PI0018871 (gene) Melon (PI 482460) v1

Overview


Name	PI0018871
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	THUMP domain-containing protein
Location	chr10: 11781335 .. 11791731 (+)
RNA-Seq Expression	PI0018871
Synteny	PI0018871

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AGATCATCGGCCAAAGCAATTTAGAAGTACAAACACCTAAATGACAGAGACAGAAGAACAGAACAATGGCTGCCACCTCAAACCTGAAGCAGAAGCTTCCAAACCTGCAGAAAATGTCGCTGAAACCGAAAGGAAAACGATGACGCCATGGGAGCAGCACTCTGCTGTCATAAGCATCCCTCGTTTCGACTACAATGCACCGTCTGCGCTTCTTCACCGTTGCCAGTCTGGATTCCTCATCACTTGCACTATCAGTGAGAATCTCTTCTACAATTGCTTGCAGTACCACATGTTCTTATTGGGTTCTTTAACTGTGTTTTGCTATCGATTGGTCGCTATTTTATTGCCGTCAAATAAAAGGATGCTCGTAAATTGGTGTTTTTGGTTAACGAAGTGCCAATTAACTTCAAATTTCAGGTTTTATTTACATGCCCTGTTTCCTGGGGAAAATTTTAAGGCCCTAAACACTTGCTCTTCCATTAGCCTTCTTTCATTTGCGCTGGGACTTTACACTTCATCGGAATGTTTGCCTGGCTAGTTTTGGAATCTCTTGAATCAGCCTTTTGTGATAATTATGTGTGGTTTCTGATTGGAGAGGAATAATAGAGATTTTAAGGATCATGATAGTTCTTCGGACGAATATGGTTATCTTCTAGGTGTACTATTATCGATTGGAACCCTTTTTTGCGTTGTTAGCTCTGTGGCTCCTTTTGCTCAGCTGTCGTTGTGTATGCCCTTTCATTTTTTACTGTGTTTTTTGGTGTTTTTTACTTCATTTCCCCCCATCTTTTAGATGCTCATATCTGAATGATGCCTTTCAAGTTAACTGAGTTAGGATGGAATTCCTTACTTTAAAATAATAAATAAAGAGTAAGAGAAAATGTACTGTAATTCCTTCCTTTTTTTTTTCAGAGAGGGAGAAGAGTGCCACCAAAGAAGCTATCTCCATCCTTGAAAAGGTTATGTTTTATTACTTTGTCGAATTTTCTCCACGTCATGCATTCTAACCTTCATGACTTTGTGTTTCTATCTAACGAGAGTTTCTGAAGTTTAAATGGTAAACTATTGAGTTGTATCTAGGGTGTTTGAAGATACTAATTCTGTTCTGGCGATTTTTATTTGATCTGCTATAATTGCCTTGGAAATGACCTAGGGACTTCATACTTGAATTTAGAGGCCTTAGCACGAAAAACAATTGCTGAAAAGTTGATTAGAATTGGGTTGGGCTTAAATACTTTTCTATTGGGAGAGCAGATACAATAGTTATATTAAATCATAAGAGATCTAACACAACCATGTAACAGGGACTTGGAAATCTAATTAATTTTTAGTAATCTAGTCGCTCTAATATATTGGAATAGTGATATTACAAAACATTTTATGAATGAATTGCTTTTGACATCTCCACACACCTAATTGAAGAAATTTCAGCATCCCCATTCTCAAAAAGAGGAGAATTCCTCAACCACCTCTTATGTAAAGCCCATCCCACTTTATTCATCAAGTGATATTAGAGCCATGCTCCTACGTTAGCAATGTCGGTAGAGTCCTTGTGTGTTGAATTAAAAATTAGTGAGCCTCGTGTAATGAAAACCTAGATTGGACAAATAGGTGCTTGATATGTGGCAAACAAGTAAAGCTCTATCATATCAGGTAGATTTGGATGGAGAGTAGTCATATCAGATTGGGTAAACTAATAGGAGGAGTATATCTTTGTTTGAGGGAGAATATTAAGGACGTGATAGTGGTGGATACCAAGTATATACCACCACAATGTGATTTGTGGTGTGCTCCATTTGACTTAGCTCTTGACCTTAATTAGAGTAAGAACCTTCTATAAGTGAGTGAGGGACTATATCTCAATTGGAATGGGACCTTTTGGTTGTATCATTTGTCTTTCATTAAAAATCACTTCATCATCGACTTCTTAGTGCGGTCAGGGAATTCCTATTCTTTTTACTTAGGGAAATGACGGAAGTGGTTGCCCTTCTTTCCTTATTGGAGGGTCACCACTTTTGTCAAGGTAGAAGGGATGTTAGAATATGGAGTACCAATCCCATGAATGGCTATTCTTGCAAATCTTTCTTTCAAACCTCGGTGTATCCTTTCCATTCTAGTGAGTTTGTCTTTTCAATTATCTTGAGGATTAAGATTCCTAGAAAAGTGAGATTTTTTTTTCTTGGCAGGTGCTTCACGGTCGCGCCAATACGTATGACAGACTCGCCAGGATTATACCCTCGTTAGTTGGCTCTTTTTGCAGTATTCTCTGCTATAAGGTAGCAGAAGATTTGGACCATATTTTGTGGAGCTGTGACTGTGTGAGTACTATATGGGATTACTTTGCTCAAACATTTGGTAGGGAAAATGCTCGCCCCAGAGCAGTAGGTAATTTGATTAAGGAATACCTTCTTAATTCTCTCTCATTGGGGAGAAAGGCGAATTTCTTTGGAGTGCTACCGTTTATGTGATATTGTGGTTTTATTGAAAGGGAAGAAGACAAAACACAAGGTATACGTGGAAAACCCTAGTACAGGGAGAAAAAACCACGATAGAAGCCTTTCTTATTATTTTCTAATAATCCAAAAATTACAAGGGGGAAAAATATATATGGGCTACAATAAGCCCTAACAAACAAGGAAATATAACTAGGGTACGATAAATTACATAATGCCCTTGAGGCTATAAACAACTAGTCCCTTATTTCCAACACTCCCTCTCAAGTTGGAGCGTAGATTTTAATTAGACCCAACTTGCTAACACAAGAGTCAAAGCTCTACCTGAGTAATCCTTTGGTGAGAACATCAACAATTTGTTGATTGGACGGAATCTATGGAATATAGATACTACCATTGTCAAGTTTCTCCTTTATAAAATGTCTGTCAATCTCCACATGTTTCGTTCTATCATGTTGCAACTGGGTAATTGGCTATACTTATAGCTCTTTTATTATCATAGAAGAGCTTTATAGGTAACTCACAGTCCTGGTGAAGATTAGACAAAACTTTTTGCAGCCAGATCTCTTCATGGATTCCCAAACTCATAGCTTTGTATTCAGCTTCAGTACTACTCCTAGCGACAACACCCTGCTTCTTACTCCTCCGAGTAACAAGATTACCCCACACAAAGGTACAATATCTCGAAGTGGACTTTCTGTCAGTAACTAATCCTTCCCAATCAAAGTCGTTATAAGCCTTAATACATTTTCTATCAGTTTTCCTGAACATCAGACCTTTACTTGGAGTAGTTTTCAAATACCTCAGAGTACGATTCATAGCTTCCATGTGTTCTTCGTAGGGTGCCTGCATAAATTGAGTCACAGTACTAACTGCATTGGAGATAGTTGGTCTAGTATGGGATAGATAAATCAACTTTCCCACTAATTGCTGATACTTCTCTTTATCAATAGGAACTTTGTCAATAAGATTTCCCAGTTTTGAATTGAATTCCATAAGGGTATCAGCAGGTCTGCATCCAGACATATTTGTTTCTTTTAACATGTCGAGTATATTTTCTTTTAACATATCGAGTATATTTTCTTTGTGAAACAGAGATTCCTTCCCTTGATCTTGTCACCTCGATCCCAAGGAAGTATGATGTAAACCAAATAATAAAATTTTATTAATGTTTGAAAAGTTGTGAATACAAGAAGACAAATATTCTATTTATAGCAAAAACAAACTAATCCTAATCCTAATCCGAATTAATAAAAGAAACTTAATCCTAATTCTAAATAATAAAAGAAACTTAATCCTAATTCTAAATGATAAAAGAAACTAATTCTAATCCTAATAAACCAAAGAAACTAATCCTAATTCTAATTCTAATCCTAATCTAATAAATTAAGGATTTGACCACAATATCCTATTCCTACTACATCATTCTATCCCTAAAAAGAAAACTCATCCTCGAGTTTTAAAAAAAGAACTTATTAAAATTCTTGACGCTGAAGTGAAAATCATCAGTGAAGACAAGCAGATTGAGATTCAAGTTGAACAATACGATAAATCGGTTAAAGAAGAAATAACATGTGGAAATGAAATTAACAAAAATACTCTCACAATGGAGATTGTGAGACTCAAATCGGAAAGGAAATCAATGTTGAAAATGGAGGAAAGTGACCTGACCCACAAATCTCTCCACAACATAAGAGATGTAGAAATAGAAGTTGAAGAGGAAGAAGAAGAGAATACTCGTGGGCAAATTTATTTGAATAAACTTGAAAACCTAATTCCAGTTGATTGCGAAGCAACATGGGAGATGCCATGTTTGGAATTGAAAAAATGCAGGCATTCTAGCAAAATCATCAACAAGGCTGAGATGGTTGAAGTGACAAACTTGACAAAGAAAGAAGAAGAAGATGATGAAGCAATGGGTGACTTGGCTATGATGGCAATGGATTTCTTGAACAACATAACTCTTGGACTAAATCATGATGATTTTGCTGAAAAATGTATTCCATTTCAAAAGACAAATCTTGGCTTGACTTGTGCAATTCAGATGTTGTTGCTATTAGTTTTTCAGAGTTGTTTTCGTTCAAGTGGTTTACCTTTTTATTTTTACCTTCATTTTCATTTAAAACTTGAGGACGAGTTTTTTTTTTTTTTTTGGAGGGATAGAATGATGTAGTAGGAATAGGATATTATGGTCAAATCCTTAATTTATTAGATTAGGATTAGGATTAGGATTAGGATTAGAATTAGAATTAGTTTCTTTGGTTTATTAGGATTAGAATTAGTTTCTTTTATTATTTAGAATTAGGATTAAGTTTCTTTTATTAATTAGGATTGGGATTAGGATTAGTTTGCTTTTGGTTTACATCTAAGTACTTCAGATTCCTTATGTCTTTGATTTCAAACGCGTCACCCATCTTCTTTTTCAGCCTGGTAATCTCAGTAGTATCATCTCCTGATAGGACAACGTCATCGACATACACAATCAACATAGCAATTATCCCAAATTCAGACCTTTTTGTAAACAGTGCGTGATCAAAATGTCCCTGAGTGAAGCCTTGAGATTTATCAAAGGTGGTAAATCTGTCGAACCATGCCCTAGGAGATTGTTTCAGACCATAAAAATATTTTCGAATCTTACAAACTTGGTGGTCAACCTGAACTTCAAAACCTGGAGGAGGACTCATGTACACTTCTTCCAAATCACCATTTAGGAAAGTATTCTTTACATCAGGTTGATGGAGAGACCACTTTCTGTTGACTGCAATACAGAAGGACCTTGACTGTGTTTAACTTTGCCACAGGAGAAAAAGTCTTTGAATAATCTACCCCATAAGTCTGAGCGAACCTTTTTGCAACAATCCTGCCCTTGTACTTGTCTAAGGTCCCATTTGATTTGTACTTCAGAGTGAACACCCATTTGCATCCCACTGTCTTGTACCCTTTAGGAAGAGTGCAAAGATCCCATGTCTTATTCTTCTCAAACGCTCCCATTTCTTTATGACAGCAGTCTTCTACTCAGAACTCTCCATAACTTTATGTATGTTCTTTGGTACTATTGCAATATCGGGACTTGTAGTGAACGACCTATAGATTATTGTAAGACATGTAATTACACATAGAGTGCTTCGTACAAGACCTAATACCCTTTCTCAAGGCAATATGCATGTCAAGAGAGGGATCATAACTCCTTGGTTTGTCTAAGTCATCCGGGCTAGTCTCTTCCGGAGCTATCATATTAGTCTTGTCCTCATCAACCACATCAACAATATCATCCTCAAAACACAATTTATTATTATTAAGTTCGTTGGGTTTGTGTTGGTTCAGATTCATGGACCAAAGTTGATGGAGCAGTAGGGTGCACCATCTCGTTTCTAAGATTCTTCCTGTAGTAAGTTATCCAGGGACTTGGTTGGTGGGTAGAACGGTGTCATGGAGGATGAGTTCAGAAGGCTCAGTAGGAGCTAAAAGAATGAAGGTAATGGGTTAGTCAGCCTCTTCACTCACACTTTCCCCCTAAAAAGGGCTTACAAGAAAGAATGGTTTGTCCTCAAAGAAGATGACATCCATGGACACGAAATACTTTCGAGGAGGATGGTAACACTTGATAACCTCTATGTTGTAGAGGATATCCCACGAAAACACATGACTGAGCACGAGGAGCAAACTTAGTATGGTTAGGGCCATGACTATGAACAAAGGCAGTGCACTCGAACACACGGAGAGGAACATTAGGAATAAGTCATATGGTAGGGTAGGACTTCTTGAGACATTCAAGAGGTGTTTGGAGGTGGAGGACGCGAGATGACATTCTATTGATAAGATGAGCTGTAGTGAGGACTGCATCCCTTCATTAGTAGGAGGGAAGAGAAGTAGTGAACATGAGAGAGTGAGCAACCTCGAGGAGGTGGCGGTTTTTTCGTTCAGTCAAACTGTTCTGTTGAGGAGTATTGGCACAAGAACTTTGGTGGACAATCCCTTTAGAGGACAGAAGTTCATGAAGGGTATTATTCAGGAACTCACGACCGTTATTGCTATGCAGAATAGCAATTTTGACGTTGAATTGTGTCTCAGTGGTTGTGTAAAATTGTTGAAATATTGATGAGACCTCAGATTTATTAGTGAGGAGAAAGACTCATGTGAGATCCTTTTTTGTAATGTGACTTGCTCCGGGCTTCGGTTTTGCTGTCCTTATAATTTTATCATTATCTCTCAATGAAATTCTCTTTATTCATTAAAAAAAAAAAAAATTGTAAAGGGACCTTTTGAGTGTTTCAAAAAATAAAACCACGAGAGTTTATACCTTAAGAACTTTTGAGCGAGACGGGTAATAAAGAAACTCACCTAAAACGGTGACTACCCATTGCTAAAGACTCTTCTCTGACACCATTTTGATCAATTGAGAATGGGGTTTTCTTGTTATTGCCAAGAACCTTCTATTCTTTTCTTTACTAAAATCAGTTTTGAACACTTTCTTCCTCATGATACACTTTAAGATTATCTTCGTTATCATGTTTAACATGACTGAGCCATACTTTCATTATGAAATAGATGAGAGGGGTTATCATGTTTAACATGACTGAGCCATACTTTTATTATGAAATAGAAGAGTGGGGTTGATTTCGAGAGAAGTGTGGCAGGGGGAGAGCGAGAAGAGAAGGAGGCTTGAGAGGAGAGGGAAGAAAGCACCATCTTTCTCCCTATTTTGTTTGCTTCACCAAGTGTTTTGCTTTTGTACTGAGTATTTTAGGAAGCCTCGTCTGTGATTAGTTAAGTTTTATGTTGGAATGCATGCTCTGTTTCTCGTTCTGAAATATATTGGAAGATAATGGGTTTGAAACTTTATTATGAAGACTGATTTTTACCTCTTTATTGGCCAGAAAATTGCTTTTTCATTTTTATTTTTATAAAAAGCAACGACACCATTTTTTTGAATGCCTTTTTTTTTCATAATTTCTTTCAAAATCATCTGCTTTTGGTTCGTTTCTGTGAAATGTTTGAATACAGAGAGCATATATAGGAAGCCAAATTGGAACCTTAATGTCAAGATTGATGTCAACTGTATTTTAAGCACCCTCTCTCCGTAATTCACAATCACAATCCAAAATGGAACAAGTTTTATCATTCAACTGTAACAATGCCTCCTTACGTTAATATTCTTTAGAAGAGAAGTTTTGCTCACTCTCTTTTTTCTGCCCAACAATCATATGTACTCAGTTTCAGTTGTGTTTCTTGCAGTATGTTCAGTACTTCAGTAGTTCTATGTCAGAAACTTTGGTGATATCTGATGAAAATGAAACTTCTAAACGGAGGAAAGTTTCAGAGGACGTTGATCATAGAAGTGTTGGAGGGGAAAGGAGCACTGGTAATAATTAATCTGCTGAAGTAATAGTAATAGTAGCTTTTTGTGGCCAATATACTTTGAAGTTGCAATTGTTGGTTATTGTGCCTCCACTGATTTCTAATTTTGTTTGTTGTATTTCACCTTGATAACATCAGATGAACATGCTAAAGAAACTTCTTTGATTTCTACAAAGAGTGAGGCAAAAGTAGAGAAATGTTCTCCTATTTCACTGGTGAAGCTGACACGAAGTGGTTTGCTTTTGTTTACCTTTACAAAGGATATCTCTCCTGATACTGTTTATATTGTCAAAGACATAATGCAGTCTCTAGAAGCAAGGACTTTGAAGTCACTCGCGTAAGTAGTTTCTTGACTTTGAAGTCACTCGCGTAAGTAGTTTCTTACTCATTTGATCTGAGTTTACCATTTCAATTAAGAATAGTTTGAATGAGCTTATTATTTTCTACATGTGTTTGACATTTTTTTTTTTTTGCTTGCATTTGCTAGAAATTTATATGGTTATTAGGGCTTTCATTTGGTAGTTCATACTTTTCCAAGTAGTTATTGGGGCAACTAACGTCGGAAATTTATTGTTTTAGTGGTTATGTTATTTTTATCTCTACCTTTTGCTGATTGTTTTTTCTTAAGCGAGGAGGAACATTTTCATTGATTGTAAGAGTTGCATGCATTGTAACACTATTCTTGTGTATAATGTTTGTATAGAGTTTTGGAAATAGTTTTTGTAAAGGTTTGATTTGTGTGGCTTTGTTGTGTGTGTGCATGCGCGTGTTTGCTTGTCAAATGATGTTTGTGTGAGCCTTACTTGTCAAGTGATGTTTGTGTGAGCCTTACGAGAGTTGTTGGGTGTCACATCCAACAAGATGTTTGGGAGAGTTGATGAGAGTGATTGATTCCAATTAATCATATGAGTGAACCACATTATGGTGAGGAAGGCTGGCTAAGGGAAGTCCTGGAAACCCGTGACCCATGCACATGGGCAGGTAGCCTACAGAACCTCTTATTGCTTCACGGGCAAGGCAGAAAAATATGGTTCGAAATTAGGCCCAGCTCATGACAAGTGGTGTCAGTGCAACTACGAAAAAAAGCTTTACACTAGAGTTGAAAAAATTGATTTCATTAAATTAGTACTGTTAGAATTTGTGGGCTTGGCCCAAGGAAGGATTTACTCTAATTTCTTTTCCTTTTTTATCATTACCATGTTGCCTAGTTATCTTCCCTCTTGTATCTTTTGTTAATATGAGAAATTAATAAGAAAGTCAAATCCTGGTTTTTCTCTCGGTACTCGGGTTTCCACGTAACTCAAGTGTCTATTTTCTATATTGTTAAACCTTTTAACAAGTACATTTCATAGTTAGAGCAACTATGAAACTATGAAATTGGAGTTGAAGCAACTCTATTTCATGAAATTACTTAAATGCATTTGTCTGCTCGTGACTAAATATCTGGTTTCGTTCATTTCTTTCTCCCCAAGAGAAATAAGAGAAAGGCGAAGCCATAATAACTTATTCGCACCATGAAGAGATGACAAACTAGAAGATAAAAAATGAAAATGTATACACAATAATGAATGAATTAATTATTTTCTTTGTGCAGTTGGTGCCATCGCATATTCCCCATCCAGGCTACTTGCTGCTTGAATGAAAACGATCTCCAGGGCGTTGTATCAAAGCTTGTTCTTCATTTCAAAAGGGATAAAGGAAACCTTCTTTCACACCCTGTAAAGGTAAAGCTTTGGCGATTTTCATTAGCGAGTGAAGATTATTTTCCTCCCTTTTTCTATCCTTTTTATTAGCCAATGAAGCTTGGTCATCCATGAGAGATAGATGGCAAGCTCCAGGGCCTTATTTTTCTTTCTTTTCGTCGTACTTTCGACATTTATTTACGTCTTTGTTGTAGTTTGCAGTAGGGTACAACAGAAGAGGAATTGAAGAGACAGAGATGAAGAACACTTCTGAAGATGGTTCTGGTGCTAATGTTATGCTGGGACGCGATAAATGTTTTAGCATTGTGGCTGCTGCGGTGAAAGGTGTGGTCTCAGACGCCGTTGTAGATTTGAAATCTCCAGAGGTGAATGAATTACTATAATTATGGCCGTTTGGCACATAGATCTTTCATGCTATTTCGTGTCATAATTTTGTTCTTCGCTCATTGATTATCGTACAGCTTTGCGTTCTTGTTGAGCTGCTTCCTGTTTCTGGGTTGCCTCCTGGATCATCGGTAGTGGGGGTTTCGGTTCTTTCAAACAATCTTGTTACTACGAAGCCTCGACTTTGCATCAAAGCTTTGACTTCAGATACCAAAGCAAAGAGCTGAAGGCATAAATTCAAAATTTCAATGGAACGATTATTATTAGACTGTCGATATCAGGAATGGATAAGTTGGGAAACTTCATCAATTATGGAAGAAATGTTAGAGTGAAAATTTCGAAGGAAGAAGATTTGTCTCAATCAGCTCAATGCAGTCAGTATTATTAACTTTAATTGAGATTTGTAATCTATCTTGTTTTGTATTGTTTCTAACTTTATCTGACCGTTTCTAGTTGCACAATGATAGGCCCTACGATTGATGTTTTTCATCTCACAAAA

mRNA sequence

AGATCATCGGCCAAAGCAATTTAGAAGTACAAACACCTAAATGACAGAGACAGAAGAACAGAACAATGGCTGCCACCTCAAACCTGAAGCAGAAGCTTCCAAACCTGCAGAAAATGTCGCTGAAACCGAAAGGAAAACGATGACGCCATGGGAGCAGCACTCTGCTGTCATAAGCATCCCTCGTTTCGACTACAATGCACCGTCTGCGCTTCTTCACCGTTGCCAGTCTGGATTCCTCATCACTTGCACTATCAAGAGGGAGAAGAGTGCCACCAAAGAAGCTATCTCCATCCTTGAAAAGGTGCTTCACGGTCGCGCCAATACGTATGACAGACTCGCCAGGATTATACCCTCGTTAGTTGGCTCTTTTTGCAGTATTCTCTGCTATAAGGTAGCAGAAGATTTGGACCATATTTTGTGGAGCTGTGACTGTTATGTTCAGTACTTCAGTAGTTCTATGTCAGAAACTTTGGTGATATCTGATGAAAATGAAACTTCTAAACGGAGGAAAGTTTCAGAGGACGTTGATCATAGAAGTGTTGGAGGGGAAAGGAGCACTGATGAACATGCTAAAGAAACTTCTTTGATTTCTACAAAGAGTGAGGCAAAAGTAGAGAAATGTTCTCCTATTTCACTGGTGAAGCTGACACGAAGTGGTTTGCTTTTGTTTACCTTTACAAAGGATATCTCTCCTGATACTGTTTATATTGTCAAAGACATAATGCAGTCTCTAGAAGCAAGGACTTTGAAGTCACTCGCTTGGTGCCATCGCATATTCCCCATCCAGGCTACTTGCTGCTTGAATGAAAACGATCTCCAGGGCGTTGTATCAAAGCTTGTTCTTCATTTCAAAAGGGATAAAGGAAACCTTCTTTCACACCCTGTAAAGTTTGCAGTAGGGTACAACAGAAGAGGAATTGAAGAGACAGAGATGAAGAACACTTCTGAAGATGGTTCTGGTGCTAATGTTATGCTGGGACGCGATAAATGTTTTAGCATTGTGGCTGCTGCGGTGAAAGGTGTGGTCTCAGACGCCGTTGTAGATTTGAAATCTCCAGAGCTTTGCGTTCTTGTTGAGCTGCTTCCTGTTTCTGGGTTGCCTCCTGGATCATCGGTAGTGGGGGTTTCGGTTCTTTCAAACAATCTTGTTACTACGAAGCCTCGACTTTGCATCAAAGCTTTGACTTCAGATACCAAAGCAAAGAGCTGAAGGCATAAATTCAAAATTTCAATGGAACGATTATTATTAGACTGTCGATATCAGGAATGGATAAGTTGGGAAACTTCATCAATTATGGAAGAAATGTTAGAGTGAAAATTTCGAAGGAAGAAGATTTGTCTCAATCAGCTCAATGCAGTCAGTATTATTAACTTTAATTGAGATTTGTAATCTATCTTGTTTTGTATTGTTTCTAACTTTATCTGACCGTTTCTAGTTGCACAATGATAGGCCCTACGATTGATGTTTTTCATCTCACAAAA

Coding sequence (CDS)

ATGACAGAGACAGAAGAACAGAACAATGGCTGCCACCTCAAACCTGAAGCAGAAGCTTCCAAACCTGCAGAAAATGTCGCTGAAACCGAAAGGAAAACGATGACGCCATGGGAGCAGCACTCTGCTGTCATAAGCATCCCTCGTTTCGACTACAATGCACCGTCTGCGCTTCTTCACCGTTGCCAGTCTGGATTCCTCATCACTTGCACTATCAAGAGGGAGAAGAGTGCCACCAAAGAAGCTATCTCCATCCTTGAAAAGGTGCTTCACGGTCGCGCCAATACGTATGACAGACTCGCCAGGATTATACCCTCGTTAGTTGGCTCTTTTTGCAGTATTCTCTGCTATAAGGTAGCAGAAGATTTGGACCATATTTTGTGGAGCTGTGACTGTTATGTTCAGTACTTCAGTAGTTCTATGTCAGAAACTTTGGTGATATCTGATGAAAATGAAACTTCTAAACGGAGGAAAGTTTCAGAGGACGTTGATCATAGAAGTGTTGGAGGGGAAAGGAGCACTGATGAACATGCTAAAGAAACTTCTTTGATTTCTACAAAGAGTGAGGCAAAAGTAGAGAAATGTTCTCCTATTTCACTGGTGAAGCTGACACGAAGTGGTTTGCTTTTGTTTACCTTTACAAAGGATATCTCTCCTGATACTGTTTATATTGTCAAAGACATAATGCAGTCTCTAGAAGCAAGGACTTTGAAGTCACTCGCTTGGTGCCATCGCATATTCCCCATCCAGGCTACTTGCTGCTTGAATGAAAACGATCTCCAGGGCGTTGTATCAAAGCTTGTTCTTCATTTCAAAAGGGATAAAGGAAACCTTCTTTCACACCCTGTAAAGTTTGCAGTAGGGTACAACAGAAGAGGAATTGAAGAGACAGAGATGAAGAACACTTCTGAAGATGGTTCTGGTGCTAATGTTATGCTGGGACGCGATAAATGTTTTAGCATTGTGGCTGCTGCGGTGAAAGGTGTGGTCTCAGACGCCGTTGTAGATTTGAAATCTCCAGAGCTTTGCGTTCTTGTTGAGCTGCTTCCTGTTTCTGGGTTGCCTCCTGGATCATCGGTAGTGGGGGTTTCGGTTCTTTCAAACAATCTTGTTACTACGAAGCCTCGACTTTGCATCAAAGCTTTGACTTCAGATACCAAAGCAAAGAGCTGA

Protein sequence

MTETEEQNNGCHLKPEAEASKPAENVAETERKTMTPWEQHSAVISIPRFDYNAPSALLHRCQSGFLITCTIKREKSATKEAISILEKVLHGRANTYDRLARIIPSLVGSFCSILCYKVAEDLDHILWSCDCYVQYFSSSMSETLVISDENETSKRRKVSEDVDHRSVGGERSTDEHAKETSLISTKSEAKVEKCSPISLVKLTRSGLLLFTFTKDISPDTVYIVKDIMQSLEARTLKSLAWCHRIFPIQATCCLNENDLQGVVSKLVLHFKRDKGNLLSHPVKFAVGYNRRGIEETEMKNTSEDGSGANVMLGRDKCFSIVAAAVKGVVSDAVVDLKSPELCVLVELLPVSGLPPGSSVVGVSVLSNNLVTTKPRLCIKALTSDTKAKS

Homology

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BLAST of PI0018871 vs. ExPASy TrEMBL
Match: A0A0A0KQX3 (THUMP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G273440 PE=4 SV=1)

HSP 1 Score: 605.9 bits (1561), Expect = 1.2e-169
Identity = 324/389 (83.29%), Postives = 332/389 (85.35%), Query Frame = 0


Query: 1   MTETEEQNNGCHLKPEAEASKPAENVAETERKTMTPWEQHSAVISIPRFDYNAPSALLHR 60
           M ETEEQNNGCHLKPEAEA K AENVAETERK MTPWEQHSAVISIPRFDYNAPSALLHR
Sbjct: 1   MAETEEQNNGCHLKPEAEAFKRAENVAETERKMMTPWEQHSAVISIPRFDYNAPSALLHR 60

Query: 61  CQSGFLITCTIKREKSATKEAISILEKVLHGRANTYDRLARIIPSLVGSFCSILCYKVAE 120
           CQ+GFLITCTIKREKSATKEAISIL+K                                 
Sbjct: 61  CQTGFLITCTIKREKSATKEAISILQK--------------------------------- 120

Query: 121 DLDHILWSCDCYVQYFSSSMSETLVISDENETSKRRKVSEDVDHRSVGGERSTDEHAKET 180
                      YVQYF+SSMSETLV+SDENETSKRRKVSEDVDHRSVGGE STDEHAKET
Sbjct: 121 -----------YVQYFNSSMSETLVVSDENETSKRRKVSEDVDHRSVGGESSTDEHAKET 180

Query: 181 SLISTKSEAKVEKCSPISLVKLTRSGLLLFTFTKDISPDTVYIVKDIMQSLEARTLKSLA 240
           SLISTKSEAKVEKCSPISLVKLTRSGLLLFTFTKDISPDTVYIVKDIMQSLEARTLKSLA
Sbjct: 181 SLISTKSEAKVEKCSPISLVKLTRSGLLLFTFTKDISPDTVYIVKDIMQSLEARTLKSLA 240

Query: 241 WCHRIFPIQATCCLNENDLQGVVSKLVLHFKRDKGNLLSHPVKFAVGYNRRGIEETEMKN 300
           WCHRIFPIQATC LNENDLQGVVSKLVLHF  DKGN+LSHPVKFA+GYNRRGIEETEMK 
Sbjct: 241 WCHRIFPIQATCSLNENDLQGVVSKLVLHFMNDKGNILSHPVKFAIGYNRRGIEETEMKK 300

Query: 301 TSEDGSGANVMLGRDKCFSIVAAAVKGVVSDAVVDLKSPELCVLVELLPVSGLPPGSSVV 360
           T ED SG NV+LGRDKCFSIVAAAVKGVVSDA+VDLKSPELCVLVELLPVSGLP GSSVV
Sbjct: 301 TFEDSSGVNVILGRDKCFSIVAAAVKGVVSDAIVDLKSPELCVLVELLPVSGLPSGSSVV 345

Query: 361 GVSVLSNNLVTTKPRLCIKALTSDTKAKS 390
           GVSVLSNNLVTTKPRLCIKALTSDTKAKS
Sbjct: 361 GVSVLSNNLVTTKPRLCIKALTSDTKAKS 345

[Close]

BLAST of PI0018871 vs. ExPASy TrEMBL
Match: A0A1S3CD85 (uncharacterized protein LOC103499095 OS=Cucumis melo OX=3656 GN=LOC103499095 PE=4 SV=1)

HSP 1 Score: 563.5 bits (1451), Expect = 6.7e-157
Identity = 306/377 (81.17%), Postives = 316/377 (83.82%), Query Frame = 0


Query: 13  LKPEAEASKPAENVAETERKTMTPWEQHSAVISIPRFDYNAPSALLHRCQSGFLITCTIK 72
           +KPEAEASK AENVAETERKTMTPWEQHSAVIS+PRFDYNAPSALLHRCQSGFLITCTIK
Sbjct: 4   VKPEAEASKRAENVAETERKTMTPWEQHSAVISLPRFDYNAPSALLHRCQSGFLITCTIK 63

Query: 73  REKSATKEAISILEKVLHGRANTYDRLARIIPSLVGSFCSILCYKVAEDLDHILWSCDCY 132
           REKSATKEAI ILEK                                            Y
Sbjct: 64  REKSATKEAIFILEK--------------------------------------------Y 123

Query: 133 VQYFSSSMSETLVISDENETSKRRKVSEDVDHRSVGGERSTDEHAKETSLISTKSEAKVE 192
           VQYFSSSM+ETLVISDENETSKRRKVSED+DH SVGGER+TDEHAKETSLISTKSEAKVE
Sbjct: 124 VQYFSSSMTETLVISDENETSKRRKVSEDIDHISVGGERNTDEHAKETSLISTKSEAKVE 183

Query: 193 KCSPISLVKLTRSGLLLFTFTKDISPDTVYIVKDIMQSLEARTLKSLAWCHRIFPIQATC 252
           KCSPISLVKLTRSGLLLFTFTKDISPDTVYIVKDIMQSLEARTLKSLAWCHRIFPIQATC
Sbjct: 184 KCSPISLVKLTRSGLLLFTFTKDISPDTVYIVKDIMQSLEARTLKSLAWCHRIFPIQATC 243

Query: 253 CLNENDLQGVVSKLVLHFKRDKGNLLSHPVKFAVGYNRRGIEETEMKNTSEDGSGANVML 312
            LNENDLQGVVSKLVLHF +DKGN+LSHPVKFAVGYNRRG+         ED SGANV+L
Sbjct: 244 SLNENDLQGVVSKLVLHFMKDKGNILSHPVKFAVGYNRRGM---------EDSSGANVIL 303

Query: 313 GRDKCFSIVAAAVKGVVSDAVVDLKSPELCVLVELLPVSGLPPGSSVVGVSVLSNNLVTT 372
           GRDKCFSIVAAAVKGVVSD +VDLKSPELCVLVELLPVSGLPPGSSVVGVSVLSNNLVTT
Sbjct: 304 GRDKCFSIVAAAVKGVVSDVIVDLKSPELCVLVELLPVSGLPPGSSVVGVSVLSNNLVTT 327

Query: 373 KPRLCIKALTSDTKAKS 390
           KPRLCIKALTSD KAKS
Sbjct: 364 KPRLCIKALTSDAKAKS 327

[Close]

BLAST of PI0018871 vs. ExPASy TrEMBL
Match: A0A6J1DWW8 (uncharacterized protein LOC111024819 OS=Momordica charantia OX=3673 GN=LOC111024819 PE=4 SV=1)

HSP 1 Score: 487.3 bits (1253), Expect = 6.1e-134
Identity = 276/391 (70.59%), Postives = 297/391 (75.96%), Query Frame = 0


Query: 1   MTETEEQNNGCHLKPEAEASKPAENVAETERKTMTPWEQHSAVISIPRFDYNAPSALLHR 60
           M E E  NNG   KP AEASK  ENVAE   KTMTPWEQHS VISIPRFDYNAPSALLH 
Sbjct: 1   MAEKEANNNGYQPKPVAEASKATENVAENGGKTMTPWEQHSGVISIPRFDYNAPSALLHH 60

Query: 61  CQSGFLITCTIKREKSATKEAISILEKVLHGRANTYDRLARIIPSLVGSFCSILCYKVAE 120
           C SGFLITC+IKREKSATKEAISILEK                                 
Sbjct: 61  CHSGFLITCSIKREKSATKEAISILEK--------------------------------- 120

Query: 121 DLDHILWSCDCYVQYFSSSMSETLVISDENETSKRRKV-SEDVDHRSV-GGERSTDEHAK 180
                      Y+QYFSSS  E L +SDENE SKRRK+ +EDVDH+SV G ERS+DEH +
Sbjct: 121 -----------YIQYFSSSTPENLEVSDENEVSKRRKICTEDVDHKSVKGEERSSDEHVE 180

Query: 181 ETSLISTKSEAKVEKCSPISLVKLTRSGLLLFTFTKDISPDTVYIVKDIMQSLEARTLKS 240
            TS+ STK EA+VEK SPISLVKLTRSGL+LFT  KDISPDTV+IV DI+QSLEA TLKS
Sbjct: 181 GTSMNSTKCEARVEKSSPISLVKLTRSGLVLFTLPKDISPDTVFIVLDIIQSLEAGTLKS 240

Query: 241 LAWCHRIFPIQATCCLNENDLQGVVSKLVLHFKRDKGNLLSHPVKFAVGYNRRGIEETEM 300
            AWCHRIFPIQATCCLNE DLQ VVSKLVL F ++K N+LSHPVKFAVGYNRRGIEETEM
Sbjct: 241 PAWCHRIFPIQATCCLNEKDLQAVVSKLVLRFLKNKENILSHPVKFAVGYNRRGIEETEM 300

Query: 301 KNTSEDGSGANVMLGRDKCFSIVAAAVKGVVSDAVVDLKSPELCVLVELLPVSGLPPGSS 360
           K T +D SGANVM  RDKCFSIVAAAVK VVS+AVVDLKSPE CVLVELLP+SGLP  S 
Sbjct: 301 K-TCKDSSGANVMASRDKCFSIVAAAVKDVVSNAVVDLKSPEFCVLVELLPLSGLPLPSL 346

Query: 361 VVGVSVLSNNLVTTKPRLCIKALTSDTKAKS 390
           VVGVSVL ++LVTTKPRLCIKALTSDTKAKS
Sbjct: 361 VVGVSVLPSDLVTTKPRLCIKALTSDTKAKS 346

[Close]

BLAST of PI0018871 vs. ExPASy TrEMBL
Match: A0A6J1K4P7 (uncharacterized protein LOC111490047 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111490047 PE=4 SV=1)

HSP 1 Score: 481.9 bits (1239), Expect = 2.6e-132
Identity = 275/387 (71.06%), Postives = 297/387 (76.74%), Query Frame = 0


Query: 5   EEQNNGCHLKPEAEASKPAENVAETERKTMTPWEQHSAVISIPRFDYNAPSALLHRCQSG 64
           +EQ  GC  K  AEASK  ENVAETERKTMTPWEQHSAVISIPRFDYNAPSALLH  QSG
Sbjct: 4   KEQFYGCRPKHVAEASK--ENVAETERKTMTPWEQHSAVISIPRFDYNAPSALLHHRQSG 63

Query: 65  FLITCTIKREKSATKEAISILEKVLHGRANTYDRLARIIPSLVGSFCSILCYKVAEDLDH 124
           FLITC IKREKSATKEAISILEK                                     
Sbjct: 64  FLITCAIKREKSATKEAISILEK------------------------------------- 123

Query: 125 ILWSCDCYVQYFSSSMSETLVISDENETSKRRKV-SEDVDHRSVGGE-RSTDEHAKETSL 184
                  Y QYFS+S  ET   SDENETSKRRKV +ED+DH+SV  E RSTDEH   TS 
Sbjct: 124 -------YSQYFSNSTPETSESSDENETSKRRKVCTEDIDHKSVENEGRSTDEHVNGTST 183

Query: 185 ISTKSEAKVEKCSPISLVKLTRSGLLLFTFTKDISPDTVYIVKDIMQSLEARTLKSLAWC 244
           IST+S AKVEKCSPISLVKLTRSGLLL TF KDISPDTVYIV D++QSLEA TLKS AWC
Sbjct: 184 ISTRSGAKVEKCSPISLVKLTRSGLLLLTFAKDISPDTVYIVSDLIQSLEAGTLKSPAWC 243

Query: 245 HRIFPIQATCCLNENDLQGVVSKLVLHFKRDKGNLLSHPVKFAVGYNRRGIEETEMKNTS 304
           HRIFPIQ+TCCLNENDL+GVVS LVL F +DKGN LSHPVKFAVGYNRRGIEETEMK T 
Sbjct: 244 HRIFPIQSTCCLNENDLRGVVSNLVLQFMKDKGNSLSHPVKFAVGYNRRGIEETEMK-TC 303

Query: 305 EDGSGANVMLGRDKCFSIVAAAVKGVVSDAVVDLKSPELCVLVELLPVSGLPPGSSVVGV 364
           +D SGA +++GRDKCFS+VAAAVK VVS+ +VDLKSPELC+L+ELLP+SGLP  S VVGV
Sbjct: 304 KDSSGA-IVMGRDKCFSVVAAAVKDVVSNTIVDLKSPELCILIELLPLSGLPLESLVVGV 342

Query: 365 SVLSNNLVTTKPRLCIKALTSDTKAKS 390
           SVL +NLVTTKPRLCIKALTSD KAKS
Sbjct: 364 SVLPSNLVTTKPRLCIKALTSDPKAKS 342

[Close]

BLAST of PI0018871 vs. ExPASy TrEMBL
Match: A0A6J1EPS0 (uncharacterized protein LOC111436464 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111436464 PE=4 SV=1)

HSP 1 Score: 475.3 bits (1222), Expect = 2.4e-130
Identity = 273/387 (70.54%), Postives = 296/387 (76.49%), Query Frame = 0


Query: 5   EEQNNGCHLKPEAEASKPAENVAETERKTMTPWEQHSAVISIPRFDYNAPSALLHRCQSG 64
           +EQ  GC  K  AEASK  ENVAETERKTMTPWEQHSAVISIPRFDYNAPSALLH  QSG
Sbjct: 4   KEQFYGCRPKHVAEASK--ENVAETERKTMTPWEQHSAVISIPRFDYNAPSALLHHRQSG 63

Query: 65  FLITCTIKREKSATKEAISILEKVLHGRANTYDRLARIIPSLVGSFCSILCYKVAEDLDH 124
           FLITC IKREKSATKEAISILEK                                     
Sbjct: 64  FLITCAIKREKSATKEAISILEK------------------------------------- 123

Query: 125 ILWSCDCYVQYFSSSMSETLVISDENETSKRRKV-SEDVDHRSVGGE-RSTDEHAKETSL 184
                  Y QYFS+S  ET   SDENETSKRRKV +ED+D++S   E RSTDEH   TS 
Sbjct: 124 -------YSQYFSNSTPETSESSDENETSKRRKVCTEDIDYKSFEDEGRSTDEHVNGTST 183

Query: 185 ISTKSEAKVEKCSPISLVKLTRSGLLLFTFTKDISPDTVYIVKDIMQSLEARTLKSLAWC 244
           IST+S AKVEKCSPISLVKLTRSGLLL TF KDISPDTVYIV D++QSLEA TLKS AWC
Sbjct: 184 ISTRSGAKVEKCSPISLVKLTRSGLLLLTFAKDISPDTVYIVSDLIQSLEAGTLKSPAWC 243

Query: 245 HRIFPIQATCCLNENDLQGVVSKLVLHFKRDKGNLLSHPVKFAVGYNRRGIEETEMKNTS 304
           HRIFPIQ+TCCLNENDL+GVVSKLVL F +DK N LSHPVKFAVGYNRRGIEETEMK TS
Sbjct: 244 HRIFPIQSTCCLNENDLRGVVSKLVLQFMKDKVNSLSHPVKFAVGYNRRGIEETEMK-TS 303

Query: 305 EDGSGANVMLGRDKCFSIVAAAVKGVVSDAVVDLKSPELCVLVELLPVSGLPPGSSVVGV 364
           +D SGA +++GRDKCFS+VAAAVK VVS+A+VDLKSPELC+L+ELLP+SGLP  S VVGV
Sbjct: 304 KDSSGA-IVMGRDKCFSVVAAAVKDVVSNAIVDLKSPELCILIELLPLSGLPLESLVVGV 342

Query: 365 SVLSNNLVTTKPRLCIKALTSDTKAKS 390
           SVL + LVTTKPRLCIKALTSD K KS
Sbjct: 364 SVLPSKLVTTKPRLCIKALTSDPKTKS 342

[Close]

BLAST of PI0018871 vs. NCBI nr
Match: XP_011655096.1 (uncharacterized protein LOC101219243 isoform X1 [Cucumis sativus] >XP_031741947.1 uncharacterized protein LOC116401651 isoform X1 [Cucumis sativus])

HSP 1 Score: 605.9 bits (1561), Expect = 2.4e-169
Identity = 324/389 (83.29%), Postives = 332/389 (85.35%), Query Frame = 0


Query: 1   MTETEEQNNGCHLKPEAEASKPAENVAETERKTMTPWEQHSAVISIPRFDYNAPSALLHR 60
           M ETEEQNNGCHLKPEAEA K AENVAETERK MTPWEQHSAVISIPRFDYNAPSALLHR
Sbjct: 1   MAETEEQNNGCHLKPEAEAFKRAENVAETERKMMTPWEQHSAVISIPRFDYNAPSALLHR 60

Query: 61  CQSGFLITCTIKREKSATKEAISILEKVLHGRANTYDRLARIIPSLVGSFCSILCYKVAE 120
           CQ+GFLITCTIKREKSATKEAISIL+K                                 
Sbjct: 61  CQTGFLITCTIKREKSATKEAISILQK--------------------------------- 120

Query: 121 DLDHILWSCDCYVQYFSSSMSETLVISDENETSKRRKVSEDVDHRSVGGERSTDEHAKET 180
                      YVQYF+SSMSETLV+SDENETSKRRKVSEDVDHRSVGGE STDEHAKET
Sbjct: 121 -----------YVQYFNSSMSETLVVSDENETSKRRKVSEDVDHRSVGGESSTDEHAKET 180

Query: 181 SLISTKSEAKVEKCSPISLVKLTRSGLLLFTFTKDISPDTVYIVKDIMQSLEARTLKSLA 240
           SLISTKSEAKVEKCSPISLVKLTRSGLLLFTFTKDISPDTVYIVKDIMQSLEARTLKSLA
Sbjct: 181 SLISTKSEAKVEKCSPISLVKLTRSGLLLFTFTKDISPDTVYIVKDIMQSLEARTLKSLA 240

Query: 241 WCHRIFPIQATCCLNENDLQGVVSKLVLHFKRDKGNLLSHPVKFAVGYNRRGIEETEMKN 300
           WCHRIFPIQATC LNENDLQGVVSKLVLHF  DKGN+LSHPVKFA+GYNRRGIEETEMK 
Sbjct: 241 WCHRIFPIQATCSLNENDLQGVVSKLVLHFMNDKGNILSHPVKFAIGYNRRGIEETEMKK 300

Query: 301 TSEDGSGANVMLGRDKCFSIVAAAVKGVVSDAVVDLKSPELCVLVELLPVSGLPPGSSVV 360
           T ED SG NV+LGRDKCFSIVAAAVKGVVSDA+VDLKSPELCVLVELLPVSGLP GSSVV
Sbjct: 301 TFEDSSGVNVILGRDKCFSIVAAAVKGVVSDAIVDLKSPELCVLVELLPVSGLPSGSSVV 345

Query: 361 GVSVLSNNLVTTKPRLCIKALTSDTKAKS 390
           GVSVLSNNLVTTKPRLCIKALTSDTKAKS
Sbjct: 361 GVSVLSNNLVTTKPRLCIKALTSDTKAKS 345

[Close]

BLAST of PI0018871 vs. NCBI nr
Match: XP_008460211.1 (PREDICTED: uncharacterized protein LOC103499095 [Cucumis melo])

HSP 1 Score: 563.5 bits (1451), Expect = 1.4e-156
Identity = 306/377 (81.17%), Postives = 316/377 (83.82%), Query Frame = 0


Query: 13  LKPEAEASKPAENVAETERKTMTPWEQHSAVISIPRFDYNAPSALLHRCQSGFLITCTIK 72
           +KPEAEASK AENVAETERKTMTPWEQHSAVIS+PRFDYNAPSALLHRCQSGFLITCTIK
Sbjct: 4   VKPEAEASKRAENVAETERKTMTPWEQHSAVISLPRFDYNAPSALLHRCQSGFLITCTIK 63

Query: 73  REKSATKEAISILEKVLHGRANTYDRLARIIPSLVGSFCSILCYKVAEDLDHILWSCDCY 132
           REKSATKEAI ILEK                                            Y
Sbjct: 64  REKSATKEAIFILEK--------------------------------------------Y 123

Query: 133 VQYFSSSMSETLVISDENETSKRRKVSEDVDHRSVGGERSTDEHAKETSLISTKSEAKVE 192
           VQYFSSSM+ETLVISDENETSKRRKVSED+DH SVGGER+TDEHAKETSLISTKSEAKVE
Sbjct: 124 VQYFSSSMTETLVISDENETSKRRKVSEDIDHISVGGERNTDEHAKETSLISTKSEAKVE 183

Query: 193 KCSPISLVKLTRSGLLLFTFTKDISPDTVYIVKDIMQSLEARTLKSLAWCHRIFPIQATC 252
           KCSPISLVKLTRSGLLLFTFTKDISPDTVYIVKDIMQSLEARTLKSLAWCHRIFPIQATC
Sbjct: 184 KCSPISLVKLTRSGLLLFTFTKDISPDTVYIVKDIMQSLEARTLKSLAWCHRIFPIQATC 243

Query: 253 CLNENDLQGVVSKLVLHFKRDKGNLLSHPVKFAVGYNRRGIEETEMKNTSEDGSGANVML 312
            LNENDLQGVVSKLVLHF +DKGN+LSHPVKFAVGYNRRG+         ED SGANV+L
Sbjct: 244 SLNENDLQGVVSKLVLHFMKDKGNILSHPVKFAVGYNRRGM---------EDSSGANVIL 303

Query: 313 GRDKCFSIVAAAVKGVVSDAVVDLKSPELCVLVELLPVSGLPPGSSVVGVSVLSNNLVTT 372
           GRDKCFSIVAAAVKGVVSD +VDLKSPELCVLVELLPVSGLPPGSSVVGVSVLSNNLVTT
Sbjct: 304 GRDKCFSIVAAAVKGVVSDVIVDLKSPELCVLVELLPVSGLPPGSSVVGVSVLSNNLVTT 327

Query: 373 KPRLCIKALTSDTKAKS 390
           KPRLCIKALTSD KAKS
Sbjct: 364 KPRLCIKALTSDAKAKS 327

[Close]

BLAST of PI0018871 vs. NCBI nr
Match: XP_038892499.1 (uncharacterized protein LOC120081569 isoform X1 [Benincasa hispida])

HSP 1 Score: 536.6 bits (1381), Expect = 1.8e-148
Identity = 300/391 (76.73%), Postives = 314/391 (80.31%), Query Frame = 0


Query: 1   MTETEEQNNGCHLKPEAEASKPAENVAETERKTMTPWEQHSAVISIPRFDYNAPSALLHR 60
           M E EEQ NGCHLKP AEASKP ENV ETE KTMTPWEQHSAVISIPRFDYNAPSALL R
Sbjct: 1   MAEKEEQINGCHLKPVAEASKPTENVPETEWKTMTPWEQHSAVISIPRFDYNAPSALLQR 60

Query: 61  CQSGFLITCTIKREKSATKEAISILEKVLHGRANTYDRLARIIPSLVGSFCSILCYKVAE 120
           CQSGFLITC+IKREKSATKEAISILEK                                 
Sbjct: 61  CQSGFLITCSIKREKSATKEAISILEK--------------------------------- 120

Query: 121 DLDHILWSCDCYVQYFSSSMSETLVISDENETSKRRKV-SEDVDHRS-VGGERSTDEHAK 180
                      Y+QYFSSSM ETL +SDEN+TSKRRKV + DVD RS  G ERSTDEHA 
Sbjct: 121 -----------YIQYFSSSMPETLTVSDENKTSKRRKVCTGDVDPRSDEGVERSTDEHA- 180

Query: 181 ETSLISTKSEAKVEKCSPISLVKLTRSGLLLFTFTKDISPDTVYIVKDIMQSLEARTLKS 240
            TSLISTKSEAKVEKCSPISLVKLTRSGLLLFTF K+ISPDTVYIVKDI+Q LEA TLKS
Sbjct: 181 GTSLISTKSEAKVEKCSPISLVKLTRSGLLLFTFIKNISPDTVYIVKDIIQCLEAGTLKS 240

Query: 241 LAWCHRIFPIQATCCLNENDLQGVVSKLVLHFKRDKGNLLSHPVKFAVGYNRRGIEETEM 300
            AWCHRIFPIQATCCLNENDL  VVSKLVLHF +DKGN+LS PVKFAVGYNRRGIEETEM
Sbjct: 241 PAWCHRIFPIQATCCLNENDLHAVVSKLVLHFMKDKGNILSQPVKFAVGYNRRGIEETEM 300

Query: 301 KNTSEDGSGANVMLGRDKCFSIVAAAVKGVVSDAVVDLKSPELCVLVELLPVSGLPPGSS 360
           K TS+D SGANVMLGRDKCFSIVAAAVK VVS+A+VDLKSPELC+LVELLPVSGLP  S 
Sbjct: 301 KKTSKDSSGANVMLGRDKCFSIVAAAVKDVVSNAIVDLKSPELCILVELLPVSGLPLESL 346

Query: 361 VVGVSVLSNNLVTTKPRLCIKALTSDTKAKS 390
           VVGVSVL +NLVTTKPRLCIKALTSDTKAKS
Sbjct: 361 VVGVSVLPSNLVTTKPRLCIKALTSDTKAKS 346

[Close]

BLAST of PI0018871 vs. NCBI nr
Match: XP_022158307.1 (uncharacterized protein LOC111024819 [Momordica charantia])

HSP 1 Score: 487.3 bits (1253), Expect = 1.3e-133
Identity = 276/391 (70.59%), Postives = 297/391 (75.96%), Query Frame = 0


Query: 1   MTETEEQNNGCHLKPEAEASKPAENVAETERKTMTPWEQHSAVISIPRFDYNAPSALLHR 60
           M E E  NNG   KP AEASK  ENVAE   KTMTPWEQHS VISIPRFDYNAPSALLH 
Sbjct: 1   MAEKEANNNGYQPKPVAEASKATENVAENGGKTMTPWEQHSGVISIPRFDYNAPSALLHH 60

Query: 61  CQSGFLITCTIKREKSATKEAISILEKVLHGRANTYDRLARIIPSLVGSFCSILCYKVAE 120
           C SGFLITC+IKREKSATKEAISILEK                                 
Sbjct: 61  CHSGFLITCSIKREKSATKEAISILEK--------------------------------- 120

Query: 121 DLDHILWSCDCYVQYFSSSMSETLVISDENETSKRRKV-SEDVDHRSV-GGERSTDEHAK 180
                      Y+QYFSSS  E L +SDENE SKRRK+ +EDVDH+SV G ERS+DEH +
Sbjct: 121 -----------YIQYFSSSTPENLEVSDENEVSKRRKICTEDVDHKSVKGEERSSDEHVE 180

Query: 181 ETSLISTKSEAKVEKCSPISLVKLTRSGLLLFTFTKDISPDTVYIVKDIMQSLEARTLKS 240
            TS+ STK EA+VEK SPISLVKLTRSGL+LFT  KDISPDTV+IV DI+QSLEA TLKS
Sbjct: 181 GTSMNSTKCEARVEKSSPISLVKLTRSGLVLFTLPKDISPDTVFIVLDIIQSLEAGTLKS 240

Query: 241 LAWCHRIFPIQATCCLNENDLQGVVSKLVLHFKRDKGNLLSHPVKFAVGYNRRGIEETEM 300
            AWCHRIFPIQATCCLNE DLQ VVSKLVL F ++K N+LSHPVKFAVGYNRRGIEETEM
Sbjct: 241 PAWCHRIFPIQATCCLNEKDLQAVVSKLVLRFLKNKENILSHPVKFAVGYNRRGIEETEM 300

Query: 301 KNTSEDGSGANVMLGRDKCFSIVAAAVKGVVSDAVVDLKSPELCVLVELLPVSGLPPGSS 360
           K T +D SGANVM  RDKCFSIVAAAVK VVS+AVVDLKSPE CVLVELLP+SGLP  S 
Sbjct: 301 K-TCKDSSGANVMASRDKCFSIVAAAVKDVVSNAVVDLKSPEFCVLVELLPLSGLPLPSL 346

Query: 361 VVGVSVLSNNLVTTKPRLCIKALTSDTKAKS 390
           VVGVSVL ++LVTTKPRLCIKALTSDTKAKS
Sbjct: 361 VVGVSVLPSDLVTTKPRLCIKALTSDTKAKS 346

[Close]

BLAST of PI0018871 vs. NCBI nr
Match: XP_023553260.1 (uncharacterized protein LOC111810722 isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 484.2 bits (1245), Expect = 1.1e-132
Identity = 277/387 (71.58%), Postives = 298/387 (77.00%), Query Frame = 0


Query: 5   EEQNNGCHLKPEAEASKPAENVAETERKTMTPWEQHSAVISIPRFDYNAPSALLHRCQSG 64
           +EQ NGC  K  AEASK  ENVAETERKTMTPWEQHSAVISIPRFDYNAPSALLH  QSG
Sbjct: 4   KEQFNGCRPKHAAEASK--ENVAETERKTMTPWEQHSAVISIPRFDYNAPSALLHHRQSG 63

Query: 65  FLITCTIKREKSATKEAISILEKVLHGRANTYDRLARIIPSLVGSFCSILCYKVAEDLDH 124
           FLITC IKREKSATKEAISILEK                                     
Sbjct: 64  FLITCAIKREKSATKEAISILEK------------------------------------- 123

Query: 125 ILWSCDCYVQYFSSSMSETLVISDENETSKRRKV-SEDVDHRSVGGE-RSTDEHAKETSL 184
                  Y QYFS+S  ET   SDENETSKRRKV +ED+D++SV  E RSTDEH   TS 
Sbjct: 124 -------YSQYFSNSTPETSESSDENETSKRRKVCTEDIDYKSVEDEGRSTDEHVNGTST 183

Query: 185 ISTKSEAKVEKCSPISLVKLTRSGLLLFTFTKDISPDTVYIVKDIMQSLEARTLKSLAWC 244
           IST S AKVEKCSPISLVKLTRSGLLL TF KDISPDTVYIV D++QSLEA TLKS  WC
Sbjct: 184 ISTSSGAKVEKCSPISLVKLTRSGLLLLTFAKDISPDTVYIVSDLIQSLEAGTLKSPTWC 243

Query: 245 HRIFPIQATCCLNENDLQGVVSKLVLHFKRDKGNLLSHPVKFAVGYNRRGIEETEMKNTS 304
           HRIFPIQ+TCCLNENDL+GVVSKLVL F +DKGN LSHPVKFAVGYNRRGIEETEMK TS
Sbjct: 244 HRIFPIQSTCCLNENDLRGVVSKLVLQFMKDKGNSLSHPVKFAVGYNRRGIEETEMK-TS 303

Query: 305 EDGSGANVMLGRDKCFSIVAAAVKGVVSDAVVDLKSPELCVLVELLPVSGLPPGSSVVGV 364
           +D SGA +++GRDKCFS VAAAVK VVS+A+VDLKSPELC+L+ELLP+SGLP  S VVGV
Sbjct: 304 KDSSGA-IVMGRDKCFSAVAAAVKDVVSNAIVDLKSPELCILIELLPLSGLPLESLVVGV 342

Query: 365 SVLSNNLVTTKPRLCIKALTSDTKAKS 390
           SVL +NLVTTKPRLCIKALTSD KAKS
Sbjct: 364 SVLPSNLVTTKPRLCIKALTSDPKAKS 342

[Close]

BLAST of PI0018871 vs. TAIR 10
Match: AT1G09290.1 (unknown protein; Has 73 Blast hits to 71 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 5; Fungi - 11; Plants - 54; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). )

HSP 1 Score: 276.6 bits (706), Expect = 3.1e-74
Identity = 175/362 (48.34%), Postives = 215/362 (59.39%), Query Frame = 0


Query: 30  ERKTMTPWEQHSAVISIPRFDYNAPSALLHRCQSGFLITCTIKREKSATKEAISILEKVL 89
           E +T+TPWEQHS++ISIPRFDY APS+LLH   SGFL+TC IKREKSATKE +SIL K  
Sbjct: 28  EAETLTPWEQHSSIISIPRFDYKAPSSLLHHSHSGFLVTCNIKREKSATKEVMSILGK-- 87

Query: 90  HGRANTYDRLARIIPSLVGSFCSILCYKVAEDLDHILWSCDCYVQYFSSSMSETLVISDE 149
                            +GS        + E+   +L          S++  +  V + E
Sbjct: 88  ----------------YIGS--------MHEEKPEVL---------NSTASKKQKVCAQE 147

Query: 150 NETSKRRKVSEDVDHRSVGGERSTDEHAKETSLISTKSEAKVEKCSPISLVKLTRSGLLL 209
            E    + V  + D     GE    E  K          A  E  S +SLVKLT+SGLLL
Sbjct: 148 TEEGGEKTVPLENDALQETGENPNVEDLK---------LANEEHNSLMSLVKLTKSGLLL 207

Query: 210 FTFTKDISPDTVYIVKDIMQSLEARTLKSLAWCHRIFPIQATCCLNENDLQGVVSKLVLH 269
           FTF  + SP+T  IV  + QS+E+  LK+  WCHRIFP+QATC L E +L+  VSKLV  
Sbjct: 208 FTFPVENSPNTTNIVSRVFQSMESGALKAPIWCHRIFPVQATCGLTEKELRETVSKLVQR 267

Query: 270 FKRDKGNLLSHPVKFAVGYNRRGIEETEMKNTSEDGSGANV---MLGRDKCFSIVAAAVK 329
           F  DK N LS PVKFA GY RRG EET+ K   +D S   V   +L R KCF  VAA VK
Sbjct: 268 FVNDKDNTLSKPVKFAAGYQRRGAEETKGK-IRKDASDVLVQCPLLDRIKCFETVAAGVK 327

Query: 330 GVVSDAVVDLKSPELCVLVELLPVSGLPPGSSVVGVSVLSNNLVTTKPRLCIKALTSDTK 389
            +V D+VVDLKSPELCVLVELLP+S +  GS V  VSVL + LV+TKP+LCIK L  ++K
Sbjct: 328 DIVPDSVVDLKSPELCVLVELLPLSRISSGSFVAAVSVLPHRLVSTKPKLCIKPLVPESK 344

The following BLAST results are available for this feature:

BLAST of PI0018871 vs.


Match Name	E-value	Identity	Description

BLAST of PI0018871 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KQX3	1.2e-169	83.29	THUMP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G273440 PE=4 ...	[more]
A0A1S3CD85	6.7e-157	81.17	uncharacterized protein LOC103499095 OS=Cucumis melo OX=3656 GN=LOC103499095 PE=...	[more]
A0A6J1DWW8	6.1e-134	70.59	uncharacterized protein LOC111024819 OS=Momordica charantia OX=3673 GN=LOC111024...	[more]
A0A6J1K4P7	2.6e-132	71.06	uncharacterized protein LOC111490047 isoform X1 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1EPS0	2.4e-130	70.54	uncharacterized protein LOC111436464 isoform X1 OS=Cucurbita moschata OX=3662 GN...	[more]

BLAST of PI0018871 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011655096.1	2.4e-169	83.29	uncharacterized protein LOC101219243 isoform X1 [Cucumis sativus] >XP_031741947....	[more]
XP_008460211.1	1.4e-156	81.17	PREDICTED: uncharacterized protein LOC103499095 [Cucumis melo]	[more]
XP_038892499.1	1.8e-148	76.73	uncharacterized protein LOC120081569 isoform X1 [Benincasa hispida]	[more]
XP_022158307.1	1.3e-133	70.59	uncharacterized protein LOC111024819 [Momordica charantia]	[more]
XP_023553260.1	1.1e-132	71.58	uncharacterized protein LOC111810722 isoform X2 [Cucurbita pepo subsp. pepo]	[more]

BLAST of PI0018871 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G09290.1	3.1e-74	48.34	unknown protein; Has 73 Blast hits to 71 proteins in 26 species: Archae - 0; Bac...	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004114	THUMP domain	PFAM	PF02926	THUMP	coord: 236..348 e-value: 8.3E-6 score: 26.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 9..32
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 155..184
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..32
None	No IPR available	PANTHER	PTHR13452:SF13	OS02G0672400 PROTEIN	coord: 132..388 coord: 20..89
None	No IPR available	SUPERFAMILY	143437	THUMP domain-like	coord: 276..347
IPR040183	THUMP domain-containing protein 1-like	PANTHER	PTHR13452	THUMP DOMAIN CONTAINING PROTEIN 1-RELATED	coord: 132..388 coord: 20..89

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0018871.2	PI0018871.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006400	tRNA modification
molecular_function	GO:0003723	RNA binding