAACCCAAGCGTTTGTTTATAATTATGAAATTTTTTGTGTAGGTGCCGCAAATTCCACCTTTATCCATGGATCCCTTGTTCCTTCAATTTGAAACTCATTTTCCTGCTAAATCATGACAAAAATCCCAGGGAACGATCGGGAGAAGCATCTCGAGTTTGGACGCCGTAGCCTCAAGCAAAACATCTGATCTGAATTTGACGACAAATCCGACCCACAGGTCTAAAGGAGTTCCACGATCACAGCAGGATGCTATGTTCTCAATTTGTGAGTGAAACAACTAAAGTGCAACAACGACTGCAACTTAGAAAAAGGACGCTCAATCGGGAAGGCATTCAAGGGCATTCGAATCAGTTGAGGGTTTTGCCGGAACTCTCGTGTGCTTAATTTGTGATTGTGCCAATCGAGGTAACTAAATGGTTTAACTTTTCAAAAAAAAAAAAAAAAACAATTTTTTTTAAAACAACTATGGACAAATGTAGAAACAGGGCGGAGTTTGATTCGATAACTTGAAATCGGAAATCGGAAATCGAAATTGGGAGAAGACGGGTTGTTGGGGGATGCCTCGTTTTAGAGACGAGCCCCTTGCGGTTCGCGCCTATACAGTTTGCGATGAGTCAAGGTCCATTCCACCTCTGTTACTTCTCCTCCGCATGATCGAAGGAAGATCTATTTAGCTTGTTCATTTTGAAATTCAACAGGTATTTGATTGTGAGGAACGTTCCGGCATTGGGTTGTGGAGATGGCTTGCACAAACTGTTCTCCTCCTACGGGAACCTTGAAGAGTAACTTCAATTCTCGTTTCCCCTTCTTAATTCCCATACTTTCTTTTCTAATTCCTCAGATGGGATGATACTTTTTTACCGCTCTCTCATCACATGCTTCCCCCATGTTTGATTGGATTAGCTTCTCATAATTTTAATAACTCTCTCAGGTGTAAACCCATGGATGCAGAAGAATGTGATGAATTCACAGACGTTTATTTTGTCAAATTTCATTTGGTCACCAATGCCAGGTATTTGGACCTTTCTTCTGGTTTTTCTTTTGTTTCAAAGAATGCGTTATTGTGCCCCTGAGTTTGGACCATAACAATTTAACTTTCAGGTTTGCAAAAAGAAAATTGGACGAGTTTGTTTTCCTTGGTAATCGGCTCCAAGTCTCTTATGCGCCTGAGTTTGAAAGCTTGCTTGATACAAAGGAGAAGCTAGAAGTTAGGAGACGAGAAGTTTTAGCACGATTGGATTGTAAGTTACGCTTTGGCATATATATGTGTGTGTCCGCGTGTGTGTATGATAGGAAGATGTTGCTTTGGGTACATTTGGAAGGTATCAACTTAAAAATACACCACCACCCACGTTATAGTTAAGAAATGCTGTTTCCTTCCAATAGTTCATTTTTAAGCATGTAATAACTTTTTTATCAGCTGGCAGACCAAGAGGATCTGCAGTTAGTTCAACAACCGCAAAGCTTACAAATCCTTCTCGCGCTCATTATACTCTTGAACAGAAGAACTCTATTGAAAAGAGGTTTGAGCCAAATTAAAAAATTTGCAGTTGCTGCAAACTCGACAAGTTTGTTTAAACTTTCTCCATCCCTCTCTCTCTCTCTCTTTGGTAGGAATTATGGAGACGCAGCACTCATTTCCAATCCCCATGTTTCTCAAATAACAAGAGTTTCCTCTGACCAGGTTTGTTACCATAGCTGTTTTCCTTCCCTTTTCATGTCATCTTTTATGTTATAATAATTATTAACAATGCTAGGAAACAATTATTCTGTGTTCTTTTAGTTTAAGCTTCTCTTGTACACGTGATATTTGAACATAGTTCCACTGTGTGCTGCAATATGGGTGCAAGGAGTTCAATCCAACAGATTGCACGATTGTGTCAGGTACTTAAACACCTTGGAGAACCACATCCCAAAAGCTAGCTATTGAGGTGGGAGAGCCAAGCAATTTAAGTGCCACATTGATCATCCCATTCTAACCAATGTAGGACCAAGGCATACCATACTACCTTGGTTCATAATAGATTACTTTGAAAGGCCAATGCAATGTGATAGGTTGAAAGCACAAAATTAGGAAGCTAGATGATTCCTTTTTATTTGTTATGTTATTAGGCACAAAAATCCTGAAGCATTGGAGAAGTCTAGACTCTCCCAACCATCTCTGAAAATACTAGTCGGGGATATATTGGGAATCTTAGTCAGGATAGTAGAACGGGGATAGTGGTATTTAATTAGTGGTGTCGTGGTTATCAGTAAGGAGAATTGGGGATCTTAGAGGGGAAATGATTTTGGTATTATCCAGTGTAGGACTTTAGAGAGAGACACAGTCCCTCGAAAGGCTATAAATATTGAAATTTCTTTTGATATTGCAATATATTCCTATCATTGTGTTTTCTATTGATTTTTCCTTTGTTTCCTTGTACTTCCCTTGCCCTTTTACTAGTCCGTTCAAATAAACTAGTGGAGTGATCTGCAATCAACCTAGTCGTTTTTTATTTTATTTTATTTGACTCTTGTACACACCATATACACATACATGAAACAAGAGCTTCTTGGTGTGGATCTATAGTGCAACTAAATCACTAATGAGCAGGTGGATGGAAATTAAGGGTAGGGTTCTTGAGTTTCTTTAGATGAAGCTAGAGCTTCTTGGTGGCTACTGGCTAAATGGAGTGGTACGTTGTCTGAAGTGAAGTGTATAGACGTTTGAGGACGTGGTTTTGCATCCAAGTGTGGAGAAAAGAATTTTTTTGGTGACAGCTGAACAAAAGCCAAAGATGGAGGTGATAGGAAACAATATCTTTAAGAAAGAGATTGTTGTAATCACTCCACCCCGAAAACTTCAACTCCATTCTTCGTCATTCATTGTCATTCCTCTTTAGGAACAACCAAGAGCTTTCGTACCGGATTAATGCAATAAGTTTTTGTGATTTAAGTCAAATTTATCAGAAGGGGAAACCACTAAACCTCTCTGAAGTTTAAATTCTTTAATGTATAAAAGAATTCCACGATAAAGCAAGTATGGGGATTTAACTTGTATGAAAGATGAGAATAACCTATAAATCTCGGTATACGATTGGACTAATCAATAGAATTAACTAACTGGCATTAACAATTTGACTAATTATCTTAATCAAATTAGCTAATTAGACTAGTCATAGAATTATGTTTCCTGCACTTGCTATCTCCGTTCTTTCTTGTCATGGTAGTTGATTTCCTCTGTAGACATCTAACGAAAGGGCTTACGAATAATATATTTCTCTTATTATGTTTCTGTGATATGTTTTTGAAAGTAATATTGTTTTATCACATCTGTGATCACTATCCACTCAAGAAGTGCAAAGGTACGGTTTGCCAAGTGTTCTAGGTGATCTAGGGGAGACCATTCTATATGCATATATCTTTGGTATACTTTCAATTTTTTTCAGTTTCAGGTTATTAACAATTTCTCTTTTTTCGTGGAATAAAATTGTAGTGTTGTTTAGAGGAGTAATCTTTTTCCGAAGGACCTCTGTGGCATGACTTGGTGGATTTTCTTGATGTTCTTCCTTCAATTGTTTTGGAAGTTTTATTTCACTTTTGTTAGATGTAAAGCCATGAAGTCTTTGGTTGTCTATAGCAAATTTTGTTTGTCCTATTGAGTTTTTTTTATGATGTACATGTCTTGATGATGTTGGTTGGCTCATTTTCACTAGGTTGGGCAAAAAGGTAACGAAGGTTAAAGGAACATTCTTGATAATGGCTTTTGAATCTTCTTGTTTCTGGGTCTTCATATTTGCATGTTACTTCTTTTTCTATTTTTATTCTTGTCCTTGTTGCTTAGTCTGTTGTAGTTTTTTTTGTGGCTGAAAATGTCACTTTATTCTTGAGTACAGGATTACTTCGCATCTGAATCTATGAATCAAACTGTGCATCTCGTCAGGGAAAAGCTTGATAAGGTTATAAAACTTATATTCATATGATTTATTCTCTACATTTGAGCGCATTTGTAATTTAAACATTGCTTCTTACCTTTGTGTTTTAGATTCAATCAAGCAGCGAACATCTGCAAGCTGGACCCGCGAGCAAGAAATCACGTATGGACAATAGGAGGAGAATCTAATGCTTGCCGACCTCTTTATAGAGACGGTTAATAGGTGTCTCAACGTTGTATCAAAGGCTATTTTGACATGTCGCATATACTTAGATTTGCAGTGTAGAAATTAAACTGTTTGACCTTTTATTTCAAAGGTGAAAAAGTAATAGTGCATGCAACAAAGTTCTGTAGAGGAGTGTTTTATTGTCATCACTATAGCACGTATTGCATCAGTTCTCACACGAAGATCGTTATTGTAGATTTATAGTATACATTTGTAATTACTTTTTTTAGTATACGTAACGATTGTGTAAAGAAATATTAGACCAAAATTTCGTACGACTTATTAATTACTCCGGGAAGATGGA

mRNA sequence

ATTGGTTGCAACCCAAGCGTTTGTTTATAATTATGAAATTTTTTGTGTAGGTGCCGCAAATTCCACCTTTATCCATGGATCCCTTGTTCCTTCAATTTGAAACTCATTTTCCTGCTAAATCATGACAAAAATCCCAGGGAACGATCGGGAGAAGCATCTCGAGTTTGGACGCCGTAGCCTCAAGCAAAACATCTGATCTGAATTTGACGACAAATCCGACCCACAGGTCTAAAGGAGTTCCACGATCACAGCAGGATGCTATGTTCTCAATTTGTGAGTGAAACAACTAAAGTGCAACAACGACTGCAACTTAGAAAAAGGACGCTCAATCGGGAAGGCATTCAAGGGCATTCGAATCAGTTGAGGGTTTTGCCGGAACTCTCGTGTGCTTAATTTGTGATTGTGCCAATCGAGAAACAGGGCGGAGTTTGATTCGATAACTTGAAATCGGAAATCGGAAATCGAAATTGGGAGAAGACGGGTTGTTGGGGGATGCCTCGTTTTAGAGACGAGCCCCTTGCGGTTCGCGCCTATACAGTTTGCGATGAGTCAAGGTATTTGATTGTGAGGAACGTTCCGGCATTGGGTTGTGGAGATGGCTTGCACAAACTGTTCTCCTCCTACGGGAACCTTGAAGAGTGTAAACCCATGGATGCAGAAGAATGTGATGAATTCACAGACGTTTATTTTGTCAAATTTCATTTGGTCACCAATGCCAGGTTTGCAAAAAGAAAATTGGACGAGTTTGTTTTCCTTGGTAATCGGCTCCAAGTCTCTTATGCGCCTGAGTTTGAAAGCTTGCTTGATACAAAGGAGAAGCTAGAAGTTAGGAGACGAGAAGTTTTAGCACGATTGGATTCTGGCAGACCAAGAGGATCTGCAGTTAGTTCAACAACCGCAAAGCTTACAAATCCTTCTCGCGCTCATTATACTCTTGAACAGAAGAACTCTATTGAAAAGAGGAATTATGGAGACGCAGCACTCATTTCCAATCCCCATGTTTCTCAAATAACAAGAGTTTCCTCTGACCAGGATTACTTCGCATCTGAATCTATGAATCAAACTGTGCATCTCGTCAGGGAAAAGCTTGATAAGATTCAATCAAGCAGCGAACATCTGCAAGCTGGACCCGCGAGCAAGAAATCACGTATGGACAATAGGAGGAGAATCTAATGCTTGCCGACCTCTTTATAGAGACGGTTAATAGGTGTCTCAACGTTGTATCAAAGGCTATTTTGACATGTCGCATATACTTAGATTTGCAGTGTAGAAATTAAACTGTTTGACCTTTTATTTCAAAGGTGAAAAAGTAATAGTGCATGCAACAAAGTTCTGTAGAGGAGTGTTTTATTGTCATCACTATAGCACGTATTGCATCAGTTCTCACACGAAGATCGTTATTGTAGATTTATAGTATACATTTGTAATTACTTTTTTTAGTATACGTAACGATTGTGTAAAGAAATATTAGACCAAAATTTCGTACGACTTATTAATTACTCCGGGAAGATGGA

Coding sequence (CDS)

ATGCCTCGTTTTAGAGACGAGCCCCTTGCGGTTCGCGCCTATACAGTTTGCGATGAGTCAAGGTATTTGATTGTGAGGAACGTTCCGGCATTGGGTTGTGGAGATGGCTTGCACAAACTGTTCTCCTCCTACGGGAACCTTGAAGAGTGTAAACCCATGGATGCAGAAGAATGTGATGAATTCACAGACGTTTATTTTGTCAAATTTCATTTGGTCACCAATGCCAGGTTTGCAAAAAGAAAATTGGACGAGTTTGTTTTCCTTGGTAATCGGCTCCAAGTCTCTTATGCGCCTGAGTTTGAAAGCTTGCTTGATACAAAGGAGAAGCTAGAAGTTAGGAGACGAGAAGTTTTAGCACGATTGGATTCTGGCAGACCAAGAGGATCTGCAGTTAGTTCAACAACCGCAAAGCTTACAAATCCTTCTCGCGCTCATTATACTCTTGAACAGAAGAACTCTATTGAAAAGAGGAATTATGGAGACGCAGCACTCATTTCCAATCCCCATGTTTCTCAAATAACAAGAGTTTCCTCTGACCAGGATTACTTCGCATCTGAATCTATGAATCAAACTGTGCATCTCGTCAGGGAAAAGCTTGATAAGATTCAATCAAGCAGCGAACATCTGCAAGCTGGACCCGCGAGCAAGAAATCACGTATGGACAATAGGAGGAGAATCTAA

Protein sequence

MPRFRDEPLAVRAYTVCDESRYLIVRNVPALGCGDGLHKLFSSYGNLEECKPMDAEECDEFTDVYFVKFHLVTNARFAKRKLDEFVFLGNRLQVSYAPEFESLLDTKEKLEVRRREVLARLDSGRPRGSAVSSTTAKLTNPSRAHYTLEQKNSIEKRNYGDAALISNPHVSQITRVSSDQDYFASESMNQTVHLVREKLDKIQSSSEHLQAGPASKKSRMDNRRRI

Homology

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BLAST of PI0018875 vs. ExPASy Swiss-Prot
Match: A4FVJ7 (RNA-binding protein 48 OS=Danio rerio OX=7955 GN=rbm48 PE=2 SV=1)

HSP 1 Score: 114.0 bits (284), Expect = 2.2e-24
Identity = 68/180 (37.78%), Postives = 104/180 (57.78%), Query Frame = 0


Query: 2   PRFRD--EPLAVRAYTVCDESRYLIVRNVPALGCGDGLHKLFSSYGNLEECKPMDAEECD 61
           P++R+     AV+ YT+  ESRYL+V+ VPA+G    L +LF+ YG +EE +P+D    +
Sbjct: 30  PKYREGRRLKAVKVYTINLESRYLLVQGVPAIGVMAELVQLFALYGVIEEYRPLDEYPAE 89

Query: 62  EFTDVYFVKFHLVTNARFAKRKLDEFVFLGNRLQVSYAPEFESLLDTKEKLEVRRREVLA 121
           +FT+VY ++F  +T+AR AKR  DE  F G +L V YAPE+E++ +TK+KL+ RRR V  
Sbjct: 90  QFTEVYLIQFQKLTSARAAKRHTDEKSFFGGQLHVCYAPEYETVEETKQKLQDRRRYV-- 149

Query: 122 RLDSGRPRGSAVSSTTAKLTNPSRAHYTLEQKNSIEKRNYGDAALISNPHVSQITRVSSD 180
                    +  S   AKL +  +A    E  +S + R      +  NP  ++   V+SD
Sbjct: 150 ---------NWASQNAAKL-HSQQAEVNTESSSSTDTRTAEAPIMQKNPEEARRENVNSD 197

[Close]

BLAST of PI0018875 vs. ExPASy Swiss-Prot
Match: Q5R4U2 (RNA-binding protein 48 OS=Pongo abelii OX=9601 GN=RBM48 PE=2 SV=1)

HSP 1 Score: 103.6 bits (257), Expect = 3.0e-21
Identity = 49/111 (44.14%), Postives = 76/111 (68.47%), Query Frame = 0


Query: 8   PLAVRAYTVCDESRYLIVRNVPALGCGDGLHKLFSSYGNLEECKPMDAEECDEFTDVYFV 67
           P AV+ YT+  ES+YL+++ VPA+G    L + F+ YG +E+   +D    ++FT+VY +
Sbjct: 33  PRAVKVYTINLESQYLLIQGVPAVGVMKELVERFALYGTIEQYNALDEYPAEDFTEVYLI 92

Query: 68  KFHLVTNARFAKRKLDEFVFLGNRLQVSYAPEFESLLDTKEKLEVRRREVL 119
           KF  + +AR AKRK+DE  F G  L V YAPEFE++ +T++KL+VR+  V+
Sbjct: 93  KFMNLQSARAAKRKMDEQSFFGGLLHVCYAPEFETVEETRKKLQVRKAYVV 143

[Close]

BLAST of PI0018875 vs. ExPASy Swiss-Prot
Match: Q5RL73 (RNA-binding protein 48 OS=Homo sapiens OX=9606 GN=RBM48 PE=1 SV=1)

HSP 1 Score: 101.7 bits (252), Expect = 1.1e-20
Identity = 48/111 (43.24%), Postives = 76/111 (68.47%), Query Frame = 0


Query: 8   PLAVRAYTVCDESRYLIVRNVPALGCGDGLHKLFSSYGNLEECKPMDAEECDEFTDVYFV 67
           P AV+ YT+  ES+YL+++ VPA+G    L + F+ YG +E+   +D    ++FT+VY +
Sbjct: 33  PRAVKVYTINLESQYLLIQGVPAVGVMKELVERFALYGAIEQYNALDEYPAEDFTEVYLI 92

Query: 68  KFHLVTNARFAKRKLDEFVFLGNRLQVSYAPEFESLLDTKEKLEVRRREVL 119
           KF  + +AR AKRK+DE  F G  L V YAPEFE++ +T++KL++R+  V+
Sbjct: 93  KFMNLQSARTAKRKMDEQSFFGGLLHVCYAPEFETVEETRKKLQMRKAYVV 143

[Close]

BLAST of PI0018875 vs. ExPASy Swiss-Prot
Match: Q561R3 (RNA-binding protein 48 OS=Rattus norvegicus OX=10116 GN=Rbm48 PE=2 SV=1)

HSP 1 Score: 100.9 bits (250), Expect = 1.9e-20
Identity = 47/107 (43.93%), Postives = 73/107 (68.22%), Query Frame = 0


Query: 8   PLAVRAYTVCDESRYLIVRNVPALGCGDGLHKLFSSYGNLEECKPMDAEECDEFTDVYFV 67
           P AV+ YT+  ES+YL+++ VPA+G    L + F+ YG +E+   +D    ++FT+VY +
Sbjct: 33  PRAVKVYTINLESQYLLIQGVPAVGAMKELVERFALYGAIEQYNALDEYPAEDFTEVYLI 92

Query: 68  KFHLVTNARFAKRKLDEFVFLGNRLQVSYAPEFESLLDTKEKLEVRR 115
           KF  + +AR AK+K+DE  F G  L V YAPEFE++ +T++KLE R+
Sbjct: 93  KFVKLQSARIAKKKMDEQSFFGGLLHVCYAPEFETVEETRKKLEERK 139

[Close]

BLAST of PI0018875 vs. ExPASy Swiss-Prot
Match: Q8K2X2 (RNA-binding protein 48 OS=Mus musculus OX=10090 GN=Rbm48 PE=2 SV=2)

HSP 1 Score: 99.4 bits (246), Expect = 5.6e-20
Identity = 46/107 (42.99%), Postives = 73/107 (68.22%), Query Frame = 0


Query: 8   PLAVRAYTVCDESRYLIVRNVPALGCGDGLHKLFSSYGNLEECKPMDAEECDEFTDVYFV 67
           P AV+ YT+  ES+YL+++ VPA+G    L + F+ YG +E+   +D    ++FT+VY +
Sbjct: 33  PRAVKVYTINLESQYLLIQGVPAVGAMKELVERFALYGAIEQYNALDEYPAEDFTEVYLI 92

Query: 68  KFHLVTNARFAKRKLDEFVFLGNRLQVSYAPEFESLLDTKEKLEVRR 115
           KF  + +AR AK+K+DE  F G  L V YAPEFE++ +T++KL+ R+
Sbjct: 93  KFVKLQSARVAKKKMDEQSFFGGLLHVCYAPEFETVEETRKKLQERK 139

[Close]

BLAST of PI0018875 vs. ExPASy TrEMBL
Match: A0A5A7V5K4 (RNA-binding protein 48 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold501G002210 PE=3 SV=1)

HSP 1 Score: 434.1 bits (1115), Expect = 3.6e-118
Identity = 217/226 (96.02%), Postives = 224/226 (99.12%), Query Frame = 0


Query: 1   MPRFRDEPLAVRAYTVCDESRYLIVRNVPALGCGDGLHKLFSSYGNLEECKPMDAEECDE 60
           MPRFRDEPLAVRAYTVCDESRYLIVRNVPALGCGDGLHKLFSSYGNLEECKPMDAEECDE
Sbjct: 1   MPRFRDEPLAVRAYTVCDESRYLIVRNVPALGCGDGLHKLFSSYGNLEECKPMDAEECDE 60

Query: 61  FTDVYFVKFHLVTNARFAKRKLDEFVFLGNRLQVSYAPEFESLLDTKEKLEVRRREVLAR 120
           FTDVYFVKFH VTNARFAKRKLDEFVFLGNRLQVSYAPEFESL+DTKEKLEVRRREVLAR
Sbjct: 61  FTDVYFVKFHSVTNARFAKRKLDEFVFLGNRLQVSYAPEFESLVDTKEKLEVRRREVLAR 120

Query: 121 LDSGRPRGSAVSSTTAKLTNPSRAHYTLEQKNSIEKRNYGDAALISNPHVSQITRVSSDQ 180
           LDSGRPRGSAVSSTTAKLTNPSR++YTLEQKNS+E RNYGDAALIS+PHVSQ+TRVSSDQ
Sbjct: 121 LDSGRPRGSAVSSTTAKLTNPSRSNYTLEQKNSLENRNYGDAALISSPHVSQMTRVSSDQ 180

Query: 181 DYFASESMNQTVHLVREKLDKIQSSSEHLQAGPASKKSRMDNRRRI 227
           DYFASESMNQTVHLVREKLDKIQSSSEHLQAGPASKKSR+DNRRRI
Sbjct: 181 DYFASESMNQTVHLVREKLDKIQSSSEHLQAGPASKKSRLDNRRRI 226

[Close]

BLAST of PI0018875 vs. ExPASy TrEMBL
Match: A0A1S3BA34 (RNA-binding protein 48 OS=Cucumis melo OX=3656 GN=LOC103487697 PE=3 SV=1)

HSP 1 Score: 434.1 bits (1115), Expect = 3.6e-118
Identity = 217/226 (96.02%), Postives = 224/226 (99.12%), Query Frame = 0


Query: 1   MPRFRDEPLAVRAYTVCDESRYLIVRNVPALGCGDGLHKLFSSYGNLEECKPMDAEECDE 60
           MPRFRDEPLAVRAYTVCDESRYLIVRNVPALGCGDGLHKLFSSYGNLEECKPMDAEECDE
Sbjct: 1   MPRFRDEPLAVRAYTVCDESRYLIVRNVPALGCGDGLHKLFSSYGNLEECKPMDAEECDE 60

Query: 61  FTDVYFVKFHLVTNARFAKRKLDEFVFLGNRLQVSYAPEFESLLDTKEKLEVRRREVLAR 120
           FTDVYFVKFH VTNARFAKRKLDEFVFLGNRLQVSYAPEFESL+DTKEKLEVRRREVLAR
Sbjct: 61  FTDVYFVKFHSVTNARFAKRKLDEFVFLGNRLQVSYAPEFESLVDTKEKLEVRRREVLAR 120

Query: 121 LDSGRPRGSAVSSTTAKLTNPSRAHYTLEQKNSIEKRNYGDAALISNPHVSQITRVSSDQ 180
           LDSGRPRGSAVSSTTAKLTNPSR++YTLEQKNS+E RNYGDAALIS+PHVSQ+TRVSSDQ
Sbjct: 121 LDSGRPRGSAVSSTTAKLTNPSRSNYTLEQKNSLENRNYGDAALISSPHVSQMTRVSSDQ 180

Query: 181 DYFASESMNQTVHLVREKLDKIQSSSEHLQAGPASKKSRMDNRRRI 227
           DYFASESMNQTVHLVREKLDKIQSSSEHLQAGPASKKSR+DNRRRI
Sbjct: 181 DYFASESMNQTVHLVREKLDKIQSSSEHLQAGPASKKSRLDNRRRI 226

[Close]

BLAST of PI0018875 vs. ExPASy TrEMBL
Match: A0A0A0LQL2 (RNA-binding protein 48 OS=Cucumis sativus OX=3659 GN=Csa_2G348830 PE=3 SV=1)

HSP 1 Score: 431.8 bits (1109), Expect = 1.8e-117
Identity = 218/226 (96.46%), Postives = 222/226 (98.23%), Query Frame = 0


Query: 1   MPRFRDEPLAVRAYTVCDESRYLIVRNVPALGCGDGLHKLFSSYGNLEECKPMDAEECDE 60
           MP FRDE LAVRAYTVCDESRYLIVRNVPALGCGD LHKLFSSYGNLEECKPMDAEECDE
Sbjct: 33  MPCFRDESLAVRAYTVCDESRYLIVRNVPALGCGDDLHKLFSSYGNLEECKPMDAEECDE 92

Query: 61  FTDVYFVKFHLVTNARFAKRKLDEFVFLGNRLQVSYAPEFESLLDTKEKLEVRRREVLAR 120
           FTDVYFVKFHLVTNARFAKRKLDEFVFLGNRLQVSYAPEFESLLDTKEKLEVRRREVLAR
Sbjct: 93  FTDVYFVKFHLVTNARFAKRKLDEFVFLGNRLQVSYAPEFESLLDTKEKLEVRRREVLAR 152

Query: 121 LDSGRPRGSAVSSTTAKLTNPSRAHYTLEQKNSIEKRNYGDAALISNPHVSQITRVSSDQ 180
           LDSGRPRG+AVSSTTAKLTN SR+HYTL+QKNS+EKRNYGDAALISNPHVSQITRVSSDQ
Sbjct: 153 LDSGRPRGTAVSSTTAKLTNQSRSHYTLKQKNSLEKRNYGDAALISNPHVSQITRVSSDQ 212

Query: 181 DYFASESMNQTVHLVREKLDKIQSSSEHLQAGPASKKSRMDNRRRI 227
           DYFASESMNQTVHLVREKLDKIQSSSEHLQAGPASKKSRMDNRRRI
Sbjct: 213 DYFASESMNQTVHLVREKLDKIQSSSEHLQAGPASKKSRMDNRRRI 258

[Close]

BLAST of PI0018875 vs. ExPASy TrEMBL
Match: A0A6J1K7Z4 (RNA-binding protein 48 OS=Cucurbita maxima OX=3661 GN=LOC111492499 PE=3 SV=1)

HSP 1 Score: 408.7 bits (1049), Expect = 1.6e-110
Identity = 203/226 (89.82%), Postives = 214/226 (94.69%), Query Frame = 0


Query: 1   MPRFRDEPLAVRAYTVCDESRYLIVRNVPALGCGDGLHKLFSSYGNLEECKPMDAEECDE 60
           MPR+ +EP AVR YT+CDESRYLIVRNVPALGCGD L KLFSSYGNLEECKPMDAEECDE
Sbjct: 1   MPRYTNEPPAVRVYTICDESRYLIVRNVPALGCGDELLKLFSSYGNLEECKPMDAEECDE 60

Query: 61  FTDVYFVKFHLVTNARFAKRKLDEFVFLGNRLQVSYAPEFESLLDTKEKLEVRRREVLAR 120
           FTDVYFVKFHLV+NARFAKRKLDEFVFLGNRLQVSYAP+FESLLDTKEKLEVRRREVLAR
Sbjct: 61  FTDVYFVKFHLVSNARFAKRKLDEFVFLGNRLQVSYAPDFESLLDTKEKLEVRRREVLAR 120

Query: 121 LDSGRPRGSAVSSTTAKLTNPSRAHYTLEQKNSIEKRNYGDAALISNPHVSQITRVSSDQ 180
           LDSGRPRGSAV+S T K TNPS +HYTLEQKNS+EKRNYGDAAL SNPHVSQITRVSSDQ
Sbjct: 121 LDSGRPRGSAVNSATTKFTNPSHSHYTLEQKNSLEKRNYGDAALSSNPHVSQITRVSSDQ 180

Query: 181 DYFASESMNQTVHLVREKLDKIQSSSEHLQAGPASKKSRMDNRRRI 227
           DYFASESMNQTVHLVREKLDKIQS SEHL+AGP SK+SR+DNRRRI
Sbjct: 181 DYFASESMNQTVHLVREKLDKIQSCSEHLEAGPVSKRSRVDNRRRI 226

[Close]

BLAST of PI0018875 vs. ExPASy TrEMBL
Match: A0A6J1HAQ6 (RNA-binding protein 48 OS=Cucurbita moschata OX=3662 GN=LOC111462353 PE=3 SV=1)

HSP 1 Score: 404.8 bits (1039), Expect = 2.3e-109
Identity = 201/226 (88.94%), Postives = 214/226 (94.69%), Query Frame = 0


Query: 1   MPRFRDEPLAVRAYTVCDESRYLIVRNVPALGCGDGLHKLFSSYGNLEECKPMDAEECDE 60
           MPR+ +EP AVR YT+CDESRYLIVRNVPALGCGD L KLFSSYGNLEECKPMDAEECDE
Sbjct: 1   MPRYTNEPPAVRVYTICDESRYLIVRNVPALGCGDELLKLFSSYGNLEECKPMDAEECDE 60

Query: 61  FTDVYFVKFHLVTNARFAKRKLDEFVFLGNRLQVSYAPEFESLLDTKEKLEVRRREVLAR 120
           FTDVYFVKFHLV+NARFAKRKLDEFVFLGNRLQVSYAP+FESLLDTKEKLEVRRREVLAR
Sbjct: 61  FTDVYFVKFHLVSNARFAKRKLDEFVFLGNRLQVSYAPDFESLLDTKEKLEVRRREVLAR 120

Query: 121 LDSGRPRGSAVSSTTAKLTNPSRAHYTLEQKNSIEKRNYGDAALISNPHVSQITRVSSDQ 180
           L+SGRPRGSAV+S T K TNPS +HYTLEQK+S+EKRNYGDAAL SNPHVSQITRVSSDQ
Sbjct: 121 LNSGRPRGSAVNSATTKFTNPSHSHYTLEQKSSLEKRNYGDAALSSNPHVSQITRVSSDQ 180

Query: 181 DYFASESMNQTVHLVREKLDKIQSSSEHLQAGPASKKSRMDNRRRI 227
           DYFASESMNQTVHLVREKLDKIQS SEHL+AGP SK+SR+DNRRRI
Sbjct: 181 DYFASESMNQTVHLVREKLDKIQSCSEHLEAGPVSKRSRVDNRRRI 226

[Close]

BLAST of PI0018875 vs. NCBI nr
Match: XP_008444339.1 (PREDICTED: RNA-binding protein 48 isoform X1 [Cucumis melo] >KAA0061081.1 RNA-binding protein 48 isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 434.1 bits (1115), Expect = 7.4e-118
Identity = 217/226 (96.02%), Postives = 224/226 (99.12%), Query Frame = 0


Query: 1   MPRFRDEPLAVRAYTVCDESRYLIVRNVPALGCGDGLHKLFSSYGNLEECKPMDAEECDE 60
           MPRFRDEPLAVRAYTVCDESRYLIVRNVPALGCGDGLHKLFSSYGNLEECKPMDAEECDE
Sbjct: 1   MPRFRDEPLAVRAYTVCDESRYLIVRNVPALGCGDGLHKLFSSYGNLEECKPMDAEECDE 60

Query: 61  FTDVYFVKFHLVTNARFAKRKLDEFVFLGNRLQVSYAPEFESLLDTKEKLEVRRREVLAR 120
           FTDVYFVKFH VTNARFAKRKLDEFVFLGNRLQVSYAPEFESL+DTKEKLEVRRREVLAR
Sbjct: 61  FTDVYFVKFHSVTNARFAKRKLDEFVFLGNRLQVSYAPEFESLVDTKEKLEVRRREVLAR 120

Query: 121 LDSGRPRGSAVSSTTAKLTNPSRAHYTLEQKNSIEKRNYGDAALISNPHVSQITRVSSDQ 180
           LDSGRPRGSAVSSTTAKLTNPSR++YTLEQKNS+E RNYGDAALIS+PHVSQ+TRVSSDQ
Sbjct: 121 LDSGRPRGSAVSSTTAKLTNPSRSNYTLEQKNSLENRNYGDAALISSPHVSQMTRVSSDQ 180

Query: 181 DYFASESMNQTVHLVREKLDKIQSSSEHLQAGPASKKSRMDNRRRI 227
           DYFASESMNQTVHLVREKLDKIQSSSEHLQAGPASKKSR+DNRRRI
Sbjct: 181 DYFASESMNQTVHLVREKLDKIQSSSEHLQAGPASKKSRLDNRRRI 226

[Close]

BLAST of PI0018875 vs. NCBI nr
Match: XP_004142975.1 (RNA-binding protein 48 isoform X2 [Cucumis sativus] >KGN62296.1 hypothetical protein Csa_018618 [Cucumis sativus])

HSP 1 Score: 431.8 bits (1109), Expect = 3.7e-117
Identity = 218/226 (96.46%), Postives = 222/226 (98.23%), Query Frame = 0


Query: 1   MPRFRDEPLAVRAYTVCDESRYLIVRNVPALGCGDGLHKLFSSYGNLEECKPMDAEECDE 60
           MP FRDE LAVRAYTVCDESRYLIVRNVPALGCGD LHKLFSSYGNLEECKPMDAEECDE
Sbjct: 33  MPCFRDESLAVRAYTVCDESRYLIVRNVPALGCGDDLHKLFSSYGNLEECKPMDAEECDE 92

Query: 61  FTDVYFVKFHLVTNARFAKRKLDEFVFLGNRLQVSYAPEFESLLDTKEKLEVRRREVLAR 120
           FTDVYFVKFHLVTNARFAKRKLDEFVFLGNRLQVSYAPEFESLLDTKEKLEVRRREVLAR
Sbjct: 93  FTDVYFVKFHLVTNARFAKRKLDEFVFLGNRLQVSYAPEFESLLDTKEKLEVRRREVLAR 152

Query: 121 LDSGRPRGSAVSSTTAKLTNPSRAHYTLEQKNSIEKRNYGDAALISNPHVSQITRVSSDQ 180
           LDSGRPRG+AVSSTTAKLTN SR+HYTL+QKNS+EKRNYGDAALISNPHVSQITRVSSDQ
Sbjct: 153 LDSGRPRGTAVSSTTAKLTNQSRSHYTLKQKNSLEKRNYGDAALISNPHVSQITRVSSDQ 212

Query: 181 DYFASESMNQTVHLVREKLDKIQSSSEHLQAGPASKKSRMDNRRRI 227
           DYFASESMNQTVHLVREKLDKIQSSSEHLQAGPASKKSRMDNRRRI
Sbjct: 213 DYFASESMNQTVHLVREKLDKIQSSSEHLQAGPASKKSRMDNRRRI 258

[Close]

BLAST of PI0018875 vs. NCBI nr
Match: XP_011649485.1 (RNA-binding protein 48 isoform X1 [Cucumis sativus])

HSP 1 Score: 427.2 bits (1097), Expect = 9.0e-116
Identity = 218/227 (96.04%), Postives = 222/227 (97.80%), Query Frame = 0


Query: 1   MPRFRDEPLAVRAYTVCDESRYLIVRNVPALGCGDGLHKLFSSYGNLEECKPMDAEECDE 60
           MP FRDE LAVRAYTVCDESRYLIVRNVPALGCGD LHKLFSSYGNLEECKPMDAEECDE
Sbjct: 33  MPCFRDESLAVRAYTVCDESRYLIVRNVPALGCGDDLHKLFSSYGNLEECKPMDAEECDE 92

Query: 61  FTDVYFVKFHLVTNARFAKRKLDEFVFLGNRLQVSYAPEFESLLDTKEKLEVRRREVLAR 120
           FTDVYFVKFHLVTNARFAKRKLDEFVFLGNRLQVSYAPEFESLLDTKEKLEVRRREVLAR
Sbjct: 93  FTDVYFVKFHLVTNARFAKRKLDEFVFLGNRLQVSYAPEFESLLDTKEKLEVRRREVLAR 152

Query: 121 LDSGRPRGSAVSSTTAKLTNPSRAHYTLEQKNSIEK-RNYGDAALISNPHVSQITRVSSD 180
           LDSGRPRG+AVSSTTAKLTN SR+HYTL+QKNS+EK RNYGDAALISNPHVSQITRVSSD
Sbjct: 153 LDSGRPRGTAVSSTTAKLTNQSRSHYTLKQKNSLEKSRNYGDAALISNPHVSQITRVSSD 212

Query: 181 QDYFASESMNQTVHLVREKLDKIQSSSEHLQAGPASKKSRMDNRRRI 227
           QDYFASESMNQTVHLVREKLDKIQSSSEHLQAGPASKKSRMDNRRRI
Sbjct: 213 QDYFASESMNQTVHLVREKLDKIQSSSEHLQAGPASKKSRMDNRRRI 259

[Close]

BLAST of PI0018875 vs. NCBI nr
Match: XP_038884635.1 (RNA-binding protein 48 isoform X1 [Benincasa hispida])

HSP 1 Score: 421.4 bits (1082), Expect = 4.9e-114
Identity = 212/226 (93.81%), Postives = 217/226 (96.02%), Query Frame = 0


Query: 1   MPRFRDEPLAVRAYTVCDESRYLIVRNVPALGCGDGLHKLFSSYGNLEECKPMDAEECDE 60
           MPRF DEP AVR YTVCDESRYL+VRNVPALGCGD L KLFSSYGNLEECKPMDAEECDE
Sbjct: 1   MPRFTDEPPAVRVYTVCDESRYLVVRNVPALGCGDDLLKLFSSYGNLEECKPMDAEECDE 60

Query: 61  FTDVYFVKFHLVTNARFAKRKLDEFVFLGNRLQVSYAPEFESLLDTKEKLEVRRREVLAR 120
           FTDVYFVKFHLVT+ARFAKRKLDEFVFLGNRLQVSYAPEFESLLDT+EKLEVRRREVLAR
Sbjct: 61  FTDVYFVKFHLVTSARFAKRKLDEFVFLGNRLQVSYAPEFESLLDTEEKLEVRRREVLAR 120

Query: 121 LDSGRPRGSAVSSTTAKLTNPSRAHYTLEQKNSIEKRNYGDAALISNPHVSQITRVSSDQ 180
           LDSGRPRGSAVSSTTAK TNPSR+HYTLEQKNS+E RNYGD  LISNPHVSQITRVSSDQ
Sbjct: 121 LDSGRPRGSAVSSTTAKRTNPSRSHYTLEQKNSLETRNYGDTTLISNPHVSQITRVSSDQ 180

Query: 181 DYFASESMNQTVHLVREKLDKIQSSSEHLQAGPASKKSRMDNRRRI 227
           DYFASESMNQTVHLVREKLDKIQSSSEHLQAGPASKKSRMDNRRRI
Sbjct: 181 DYFASESMNQTVHLVREKLDKIQSSSEHLQAGPASKKSRMDNRRRI 226

[Close]

BLAST of PI0018875 vs. NCBI nr
Match: XP_022997621.1 (RNA-binding protein 48 isoform X1 [Cucurbita maxima])

HSP 1 Score: 408.7 bits (1049), Expect = 3.3e-110
Identity = 203/226 (89.82%), Postives = 214/226 (94.69%), Query Frame = 0


Query: 1   MPRFRDEPLAVRAYTVCDESRYLIVRNVPALGCGDGLHKLFSSYGNLEECKPMDAEECDE 60
           MPR+ +EP AVR YT+CDESRYLIVRNVPALGCGD L KLFSSYGNLEECKPMDAEECDE
Sbjct: 1   MPRYTNEPPAVRVYTICDESRYLIVRNVPALGCGDELLKLFSSYGNLEECKPMDAEECDE 60

Query: 61  FTDVYFVKFHLVTNARFAKRKLDEFVFLGNRLQVSYAPEFESLLDTKEKLEVRRREVLAR 120
           FTDVYFVKFHLV+NARFAKRKLDEFVFLGNRLQVSYAP+FESLLDTKEKLEVRRREVLAR
Sbjct: 61  FTDVYFVKFHLVSNARFAKRKLDEFVFLGNRLQVSYAPDFESLLDTKEKLEVRRREVLAR 120

Query: 121 LDSGRPRGSAVSSTTAKLTNPSRAHYTLEQKNSIEKRNYGDAALISNPHVSQITRVSSDQ 180
           LDSGRPRGSAV+S T K TNPS +HYTLEQKNS+EKRNYGDAAL SNPHVSQITRVSSDQ
Sbjct: 121 LDSGRPRGSAVNSATTKFTNPSHSHYTLEQKNSLEKRNYGDAALSSNPHVSQITRVSSDQ 180

Query: 181 DYFASESMNQTVHLVREKLDKIQSSSEHLQAGPASKKSRMDNRRRI 227
           DYFASESMNQTVHLVREKLDKIQS SEHL+AGP SK+SR+DNRRRI
Sbjct: 181 DYFASESMNQTVHLVREKLDKIQSCSEHLEAGPVSKRSRVDNRRRI 226

[Close]

BLAST of PI0018875 vs. TAIR 10
Match: AT2G27790.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 240.4 bits (612), Expect = 1.5e-63
Identity = 134/251 (53.39%), Postives = 168/251 (66.93%), Query Frame = 0


Query: 1   MPRFRDEPLAVRAYTVCDESRYLIVRNVPALGCGDGLHKLFSSYGNLEECKPMDAEECDE 60
           M R++DE  AVR YTVCDESRY+IVRNVPALGCGD L +LF +YG +EECKPMDAE+C E
Sbjct: 1   MGRYKDETPAVRVYTVCDESRYMIVRNVPALGCGDDLMRLFMTYGEVEECKPMDAEDCAE 60

Query: 61  FTDVYFVKFHLVTNARFAKRKLDEFVFLGNRLQVSYAPEFESLLDTKEKLEVRRREVLAR 120
           FTDVY++KF L+TNARFAKRKLDE  FLGNRLQ+SYAPE+E++ DTK+KLE RR+EVLAR
Sbjct: 61  FTDVYWIKFRLITNARFAKRKLDESSFLGNRLQISYAPEYENVNDTKDKLESRRKEVLAR 120

Query: 121 LDSGRPRGSAVSSTTAKLTNP--SRAHYTLEQKNSIEKRNYGDAALISNPHVSQITRVSS 180
           L+   P+    +S   KL  P  ++      Q+  +E + +   A         +TRVSS
Sbjct: 121 LN---PQKEKSTSQVTKLAGPALTQTDNVSSQRREMEYQFHRGNA--------PVTRVSS 180

Query: 181 DQDYFASESMNQTVHLVREKLDKIQSSSEHLQAGPAS----------------------- 227
           DQ+YFAS SMNQTV  VREKL+KI+ S    +  P+S                       
Sbjct: 181 DQEYFASSSMNQTVKTVREKLNKIEESGNQKRLQPSSQTQPEESGNQKRLQPSSQIQPDL 240

[Close]

BLAST of PI0018875 vs. TAIR 10
Match: AT2G27790.2 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 240.4 bits (612), Expect = 1.5e-63
Identity = 134/251 (53.39%), Postives = 168/251 (66.93%), Query Frame = 0


Query: 1   MPRFRDEPLAVRAYTVCDESRYLIVRNVPALGCGDGLHKLFSSYGNLEECKPMDAEECDE 60
           M R++DE  AVR YTVCDESRY+IVRNVPALGCGD L +LF +YG +EECKPMDAE+C E
Sbjct: 1   MGRYKDETPAVRVYTVCDESRYMIVRNVPALGCGDDLMRLFMTYGEVEECKPMDAEDCAE 60

Query: 61  FTDVYFVKFHLVTNARFAKRKLDEFVFLGNRLQVSYAPEFESLLDTKEKLEVRRREVLAR 120
           FTDVY++KF L+TNARFAKRKLDE  FLGNRLQ+SYAPE+E++ DTK+KLE RR+EVLAR
Sbjct: 61  FTDVYWIKFRLITNARFAKRKLDESSFLGNRLQISYAPEYENVNDTKDKLESRRKEVLAR 120

Query: 121 LDSGRPRGSAVSSTTAKLTNP--SRAHYTLEQKNSIEKRNYGDAALISNPHVSQITRVSS 180
           L+   P+    +S   KL  P  ++      Q+  +E + +   A         +TRVSS
Sbjct: 121 LN---PQKEKSTSQVTKLAGPALTQTDNVSSQRREMEYQFHRGNA--------PVTRVSS 180

Query: 181 DQDYFASESMNQTVHLVREKLDKIQSSSEHLQAGPAS----------------------- 227
           DQ+YFAS SMNQTV  VREKL+KI+ S    +  P+S                       
Sbjct: 181 DQEYFASSSMNQTVKTVREKLNKIEESGNQKRLQPSSQTQPEESGNQKRLQPSSQIQPDL 240

[Close]

BLAST of PI0018875 vs. TAIR 10
Match: AT5G27300.1 (pentatricopeptide (PPR) repeat-containing protein )

HSP 1 Score: 212.6 bits (540), Expect = 3.2e-55
Identity = 121/218 (55.50%), Postives = 152/218 (69.72%), Query Frame = 0


Query: 15  TVCDESRYLIVRNVPALGCGDGLHKLFSSYGNLEECKPMDAEECDEFTDVYFVKFHLVTN 74
           +VCDESRY+IVRNVPALGCGD L +LF +YG +EECKPMDAE+C EFTDVY++KF L+TN
Sbjct: 371 SVCDESRYMIVRNVPALGCGDDLMRLFMTYGEVEECKPMDAEDCAEFTDVYWIKFRLITN 430

Query: 75  ARFAKRKLDEFVFLGNRLQVSYAPEFESLLDTKEKLEVRRREVLARLDSGRPRGSAVSST 134
           A    RKLDE  FLGNRLQ+SYAPE+ES+ DTKEKLE RR+EVLARL+   P  +  +S 
Sbjct: 431 A----RKLDESSFLGNRLQISYAPEYESVSDTKEKLETRRKEVLARLN---PHKAKSTSQ 490

Query: 135 TAKLTNPSRAHYTLEQKNSIEKRNYGDAALISNPHVSQITRVSSDQDYFASESMNQTVHL 194
             KL  P+     L Q ++   R   +     +   + +TRVSS Q+YFAS SMNQ V  
Sbjct: 491 VTKLAGPA-----LTQTDNFSPRR-REMDYQFHRGNAPVTRVSSYQEYFASSSMNQMVKT 550

Query: 195 VREKLDKIQSSSEHLQAGPAS------KKSRMDNRRRI 227
           VREKL+KI+ S    +  P+S      K++R+DNRRRI
Sbjct: 551 VREKLNKIEESGNQKRLQPSSQTQPDFKRTRVDNRRRI 575

[Close]

BLAST of PI0018875 vs. TAIR 10
Match: AT5G27300.2 (pentatricopeptide (PPR) repeat-containing protein )

HSP 1 Score: 212.6 bits (540), Expect = 3.2e-55
Identity = 121/218 (55.50%), Postives = 152/218 (69.72%), Query Frame = 0


Query: 15  TVCDESRYLIVRNVPALGCGDGLHKLFSSYGNLEECKPMDAEECDEFTDVYFVKFHLVTN 74
           +VCDESRY+IVRNVPALGCGD L +LF +YG +EECKPMDAE+C EFTDVY++KF L+TN
Sbjct: 346 SVCDESRYMIVRNVPALGCGDDLMRLFMTYGEVEECKPMDAEDCAEFTDVYWIKFRLITN 405

Query: 75  ARFAKRKLDEFVFLGNRLQVSYAPEFESLLDTKEKLEVRRREVLARLDSGRPRGSAVSST 134
           A    RKLDE  FLGNRLQ+SYAPE+ES+ DTKEKLE RR+EVLARL+   P  +  +S 
Sbjct: 406 A----RKLDESSFLGNRLQISYAPEYESVSDTKEKLETRRKEVLARLN---PHKAKSTSQ 465

Query: 135 TAKLTNPSRAHYTLEQKNSIEKRNYGDAALISNPHVSQITRVSSDQDYFASESMNQTVHL 194
             KL  P+     L Q ++   R   +     +   + +TRVSS Q+YFAS SMNQ V  
Sbjct: 466 VTKLAGPA-----LTQTDNFSPRR-REMDYQFHRGNAPVTRVSSYQEYFASSSMNQMVKT 525

Query: 195 VREKLDKIQSSSEHLQAGPAS------KKSRMDNRRRI 227
           VREKL+KI+ S    +  P+S      K++R+DNRRRI
Sbjct: 526 VREKLNKIEESGNQKRLQPSSQTQPDFKRTRVDNRRRI 550

The following BLAST results are available for this feature:

BLAST of PI0018875 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
A4FVJ7	2.2e-24	37.78	RNA-binding protein 48 OS=Danio rerio OX=7955 GN=rbm48 PE=2 SV=1	[more]
Q5R4U2	3.0e-21	44.14	RNA-binding protein 48 OS=Pongo abelii OX=9601 GN=RBM48 PE=2 SV=1	[more]
Q5RL73	1.1e-20	43.24	RNA-binding protein 48 OS=Homo sapiens OX=9606 GN=RBM48 PE=1 SV=1	[more]
Q561R3	1.9e-20	43.93	RNA-binding protein 48 OS=Rattus norvegicus OX=10116 GN=Rbm48 PE=2 SV=1	[more]
Q8K2X2	5.6e-20	42.99	RNA-binding protein 48 OS=Mus musculus OX=10090 GN=Rbm48 PE=2 SV=2	[more]

BLAST of PI0018875 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7V5K4	3.6e-118	96.02	RNA-binding protein 48 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold5...	[more]
A0A1S3BA34	3.6e-118	96.02	RNA-binding protein 48 OS=Cucumis melo OX=3656 GN=LOC103487697 PE=3 SV=1	[more]
A0A0A0LQL2	1.8e-117	96.46	RNA-binding protein 48 OS=Cucumis sativus OX=3659 GN=Csa_2G348830 PE=3 SV=1	[more]
A0A6J1K7Z4	1.6e-110	89.82	RNA-binding protein 48 OS=Cucurbita maxima OX=3661 GN=LOC111492499 PE=3 SV=1	[more]
A0A6J1HAQ6	2.3e-109	88.94	RNA-binding protein 48 OS=Cucurbita moschata OX=3662 GN=LOC111462353 PE=3 SV=1	[more]

BLAST of PI0018875 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008444339.1	7.4e-118	96.02	PREDICTED: RNA-binding protein 48 isoform X1 [Cucumis melo] >KAA0061081.1 RNA-bi...	[more]
XP_004142975.1	3.7e-117	96.46	RNA-binding protein 48 isoform X2 [Cucumis sativus] >KGN62296.1 hypothetical pro...	[more]
XP_011649485.1	9.0e-116	96.04	RNA-binding protein 48 isoform X1 [Cucumis sativus]	[more]
XP_038884635.1	4.9e-114	93.81	RNA-binding protein 48 isoform X1 [Benincasa hispida]	[more]
XP_022997621.1	3.3e-110	89.82	RNA-binding protein 48 isoform X1 [Cucurbita maxima]	[more]

BLAST of PI0018875 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G27790.1	1.5e-63	53.39	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT2G27790.2	1.5e-63	53.39	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT5G27300.1	3.2e-55	55.50	pentatricopeptide (PPR) repeat-containing protein	[more]
AT5G27300.2	3.2e-55	55.50	pentatricopeptide (PPR) repeat-containing protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 16..114 e-value: 1.2E-8 score: 37.0
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 23..92 e-value: 4.4E-5 score: 23.2
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 21..99 score: 9.370975
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 127..145
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 203..226
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 123..145
IPR039599	RNA-binding protein 48	PANTHER	PTHR20957	UNCHARACTERIZED	coord: 3..226
IPR034264	RBM48, RNA recognition motif	CDD	cd12442	RRM_RBM48	coord: 11..110 e-value: 1.95097E-53 score: 165.159
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 10..99

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0018875.1	PI0018875.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005654	nucleoplasm
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003676	nucleic acid binding