|
|
Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. ATGTTAGTTGACTTCACGTCGTCTCTCGAATCAAGAGCAGGTGATTCAAGAAGGGGTGTGATAGTAGCCATTGGTGTAGCAGGCGAGACAAGCTTCTATGTGCAACATAATGAAAACCATCCTAAAGCCAGGATGCAAAGCGAACATGAAAACATCTTTGACTTCATTGGAGCAACATTCTGTAAGCCCATCAACGGGAATTTCGAGCAAGTGCTCAACATTCAAGCCGACATGCTCCTGCACATTCAGACTACGCAAGACAATCTTGTGCAAATGCGCAATGAACTCACAACCACCCAGCATTTCGTGCATAACATTGACACTAGGCAAGATGGCTTGGAAAAAAAATTAGGAAAAATCATGGTGAAGCAAGTCGAGATGGCTTCCTCCCTTTCAATTCTTACTTCGCTGGTCATTTCGCAATCTGAGCCAAACAAAAGATGCAAAGCTTCAAAAGAATTGAGAGTGAAAGTAAGTGGTTGCGAAAAGACAAACTCTATTGTGGAATATGGATGA mRNA sequence ATGTTAGTTGACTTCACGTCGTCTCTCGAATCAAGAGCAGGTGATTCAAGAAGGGGTGTGATAGTAGCCATTGGTGTAGCAGGCGAGACAAGCTTCTATGTGCAACATAATGAAAACCATCCTAAAGCCAGGATGCAAAGCGAACATGAAAACATCTTTGACTTCATTGGAGCAACATTCTGTAAGCCCATCAACGGGAATTTCGAGCAAGTGCTCAACATTCAAGCCGACATGCTCCTGCACATTCAGACTACGCAAGACAATCTTGTGCAAATGCGCAATGAACTCACAACCACCCAGCATTTCGTGCATAACATTGACACTAGGCAAGATGGCTTGGAAAAAAAATTAGGAAAAATCATGGTGAAGCAAGTCGAGATGGCTTCCTCCCTTTCAATTCTTACTTCGCTGGTCATTTCGCAATCTGAGCCAAACAAAAGATGCAAAGCTTCAAAAGAATTGAGAGTGAAAGTAAGTGGTTGCGAAAAGACAAACTCTATTGTGGAATATGGATGA Coding sequence (CDS) ATGTTAGTTGACTTCACGTCGTCTCTCGAATCAAGAGCAGGTGATTCAAGAAGGGGTGTGATAGTAGCCATTGGTGTAGCAGGCGAGACAAGCTTCTATGTGCAACATAATGAAAACCATCCTAAAGCCAGGATGCAAAGCGAACATGAAAACATCTTTGACTTCATTGGAGCAACATTCTGTAAGCCCATCAACGGGAATTTCGAGCAAGTGCTCAACATTCAAGCCGACATGCTCCTGCACATTCAGACTACGCAAGACAATCTTGTGCAAATGCGCAATGAACTCACAACCACCCAGCATTTCGTGCATAACATTGACACTAGGCAAGATGGCTTGGAAAAAAAATTAGGAAAAATCATGGTGAAGCAAGTCGAGATGGCTTCCTCCCTTTCAATTCTTACTTCGCTGGTCATTTCGCAATCTGAGCCAAACAAAAGATGCAAAGCTTCAAAAGAATTGAGAGTGAAAGTAAGTGGTTGCGAAAAGACAAACTCTATTGTGGAATATGGATGA Protein sequence MLVDFTSSLESRAGDSRRGVIVAIGVAGETSFYVQHNENHPKARMQSEHENIFDFIGATFCKPINGNFEQVLNIQADMLLHIQTTQDNLVQMRNELTTTQHFVHNIDTRQDGLEKKLGKIMVKQVEMASSLSILTSLVISQSEPNKRCKASKELRVKVSGCEKTNSIVEYG
Homology
BLAST of PI0018841 vs. ExPASy TrEMBL
Match: A0A5A7TBI3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold306G00480 PE=4 SV=1) HSP 1 Score: 64.7 bits (156), Expect = 4.3e-07 Identity = 34/81 (41.98%), Postives = 48/81 (59.26%), Query Frame = 0
Query: 28 GETSFYVQHNENHPKARMQSEHENIFDFIGATFCKPINGNFEQVLNIQADMLLHIQTTQD 87
GETS V+HN+ PKA QS+ E+IF++ G T CKP+ +FEQVL + L + + +
Sbjct: 6 GETSSSVRHNDYPPKATTQSDGEDIFEYTGDTVCKPMLDHFEQVLTNRQTCLRTLMSPRT 65
Query: 88 NLVQMRNELTTTQHFVHNIDT 109
+ T + FVHNIDT
Sbjct: 66 LALSYAMSSLTPKRFVHNIDT 86
BLAST of PI0018841 vs. NCBI nr
Match: KAA0040824.1 (hypothetical protein E6C27_scaffold333G00440 [Cucumis melo var. makuwa] >TYK17800.1 hypothetical protein E5676_scaffold306G00480 [Cucumis melo var. makuwa]) HSP 1 Score: 64.7 bits (156), Expect = 8.9e-07 Identity = 34/81 (41.98%), Postives = 48/81 (59.26%), Query Frame = 0
Query: 28 GETSFYVQHNENHPKARMQSEHENIFDFIGATFCKPINGNFEQVLNIQADMLLHIQTTQD 87
GETS V+HN+ PKA QS+ E+IF++ G T CKP+ +FEQVL + L + + +
Sbjct: 6 GETSSSVRHNDYPPKATTQSDGEDIFEYTGDTVCKPMLDHFEQVLTNRQTCLRTLMSPRT 65
Query: 88 NLVQMRNELTTTQHFVHNIDT 109
+ T + FVHNIDT
Sbjct: 66 LALSYAMSSLTPKRFVHNIDT 86
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A5A7TBI3 | 4.3e-07 | 41.98 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| KAA0040824.1 | 8.9e-07 | 41.98 | hypothetical protein E6C27_scaffold333G00440 [Cucumis melo var. makuwa] >TYK1780... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
Relationships
The following mRNA feature(s) are a part of this gene:
|
